Miyakogusa Predicted Gene
- Lj0g3v0110839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0110839.1 tr|G7LB59|G7LB59_MEDTR Aspartic proteinase-like
protein OS=Medicago truncatula GN=MTR_8g075090 PE=3 ,49.54,2e-19,no
description,Peptidase aspartic, catalytic; seg,NULL; Acid
proteases,Peptidase aspartic; CHLOROPLA,CUFF.6400.1
(107 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35880.1 | Symbols: | Eukaryotic aspartyl protease family pr... 136 4e-33
AT2G17760.1 | Symbols: | Eukaryotic aspartyl protease family pr... 101 1e-22
AT5G10080.1 | Symbols: | Eukaryotic aspartyl protease family pr... 89 4e-19
AT3G51360.1 | Symbols: | Eukaryotic aspartyl protease family pr... 88 1e-18
AT3G51350.1 | Symbols: | Eukaryotic aspartyl protease family pr... 71 1e-13
AT3G51340.1 | Symbols: | Eukaryotic aspartyl protease family pr... 66 5e-12
AT3G51330.1 | Symbols: | Eukaryotic aspartyl protease family pr... 65 1e-11
AT4G33490.2 | Symbols: | Eukaryotic aspartyl protease family pr... 52 1e-07
AT4G33490.1 | Symbols: | Eukaryotic aspartyl protease family pr... 52 1e-07
AT3G02740.1 | Symbols: | Eukaryotic aspartyl protease family pr... 50 3e-07
>AT4G35880.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr4:16993339-16995721 FORWARD LENGTH=524
Length = 524
Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 1 MVALDTGSDLFWVPCDCVRCASLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLCMNHNQ 60
MVALDTGSDLFWVPCDC +CA + Y S+F+L KKVTCN+SLC NQ
Sbjct: 121 MVALDTGSDLFWVPCDCGKCAPTEGATYASEFELSIYNPKVSTTNKKVTCNNSLCAQRNQ 180
Query: 61 CHGAFSNCPYMVSYASAETSTSGILVEDVLHFT--DGDNHHIEANVMFG 107
C G FS CPYMVSY SA+TSTSGIL+EDV+H T D + +EA V FG
Sbjct: 181 CLGTFSTCPYMVSYVSAQTSTSGILMEDVMHLTTEDKNPERVEAYVTFG 229
>AT2G17760.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr2:7713488-7716269 FORWARD LENGTH=513
Length = 513
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 1 MVALDTGSDLFWVPCDCVRCASLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLCMNHNQ 60
MVALDTGSDLFW+PCDC C GS DL KV CNS+LC ++
Sbjct: 118 MVALDTGSDLFWLPCDCTNCVRELKAPGGSSLDLNIYSPNASSTSTKVPCNSTLCTRGDR 177
Query: 61 CHGAFSNCPYMVSYASAETSTSGILVEDVLHFTDGDN--HHIEANVMFG 107
C S+CPY + Y S TS++G+LVEDVLH D I A V FG
Sbjct: 178 CASPESDCPYQIRYLSNGTSSTGVLVEDVLHLVSNDKSSKAIPARVTFG 226
>AT5G10080.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr5:3150843-3153380 FORWARD LENGTH=528
Length = 528
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 1 MVALDTGSDLFWVPCDCVRCASLDSTAYGS--DFDLXXXXXXXXXXXKKVTCNSSLCMNH 58
+VALDTGS+L W+PC+CV+CA L ST Y S DL K C+ LC +
Sbjct: 114 LVALDTGSNLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLCDSA 173
Query: 59 NQCHGAFSNCPYMVSYASAETSTSGILVEDVLHFTDGDNHH-------IEANVMFG 107
+ C CPY V+Y S TS+SG+LVED+LH T N+ ++A V+ G
Sbjct: 174 SDCESPKEQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIG 229
>AT3G51360.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr3:19064294-19066560 REVERSE LENGTH=488
Length = 488
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 1 MVALDTGSDLFWVPCDC-VRCASLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLCMNHN 59
+VALDTGSDLFW+PC+C C T G L KVTCNS+LC N
Sbjct: 103 LVALDTGSDLFWLPCNCNSTCVRSMETDQGERIKLNIYNPSKSKSSSKVTCNSTLCALRN 162
Query: 60 QCHGAFSNCPYMVSYASAETSTSGILVEDVLHFTDGDNHHIEANVMFG 107
+C S+CPY + Y S + ++G+LVEDV+H + + +A + FG
Sbjct: 163 RCISPVSDCPYRIRYLSPGSKSTGVLVEDVIHMSTEEGEARDARITFG 210
>AT3G51350.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr3:19060485-19063248 REVERSE LENGTH=528
Length = 528
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 1 MVALDTGSDLFWVPCDC-VRCA-SLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLCMNH 58
+VALDTGSDLFW+PC+C C L+ L + C+ C
Sbjct: 116 LVALDTGSDLFWLPCNCGTTCIRDLEDIGVPQSVPLNLYTPNASTTSSSIRCSDKRCFGS 175
Query: 59 NQCHGAFSNCPYMVSYASAETSTSGILVEDVLHFTDGDNH--HIEANVMFG 107
+C S CPY +SY+++ T T G L++DVLH D + ++ANV G
Sbjct: 176 KKCSSPSSICPYQISYSNS-TGTKGTLLQDVLHLATEDENLTPVKANVTLG 225
>AT3G51340.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr3:19057013-19059788 REVERSE LENGTH=530
Length = 530
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 1 MVALDTGSDLFWVPCDC-VRCA-SLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLCMNH 58
+VALDTGSDLFW+PC+C C L + L + C+ C
Sbjct: 117 LVALDTGSDLFWLPCNCGTTCIHDLKDARFSESVPLNLYTPNASTTSSSIRCSDKRCFGS 176
Query: 59 NQCHGAFSNCPYMVSYASAETSTSGILVEDVLHFT--DGDNHHIEANVMFG 107
+C S CPY ++ S+ T T+G L++DVLH D D + ANV G
Sbjct: 177 GKCSSPESICPYQIAL-SSNTVTTGTLLQDVLHLVTEDEDLKPVNANVTLG 226
>AT3G51330.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr3:19053480-19056152 REVERSE LENGTH=529
Length = 529
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 1 MVALDTGSDLFWVPCDCVRCASLDSTAYG--SDFDLXXXXXXXXXXXKKVTCNSSLCMNH 58
+VALDTGSDLFW+PC+C D G L + C+ C
Sbjct: 116 LVALDTGSDLFWLPCNCGSTCIRDLKEVGLSQSRPLNLYSPNTSSTSSSIRCSDDRCFGS 175
Query: 59 NQCHGAFSNCPYMVSYASAETSTSGILVEDVLHFTDGDN--HHIEANVMFG 107
++C S+CPY + Y S +T T+G L EDVLH D ++AN+ G
Sbjct: 176 SRCSSPASSCPYQIQYLSKDTFTTGTLFEDVLHLVTEDEGLEPVKANITLG 226
>AT4G33490.2 | Symbols: | Eukaryotic aspartyl protease family
protein | chr4:16108781-16110679 REVERSE LENGTH=425
Length = 425
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 22/100 (22%)
Query: 4 LDTGSDLFWVPCD--CVRCASLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLC----MN 57
LDTGSDL W+ CD CVRC Y DL + CN LC +N
Sbjct: 77 LDTGSDLTWLQCDAPCVRCLEAPHPLYQPSSDL-------------IPCNDPLCKALHLN 123
Query: 58 HNQCHGAFSNCPYMVSYASAETSTSGILVEDV--LHFTDG 95
NQ C Y V YA +S G+LV DV +++T G
Sbjct: 124 SNQRCETPEQCDYEVEYADGGSSL-GVLVRDVFSMNYTQG 162
>AT4G33490.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr4:16108928-16110670 REVERSE LENGTH=401
Length = 401
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 22/100 (22%)
Query: 4 LDTGSDLFWVPCD--CVRCASLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLC----MN 57
LDTGSDL W+ CD CVRC Y DL + CN LC +N
Sbjct: 74 LDTGSDLTWLQCDAPCVRCLEAPHPLYQPSSDL-------------IPCNDPLCKALHLN 120
Query: 58 HNQCHGAFSNCPYMVSYASAETSTSGILVEDV--LHFTDG 95
NQ C Y V YA +S G+LV DV +++T G
Sbjct: 121 SNQRCETPEQCDYEVEYADGGSSL-GVLVRDVFSMNYTQG 159
>AT3G02740.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr3:590561-593089 FORWARD LENGTH=488
Length = 488
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 2 VALDTGSDLFWVPC-DCVRCASLDSTAYGSDFDLXXXXXXXXXXXKKVTCNSSLCMNHNQ 60
V +DTGSD+ WV C C+RC + +D+ K V+C+ + C NQ
Sbjct: 100 VQVDTGSDILWVNCAGCIRCPRKSDLVELTPYDV-----DASSTAKSVSCSDNFCSYVNQ 154
Query: 61 ---CHGAFSNCPYMVSYASAETSTSGILVEDVLHF 92
CH S C Y++ Y +ST+G LV+DV+H
Sbjct: 155 RSECHSG-STCQYVIMYGDG-SSTNGYLVKDVVHL 187