Miyakogusa Predicted Gene
- Lj0g3v0110109.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0110109.1 Non Chatacterized Hit- tr|I1JDA7|I1JDA7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2789
PE=,70.85,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.6353.1
(678 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 715 0.0
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 211 1e-54
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 189 6e-48
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 189 6e-48
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 189 6e-48
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 189 7e-48
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 187 2e-47
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 187 3e-47
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 185 1e-46
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 183 4e-46
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 183 4e-46
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 183 4e-46
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 181 1e-45
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 181 1e-45
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 180 4e-45
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 180 4e-45
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 3e-44
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 175 1e-43
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 172 6e-43
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 172 9e-43
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 172 1e-42
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 171 2e-42
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 166 5e-41
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 164 3e-40
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 164 3e-40
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 162 5e-40
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 162 8e-40
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 161 2e-39
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 160 4e-39
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 159 6e-39
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 159 6e-39
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 158 1e-38
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 157 2e-38
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 4e-38
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 154 2e-37
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 154 3e-37
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 153 5e-37
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 148 1e-35
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 147 2e-35
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 147 2e-35
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 147 3e-35
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 147 3e-35
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 147 3e-35
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 146 6e-35
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 144 2e-34
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 144 2e-34
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 143 4e-34
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 142 6e-34
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 142 9e-34
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 3e-33
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 139 7e-33
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 134 2e-31
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 134 2e-31
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 130 3e-30
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 130 3e-30
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 130 3e-30
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 130 4e-30
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 130 5e-30
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 128 1e-29
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 128 1e-29
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 126 5e-29
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 9e-29
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 124 1e-28
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 124 2e-28
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 124 3e-28
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 124 3e-28
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 123 4e-28
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 121 2e-27
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 120 3e-27
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 115 8e-26
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 115 1e-25
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 114 2e-25
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 114 2e-25
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 110 3e-24
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 107 3e-23
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 105 7e-23
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 103 4e-22
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 98 2e-20
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 57 4e-08
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 55 2e-07
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 54 4e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 51 2e-06
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/580 (65%), Positives = 437/580 (75%), Gaps = 29/580 (5%)
Query: 57 FPFLTPSNPITVLPRFRPLSSIAAPEVA-------AEPDQMKHSMLLERLRSRHLKDSAK 109
FPFL P FRPL S AA + +PDQ+KH++LLERLR RHLK+SAK
Sbjct: 27 FPFLRLHKP-RFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAK 85
Query: 110 TPEAKNPPXXXXXXXXXXXXXXXXXXXXXFEELGIGDEVMGSVREMGIEVPTEIQCIGVP 169
P+ + P F+ELG+ +EVMG+++E+ IEVPTEIQCIG+P
Sbjct: 86 PPQQR-PSSVVGVEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIP 144
Query: 170 AVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQ 229
AV+E KSVVLGSHTGSGKTLAYLLP+VQL+R DE G KP+RPR VVLCPTRELSEQ
Sbjct: 145 AVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQ 204
Query: 230 VFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDI 289
V+RVAKSISHHARFR +VSGG RIRPQEDSLN+ IDMVVGTPGRILQHIEEGNMVYGDI
Sbjct: 205 VYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDI 264
Query: 290 KYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEF 349
YLVLDEADTMFD+GFGP+IRKF+ PL R+ K+ GFQTVLVTATMT AVQKLVDEEF
Sbjct: 265 AYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEF 324
Query: 350 QGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSR 409
QGIEHLRTSTLHKKI+ ARHDFIKLSG E+KL+ALLQVLEPSLAKG++VMVFCNTL+SSR
Sbjct: 325 QGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSR 384
Query: 410 AVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDLDVDHVV 469
AVDHYL EN ISTVNYHGEVPAEQRVENLKKFK + DCPTLVCTDLAARGLDLDVDHVV
Sbjct: 385 AVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLDVDHVV 444
Query: 470 MFDFPRNSIDYLHRTGRTARMGAKGKVTSLVAKKDLNLAAKIEEAIRKNESLEGITKESV 529
MFDFP+NSIDYLHRTGRTARMGAKGKVTSLV++KD LAA+IEEA+R NESLE +T ++V
Sbjct: 445 MFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDNV 504
Query: 530 RKDITRTQITELRGKNKNLVR-VSK---VKDKSGGHASSGNSRAGMQSGK---------- 575
R+D RT IT+ +G++ +R VSK +DK + S G +
Sbjct: 505 RRDAARTHITQEKGRSVKQIREVSKQRNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKP 564
Query: 576 ---GSPPAKSVKKGINVSKS-GDR--ACSGNAGSGVKSGK 609
SPP KS K + K+ G R A G GS + GK
Sbjct: 565 RKASSPPEKSSKPKRKILKTVGSRSIAARGKTGSDRRPGK 604
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 37/404 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F E+G +++M +++E + P IQ + V++GKS ++ +GSGKTLAYL+P++Q
Sbjct: 376 FAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQR 435
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHA-RFRCTMVSGGGRIRPQ 257
LR +E P PR +VL PT EL+ QV +SIS FR +V+GG R R Q
Sbjct: 436 LREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQ 495
Query: 258 EDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMF-DKGFGPDIRKFIGPL 316
++L +D+++ TPGR + EG + +++ +LDE D +F D F ++ I
Sbjct: 496 LENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLIN-- 553
Query: 317 KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDF-IKLS 375
S + Q + VTAT+ + + E F E + +H ++S A +F + S
Sbjct: 554 ------SSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVH-RVSNALEEFLVDCS 606
Query: 376 GS-----------ENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYL-----DENL 419
G +NK ALLQ++E + ++ ++FCN +++ R V++ E
Sbjct: 607 GDDNAEKTPETAFQNKKTALLQIMEENPV--SKTIIFCNKIETCRKVENIFKRVDRKERQ 664
Query: 420 ISTVNYHGEVPAEQRVENLKKFKSDN--EDCPTLVCTDLAARGLDLD-VDHVVMFDFPRN 476
+ + +H + E R+ N+++F S E+ LVCTD A+RG+D VDHVV+FDFPR+
Sbjct: 665 LHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRD 724
Query: 477 SIDYLHRTGRTARMG-AKGKVTSLVAKKDLNLAAKIEEAIRKNE 519
+Y+ R GRTAR KGK V K + LA +I I +NE
Sbjct: 725 PSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRI---IERNE 765
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 189/385 (49%), Gaps = 39/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLP---L 195
FE G E++ V G PT IQ P ++G+ +V + TGSGKTL YL+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 196 VQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
+Q +R D ++ P +VL PTREL+ Q+ A +R CT + GG
Sbjct: 220 LQRIRNDSRMG--------PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKG 271
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
PQ L D+VV TPGR+ +E + I YLVLDEAD M D GF P IRK +
Sbjct: 272 PQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKE 331
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHD 370
+ + QT++ TAT V+K LV+ I ++ +K I T +
Sbjct: 332 IPTKR--------QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSI-TQHIE 382
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENL---ISTVNYHG 427
+ + +L+ +L+ EP G++V++FC+T R D L NL HG
Sbjct: 383 VVAPMEKQRRLEQILRSQEP----GSKVIIFCST---KRMCDQ-LTRNLTRQFGAAAIHG 434
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
+ +R L +F+S P LV TD+AARGLD+ D+ VV +DFP DY+HR GR
Sbjct: 435 DKSQPERDNVLNQFRSGR--TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGR 492
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKI 511
T R GA G+ + +D A+ +
Sbjct: 493 TGRAGATGQAFTFFGDQDSKHASDL 517
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 189/385 (49%), Gaps = 39/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLP---L 195
FE G E++ V G PT IQ P ++G+ +V + TGSGKTL YL+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 196 VQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
+Q +R D ++ P +VL PTREL+ Q+ A +R CT + GG
Sbjct: 220 LQRIRNDSRMG--------PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKG 271
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
PQ L D+VV TPGR+ +E + I YLVLDEAD M D GF P IRK +
Sbjct: 272 PQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKE 331
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHD 370
+ + QT++ TAT V+K LV+ I ++ +K I T +
Sbjct: 332 IPTKR--------QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSI-TQHIE 382
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENL---ISTVNYHG 427
+ + +L+ +L+ EP G++V++FC+T R D L NL HG
Sbjct: 383 VVAPMEKQRRLEQILRSQEP----GSKVIIFCST---KRMCDQ-LTRNLTRQFGAAAIHG 434
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
+ +R L +F+S P LV TD+AARGLD+ D+ VV +DFP DY+HR GR
Sbjct: 435 DKSQPERDNVLNQFRSGR--TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGR 492
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKI 511
T R GA G+ + +D A+ +
Sbjct: 493 TGRAGATGQAFTFFGDQDSKHASDL 517
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 189/385 (49%), Gaps = 39/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLP---L 195
FE G E++ V G PT IQ P ++G+ +V + TGSGKTL YL+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 196 VQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
+Q +R D ++ P +VL PTREL+ Q+ A +R CT + GG
Sbjct: 220 LQRIRNDSRMG--------PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKG 271
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
PQ L D+VV TPGR+ +E + I YLVLDEAD M D GF P IRK +
Sbjct: 272 PQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKE 331
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHD 370
+ + QT++ TAT V+K LV+ I ++ +K I T +
Sbjct: 332 IPTKR--------QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSI-TQHIE 382
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENL---ISTVNYHG 427
+ + +L+ +L+ EP G++V++FC+T R D L NL HG
Sbjct: 383 VVAPMEKQRRLEQILRSQEP----GSKVIIFCST---KRMCDQ-LTRNLTRQFGAAAIHG 434
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
+ +R L +F+S P LV TD+AARGLD+ D+ VV +DFP DY+HR GR
Sbjct: 435 DKSQPERDNVLNQFRSGR--TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGR 492
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKI 511
T R GA G+ + +D A+ +
Sbjct: 493 TGRAGATGQAFTFFGDQDSKHASDL 517
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 189/385 (49%), Gaps = 39/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLP---L 195
FE G E++ V G PT IQ P ++G+ +V + TGSGKTL YL+P
Sbjct: 160 FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH 219
Query: 196 VQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
+Q +R D ++ P +VL PTREL+ Q+ A +R CT + GG
Sbjct: 220 LQRIRNDSRMG--------PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKG 271
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
PQ L D+VV TPGR+ +E + I YLVLDEAD M D GF P IRK +
Sbjct: 272 PQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKE 331
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHD 370
+ + QT++ TAT V+K LV+ I ++ +K I T +
Sbjct: 332 IPTKR--------QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSI-TQHIE 382
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENL---ISTVNYHG 427
+ + +L+ +L+ EP G++V++FC+T R D L NL HG
Sbjct: 383 VVAPMEKQRRLEQILRSQEP----GSKVIIFCST---KRMCDQ-LTRNLTRQFGAAAIHG 434
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
+ +R L +F+S P LV TD+AARGLD+ D+ VV +DFP DY+HR GR
Sbjct: 435 DKSQPERDNVLNQFRSGR--TPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGR 492
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKI 511
T R GA G+ + +D A+ +
Sbjct: 493 TGRAGATGQAFTFFGDQDSKHASDL 517
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 213/414 (51%), Gaps = 41/414 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE LG+ + + + +E+G+ PT +Q VP +L G+ V+ + TGSGKT A+ LP++
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
L D P A+V+ PTREL+ Q+ K++ RC+++ GG + Q
Sbjct: 120 LAED---------PYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQT 170
Query: 259 DSLNHPIDMVVGTPGRI---LQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
SL +V+ TPGRI L++ + V+ K+LVLDEAD + D GF ++R
Sbjct: 171 MSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQC 230
Query: 316 L-KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEE------FQGIEHLRTSTLHKKISTAR 368
L K R QT+L +ATMT+ +Q L++ ++ E L+T + T
Sbjct: 231 LPKSR---------QTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKT------VDTLT 275
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNR-VMVFCNTLDSSRAVDHYLDENLISTVNYHG 427
FI + K L+ +L KG R M+F +T + + + LDE + + H
Sbjct: 276 QQFI-FEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHS 334
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
R+ L KFKS P L+ TD+A+RGLD+ VD V+ +D PR+ DY+HR GR
Sbjct: 335 LNSQSMRLSALSKFKSGK--VPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGR 392
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKIEEAIRKNESLEGITKESVRKDITRTQITE 540
TAR G G S++ + D+ L KIEE + K +E K+ + + T++++
Sbjct: 393 TARAGRGGLAVSIITETDVKLIHKIEEEVGKK--MEPYNKKVITDSLEVTKVSK 444
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 192/380 (50%), Gaps = 16/380 (4%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ++G D V+ V++ G PT IQ G P ++G+ ++ + TGSGKTL+YLLP +
Sbjct: 101 FRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVH 160
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ +L P +VL PTREL+ Q+ + A ++ + T + GG PQ
Sbjct: 161 V----NAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQV 216
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L +++V+ TPGR++ +E N + YLVLDEAD M D GF P IRK + ++
Sbjct: 217 RDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRP 276
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
QT+ +AT V++L + + + K + A + +
Sbjct: 277 DR--------QTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISES 328
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENL 438
K + L+++LE + G+R++VF +T + L + ++ HG+ +R L
Sbjct: 329 QKYNKLVKLLE-DIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 387
Query: 439 KKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVT 497
+F+S P + TD+AARGLD+ DV +V+ +DFP + DY+HR GRT R GAKG
Sbjct: 388 SEFRSGK--SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAY 445
Query: 498 SLVAKKDLNLAAKIEEAIRK 517
+ + A ++ +++
Sbjct: 446 TFFTVANARFAKELTNILQE 465
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 207/407 (50%), Gaps = 28/407 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F E+ +G+ + ++R PT +Q +P +LEG+ ++ + TGSGKT A+ P++
Sbjct: 161 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISG 220
Query: 199 LRRDEQLNGVLMKPK-----RPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGR 253
+ +D+ + +P+ P AV+L PTREL+ Q+ AK S+ + + GG
Sbjct: 221 IMKDQHVQ----RPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTP 276
Query: 254 IRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFI 313
I Q L +D++V TPGR+ +E + I++L LDEAD M D GF P IRK +
Sbjct: 277 INQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIV 336
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEE-----FQGIEHLRTSTLHKKISTAR 368
+ G+ QT+L +AT +Q+L + F + + +ST + R
Sbjct: 337 ---EQMDMPPRGVR-QTLLFSATFPREIQRLAADFLANYIFLAVGRVGSST---DLIVQR 389
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNR--VMVFCNTLDSSRAVDHYLDENLISTVNYH 426
+F+ S + L LL + +G + +VF T + +++++L N + H
Sbjct: 390 VEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIH 449
Query: 427 GEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTG 485
G+ ++R LK FKS P LV TD+AARGLD+ V HVV FD P + DY+HR G
Sbjct: 450 GDRTQQEREVALKAFKSGR--TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG 507
Query: 486 RTARMGAKGKVTSLVAKKDLNLAAKIEEAIRK--NESLEGITKESVR 530
RT R G G T+ + +LA + E +++ E E +T+ + R
Sbjct: 508 RTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYASR 554
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 205/405 (50%), Gaps = 26/405 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ++ +GD + ++R PT +Q +P +L + ++ + TGSGKT A+ P++
Sbjct: 153 FADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISG 212
Query: 199 LRRDEQLNGVLMKPK-----RPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGR 253
+ +D+ + +P+ P AV+L PTREL+ Q+ AK S+ + + GG
Sbjct: 213 IMKDQHVE----RPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTP 268
Query: 254 IRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFI 313
I Q L D++V TPGR+ +E + I++L LDEAD M D GF P IRK +
Sbjct: 269 IHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIV 328
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEE-----FQGIEHLRTSTLHKKISTAR 368
+ G+ QT+L +AT + +Q+L + F + + +ST + T R
Sbjct: 329 ---EQMDMPPRGVR-QTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSST---DLITQR 381
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGE 428
+F++ S + L LL + K + +VF T + ++++L N + HG+
Sbjct: 382 VEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
Query: 429 VPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRT 487
++R L+ FK+ P LV TD+AARGLD+ V HVV FD P + DY+HR GRT
Sbjct: 442 RTQQEREVALRSFKTGR--TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 499
Query: 488 ARMGAKGKVTSLVAKKDLNLAAKIEEAIRK--NESLEGITKESVR 530
R G G T+ + + LA + E +++ E E +T+ + R
Sbjct: 500 GRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASR 544
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 205/405 (50%), Gaps = 26/405 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ++ +GD + ++R PT +Q +P +L + ++ + TGSGKT A+ P++
Sbjct: 153 FADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISG 212
Query: 199 LRRDEQLNGVLMKPK-----RPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGR 253
+ +D+ + +P+ P AV+L PTREL+ Q+ AK S+ + + GG
Sbjct: 213 IMKDQHVE----RPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTP 268
Query: 254 IRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFI 313
I Q L D++V TPGR+ +E + I++L LDEAD M D GF P IRK +
Sbjct: 269 IHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIV 328
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEE-----FQGIEHLRTSTLHKKISTAR 368
+ G+ QT+L +AT + +Q+L + F + + +ST + T R
Sbjct: 329 ---EQMDMPPRGVR-QTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSST---DLITQR 381
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGE 428
+F++ S + L LL + K + +VF T + ++++L N + HG+
Sbjct: 382 VEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
Query: 429 VPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRT 487
++R L+ FK+ P LV TD+AARGLD+ V HVV FD P + DY+HR GRT
Sbjct: 442 RTQQEREVALRSFKTGR--TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 499
Query: 488 ARMGAKGKVTSLVAKKDLNLAAKIEEAIRK--NESLEGITKESVR 530
R G G T+ + + LA + E +++ E E +T+ + R
Sbjct: 500 GRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASR 544
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 205/405 (50%), Gaps = 26/405 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ++ +GD + ++R PT +Q +P +L + ++ + TGSGKT A+ P++
Sbjct: 153 FADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISG 212
Query: 199 LRRDEQLNGVLMKPK-----RPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGR 253
+ +D+ + +P+ P AV+L PTREL+ Q+ AK S+ + + GG
Sbjct: 213 IMKDQHVE----RPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTP 268
Query: 254 IRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFI 313
I Q L D++V TPGR+ +E + I++L LDEAD M D GF P IRK +
Sbjct: 269 IHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIV 328
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEE-----FQGIEHLRTSTLHKKISTAR 368
+ G+ QT+L +AT + +Q+L + F + + +ST + T R
Sbjct: 329 ---EQMDMPPRGVR-QTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSST---DLITQR 381
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGE 428
+F++ S + L LL + K + +VF T + ++++L N + HG+
Sbjct: 382 VEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
Query: 429 VPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRT 487
++R L+ FK+ P LV TD+AARGLD+ V HVV FD P + DY+HR GRT
Sbjct: 442 RTQQEREVALRSFKTGR--TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 499
Query: 488 ARMGAKGKVTSLVAKKDLNLAAKIEEAIRK--NESLEGITKESVR 530
R G G T+ + + LA + E +++ E E +T+ + R
Sbjct: 500 GRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASR 544
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 188/383 (49%), Gaps = 35/383 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE G+ E++ + G PT IQ P L+ + +V + TGSGKTL YL+P L
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFIL 496
Query: 199 LR--RDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRP 256
LR R++ NG P ++L PTREL+ Q+ A +R CT + GG P
Sbjct: 497 LRHCRNDSRNG-------PTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGP 549
Query: 257 QEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL 316
Q L D+VV TPGR+ +E + + + LVLDEAD M D GF P IRK + +
Sbjct: 550 QLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEI 609
Query: 317 KHRSSKSEGLGFQTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHDF 371
R QT++ TAT V+K LV+ I + +K I+ +
Sbjct: 610 PPRR--------QTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAIT----QY 657
Query: 372 IKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDE--NLISTVNYHGEV 429
+++ K L Q+L S +G++V++FC+T R DH V HG+
Sbjct: 658 VEVVPQMEKERRLEQILR-SQERGSKVIIFCST---KRLCDHLARSVGRHFGAVVIHGDK 713
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
+R L +F+S + C L+ TD+AARGLD+ D+ V+ +DFP DY+HR GRT
Sbjct: 714 TQGERDWVLNQFRS-GKSC-VLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTG 771
Query: 489 RMGAKGKVTSLVAKKDLNLAAKI 511
R GA G + ++D A +
Sbjct: 772 RAGATGVAFTFFTEQDWKYAPDL 794
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 189/385 (49%), Gaps = 39/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE G+ +E++ V G P+ IQ P ++ + +V + TGSGKTL YL+P
Sbjct: 163 FEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH 222
Query: 199 LRR---DEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
L+R D ++ P +VL PTREL+ Q+ A ++ C + GG
Sbjct: 223 LQRIHNDSRMG--------PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKG 274
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
PQ + +D+VV TPGR+ +E + + YLVLDEAD M D GF P IRK +
Sbjct: 275 PQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNE 334
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHD 370
+ + QT++ TAT V+K LV+ I ++ +K I+
Sbjct: 335 VPTKR--------QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEV 386
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVN---YHG 427
+ ++L+ +L+ EP G+++++FC+T R D L NL T HG
Sbjct: 387 LAPME-KHSRLEQILRSQEP----GSKIIIFCST---KRMCDQ-LARNLTRTFGAAAIHG 437
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
+ +R + L +F+S P LV TD+AARGLD+ D+ VV +DFP DY+HR GR
Sbjct: 438 DKSQAERDDVLNQFRSGR--TPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGR 495
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKI 511
T R GA G + +D A+ +
Sbjct: 496 TGRAGATGLAYTFFGDQDAKHASDL 520
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 191/380 (50%), Gaps = 16/380 (4%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F++ D ++ ++ ++G PT IQ G P L+G+ ++ + TGSGKTLAYLLP +
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ +L + P ++L PTREL+ Q+ ++ + R T + GG PQ
Sbjct: 227 VSAQPRLG----QDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQI 282
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L +++V+ TPGR++ +E + + YLVLDEAD M D GF P IRK + ++
Sbjct: 283 RDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP 342
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
QT+L +AT V+ L + + + K + + + I++ +
Sbjct: 343 DR--------QTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTP 394
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENL 438
K + LL +L+ L G+++++F T V L + + HG+ +R L
Sbjct: 395 EKYNRLLTLLK-QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVL 453
Query: 439 KKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVT 497
+FKS P + TD+AARGLD+ D+ VV +DFP DY+HR GRT R GAKG
Sbjct: 454 AEFKSGR--SPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAF 511
Query: 498 SLVAKKDLNLAAKIEEAIRK 517
+ + A ++ + +++
Sbjct: 512 TFFTHDNAKFARELVKILQE 531
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 193/380 (50%), Gaps = 27/380 (7%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPL-VQ 197
FE+ G ++M ++++ E PT IQC +P VL G+ V+ + TGSGKT A++LP+ V
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 198 LLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQ 257
++ + E L + + P V+ PTREL+ Q+F AK S R + V GG Q
Sbjct: 290 IMDQPE-----LQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQ 344
Query: 258 EDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLK 317
L ++VV TPGR++ ++ + YLVLDEAD MFD GF P +R +G ++
Sbjct: 345 FKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIR 404
Query: 318 HRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIK---- 373
QT+L +ATM V+KL E + +R + ++ A D +
Sbjct: 405 PDR--------QTLLFSATMPWKVEKLAREILS--DPIRVTV--GEVGMANEDITQVVNV 452
Query: 374 LSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQ 433
+ KL LL+ L P + V+VF + + ++ L N HG+
Sbjct: 453 IPSDAEKLPWLLEKL-PGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQAS 511
Query: 434 RVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGA 492
R+E L+KFKS L+ TD+AARGLD+ + VV +D ++ ++HR GRT R G
Sbjct: 512 RMETLQKFKSGVHHV--LIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGD 569
Query: 493 K-GKVTSLVAKKDLNLAAKI 511
+ G +LV +++ A ++
Sbjct: 570 RDGVAYTLVTQREARFAGEL 589
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 202/391 (51%), Gaps = 32/391 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ELG+ +E++ + +G + P++IQ +P LEGK V+ + TGSGKT A+ +P++Q
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 199 LRRDEQLNGVL-MKPKRPR-------AVVLCPTRELSEQVFRVAKSISHHARFRCTMVSG 250
L L V +PK+ R A VL PTREL+ Q+ +++ RC ++ G
Sbjct: 71 L-----LEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVG 125
Query: 251 GGRIRPQEDSLNHPIDMVVGTPGRILQHIEEGN-MVYGDIKYLVLDEADTMFDKGFGPDI 309
G Q +L ++V TPGR+ H+ + +KYLVLDEAD + ++ F +
Sbjct: 126 GIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSL 185
Query: 310 RKFIG--PLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTA 367
+ + PL+ + T L +ATMT V+KL + + ++ + + T
Sbjct: 186 NQILEEIPLERK----------TFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTL 235
Query: 368 RHDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHG 427
+ + + ++ K L+ +L S + M+F T D +R + L + G
Sbjct: 236 KQQY-RFVAAKYKDCYLVYIL--SEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISG 292
Query: 428 EVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGR 486
++ +R+ L KFK+ +C LVCTD+A+RGLD+ VD V+ +D P NS DY+HR GR
Sbjct: 293 QMTQSKRLGALNKFKAG--ECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGR 350
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKIEEAIRK 517
TAR G G SLV + +L +IE+ I K
Sbjct: 351 TARAGRSGVGISLVNQYELEWYIQIEKLIGK 381
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 34/410 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F E+ +G+ + +++ PT +Q +P + G+ ++ + TGSGKT A+ P++
Sbjct: 148 FAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISG 207
Query: 199 LRRDEQLNGVLMKPK-----RPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGR 253
+ +D+ + +P+ P AV+L PTREL+ Q+ A+ S+ + + GG
Sbjct: 208 IMKDQHIE----RPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTP 263
Query: 254 IRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFI 313
+ Q L +D++V TPGR+ +E G + +++L LDEAD M D GF P IRK +
Sbjct: 264 VNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIV 323
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEE-----FQGIEHLRTSTLHKKISTAR 368
+ G+ QT+L +AT +Q+L + F + + +ST + R
Sbjct: 324 ---QQMDMPPPGVR-QTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSST---DLIVQR 376
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNR-----VMVFCNTLDSSRAVDHYLDENLISTV 423
+F+ S +K L+ +L GN+ +VF T + +++++L N
Sbjct: 377 VEFVHDS---DKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPAT 433
Query: 424 NYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLH 482
HG+ ++R L+ FK+ P LV TD+AARGLD+ V HVV FD P + DY+H
Sbjct: 434 TIHGDRSQQEREVALRSFKTGR--TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 491
Query: 483 RTGRTARMGAKGKVTSLVAKKDLNLAAKIEEAIRK--NESLEGITKESVR 530
R GRT R G G T+ + +A + E +++ E + +T+ + R
Sbjct: 492 RIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYASR 541
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 181/372 (48%), Gaps = 39/372 (10%)
Query: 152 VREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRR---DEQLNGV 208
V G P+ IQ P ++ + +V + TGSGKTL YL+P L+R D ++
Sbjct: 244 VYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG-- 301
Query: 209 LMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNHPIDMV 268
P +VL PTREL+ Q+ A ++ C + GG PQ + +D+V
Sbjct: 302 ------PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIV 355
Query: 269 VGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGF 328
V TPGR+ +E + + YLVLDEAD M D GF P IRK + + +
Sbjct: 356 VATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR-------- 407
Query: 329 QTVLVTATMTNAVQK-----LVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDA 383
QT++ TAT V+K LV+ I ++ +K I+ + ++L+
Sbjct: 408 QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPME-KHSRLEQ 466
Query: 384 LLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVN---YHGEVPAEQRVENLKK 440
+L+ EP G+++++FC+T R D L NL T HG+ +R + L +
Sbjct: 467 ILRSQEP----GSKIIIFCST---KRMCDQ-LARNLTRTFGAAAIHGDKSQAERDDVLNQ 518
Query: 441 FKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSL 499
F+S P LV TD+AARGLD+ D+ VV +DFP DY+HR GRT R GA G +
Sbjct: 519 FRSGR--TPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 576
Query: 500 VAKKDLNLAAKI 511
+D A+ +
Sbjct: 577 FGDQDAKHASDL 588
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 194/370 (52%), Gaps = 22/370 (5%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE L +G V ++++ G +VPT IQ +P +L G VV + TGSGKT A+L+P+++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
L++ GV RA++L PTR+L+EQ + K + R +++ GG + Q
Sbjct: 90 LKQHVPQGGV-------RALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQF 142
Query: 259 DSLNHPIDMVVGTPGRILQHIEE-GNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLK 317
+ L D+++ TPGR++ + E +M ++Y+V DEAD++F GF + + + L
Sbjct: 143 EELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLS 202
Query: 318 HRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGS 377
QT+L +AT+ +A+ + + + +R +K + F+ +
Sbjct: 203 ENR--------QTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVR-P 253
Query: 378 ENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-ENLISTVNYHGEVPAEQRVE 436
E K ALL ++ ++ + ++F +T V+ EN+ +V Y G++ + R
Sbjct: 254 EEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCY-GDMDQDARKI 312
Query: 437 NLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKGK 495
++ +F++ L+ TD+AARG+D+ +D+V+ +DFP ++HR GR AR G G
Sbjct: 313 HVSRFRA--RKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGC 370
Query: 496 VTSLVAKKDL 505
S V +D+
Sbjct: 371 AYSFVTPEDM 380
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 222/437 (50%), Gaps = 30/437 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ L + ++ +++EMG + T+IQ + +LEGK V+ + TGSGKTLA+L+P V+L
Sbjct: 91 FDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVEL 150
Query: 199 LRRDEQLNGVLMKPKRPRAV-VLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQ 257
L ++ P+ V V+CPTREL+ Q VA+ + H +MV GG R +
Sbjct: 151 LFKER------FSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSE 204
Query: 258 EDSLNHPIDMVVGTPGRILQHIEEGN-MVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL 316
+ ++V+ TPGR+L H++ +Y +K LV+DEAD + ++ F D+ K + L
Sbjct: 205 AQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKIL 264
Query: 317 -KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKIST-ARHDFIKL 374
K R QT L +AT T+ V+ L H+ +K++ +
Sbjct: 265 PKTR---------QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCV 315
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQR 434
S+ +L L+ L+ +L K ++MVF +T S + + + + + HG + +R
Sbjct: 316 VPSKQRLILLISFLKKNLNK--KIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRR 373
Query: 435 VENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTAR-MGA 492
+ F + L+CTD+AARGLD+ VD ++ +D P +Y+HR GRTAR GA
Sbjct: 374 TKTFFDFMKAKKGI--LLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGA 431
Query: 493 KGKVTSLVAKKDLNLAAKIEEAIRKNESLEGITKESVRKDITRTQITELRGKNKNLVRVS 552
KGK ++ ++L ++ A + LE K R ++ + + K+ NL +++
Sbjct: 432 KGKALLVLIPEELQFIRYLKAAKVPVKELEFNEK---RLSNVQSALEKCVAKDYNLNKLA 488
Query: 553 KVKDKSGGHASSGNSRA 569
KD + S+ NS +
Sbjct: 489 --KDAYRAYLSAYNSHS 503
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 196/384 (51%), Gaps = 29/384 (7%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE L + D S++EMG T+IQ +P ++ G+ V+ + TGSGKTLA+L+P V+L
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVEL 215
Query: 199 LRRDEQLNGVLMKPKRPRAV-VLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQ 257
L R V P+ V V+CPTREL+ Q + VAK + + V GG + + +
Sbjct: 216 LYR------VKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTE 269
Query: 258 EDSLNHPIDMVVGTPGRILQHIEEGN-MVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL 316
+ L ++++V TPGR+L H+E N ++ ++K+LV+DEAD + ++ F D++K + L
Sbjct: 270 AEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLL 329
Query: 317 -KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKIST-ARHDFIKL 374
K R QT L +AT + V+ L ++ K+++ +
Sbjct: 330 PKTR---------QTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCV 380
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQR 434
S +L LL L+ K ++MVF +T S++ + G + +R
Sbjct: 381 VPSAMRLLFLLTFLKRFQGK-KKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKR 439
Query: 435 VENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTAR-MGA 492
+F + L+CT++AARGLD VD +V +D P N DY+HR GRTAR GA
Sbjct: 440 TPTFLQFI--KAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGA 497
Query: 493 KGKVTSLVAKKDLNL-----AAKI 511
KGK ++ ++L AAKI
Sbjct: 498 KGKALLVLTPQELKFIQYLKAAKI 521
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 191/369 (51%), Gaps = 23/369 (6%)
Query: 157 IEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLP-LVQLLRRDEQLNGVLMKPKRP 215
E P+ IQ P +L+G+ ++ + TGSGKTLA+ +P ++ +L++++++ G K P
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGG-SKKVNP 192
Query: 216 RAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNHPIDMVVGTPGRI 275
+VL PTREL+ Q+ V + + V GG PQ ++ +D+V+GTPGR+
Sbjct: 193 TCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRL 252
Query: 276 LQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTA 335
IE + D+ ++VLDEAD M D GF +R + ++K Q V+ +A
Sbjct: 253 RDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILS----NTNKVR----QMVMFSA 304
Query: 336 TMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL------SGSENKLDALLQVLE 389
T V KL +EF ++ ++ A HD +++ + +L ALL+
Sbjct: 305 TWPLDVHKLA-QEFMDPNPIKVIIGSVDLA-ANHDVMQIIEVLDERARDQRLIALLEKYH 362
Query: 390 PSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCP 449
S + NRV+VF + ++ +L + V+ HG +R +L FK + CP
Sbjct: 363 KS--QKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGS--CP 418
Query: 450 TLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVAKKDLNLA 508
LV TD+AARGLD+ DV+ V+ + FP + DY+HR GRT R G KG + + LA
Sbjct: 419 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 478
Query: 509 AKIEEAIRK 517
++ +R+
Sbjct: 479 GELVNVLRE 487
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 28/380 (7%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE+ + E++ + E G E P+ IQ +P L G+ ++ + G+GKT A+ +P+++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ +D N V+ +AV++ PTREL+ Q +V K + H + + + +GG ++
Sbjct: 193 IDQD---NNVI------QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 243
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L P+ ++VGTPGRIL ++G V D LV+DEAD + + F P + I L
Sbjct: 244 MRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPE 303
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQG--IEHLRTSTLHKKISTARHDFIKLSG 376
Q ++ +AT V+ D + +L K I T + F++
Sbjct: 304 SR--------QILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGI-TQFYAFVEERQ 354
Query: 377 SENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVE 436
+ L+ L L+ N+ ++FCN+++ + + E S H ++ + R
Sbjct: 355 KIHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 409
Query: 437 NLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKGK 495
F+ N C LVCTDL RG+D+ V+ V+ FDFP+N+ YLHR GR+ R G G
Sbjct: 410 VFHDFR--NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 467
Query: 496 VTSLVAKKDLNLAAKIEEAI 515
+L+ +D +IE+ +
Sbjct: 468 AVNLITYEDRFNLYRIEQEL 487
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 28/380 (7%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE+ + E++ + E G E P+ IQ +P L G+ ++ + G+GKT A+ +P+++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ +D N V+ +AV++ PTREL+ Q +V K + H + + + +GG ++
Sbjct: 193 IDQD---NNVI------QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 243
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L P+ ++VGTPGRIL ++G V D LV+DEAD + + F P + I L
Sbjct: 244 MRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPE 303
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQG--IEHLRTSTLHKKISTARHDFIKLSG 376
Q ++ +AT V+ D + +L K I T + F++
Sbjct: 304 SR--------QILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGI-TQFYAFVEERQ 354
Query: 377 SENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVE 436
+ L+ L L+ N+ ++FCN+++ + + E S H ++ + R
Sbjct: 355 KIHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 409
Query: 437 NLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKGK 495
F+ N C LVCTDL RG+D+ V+ V+ FDFP+N+ YLHR GR+ R G G
Sbjct: 410 VFHDFR--NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 467
Query: 496 VTSLVAKKDLNLAAKIEEAI 515
+L+ +D +IE+ +
Sbjct: 468 AVNLITYEDRFNLYRIEQEL 487
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 192/392 (48%), Gaps = 35/392 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+++ V+ +++E GI PT IQ G+P +L G+ ++ + TGSGKTL ++LP++ +
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMI 207
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSI------SHHARFRCTMVSGGG 252
++E + + + P +++CP+REL+ Q + V + + + R + GG
Sbjct: 208 ALQEEMMMPI-AAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGI 266
Query: 253 RIRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKF 312
+R Q + + + +VV TPGR+ + + M +YL LDEAD + D GF DIR+
Sbjct: 267 DMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREV 326
Query: 313 IGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLH-KKISTARHDF 371
K + QT+L +ATM +Q ++ T++ + A D
Sbjct: 327 FDHFKSQR--------QTLLFSATMPTKIQIFARSAL-----VKPVTVNVGRAGAANLDV 373
Query: 372 IK---LSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGE 428
I+ E K+ LL+ L+ + V++FC + YL + V HG
Sbjct: 374 IQEVEYVKQEAKIVYLLECLQKT---SPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGG 430
Query: 429 VPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRT 487
E R + FK+ +D LV TD+A++GLD D+ HV+ +D P +Y+HR GRT
Sbjct: 431 KDQEDREYAISSFKAGKKD--VLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRT 488
Query: 488 ARMGAKGKVTSLVAKKD-----LNLAAKIEEA 514
R G G T+ + K L+L ++EA
Sbjct: 489 GRCGKTGIATTFINKNQSETTLLDLKHLLQEA 520
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 185/375 (49%), Gaps = 26/375 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F EL + ++ + +G + PT IQ +P L G+ + + TGSGKT A+ LP ++
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228
Query: 199 LRRDEQLNGVLMKPKR---PRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
L L +PKR R ++L PTREL+ Q+ + ++++ +C ++ GG +R
Sbjct: 229 L---------LFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVR 279
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMV-YGDIKYLVLDEADTMFDKGFGPDIRKFIG 314
QE L D+VV TPGR++ H+ V D+ L+LDEAD + GF +I + +
Sbjct: 280 EQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVR 339
Query: 315 PLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
R QT+L +ATMT V++LV L ++ + +++
Sbjct: 340 LCPKRR--------QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRI 391
Query: 375 SGS-ENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQ 433
+ E +A+L L K ++V++F T ++ + + HG + Q
Sbjct: 392 RRTREANQEAVLLSLCTRTFK-SKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQ 450
Query: 434 RVENLKKFKSDNEDCPTLVCTDLAARGLD-LDVDHVVMFDFPRNSIDYLHRTGRTARMGA 492
R+++L+ F+ D L+ TD+AARGLD + V V+ + PR Y+HR GRTAR G
Sbjct: 451 RLDSLELFRKQEVDF--LIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGR 508
Query: 493 KGKVTSLVAKKDLNL 507
+G + V D +L
Sbjct: 509 EGYAVTFVTDSDRSL 523
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 189/400 (47%), Gaps = 32/400 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
+EE + E++ +V G + P+ IQ +P L+ + V+ + TGSGKT A++LP++
Sbjct: 315 WEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAY 374
Query: 199 LRR------DEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGG 252
+ R + + G P AVV+ PTREL++Q+ +H+ FR T + GG
Sbjct: 375 ISRLPPMSEENETEG-------PYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQ 427
Query: 253 RIRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKF 312
I Q + ++V+ TPGR++ +E V Y+VLDEAD M D GF P +
Sbjct: 428 SIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGV 487
Query: 313 IGPLKHRSSK---------SEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKK 363
+ + + K + + T + +ATM V++L + + + T K
Sbjct: 488 LDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKT 547
Query: 364 ISTARHDFIKLSGSEN--KLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLIS 421
I + SE +L LL L A +VF NT + ++ LD+
Sbjct: 548 TDLISQHVIMMKESEKFFRLQKLLDELGEKTA-----IVFVNTKKNCDSIAKNLDKAGYR 602
Query: 422 TVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDY 480
HG EQR +L+ F++ + LV TD+ RG+D+ DV HV+ +D P++ Y
Sbjct: 603 VTTLHGGKSQEQREISLEGFRAKRYNV--LVATDVVGRGIDIPDVAHVINYDMPKHIEMY 660
Query: 481 LHRTGRTARMGAKGKVTSLVAKKDLNLAAKIEEAIRKNES 520
HR GRT R G G TS + D + +++ + ++ S
Sbjct: 661 THRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNS 700
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 190/398 (47%), Gaps = 47/398 (11%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ++ ++ +++ GI PT IQ G+P VL G+ ++ + TGSGKTL ++LP++ +
Sbjct: 99 FMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMI-I 157
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSI------SHHARFRCTMVSGGG 252
L E++ + + P A+V+CP+REL++Q + V + + R R + GG
Sbjct: 158 LALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
Query: 253 RIRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKF 312
+R Q D + + +VV TPGR+ + + M + L LDEAD + D GF DIR
Sbjct: 218 DMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHV 277
Query: 313 IGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKIST------ 366
K + QT+L +ATM +Q TS L K ++
Sbjct: 278 FDHFKSQR--------QTLLFSATMPAKIQIFA-----------TSALVKPVTVNVGRAG 318
Query: 367 -ARHDFIK---LSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLIST 422
A D I+ E K+ LL+ L+ + V++FC + YL +
Sbjct: 319 AANLDVIQEVEYVKQEAKIVYLLECLQKTTPP---VLIFCENKADVDDIHEYLLLKGVEA 375
Query: 423 VNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYL 481
V HG E R + FK+ +D LV TD+A++GLD D+ HV+ +D P +Y+
Sbjct: 376 VAIHGGKDQEDRDYAISLFKAGKKD--VLVATDVASKGLDFPDIQHVINYDMPGEIENYV 433
Query: 482 HRTGRTARMGAKGKVTSLVAKKD-----LNLAAKIEEA 514
HR GRT R G G T+ + K L+L ++EA
Sbjct: 434 HRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEA 471
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 183/374 (48%), Gaps = 38/374 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE+ + +++ + E G E P+ IQ +P L G ++ + G+GKT A+ +P+
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPV--- 182
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
L + + N V+ +A++L PTREL+ Q +V K +S + + + +GG +R
Sbjct: 183 LEKIDPNNNVI------QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDI 236
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L+ P+ ++VGTPGRIL ++G V D LV+DEAD + F P + + I L
Sbjct: 237 MRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ 296
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLR---TSTLHKKIS----TARHDF 371
Q ++ +AT V+ D HLR L +++ T + F
Sbjct: 297 NR--------QFLMFSATFPVTVKAFKD------RHLRKPYVINLMDQLTLMGVTQYYAF 342
Query: 372 IKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPA 431
++ + L+ L L+ N+ ++FCN+++ + + E S H ++
Sbjct: 343 VEERQKVHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQ 397
Query: 432 EQRVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARM 490
+ R +F+ N C LVCTDL RG+D+ V+ V+ FDFPR S YLHR GR+ R
Sbjct: 398 DHRNRVFHEFR--NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRF 455
Query: 491 GAKGKVTSLVAKKD 504
G G +LV +D
Sbjct: 456 GHLGLAVNLVTYED 469
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 183/374 (48%), Gaps = 38/374 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE+ + +++ + E G E P+ IQ +P L G ++ + G+GKT A+ +P+
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPV--- 182
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
L + + N V+ +A++L PTREL+ Q +V K +S + + + +GG +R
Sbjct: 183 LEKIDPNNNVI------QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDI 236
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L+ P+ ++VGTPGRIL ++G V D LV+DEAD + F P + + I L
Sbjct: 237 MRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ 296
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLR---TSTLHKKIS----TARHDF 371
Q ++ +AT V+ D HLR L +++ T + F
Sbjct: 297 NR--------QFLMFSATFPVTVKAFKD------RHLRKPYVINLMDQLTLMGVTQYYAF 342
Query: 372 IKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPA 431
++ + L+ L L+ N+ ++FCN+++ + + E S H ++
Sbjct: 343 VEERQKVHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQ 397
Query: 432 EQRVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARM 490
+ R +F+ N C LVCTDL RG+D+ V+ V+ FDFPR S YLHR GR+ R
Sbjct: 398 DHRNRVFHEFR--NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRF 455
Query: 491 GAKGKVTSLVAKKD 504
G G +LV +D
Sbjct: 456 GHLGLAVNLVTYED 469
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 211/419 (50%), Gaps = 46/419 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQ- 197
FEELG+ D ++ S+ G VPT++Q VPA+++G V+ S+TGSGKTLAYLLP++
Sbjct: 112 FEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSE 171
Query: 198 ---LLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSI--SHHARFRCTMVSGGG 252
L + + K +A+++ P+REL Q+ R + + H R +V G
Sbjct: 172 IGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGAN 231
Query: 253 RIRPQEDSL--NHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIR 310
R+R QE++L N P +VVGTPGRI + + G + ++LVLDE D + F DI
Sbjct: 232 RMR-QEEALKKNKPA-IVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIH 289
Query: 311 KFIGPLKHRSSK------SEGLGFQTVLVTATMTNAV---QKLVDEEFQGIEHLRTSTLH 361
+ + + RS E QT+LV+AT+ +V K E ++ + + L
Sbjct: 290 RILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLD 349
Query: 362 KKISTARHDFIKLSGSE--NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-EN 418
+A + + SE ++ +Q L P+L + + +D+ R H LD ++
Sbjct: 350 TVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQS 409
Query: 419 LISTVNY---------------------HGEVPAEQRVENLKKFKSDNEDCPTLVCTDLA 457
+I+ +N+ HG++ R LKKFK N + LV +L+
Sbjct: 410 VIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFK--NGEIKVLVTNELS 467
Query: 458 ARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVAKKDLNLAAKIEEAI 515
ARGLD+ + D VV + P +++ Y HR GRT R+G KG V ++ + + + K+E+ +
Sbjct: 468 ARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQL 526
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 178/370 (48%), Gaps = 30/370 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FE+ + +++ + E G E P+ IQ +P L G ++ + G+GKT A+ +P
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPT--- 212
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
L + + N V+ +AV+L PTREL+ Q +V K +S + + + +GG +R
Sbjct: 213 LEKIDPENNVI------QAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDI 266
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L P+ ++VGTPGRIL ++G V D LV+DEAD + F P I + I L
Sbjct: 267 MRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPE 326
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQG---IEHLRTSTLHKKISTARHDFIKLS 375
Q ++ +AT V+ D + I + TL T + F++
Sbjct: 327 SR--------QILMFSATFPVTVKSFKDRYLKKPYIINLMDQLTLMG--VTQYYAFVEER 376
Query: 376 GSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRV 435
+ L+ L L+ N+ ++FCN+++ + + E S H ++ + R
Sbjct: 377 QKVHCLNTLFSKLQ-----INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRN 431
Query: 436 ENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKG 494
F+ N C LVCTDL RG+D+ V+ V+ FDFPR S YLHR GR+ R G G
Sbjct: 432 RVFHDFR--NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLG 489
Query: 495 KVTSLVAKKD 504
+LV +D
Sbjct: 490 LAVNLVTYED 499
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 191/388 (49%), Gaps = 36/388 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F +L I D+ +++ T++Q +P L G+ ++ + TGSGKTLA+++P+++
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 199 LRRDEQL--NGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRP 256
L R+ +GV +++ PTREL+ Q F V + +F ++ GG
Sbjct: 133 LHRERWSPEDGV-------GCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVD 185
Query: 257 QEDSLNHPIDMVVGTPGRILQHIEEG-NMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
E H ++++V PGR+LQH++E N ++ L+LDEAD + D F + I
Sbjct: 186 VEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQ 245
Query: 316 L-KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTAR----HD 370
L KHR QT+L +AT T V+ L + E++ ++H + TA
Sbjct: 246 LPKHR---------QTLLFSATQTKKVKDLARLSLRDPEYI---SVHAEAVTATPTSLMQ 293
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENL--ISTVNYHGE 428
+ + E KLD L ++ L +R++VF +T + V ++ I + HG+
Sbjct: 294 TVMIVPVEKKLDMLWSFIKTHL--NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGK 351
Query: 429 VPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDLD--VDHVVMFDFPRNSIDYLHRTGR 486
+ E+R+ +F E L CTD+ ARGLD D VD VV D P + Y+HR GR
Sbjct: 352 MSQEKRMGVYSQF---IERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGR 408
Query: 487 TARMGAKGKVTSLVAKKDLNLAAKIEEA 514
TAR +GK + + + K++EA
Sbjct: 409 TARFYTQGKSLLFLTPSEEKMIEKLQEA 436
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 185/383 (48%), Gaps = 36/383 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F ++GI ++V+ V E G E P+ IQ V +L+G+ V+ + +G+GKT L + Q+
Sbjct: 37 FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQV 96
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
V + +A++L PTREL+ Q + ++I HA + GG +
Sbjct: 97 ---------VDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDI 147
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L H + +V GTPGR+ I+ ++ IK L+LDE+D M +GF D+ +++ P
Sbjct: 148 RKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPP 207
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLS 375
Q LV+AT+ + + ++ + + + + F+ +
Sbjct: 208 -----------DLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVE 256
Query: 376 GSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENL----ISTVNYHGEVPA 431
E K D L + + + ++FCNT R VD YL E + + + HG++P
Sbjct: 257 KEEWKFDTLCDLYDTLTI--TQAVIFCNT---KRKVD-YLSEKMRSHNFTVSSMHGDMPQ 310
Query: 432 EQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARM 490
++R + +F+S D L+ TD+ ARG+D+ V V+ +D P N Y+HR GR+ R
Sbjct: 311 KERDAIMNEFRSG--DSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRF 368
Query: 491 GAKGKVTSLVAKKDLNLAAKIEE 513
G KG + V D+ + IE+
Sbjct: 369 GRKGVAINFVKSDDIKILRDIEQ 391
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 195/388 (50%), Gaps = 26/388 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
+ + G+ +++ +++++ E P IQ +P ++ G+ + + TGSGKTL ++LP+++
Sbjct: 193 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 252
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
++ + P +V+ PTREL +Q+ + S RC V GG + Q
Sbjct: 253 IKDQPPVEA----GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQI 308
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIK---YLVLDEADTMFDKGFGPDIRKFIGP 315
L ++VV TPGR++ + + +++ +LV+DEAD MFD GF P I + I
Sbjct: 309 SELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQN 368
Query: 316 LKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRT---STLHKKISTARHDFI 372
++ QTVL +AT V+ L + ++ S ++K I+ +
Sbjct: 369 IRPER--------QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQ----LV 416
Query: 373 KLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAE 432
++ ++ LL++L KG +++VF + + A+ + ++ ++ HG
Sbjct: 417 EVRPESDRFLRLLELLGEWSEKG-KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQT 475
Query: 433 QRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMG 491
R + FK+D C L+ T +AARGLD+ +++ VV FD P + DY+HR GRT R G
Sbjct: 476 DRESTISDFKNDV--CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAG 533
Query: 492 AKGKVTSLVAKKDLNLAAKIEEAIRKNE 519
KG + +++ D A + +A+ +E
Sbjct: 534 RKGCAVTFISEDDAKYAPDLVKALELSE 561
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 197/391 (50%), Gaps = 32/391 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
+ + G+ +++ +++++ E P IQ +P ++ G+ + + TGSGKTL ++LP+++
Sbjct: 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590
Query: 199 LRRD---EQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
++ E +G P +V+ PTREL +Q+ + S RC V GG +
Sbjct: 591 IKDQPPVEAGDG-------PIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVA 643
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIK---YLVLDEADTMFDKGFGPDIRKF 312
Q L ++VV TPGR++ + + +++ +LV+DEAD MFD GF P I +
Sbjct: 644 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 703
Query: 313 IGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRT---STLHKKISTARH 369
I ++ QTVL +AT V+ L + ++ S ++K I+
Sbjct: 704 IQNIRPER--------QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQ--- 752
Query: 370 DFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEV 429
+++ ++ LL++L KG +++VF + + A+ + ++ ++ HG
Sbjct: 753 -LVEVRPESDRFLRLLELLGEWSEKG-KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGK 810
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
R + FK+D C L+ T +AARGLD+ +++ VV FD P + DY+HR GRT
Sbjct: 811 DQTDRESTISDFKNDV--CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTG 868
Query: 489 RMGAKGKVTSLVAKKDLNLAAKIEEAIRKNE 519
R G KG + +++ D A + +A+ +E
Sbjct: 869 RAGRKGCAVTFISEDDAKYAPDLVKALELSE 899
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 196/377 (51%), Gaps = 24/377 (6%)
Query: 141 ELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLR 200
ELGI E++ ++ GIE IQ + +EG+ ++ + TG+GKTLA+ +P++ +
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 201 RDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDS 260
+ +G + + P +VL PTREL+ QV + + + C + GG I Q
Sbjct: 168 KYNAKHG---RGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQ 222
Query: 261 LNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRS 320
L++ +D+ VGTPGR++ ++ G + +++++VLDEAD M GF D+ + L +
Sbjct: 223 LDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKR 282
Query: 321 SKSEGLGFQTVLVTATMTNAVQKLVDEEFQG---IEHLRTSTLHKKISTARHDFIKLSGS 377
Q+++ +ATM + ++ L + ++ + S +K++ + ++ S
Sbjct: 283 --------QSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDS--DQKLADGITTYSIIADS 332
Query: 378 ENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVEN 437
+ +++ L AKG + +VF T + + + L + HG++ QR
Sbjct: 333 YGRA-SIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEA-LHGDISQSQRERT 390
Query: 438 LKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKV 496
L F+ + + LV TD+AARGLD+ +VD ++ ++ P N+ ++HRTGRT R G KG
Sbjct: 391 LAGFRDGHFNI--LVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSA 448
Query: 497 TSLVAKKDLNLAAKIEE 513
L+ +D + A KI E
Sbjct: 449 I-LIYSQDQSRAVKIIE 464
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 177/336 (52%), Gaps = 20/336 (5%)
Query: 163 IQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVLMKPKR-PRAVVLC 221
++ + VPA L+G+ ++ + TG+GKTLA+ +P+++ L + + R P+ +VL
Sbjct: 36 VRAVLVPA-LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLA 94
Query: 222 PTRELSEQVFRVAKSISHHARFRCTM-VSGGGRIRPQEDSLNHPIDMVVGTPGRILQHIE 280
PTREL++QV K I A + T+ V GG Q+ +L +D+VVGTPGRI+ IE
Sbjct: 95 PTRELAKQV---EKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 151
Query: 281 EGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTATMTNA 340
++ G+++YLVLDEAD M GF + + L + Q++L +ATM
Sbjct: 152 GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR--------QSMLFSATMPTW 203
Query: 341 VQKLVDEEFQGIEHLR-TSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKGNRVM 399
V+KL + ++ +K++ + + S +K +L L AKG + +
Sbjct: 204 VKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSK-RTILSDLITVYAKGGKTI 262
Query: 400 VFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAAR 459
VF T + V L N I+T HG++ QR L F+ LV TD+A+R
Sbjct: 263 VFTQTKRDADEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGK--FTVLVATDVASR 319
Query: 460 GLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKG 494
GLD+ +VD V+ ++ P + ++HR+GRT R G +G
Sbjct: 320 GLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 355
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 189/377 (50%), Gaps = 24/377 (6%)
Query: 141 ELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLR 200
+LGI E++ +++ GIE IQ + +EG+ ++ + TG+GKTLA+ +P++ +
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 201 RDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDS 260
+ +G + K P+ +VL PTREL+ QV + + + C + GG I Q
Sbjct: 180 KFNAKHG---RGKNPQCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRE 234
Query: 261 LNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRS 320
LN+ ID+ VGTPGRI+ ++ G + +++++VLDEAD M GF D+ + L +
Sbjct: 235 LNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKR 294
Query: 321 SKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENK 380
Q+++ +ATM + ++ L + + + T L D I +
Sbjct: 295 --------QSMMFSATMPSWIRSLTKKY---LNNPLTIDLVGDSDQKLADGITMYSIAAD 343
Query: 381 LDALLQVLEPSL---AKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVEN 437
++ P + KG + +VF T + + L ++ HG++ QR
Sbjct: 344 SYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEA-LHGDISQAQRERT 402
Query: 438 LKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKV 496
L F+ N LV TD+AARGLD+ +VD V+ ++ P N+ ++HRTGRT R G KG
Sbjct: 403 LAGFRDGN--FSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSA 460
Query: 497 TSLVAKKDLNLAAKIEE 513
L+ +D A K+ E
Sbjct: 461 I-LIHGQDQTRAVKMIE 476
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 175/365 (47%), Gaps = 51/365 (13%)
Query: 156 GIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVLMKPKR- 214
GIE IQ VL+G +V + TG GKTLA++LP+++ L +NG K KR
Sbjct: 115 GIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESL-----VNGP-AKSKRK 168
Query: 215 ------PRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNHPIDMV 268
P +VL PTREL++QV + + GG QE L +D+V
Sbjct: 169 MGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIV 228
Query: 269 VGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGF 328
VGTPGRI HIE N+ + +++ VLDEAD M GF D+ +G ++ +
Sbjct: 229 VGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTK------V 282
Query: 329 QTVLVTATMTNAVQKLVDEEF---QGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALL 385
QT+L +AT+ + V+ + + Q L + K ++ RH I + ++ + L+
Sbjct: 283 QTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRH--IAIPCNKAAMARLI 340
Query: 386 QVLEPSLAKGNRVMVFCNT----------LDSSRAVDHYLDENLISTVNYHGEVPAEQRV 435
+ + G + ++F T LD SRA+ HGE+P QR
Sbjct: 341 PDIISCYSSGGQTIIFAETKVQVSELSGLLDGSRAL--------------HGEIPQSQRE 386
Query: 436 ENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKG 494
L F+ N TLV T++AARGLD+ DV ++ + PR Y+HR+GRT R G G
Sbjct: 387 VTLAGFR--NGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTG 444
Query: 495 KVTSL 499
+L
Sbjct: 445 VAVTL 449
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 21/349 (6%)
Query: 151 SVREMGIEVPTEIQ-CIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVL 209
S+ + GI IQ + VPA L+G+ ++ + TG+GKTLA+ +P+++ L +
Sbjct: 116 SLEKRGITHLFPIQRAVLVPA-LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAF 174
Query: 210 MKPKR-PRAVVLCPTRELSEQVFRVAKSISHHARFRCTM-VSGGGRIRPQEDSLNHPIDM 267
+ R P+ +VL PTREL++QV K I A + T+ V GG Q+ +L +D+
Sbjct: 175 RRSGRLPKFLVLAPTRELAKQV---EKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDV 231
Query: 268 VVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLG 327
VVGTPGRI+ IE ++ G+++YLVLDEAD M GF + + L +
Sbjct: 232 VVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR------- 284
Query: 328 FQTVLVTATMTNAVQKLVDEEFQGIEHLR-TSTLHKKISTARHDFIKLSGSENKLDALLQ 386
Q++L +ATM V+KL + ++ +K++ + + S +K +L
Sbjct: 285 -QSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSK-RTILS 342
Query: 387 VLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNE 446
L AKG + +VF T + V L N I+T HG++ QR L F+
Sbjct: 343 DLITVYAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGK- 400
Query: 447 DCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKG 494
LV TD+A+RGLD+ +VD V+ ++ P + ++HR+GRT R G +G
Sbjct: 401 -FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 448
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 21/349 (6%)
Query: 151 SVREMGIEVPTEIQ-CIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVL 209
S+ + GI IQ + VPA L+G+ ++ + TG+GKTLA+ +P+++ L +
Sbjct: 116 SLEKRGITHLFPIQRAVLVPA-LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAF 174
Query: 210 MKPKR-PRAVVLCPTRELSEQVFRVAKSISHHARFRCTM-VSGGGRIRPQEDSLNHPIDM 267
+ R P+ +VL PTREL++QV K I A + T+ V GG Q+ +L +D+
Sbjct: 175 RRSGRLPKFLVLAPTRELAKQV---EKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDV 231
Query: 268 VVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLG 327
VVGTPGRI+ IE ++ G+++YLVLDEAD M GF + + L +
Sbjct: 232 VVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR------- 284
Query: 328 FQTVLVTATMTNAVQKLVDEEFQGIEHLR-TSTLHKKISTARHDFIKLSGSENKLDALLQ 386
Q++L +ATM V+KL + ++ +K++ + + S +K +L
Sbjct: 285 -QSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSK-RTILS 342
Query: 387 VLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNE 446
L AKG + +VF T + V L N I+T HG++ QR L F+
Sbjct: 343 DLITVYAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGK- 400
Query: 447 DCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKG 494
LV TD+A+RGLD+ +VD V+ ++ P + ++HR+GRT R G +G
Sbjct: 401 -FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG 448
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 208/431 (48%), Gaps = 49/431 (11%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F++ + + ++++ G E T +Q +P +L+GK V+ + TG+GKT+A+LLP ++
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 199 L------RRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGG 251
+ RD + +++ +V+CPTREL+ Q A + + +H +V GG
Sbjct: 444 VIKSPPASRDSRQPPIIV-------LVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGG 496
Query: 252 GRIRPQEDSLN-HPIDMVVGTPGRILQHIEE----GNMVYGDIKYLVLDEADTMFDKGFG 306
++ ++ + +P ++V TPGR+ HIE + G +K LVLDEAD + D GF
Sbjct: 497 TKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMG-VKVLVLDEADHLLDMGFR 555
Query: 307 PDIRKFIGPL-KHRSSKSEGLGFQTVLVTATMTNAVQKLV------DEEFQGIEHLRTST 359
DI + I + K R QT L +AT+ V+++ D EF +
Sbjct: 556 RDIERIIAAVPKQR---------QTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGE 606
Query: 360 LHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKGN---RVMVFCNTLDSSRAVDHYLD 416
H+K++ + + S ++ +LL VL N +V++FC T +R V L
Sbjct: 607 THQKVTQ-----MYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLS 661
Query: 417 ENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPR 475
+ ++ H P R +F+ LV +D++ARG+D DV VV P
Sbjct: 662 QLSLNVREIHSRKPQSYRTRVSDEFRKSK--AIILVTSDVSARGVDYPDVSLVVQMGLPS 719
Query: 476 NSIDYLHRTGRTARMGAKGKVTSLVAKKDLNLAAKIEEAIRKNESLEGITKESVRKDITR 535
+ Y+HR GRT R G +G+ L+A + + +++ L I E+V++ +
Sbjct: 720 DREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKR--VQ 777
Query: 536 TQITELRGKNK 546
++++ KNK
Sbjct: 778 KGLSQVEMKNK 788
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 198/402 (49%), Gaps = 39/402 (9%)
Query: 149 MGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGV 208
+ ++++ G E T +Q +P +L+GK V+ + TG+GKT+A+LLP ++++ + +
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSP- 390
Query: 209 LMKPKRP--RAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGGGRIRPQEDSLN-HP 264
KRP A+V+CPTREL+ Q A + + +H +V GG R+ ++ + +P
Sbjct: 391 --DNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNP 448
Query: 265 IDMVVGTPGRILQHIEE----GNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL-KHR 319
++V TPGR+ HIE + G +K LVLDEAD + D GF DI + I + K R
Sbjct: 449 CQILVATPGRLKDHIENTPGFATRLKG-VKVLVLDEADHLLDMGFRKDIERIISAVPKER 507
Query: 320 SSKSEGLGFQTVLVTATMTNAVQKLV------DEEFQGIEHLRTSTLHKKISTARHDFIK 373
QT L +AT+ V+++ D EF H T H+++ +
Sbjct: 508 ---------QTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQ-----MH 553
Query: 374 LSGSENKLDALLQVLEPSLAKGN---RVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVP 430
+ S ++ +LL L GN +V+VFC T ++ V L E ++ H P
Sbjct: 554 MIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKP 613
Query: 431 AEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTAR 489
R +F+ LV +D++ARG+D DV V+ P++ Y+HR GRT R
Sbjct: 614 QSYRTRVSNEFRKSK--GLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGR 671
Query: 490 MGAKGKVTSLVAKKDLNLAAKIEEAIRKNESLEGITKESVRK 531
G +G+ L+A + + +++ L I E+V+K
Sbjct: 672 KGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKK 713
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 206/436 (47%), Gaps = 97/436 (22%)
Query: 139 FEELGIGDEVMGSVRE-MGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQ 197
F LG+ ++ ++E MG E PT +Q +P +L G+ V++ + TG+GKT+AYL PL+
Sbjct: 31 FSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIH 90
Query: 198 LLRRDEQLNGVLMKPKRPR-----AVVLCPTRELSEQVFRVAKSISHHARFRCTM---VS 249
L G PK R A+V+ PTREL QV+ + + H RF + V
Sbjct: 91 ------HLQG--HSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLH--RFHWIVPGYVM 140
Query: 250 GGGRIRPQEDSLNHPIDMVVGTPGRILQHIEE-GNMVYGDIKYLVLDEADTMFDKGFGPD 308
GG + ++ L I +++ TPGR+L H++ + V+ ++++++ DEAD++ + G+G +
Sbjct: 141 GGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKE 200
Query: 309 IRKFIGPLKHRSSKS--------EGLGFQTVLVTATMTNAVQKLV-----DEEFQGI--- 352
I + I L ++ +G+ Q +L++AT+ + V L D G+
Sbjct: 201 IEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNT 260
Query: 353 ---EHLRTSTLHKKISTARHDFIKLSGSEN-----------------------KLDALLQ 386
++L + S A I ++ S N +L ALL
Sbjct: 261 KLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLS 320
Query: 387 VLEPSLAK--GNRVMVFCNTLDSSRAVD-HYLDENLISTVNY------------------ 425
VL+ + +V+VF +T D AVD HY +L+S +
Sbjct: 321 VLKNLFEREASQKVVVFFSTRD---AVDFHY---SLLSEFQWPPNSETEEEGTKELFLKC 374
Query: 426 -----HGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSID 479
HG + E R FK++ + L+ TD+AARGLD V ++ +D P + +
Sbjct: 375 KTFRLHGSMEQEDRRSAFGTFKTEKQ--AVLLSTDVAARGLDFPKVRCIIQYDCPGEATE 432
Query: 480 YLHRTGRTARMGAKGK 495
Y+HR GRTAR+G KG+
Sbjct: 433 YVHRVGRTARIGEKGE 448
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 187/391 (47%), Gaps = 61/391 (15%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
+ + G+ +++ +++++ E P IQ +P ++ G+ + + TGSGKTL ++LP+++
Sbjct: 398 WHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 457
Query: 199 LRRD---EQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIR 255
++ E +G P +V+ PTREL +Q++ + S C V GG +
Sbjct: 458 IKDQPPVEAGDG-------PIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVA 510
Query: 256 PQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIK---YLVLDEADTMFDKGFGPDIRKF 312
Q L ++VV TPGR++ + + +++ YLV+DEAD MFD GF P I +
Sbjct: 511 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRI 570
Query: 313 IGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRT---STLHKKISTARH 369
+ ++ QTVL +AT V+ L + ++ S ++K I+
Sbjct: 571 VQNIRPDR--------QTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQ--- 619
Query: 370 DFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEV 429
+++ + LL++L KG +V+VF + + S
Sbjct: 620 -LVEIRPESERFSRLLELLGEWYEKG-KVLVFVRSQEKS--------------------- 656
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
+ FKSD C L+ T +AARGLD+ +++ VV FD P + DY+HR GRT
Sbjct: 657 --------ISDFKSDV--CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTG 706
Query: 489 RMGAKGKVTSLVAKKDLNLAAKIEEAIRKNE 519
R G KG + +++ D A + +A+ +E
Sbjct: 707 RAGRKGCAVTFISEDDAKYAPDLVKALELSE 737
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 15/323 (4%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F++ D ++ ++ ++G PT IQ G P L+G+ ++ + TGSGKTLAYLLP +
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ +L + P ++L PTREL+ Q+ ++ + R T + GG PQ
Sbjct: 227 VSAQPRLG----QDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQI 282
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L +++V+ TPGR++ +E + + YLVLDEAD M D GF P IRK + ++
Sbjct: 283 RDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP 342
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
QT+L +AT V+ L + + + K + + + I++ +
Sbjct: 343 DR--------QTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTP 394
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENL 438
K + LL +L+ L G+++++F T V L + + HG+ +R L
Sbjct: 395 EKYNRLLTLLK-QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVL 453
Query: 439 KKFKSDNEDCPTLVCTDLAARGL 461
+FKS P + TD+AARGL
Sbjct: 454 AEFKSGR--SPIMTATDVAARGL 474
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 198/381 (51%), Gaps = 30/381 (7%)
Query: 139 FEELG--IGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLV 196
F EL + ++++ ++ G EV T +Q +P + K VV+ + TGSGKTLA+LLP +
Sbjct: 16 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 75
Query: 197 QLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGGGRIR 255
+++RR N KP + V++ PTRELS Q+ +VA+ +S ++ GG +
Sbjct: 76 EIIRRS---NSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVE 132
Query: 256 PQEDSLNHP-IDMVVGTPGRILQHIEEGNMV-YGDIKYLVLDEADTMFDKGFGPDIRKFI 313
++L ++++GTPGR+ ++ + + +++ L+LDEAD + D GF + I
Sbjct: 133 ADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYII 192
Query: 314 GPL-KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQ-GIEHLRTSTLHKKISTARH-D 370
L K R +T L +AT T AV L + +E + + K S+ + +
Sbjct: 193 SRLPKQR---------RTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCE 243
Query: 371 FIKLSGSENKLDALLQVLEPSLAKGNRVMVF---CNTLDSSRAVDHYLDE-NLISTVNYH 426
++K ++ K L+ +L + K +++VF C +D V + IS + H
Sbjct: 244 YLKCE-ADQKSSQLVHLLIEN--KNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTH 300
Query: 427 GEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTG 485
G++ + R L F + L+CTD+AARGLD+ +D+VV +D P++ ++HR G
Sbjct: 301 GKMDQKGRDTALASFTEASSG--VLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVG 358
Query: 486 RTARMGAKGKVTSLVAKKDLN 506
RTARM +G+ + K+ +
Sbjct: 359 RTARMERQGRAIVFLMPKETD 379
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 180/380 (47%), Gaps = 32/380 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+++G+ D+V+ V + G + P+EIQ + +L+G+ V+ + +G+GKT + + Q+
Sbjct: 24 FDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQI 83
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ + ++ + +VL P+REL+ Q + ++I H + GG I
Sbjct: 84 VN---------ISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDI 134
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L + V GTPGR+ I+ G++ +K LVLDE+D M KG I L H
Sbjct: 135 KKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPH 194
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
Q L++AT+ + ++ ++ + + + ++ + E
Sbjct: 195 --------DIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEE 246
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNY-----HGEVPAEQ 433
K D L + N+ ++FCNT + VD +L E + S+ N+ HG+ ++
Sbjct: 247 WKFDTLCDLY--GRLTINQAIIFCNT---RQKVD-WLTEKMRSS-NFIVSSMHGDKRQKE 299
Query: 434 RVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGA 492
R + + +F+S L+ +D+ ARG+D+ V HV+ +D P N Y+HR GR R G
Sbjct: 300 RDDIMNQFRSFKS--RVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGR 357
Query: 493 KGKVTSLVAKKDLNLAAKIE 512
+G + V D+ IE
Sbjct: 358 EGVAINFVKSSDMKDLKDIE 377
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 202/454 (44%), Gaps = 45/454 (9%)
Query: 100 RSRHLKDSAKTPEAKNPPXXXXXXXXXXXXXXXXXXXXXFEELGIGDEVMGSVREMGIEV 159
R R K P K P F++ + + + + G +
Sbjct: 43 RGREGKSDVDEPLIKKPASTTPLVTQIAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKT 102
Query: 160 PTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLL------RRDEQLNGVLMKPK 213
T +Q +P +L+GK ++ + TG+GKT+A+LLP ++ + RD + +++
Sbjct: 103 MTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIV--- 159
Query: 214 RPRAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGGGRIRPQEDSLNH-PIDMVVGT 271
+V+CPTREL+ Q A + +H +V GG ++ ++ L P ++V T
Sbjct: 160 ----LVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVAT 215
Query: 272 PGRILQHIEE----GNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL-KHRSSKSEGL 326
PGR+ HI+ + G +K LVLDEAD + D GF +I + I + K R
Sbjct: 216 PGRLKDHIDNTSGFATRLMG-VKVLVLDEADHLLDMGFRREIERIIAAVPKQR------- 267
Query: 327 GFQTVLVTATMTNAVQKLV------DEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENK 380
QT L +AT+++ V+++ D EF H+K+S ++ +
Sbjct: 268 --QTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVS----QMYMIASLDRH 321
Query: 381 LDALLQVLEPSLAK--GNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENL 438
L +L+ + G +V++FC T +R V L + ++ H P R
Sbjct: 322 FSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVS 381
Query: 439 KKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVT 497
+F+ LV +D++ARG+D DV VV P + Y+HR GRT R G +G+
Sbjct: 382 DEFRKSKSII--LVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGV 439
Query: 498 SLVAKKDLNLAAKIEEAIRKNESLEGITKESVRK 531
L+A + + +++ SL I E+V+K
Sbjct: 440 LLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKK 473
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 180/387 (46%), Gaps = 25/387 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F G+ +++ ++ G + PT IQ +PA L GKS++ + TGSGKT ++L+P++
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ + + P A+VL PTREL QV AK + F+ +V GG + Q
Sbjct: 172 CTTYHSEHPSDQR-RNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
+ +++++GTPGR++ + + + +I VLDE D M +GF + + L
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQ 290
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
Q +L +AT++ V+K+ + I + +K I + +
Sbjct: 291 P---------QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQ 341
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTV------NYHGEVPAE 432
K L +L +V+ SSR V L N I+ V + HGE P +
Sbjct: 342 KK-QKLFDILRSQNHFKPPAVVYV----SSR-VGADLLANAITVVTGVKALSIHGEKPMK 395
Query: 433 QRVENLKKFKSDNEDCPTLVCTDLAARGLD-LDVDHVVMFDFPRNSIDYLHRTGRTARMG 491
+R + + F + P LV T + RG+D L V V++FD P +Y+H GR +RMG
Sbjct: 396 ERRDVMGSFLGG--EVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMG 453
Query: 492 AKGKVTSLVAKKDLNLAAKIEEAIRKN 518
KG V + D NL + A++ +
Sbjct: 454 EKGTAIVFVNEDDRNLFPDLVAALKSS 480
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 180/387 (46%), Gaps = 25/387 (6%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F G+ +++ ++ G + PT IQ +PA L GKS++ + TGSGKT ++L+P++
Sbjct: 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR 171
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
+ + + P A+VL PTREL QV AK + F+ +V GG + Q
Sbjct: 172 CTTYHSEHPSDQR-RNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
+ +++++GTPGR++ + + + +I VLDE D M +GF + + L
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQ 290
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
Q +L +AT++ V+K+ + I + +K I + +
Sbjct: 291 P---------QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQ 341
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTV------NYHGEVPAE 432
K L +L +V+ SSR V L N I+ V + HGE P +
Sbjct: 342 KK-QKLFDILRSQNHFKPPAVVYV----SSR-VGADLLANAITVVTGVKALSIHGEKPMK 395
Query: 433 QRVENLKKFKSDNEDCPTLVCTDLAARGLD-LDVDHVVMFDFPRNSIDYLHRTGRTARMG 491
+R + + F + P LV T + RG+D L V V++FD P +Y+H GR +RMG
Sbjct: 396 ERRDVMGSFLGG--EVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMG 453
Query: 492 AKGKVTSLVAKKDLNLAAKIEEAIRKN 518
KG V + D NL + A++ +
Sbjct: 454 EKGTAIVFVNEDDRNLFPDLVAALKSS 480
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 185/376 (49%), Gaps = 40/376 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ +G+ + ++ + G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 99
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 100 -----QLDFSLIQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L + +VVGTPGR+ ++ ++ +IK VLDEAD M +GF DI + + P
Sbjct: 152 RILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 211
Query: 316 LKHRSSKSEGLGFQTVLVT-ATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
S + + + +T M+ V+ LV + +E + + ++ +
Sbjct: 212 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGI------------KQFYVNV 259
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-----ENLISTVNYHGEV 429
E KL+ L + E +LA V +F NT R VD D ++ +S HG++
Sbjct: 260 EKEEWKLETLCDLYE-TLAITQSV-IFVNT---RRKVDWLTDKMRSRDHTVSAT--HGDM 312
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR GR+
Sbjct: 313 DQNTRDIIMREFRSGSS--RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 489 RMGAKGKVTSLVAKKD 504
R G KG + V + D
Sbjct: 371 RFGRKGVAINFVTRDD 386
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 57/388 (14%)
Query: 147 EVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLN 206
+++ ++ + E T +Q +P + K V + + TGSGKTLA+++PLV++LRR
Sbjct: 26 DIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFP 85
Query: 207 GVLMKPKRPRAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGGGRIRPQEDSLNHP- 264
KP + V++ PTRELS Q++ VA+ +S A ++ GG ++ +
Sbjct: 86 P---KPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEG 142
Query: 265 IDMVVGTPGRILQHIEEGNMV-YGDIKYLVLDEADTMFDKGFGPDIRKFIGPL-KHRSSK 322
++++GTPGR+ +E ++ + +++ L+LDEAD + + GF + I L K R
Sbjct: 143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQR--- 199
Query: 323 SEGLGFQTVLVTATMTNAVQKLV-----------------DEEFQGIEHLRT-STLHKKI 364
+T L +AT T V++L E Q + + +T S LH +
Sbjct: 200 ------RTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEY 253
Query: 365 STARHDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHY---LDE---- 417
D S +D L++ +++VF T S VD++ L +
Sbjct: 254 MECEAD----KKSSQLVDLLIK------NSDKKLIVFFMTCAS---VDYWGLVLSKIPAL 300
Query: 418 NLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRN 476
IS + HG++ R + L F + L+CTD+AARGLD+ +D+VV +D P++
Sbjct: 301 KSISLIPIHGDMKQNARDKALASFTKASSGA--LLCTDVAARGLDIPGIDYVVQYDPPQD 358
Query: 477 SIDYLHRTGRTARMGAKGKVTSLVAKKD 504
+ HR GRTAR+G +G+ + K+
Sbjct: 359 PNMFNHRAGRTARLGRQGRAIVFLLPKE 386
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 189/385 (49%), Gaps = 40/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ +G+ + ++ + G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 99
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 100 -----QLDFSLIQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L + +VVGTPGR+ ++ ++ +IK VLDEAD M +GF DI + + P
Sbjct: 152 RILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 211
Query: 316 LKHRSSKSEGLGFQTVLVT-ATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
S + + + +T M+ V+ LV + +E ++ ++ +
Sbjct: 212 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF------------YVNV 259
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-----ENLISTVNYHGEV 429
E KL+ L + E +LA V +F NT R VD D ++ +S HG++
Sbjct: 260 EKEEWKLETLCDLYE-TLAITQSV-IFVNT---RRKVDWLTDKMRSRDHTVSAT--HGDM 312
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR GR+
Sbjct: 313 DQNTRDIIMREFRSGS--SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 489 RMGAKGKVTSLVAKKDLNLAAKIEE 513
R G KG + V + D + I++
Sbjct: 371 RFGRKGVAINFVTRDDERMLFDIQK 395
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 187/390 (47%), Gaps = 50/390 (12%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ +G+ + ++ + G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 31 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 89
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 90 -----QLDFSLIQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 141
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L + +VVGTPGR+ ++ ++ +IK VLDEAD M +GF DI + + P
Sbjct: 142 RILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 201
Query: 316 LKHRSSKSEGLGFQTVLVT-ATMTNAVQKLVDEE---FQGIEHLRTSTLHKKISTARHDF 371
S + + + +T M+ V+ LV + +GI+ +
Sbjct: 202 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF---------------Y 246
Query: 372 IKLSGSENKLDALLQVLEPSLAKGNRVMVFCNT-------LDSSRAVDHYLDENLISTVN 424
+ + E KL+ L + E +LA V +F NT D R+ DH +
Sbjct: 247 VNVEKEEWKLETLCDLYE-TLAITQSV-IFVNTRRKVDWLTDKMRSRDHTVSAT------ 298
Query: 425 YHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHR 483
HG++ R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR
Sbjct: 299 -HGDMDQNTRDIIMREFRSGSS--RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR 355
Query: 484 TGRTARMGAKGKVTSLVAKKDLNLAAKIEE 513
GR+ R G KG + V + D + I++
Sbjct: 356 IGRSGRFGRKGVAINFVTRDDERMLFDIQK 385
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 180/376 (47%), Gaps = 41/376 (10%)
Query: 168 VPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL------LRRDEQLNGVLMKPKRPRAVVLC 221
+P LE + V+ S TGSGKT A++LP++ +R + Q G P A+V+
Sbjct: 233 IPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEG-------PYALVMV 285
Query: 222 PTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNHPIDMVVGTPGRILQHIEE 281
PTREL+ Q+ S + F+ ++G I Q L+ ++V+ TPGR+L +E
Sbjct: 286 PTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLER 345
Query: 282 GNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL---------KHRSSKSEGLGFQTVL 332
+V YLVLDEAD M D F P + + + + + + + + T +
Sbjct: 346 RYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYM 405
Query: 333 VTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSL 392
+ATM +V++L + + + K I+ + ++ +K L ++++ L
Sbjct: 406 FSATMLLSVERLARKFLRNPVVVTIGETTKFITQQ----VIMTKESDKFSRLKKLID-DL 460
Query: 393 AKGNRVMVFCNTLDSSRAVDHYLDENL-----ISTVNYHGEVPAEQRVENLKKFKSDNED 447
+VF NT + VD Y+ +NL H EQR +L++FK +
Sbjct: 461 GDDKTAIVFVNTRNK---VD-YIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFN 516
Query: 448 CPTLVCTDLAARGLD-LDVDHVVMFDFPRNSID-YLHRTGRTARMGAKGKVTSLVAKKDL 505
LV TD+ RGLD LD+ V+ +D P N++D Y HR GRT R G G T+ + +D
Sbjct: 517 --VLVTTDVLGRGLDILDLAQVINYDMP-NTMDLYTHRIGRTGRAGKTGVATTFLTLEDK 573
Query: 506 NLAAKIEEAIRKNESL 521
++ +++ + + SL
Sbjct: 574 DVFYGLKQKLNECNSL 589
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 184/373 (49%), Gaps = 37/373 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F + + E++ ++ + G E P+E+Q +P + G V+ + +G GKT ++L +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVF-RVAKSISHHARFRCTMVSGGGRIRPQ 257
+ P + A+VLC TREL+ Q+ + ++ + ++ GG I+
Sbjct: 108 IEP---------SPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIH 158
Query: 258 EDSL-NHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL 316
+D L N +VVGTPGR+L E ++ ++++ +LDE D M + D+R+ + +
Sbjct: 159 KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEI 215
Query: 317 KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTS-----TLHKKISTARHDF 371
+ + Q ++ +AT++ ++ + + Q + TLH + +
Sbjct: 216 FKMTPHDK----QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV----QHY 267
Query: 372 IKLSGSEN--KLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEV 429
IKLS E KL+ LL L+ N+V++F ++ + ++ L E ++ H +
Sbjct: 268 IKLSEMEKNRKLNDLLDALD-----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTA 488
E+R+ K FK ++ LV TDL RG+D++ V+ V+ +D P ++ YLHR GR
Sbjct: 323 SQEERLTRYKSFKEGHK--RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
Query: 489 RMGAKGKVTSLVA 501
R G KG + VA
Sbjct: 381 RFGTKGLAITFVA 393
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 184/373 (49%), Gaps = 37/373 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F + + E++ ++ + G E P+E+Q +P + G V+ + +G GKT ++L +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVF-RVAKSISHHARFRCTMVSGGGRIRPQ 257
+ P + A+VLC TREL+ Q+ + ++ + ++ GG I+
Sbjct: 108 IEP---------SPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIH 158
Query: 258 EDSL-NHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL 316
+D L N +VVGTPGR+L E ++ ++++ +LDE D M + D+R+ + +
Sbjct: 159 KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEI 215
Query: 317 KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTS-----TLHKKISTARHDF 371
+ + Q ++ +AT++ ++ + + Q + TLH + +
Sbjct: 216 FKMTPHDK----QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLV----QHY 267
Query: 372 IKLSGSEN--KLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEV 429
IKLS E KL+ LL L+ N+V++F ++ + ++ L E ++ H +
Sbjct: 268 IKLSEMEKNRKLNDLLDALD-----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTA 488
E+R+ K FK ++ LV TDL RG+D++ V+ V+ +D P ++ YLHR GR
Sbjct: 323 SQEERLTRYKSFKEGHK--RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAG 380
Query: 489 RMGAKGKVTSLVA 501
R G KG + VA
Sbjct: 381 RFGTKGLAITFVA 393
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 186/385 (48%), Gaps = 40/385 (10%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ +G+ + ++ + G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 99
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 100 -----QLDYALLQCQ---ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQ 151
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L + +VVGTPGR+ + ++ IK VLDEAD M +GF DI + + P
Sbjct: 152 RILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 211
Query: 316 LKHRSSKSEGLGFQTVLVT-ATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
S + + + +T M+ V+ LV + +E ++ ++ +
Sbjct: 212 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF------------YVNV 259
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-----ENLISTVNYHGEV 429
+ KL+ L + E +LA V +F NT R VD D ++ +S HG++
Sbjct: 260 EKEDWKLETLCDLYE-TLAITQSV-IFVNT---RRKVDWLTDKMRSRDHTVSAT--HGDM 312
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR GR+
Sbjct: 313 DQNTRDIIMREFRSGSS--RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 489 RMGAKGKVTSLVAKKDLNLAAKIEE 513
R G KG + V D + I++
Sbjct: 371 RFGRKGVAINFVTLDDQRMLFDIQK 395
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 32/380 (8%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ + + +++ + G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 43 FDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 101
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 102 -----QLDISLVQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQ 153
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKH 318
L + +VVGTPGR+ + ++ IK VLDEAD M +GF I L
Sbjct: 154 RVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPS 213
Query: 319 RSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSE 378
+ Q + +ATM ++ + + + + ++ + E
Sbjct: 214 K--------VQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEE 265
Query: 379 NKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-----ENLISTVNYHGEVPAEQ 433
KL+ L + E +LA V +F NT R VD D ++ +S HG++
Sbjct: 266 WKLETLCDLYE-TLAITQSV-IFVNT---RRKVDWLTDKMRSRDHTVSAT--HGDMDQNT 318
Query: 434 RVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGA 492
R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR GR+ R G
Sbjct: 319 RDIIMREFRSGSS--RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 376
Query: 493 KGKVTSLVAKKDLNLAAKIE 512
KG + + +D + A I+
Sbjct: 377 KGVAINFMTSEDERMMADIQ 396
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 179/373 (47%), Gaps = 28/373 (7%)
Query: 139 FEEL----GIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLP 194
F EL G ++ ++ E+G + PT IQ +P +L G+ + TGSGKT A++ P
Sbjct: 139 FAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICP 198
Query: 195 LVQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRI 254
++ L+R +G+ RAV+L P REL+ Q R K + + F +++ +
Sbjct: 199 MLIKLKR-PSTDGI-------RAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKP--L 248
Query: 255 RPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIG 314
D D+++ TP R+ + I+ + ++YLVLDE+D +F++ I +
Sbjct: 249 VKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVK 308
Query: 315 PLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
+ S L +AT+ ++V++L + + T + +
Sbjct: 309 ACSNPS-------IIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFA 361
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAV-DHYLDENLISTVNYHGEVPAEQ 433
E KL AL Q SL V++F + + ++ + D EN+ + V H ++P +
Sbjct: 362 GSEEGKLLALRQSFAESL--NPPVLIFVQSKERAKELYDELKCENIRAGV-IHSDLPPGE 418
Query: 434 RVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGA 492
R + +F++ + L+ TD+ ARG+D ++ V+ +DFP ++ Y+HR GR+ R G
Sbjct: 419 RENAVDQFRAGEK--WVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGR 476
Query: 493 KGKVTSLVAKKDL 505
G+ + ++D+
Sbjct: 477 SGEAITFYTEQDV 489
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 45/385 (11%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ +G+ + ++ G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 41 FDAMGLQENLL-----RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 94
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 95 -----QLDFSLIQCQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 146
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L + +VVGTPGR+ ++ ++ +IK VLDEAD M +GF DI + + P
Sbjct: 147 RILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 206
Query: 316 LKHRSSKSEGLGFQTVLVT-ATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
S + + + +T M+ V+ LV + +E ++ ++ +
Sbjct: 207 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF------------YVNV 254
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-----ENLISTVNYHGEV 429
E KL+ L + E +LA V +F NT R VD D ++ +S HG++
Sbjct: 255 EKEEWKLETLCDLYE-TLAITQSV-IFVNT---RRKVDWLTDKMRSRDHTVSAT--HGDM 307
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR GR+
Sbjct: 308 DQNTRDIIMREFRSGS--SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 365
Query: 489 RMGAKGKVTSLVAKKDLNLAAKIEE 513
R G KG + V + D + I++
Sbjct: 366 RFGRKGVAINFVTRDDERMLFDIQK 390
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 180/408 (44%), Gaps = 83/408 (20%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
FEELG+ ++ ++ + GIE PT IQ +P +LEGK VV + TGSGKTLAYLLPL+Q
Sbjct: 48 FEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQK 107
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
L + V K P A +L P+REL +QV+ S+ R + V + +
Sbjct: 108 LF---SADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASD 164
Query: 259 --DSLNHPIDMVVGTPGRILQHIEEGNM----VYGDIKYLVLDEADTMFDKGFGPDIRKF 312
++L +++V TP I + G + V + LVLDEAD + G+ ++R
Sbjct: 165 MRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSV 224
Query: 313 IGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKI-------- 364
+ R Q +L++AT ++ V+K L+ LH I
Sbjct: 225 TSIIPRRC--------QCLLMSATTSSDVEK-----------LKKLILHNPIVLTLTEDN 265
Query: 365 -------STARHDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDE 417
S + +I S + L L + + K ++++F NT+D + +L++
Sbjct: 266 DKEEAVPSNVQQFWISCSAQDKLLHILALLKLEVVQK--KILIFINTIDMGFRLKLFLEK 323
Query: 418 NLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTD---------------------- 455
I + +GE+P R+ L++F + D L+ TD
Sbjct: 324 FGIKSAILNGELPQNSRLHILEQFNAGLFD--YLIATDDNSQTKKQKEEAKGEANKENKK 381
Query: 456 --------LAA-----RGLDLDVDHVVM-FDFPRNSIDYLHRTGRTAR 489
L A RG+D H V+ FD P++ Y+HR GRT R
Sbjct: 382 NNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGR 429
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 177/382 (46%), Gaps = 38/382 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+E I + ++ GI T +Q + L+GK ++ + TG+GK++A+LLP ++
Sbjct: 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGGGRIRPQ 257
+ + + K ++LCPTREL+ Q+ K+ + +H + GG R R
Sbjct: 437 VLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLD 496
Query: 258 EDSL-NHPIDMVVGTPGRILQHIEEGNMVYG---DIKYLVLDEADTMFDKGFGPDIRKFI 313
+ L + P +++ TPGR+L HIE + + +K ++DEAD + D GF D+ K I
Sbjct: 497 QQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKII 556
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKIST------A 367
L + Q++L +AT+ V++ + L H I T
Sbjct: 557 DCLPRQR--------QSLLFSATIPKEVRR--------VSQLVLKRDHSYIDTIGLGCVE 600
Query: 368 RHDFIKLSGSENKLDALLQVLEPSLAKGN-------RVMVFCNTLDSSRAVDHYLDENLI 420
HD +K S ++ ++ P L K + +++VFC+T + + L E +
Sbjct: 601 THDKVKQSCIVAPHESHFHLV-PHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKL 659
Query: 421 STVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSID 479
+ H P R +FK N LV +D++ARG++ DV V+ P +
Sbjct: 660 NVREIHARKPQLHRTCVSDEFKESNR--LILVTSDVSARGMNYPDVTLVIQVGIPSDREQ 717
Query: 480 YLHRTGRTARMGAKGKVTSLVA 501
Y+HR GRT R G GK L+A
Sbjct: 718 YIHRLGRTGREGKGGKGLLLIA 739
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 167/366 (45%), Gaps = 39/366 (10%)
Query: 167 GVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLR-------RDEQLNGVLMKPKRPRAVV 219
+PA L GKS++ + TGSGKT ++L+P++ D++ N P A+V
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN--------PLAMV 54
Query: 220 LCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNHPIDMVVGTPGRILQHI 279
L PTREL QV AK + F+ +V GG + Q + +++++GTPGR++ +
Sbjct: 55 LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLL 114
Query: 280 EEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTATMTN 339
+ + +I VLDE D M +GF + + L Q +L +AT++
Sbjct: 115 SKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP---------QVLLFSATISR 165
Query: 340 AVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKGNRVM 399
V+K+ + I + +K I + + K L +L +
Sbjct: 166 EVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKK-QKLFDILRSQNHFKPPAV 224
Query: 400 VFCNTLDSSRAVDHYLDENLISTV------NYHGEVPAEQRVENLKKFKSDNEDCPTLVC 453
V+ SSR V L N I+ V + HGE P ++R + + F + P LV
Sbjct: 225 VYV----SSR-VGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGG--EVPVLVS 277
Query: 454 TDLAARGLD-LDVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVAKKDLNLAAKIE 512
T + RG+D L V V++FD P +Y+H GR +RMG KG V + D NL +
Sbjct: 278 TGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLV 337
Query: 513 EAIRKN 518
A++ +
Sbjct: 338 AALKSS 343
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 177/382 (46%), Gaps = 38/382 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+E I + ++ GI T +Q + L+GK ++ + TG+GK++A+LLP ++
Sbjct: 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKS-ISHHARFRCTMVSGGGRIRPQ 257
+ + + K A++LCPTREL+ Q+ K+ + H + GG R +
Sbjct: 390 VLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLD 449
Query: 258 EDSL-NHPIDMVVGTPGRILQHIEEGNMVYG---DIKYLVLDEADTMFDKGFGPDIRKFI 313
+ L + P +++ TPGR+L HIE + + +K ++DEAD + D GF D+ K I
Sbjct: 450 QQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKII 509
Query: 314 GPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKIST------A 367
L + Q++L +AT+ V++ + L H I T
Sbjct: 510 DCLPRQR--------QSLLFSATIPKEVRR--------VSQLVLKRDHSYIDTIGLGCVE 553
Query: 368 RHDFIKLSGSENKLDALLQVLEPSLAKGN-------RVMVFCNTLDSSRAVDHYLDENLI 420
HD ++ S ++ ++ P L K + +++VFC+T + + L E +
Sbjct: 554 THDKVRQSCIVAPHESHFHLV-PHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKL 612
Query: 421 STVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSID 479
+ H P R +FK N LV +D++ARG++ DV V+ P +
Sbjct: 613 NVREIHARKPQLHRTRVSDEFKESNR--LILVTSDVSARGMNYPDVTLVIQVGIPSDREQ 670
Query: 480 YLHRTGRTARMGAKGKVTSLVA 501
Y+HR GRT R G G+ L+A
Sbjct: 671 YIHRLGRTGREGKGGEGLLLIA 692
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 185/385 (48%), Gaps = 45/385 (11%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F+ +G+ + ++ G E P+ IQ G+ +G V+ + +G+GKT + ++Q
Sbjct: 41 FDAMGLQENLL-----RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ- 94
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQE 258
QL+ L++ + A+VL PTREL++Q+ +V +++ + + GG +R +
Sbjct: 95 -----QLDYALLQCQ---ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQ 146
Query: 259 DSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGP---DIRKFIGP 315
L + +VVGTPGR+ + ++ IK VLDEAD M +GF DI + + P
Sbjct: 147 RILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 206
Query: 316 LKHRSSKSEGLGFQTVLVT-ATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
S + + + +T M+ V+ LV + +E ++ ++ +
Sbjct: 207 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF------------YVNV 254
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLD-----ENLISTVNYHGEV 429
+ KL+ L + E +LA V +F NT R VD D ++ +S HG++
Sbjct: 255 EKEDWKLETLCDLYE-TLAITQSV-IFVNT---RRKVDWLTDKMRSRDHTVSAT--HGDM 307
Query: 430 PAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTA 488
R +++F+S + L+ TDL ARG+D+ V V+ FD P +YLHR GR+
Sbjct: 308 DQNTRDIIMREFRSGSS--RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 365
Query: 489 RMGAKGKVTSLVAKKDLNLAAKIEE 513
R G KG + V D + I++
Sbjct: 366 RFGRKGVAINFVTLDDQRMLFDIQK 390
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 180/400 (45%), Gaps = 41/400 (10%)
Query: 139 FEELGIGDEVM-GSVREMGIEVPTEIQCIGVPAVLE--GKSVVLGSHTGSGKTLAYLLPL 195
FE+L + E+M G EM E P++IQ I +P ++ K ++ +H GSGKT ++L +
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152
Query: 196 VQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTM-VSGGGRI 254
L R D L + P+A+ +CPTREL+ Q V + + + V R
Sbjct: 153 --LSRVDPTL-------REPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRG 203
Query: 255 RPQEDSLNHPID--MVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMF-DKGFGPDIRK 311
P + P+ +V+GTPG + + + + +K LV DEAD M GF D K
Sbjct: 204 APAA-TRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLK 262
Query: 312 FIGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDF 371
+ + + FQ +L +AT V+ V + L + + +
Sbjct: 263 IMKDIGRVNP-----NFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYK 317
Query: 372 IKLSGSENKLDALL-QVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVP 430
+ +NK++ + Q++E L + ++F T S++ V L E + HG +
Sbjct: 318 VVCPKEQNKIEVIKDQIME--LGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLT 375
Query: 431 AEQRVENLKKFKSDNEDCPT--LVCTDLAARGLDLD-VDHVVMFDFPRNSID-------Y 480
R + +K+FK +C T L+ TD+ ARG D V+ VV ++ P Y
Sbjct: 376 ESDRDKIVKEFK----ECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVY 431
Query: 481 LHRTGRTARMGAKGKVTSLVAKK--DLNLAAKIEEAIRKN 518
LHR GR R G KG V +L+ D + KIE+ N
Sbjct: 432 LHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEAN 471
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 186/415 (44%), Gaps = 71/415 (17%)
Query: 148 VMGSVREMGIEVPTEIQ--CIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQL 205
+M S+ + + PT+IQ C V A +GK V+ + TGSGKTLA+ LP++Q L + +
Sbjct: 201 LMKSIYRLDFKEPTKIQKACFNV-AAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREK 259
Query: 206 NGVLMKPK-----------RPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRI 254
G L K RA+++ PTREL+ QV ++ + + + + GG
Sbjct: 260 VGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFS 319
Query: 255 RPQEDSLNHPIDMVVGTPGRILQHIEEGN---MVYGDIKYLVLDEADTMFDKGFGPDIRK 311
QE L ++VV TPGR+ + + G + + + VLDEAD M ++G +++
Sbjct: 320 EKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQS 379
Query: 312 FIGPL---------KHRSSKSEGLGF-------QTVLVTATM------------------ 337
+ L K ++ KS QT + +AT+
Sbjct: 380 ILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSK 439
Query: 338 ------TNAVQKLVD-----EEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQ 386
N+++ L + + I+ TS L KI + FIK E DA L
Sbjct: 440 QSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEES---FIKCEEKEK--DAYLY 494
Query: 387 VLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNE 446
+ +G R +VFC ++ R + L + E+ R++++ +F++
Sbjct: 495 YILSVHGQG-RTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASEN 553
Query: 447 DCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLV 500
L+ TDL ARG+D+ +V ++ + P ++ Y+HR GRTAR A G +L+
Sbjct: 554 GI--LIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALI 606
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 187/412 (45%), Gaps = 74/412 (17%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F + + E++ ++ + G E P+E+Q +P + G V+ + +G GKT ++L +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVF-RVAKSISHHARFRCTMVSGGGRIRPQ 257
+ P + A+VLC TREL+ Q+ + ++ + ++ GG I+
Sbjct: 108 IEP---------SPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIH 158
Query: 258 EDSL-NHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPL 316
+D L N +VVGTPGR+L E ++ ++++ +LDE D M + D+R+ + +
Sbjct: 159 KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEI 215
Query: 317 KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRT----------------STL 360
+ + Q ++ +AT++ ++ + + Q + LRT +
Sbjct: 216 FKMTPHDK----QVMMFSATLSKEIRPVCKKFMQ--DGLRTLSGDSVALWWVGFGSGYCV 269
Query: 361 HKKISTAR----------------------------HDFIKLSGSEN--KLDALLQVLEP 390
+ AR +IKLS E KL+ LL L+
Sbjct: 270 FPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALD- 328
Query: 391 SLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPT 450
N+V++F ++ + ++ L E ++ H + E+R+ K FK ++
Sbjct: 329 ----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR--I 382
Query: 451 LVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVA 501
LV TDL RG+D++ V+ V+ +D P ++ YLHR GR R G KG + VA
Sbjct: 383 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVA 434
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 186/426 (43%), Gaps = 84/426 (19%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
F + + E++ ++ + G E P+E+Q +P + G V+ + +G GKT ++L +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 199 LRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVF-RVAKSISHHARFRCTMVSGGGRIRPQ 257
+ P + A+VLC TREL+ Q+ + ++ + ++ GG I+
Sbjct: 108 IEP---------SPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIH 158
Query: 258 EDSL-NHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFD-------------- 302
+D L N +VVGTPGR+L E ++ ++++ +LDE D M +
Sbjct: 159 KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKM 218
Query: 303 ----------------------KGFGPD--------IRKFIGPLKHRSSKSEGLGFQTVL 332
K F D +R F +++ + GF VL
Sbjct: 219 TPHDKQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGF-IVL 277
Query: 333 VTATMTNAVQKLVDEE--FQGIEHLRTS------------TLHKKISTARHDFIKLSGSE 378
V +M A+ + F+ R S TLH + +IKLS E
Sbjct: 278 VWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLV----QHYIKLSEME 333
Query: 379 N--KLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVE 436
KL+ LL L+ N+V++F ++ + ++ L E ++ H + E+R+
Sbjct: 334 KNRKLNDLLDALD-----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 388
Query: 437 NLKKFKSDNEDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKGK 495
K FK ++ LV TDL RG+D++ V+ V+ +D P ++ YLHR GR R G KG
Sbjct: 389 RYKSFKEGHK--RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 446
Query: 496 VTSLVA 501
+ VA
Sbjct: 447 AITFVA 452
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 165/335 (49%), Gaps = 37/335 (11%)
Query: 177 VVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVF-RVAK 235
V+ + +G GKT ++L +Q + P + A+VLC TREL+ Q+ +
Sbjct: 3 VICQAKSGMGKTAVFVLSTLQQIEP---------SPGQVSALVLCHTRELAYQICNEFVR 53
Query: 236 SISHHARFRCTMVSGGGRIRPQEDSL-NHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVL 294
++ + ++ GG I+ +D L N +VVGTPGR+L E ++ ++++ +L
Sbjct: 54 FSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFIL 113
Query: 295 DEADTMFDKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEH 354
DE D M + D+R+ + + + + Q ++ +AT++ ++ + + Q
Sbjct: 114 DECDKMLE---SLDMRRDVQEIFKMTPHDK----QVMMFSATLSKEIRPVCKKFMQDPME 166
Query: 355 LRTS-----TLHKKISTARHDFIKLSGSEN--KLDALLQVLEPSLAKGNRVMVFCNTLDS 407
+ TLH +H +IKLS E KL+ LL L+ N+V++F ++
Sbjct: 167 IYVDDEAKLTLH---GLVQH-YIKLSEMEKNRKLNDLLDALD-----FNQVVIFVKSVSR 217
Query: 408 SRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDLD-VD 466
+ ++ L E ++ H + E+R+ K FK ++ LV TDL RG+D++ V+
Sbjct: 218 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHK--RILVATDLVGRGIDIERVN 275
Query: 467 HVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVA 501
V+ +D P ++ YLHR GR R G KG + VA
Sbjct: 276 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVA 310
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 49/333 (14%)
Query: 139 FEELG--IGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLV 196
F EL + ++++ ++ G EV T +Q +P + K VV+ + TGSGKTLA+LLP +
Sbjct: 17 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 76
Query: 197 QLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRIRP 256
+++RR N KP + V++ PTRELS Q+ +VA+++ +C V
Sbjct: 77 EIIRRS---NSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFA-KCREVEADMNTLE 132
Query: 257 QEDSLNHPIDMVVGTPGRILQHIEEGNMV-YGDIKYLVLDEADTMFDKGFGPDIRKFIGP 315
+E + ++++GTPGR+ ++ + + +++ L+LDEAD + D GF + I
Sbjct: 133 EEGA-----NLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISR 187
Query: 316 L-KHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKL 374
L K R +T L +AT T AV L + R+ ++K
Sbjct: 188 LPKQR---------RTGLFSATQTQAVADLAK------------------AGLRNPYLKC 220
Query: 375 SGSENKLDALLQVLEPSLAKGNRVMVF---CNTLDSSRAVDHYLDE-NLISTVNYHGEVP 430
++ K L+ +L + K +++VF C +D V + IS HG++
Sbjct: 221 E-ADQKSSQLVHLLIEN--KNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMD 277
Query: 431 AEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL 463
+ R L F + L+CTD+AARGLD+
Sbjct: 278 QKGRDTALASFTEASSG--VLLCTDVAARGLDI 308
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 173/373 (46%), Gaps = 48/373 (12%)
Query: 144 IGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDE 203
+ + ++ + E+G PT+IQ +P + G+ +L + TGSGKTL YLL + L+
Sbjct: 83 VPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLI---- 138
Query: 204 QLNGVLMKPKRP--RAVVLCPTRELSEQVFRVAKSISHHARFR---CTMVS--GGGRIRP 256
P+R +AV++ PTREL QV +VA+ ++ + CT+++ GG +R
Sbjct: 139 -------NPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRR 191
Query: 257 QEDSLN-HPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMF--DKGFGPDIRKFI 313
+ L P ++V T + +E+ ++ LV+DE D +F K G +RK +
Sbjct: 192 HKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG-SVRKLL 250
Query: 314 GPLKHRSSKSEGLGFQTVLVTATM---TNAVQKLVDEEF--QGIEHLRTSTLHKKISTAR 368
+S S QTV +A++ + V + +++ + + H+ S +
Sbjct: 251 ------TSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLL 304
Query: 369 HDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRA--------VDHYLDENL- 419
H F+ + NK LL +LE + + V + S +A + +L +
Sbjct: 305 HRFV-MCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYK 363
Query: 420 --ISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRN 476
+ + G++ R +L + + LV TD+AARG+DL + H+ FD P+
Sbjct: 364 GSLEILLLEGDMNFNSRAASLTEIRQGGGF--LLVSTDIAARGIDLPETTHIFNFDLPQT 421
Query: 477 SIDYLHRTGRTAR 489
DYLHR GR R
Sbjct: 422 VTDYLHRAGRAGR 434
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 211/496 (42%), Gaps = 87/496 (17%)
Query: 147 EVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLN 206
E MG ++V + IG P E + + + S TGSGKTL+Y LP+VQLL
Sbjct: 47 ENMGISSLFPVQVAVWHETIG-PGGFE-RDICVNSPTGSGKTLSYALPIVQLLAS----- 99
Query: 207 GVLMKPKRP-RAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRI---------RP 256
+P R RA+V+ PTR+L+ QV V +I+ G I P
Sbjct: 100 ----RPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTP 155
Query: 257 QEDS------------LNHPIDMVVGTPGRILQHIEEGN-MVYGDIKYLVLDEADTMF-- 301
+ D+ L +D++V TPGR++ HI ++YLV+DE D +
Sbjct: 156 KLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLRE 215
Query: 302 ----------------DKGFGPDIRKFI----GPLKHRSSKSEGLGFQ--------TVLV 333
D P F+ G L+ +S GF+ +++
Sbjct: 216 AYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVL 275
Query: 334 TATMTNAVQKLVDEEFQGIEHLRTS----TLHKKISTARHDFIKLSGSEN-KLDALLQVL 388
+AT+T KL+ + + T L +K+ R I +G + L ALL+
Sbjct: 276 SATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLR--LICETGMKPVYLVALLKSW 333
Query: 389 EPSLAKGNRVMVFCNTLDSSR---AVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDN 445
E G + ++F ++++++R + ++ + I Y G + R + LK F+
Sbjct: 334 E-----GEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKG- 387
Query: 446 EDCPTLVCTDLAARGLDLD-VDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVAKKD 504
D LV +D RG+D+ V +V+ +D P + ++HR GRTAR G G+ +L++ +
Sbjct: 388 -DIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHE 446
Query: 505 LNLAAKIEEAIRKNES-LEGITKESVRKDITRTQITELRGKNKNLVRVSKVKDKSGGHAS 563
+ +K+ E + + + I S+ D R T K K LV K G A
Sbjct: 447 VRRFSKLLEKVGSDSCPIYPIPPTSL--DSIRATYTPALEKLKELVESE--APKKGRQAF 502
Query: 564 SGNSRAGMQSGKGSPP 579
NSR G K + P
Sbjct: 503 RHNSRTGNSQTKLNKP 518
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Query: 329 QTVLVTATMTNAVQK----LVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDAL 384
Q + + AT+ +K ++ FQ + + LH+ + +++++ ++++DAL
Sbjct: 354 QYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVT-VDSQVDAL 412
Query: 385 LQVLEPSLAKG-NRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKS 443
++ ++ + R MVF NT+++ AV L++ I YH ++R L F+
Sbjct: 413 IEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFR- 471
Query: 444 DNEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSLVAK 502
E VCTD AARG+D+ +V HV+ DF +++D+LHR GRTAR G G VTSL +
Sbjct: 472 --ETGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTE 529
Query: 503 KDLNLAAKIEEAIRKNESLE 522
+ +L I EA++ + +E
Sbjct: 530 ANRDLVEAIREAVKMGQPVE 549
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 139 FEELGIGDEVMGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQL 198
++ LG+ D V ++R+ G + P+ Q + +P++L GK V++ + TGSGKT YL P++
Sbjct: 82 WKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQ 141
Query: 199 LRRDEQLNGVLMKPKRPR-----AVVLCPTRELSEQVFRVAKSISH---HARFRCTMVSG 250
L + V + +RP +++LCP L EQV R+ + + R V G
Sbjct: 142 LTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCG 201
Query: 251 GGRIRPQEDSLNHPIDMVVGTPGRILQHIEEGN----MVYGDIKYLVLDEADTMFDKGFG 306
+ D L D++V TP +L +IE +KY+V DEAD + F
Sbjct: 202 S---QGWPDRLP---DIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQ 255
Query: 307 PDIRKFIGPLK 317
I + I L+
Sbjct: 256 NQIIRLINMLR 266
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 229 QVFRVAKSISHHARFR---CTMVS--GGGRIRPQEDSLN-HPIDMVVGTPGRILQHIEEG 282
QV +VA+ ++ + CT+++ GG +R + L P ++V T + +E+
Sbjct: 2 QVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKH 61
Query: 283 NMVYGDIKYLVLDEADTMF--DKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTATM--- 337
++ LV+DE D +F K G +RK + +S S QTV +A++
Sbjct: 62 IFRIDSVRVLVVDEVDFLFYSSKQVG-SVRKLL------TSFSSCDKRQTVFASASIPQH 114
Query: 338 TNAVQKLVDEEF--QGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKG 395
+ V + +++ + + H+ S + H F+ + NK LL +LE +
Sbjct: 115 KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFV-MCEKTNKHQVLLALLESDAPES 173
Query: 396 NRVMVFCNTLDSSRA--------VDHYLDENL---ISTVNYHGEVPAEQRVENLKKFKSD 444
+ V + S +A + +L + + + G++ R +L + +
Sbjct: 174 AIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQG 233
Query: 445 NEDCPTLVCTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTAR 489
LV TD+AARG+DL + H+ FD P+ DYLHR GR R
Sbjct: 234 GG--FLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 153/388 (39%), Gaps = 54/388 (13%)
Query: 139 FEELGIGDEV-MGSVREMGIEVPTEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQ 197
+EEL D++ ++ G +V +Q A +E K + TG GK+L Y LP
Sbjct: 185 YEELQALDDLEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATL 244
Query: 198 LLRRDEQLNGVLMKPKRPRAVVLCPTREL-SEQVFRVAKSISHHARF-RCTMVSGGGRIR 255
K +V+ P L +Q+ + A F S
Sbjct: 245 ---------------KAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAV 289
Query: 256 PQEDSLNHP-IDMVVGTPGRI---------LQHIEEGNMVYGDIKYLVLDEADTMFDKG- 304
QE ++P ++ TP +I L+ ++ ++ G V+DEA + G
Sbjct: 290 LQELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAG----FVVDEAHCVSQWGH 345
Query: 305 -FGPDIRKFIGPLKHRSSKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKK 363
F PD R+ +G LK F V V A A + + + + + R L
Sbjct: 346 DFRPDYRE-LGCLKQ--------NFPRVPVMALTATATESVCQDVLKSLRIPRAPVLKMS 396
Query: 364 ISTARHDFIKLSGSENKLDALLQVLEPSLAKGNRVMVFCNTLDSSRAVD--HYLDENL-I 420
+ + ++ L L ++L K +V+C L S VD +L+E +
Sbjct: 397 FDRINLKYEVIVKTKEPLKQLQELLRDRF-KDQSGIVYC--LSKSECVDVAKFLNEKCKV 453
Query: 421 STVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLA-ARGLD-LDVDHVVMFDFPRNSI 478
TV YH VPA+QRV+ +K+++ +VC +A G+D DV V+ +
Sbjct: 454 KTVYYHAGVPAKQRVDVQRKWQTGE---VRIVCATIAFGMGIDKADVRFVIHNTLSKAVE 510
Query: 479 DYLHRTGRTARMGAKGKVTSLVAKKDLN 506
Y +GR R G + + L KKD +
Sbjct: 511 SYYQESGRAGRDGLQAQCICLYQKKDFS 538
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 139/340 (40%), Gaps = 44/340 (12%)
Query: 164 QCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVLMKPKRPRAVVLCPT 223
Q + +L G S +L TG+GK+L Y +P + L G+ +V+ P
Sbjct: 274 QLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMIL-------PGI--------TLVVSPL 318
Query: 224 RELSEQVFRVAKSISHHARFRCTMVSGGGRIRPQEDSLNH----PIDMVVGTPGRILQHI 279
L + SI + ++S R ++L I ++ +P R+L ++
Sbjct: 319 VSLMIDQLKHLPSI-----IKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLL-NV 372
Query: 280 EEGNM--VYGDIKYLVLDEADTM--FDKGFGPDIRKFIGPLKHRSSKSEGLGFQTVLVTA 335
E +M + + +V+DEA + + F P + + K+E + T T
Sbjct: 373 EFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLFSELKAECILAMTATATT 432
Query: 336 TMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDF---IKLSGSENKLDALLQVLEPSL 392
AV +E T+ + K S R +F + LSG+ D L+ + P
Sbjct: 433 MTLQAV-------MSSLEIPSTNLIQK--SQLRDNFELSVSLSGANRMKDLLILMESPPY 483
Query: 393 AKGNRVMVFCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLV 452
+ ++V+C + + YL +N I+ YH +PA+ RV + F S+ +V
Sbjct: 484 KEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNK--IRVVV 541
Query: 453 CTDLAARGLDL-DVDHVVMFDFPRNSIDYLHRTGRTARMG 491
T GLD DV V+ F P + +Y+ GR R G
Sbjct: 542 ATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDG 581
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 339 NAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKGNRV 398
++++ ++D ++ L K S +R D ++LSGSE + L+ V
Sbjct: 579 SSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSE----------KIRLSSLTFV 628
Query: 399 MVF-CNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLA 457
+F CNT+ +S V+ ++ +++ + ++ +R LKKFK N D LV +L
Sbjct: 629 KMFPCNTITTSLNVNT-IEARGMNSAELNRDLRKLRRSSVLKKFK--NRDVRVLVTNELL 685
Query: 458 ARGL-DLDVDHVVMFDFPRNSIDYLHRTGRTARMGAKGKVTSL 499
GL D + D +V + P +++ Y HR GR R G K V ++
Sbjct: 686 TWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTV 728