Miyakogusa Predicted Gene
- Lj0g3v0109709.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0109709.1 Non Chatacterized Hit- tr|I1L457|I1L457_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,31.06,2e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; seg,NUL,CUFF.6309.1
(175 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-35
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 3e-32
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 133 7e-32
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 5e-31
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-30
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 127 5e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 6e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 5e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-28
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-27
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 7e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 8e-27
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 9e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 2e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 4e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 7e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-26
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-25
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 3e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 5e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 3e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 2e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 8e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 8e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 6e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 2e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 3e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 86 2e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 80 9e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-15
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 79 2e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 3e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 3e-15
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 7e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 7e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 76 1e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 9e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 5e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 8e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 68 4e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 4e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 8e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 3e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 3e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 3e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-10
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 61 4e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 7e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 1e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 59 1e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 59 1e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 58 4e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 6e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 3e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 5e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 5e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 8e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 53 9e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 53 1e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 53 1e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 51 4e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 51 4e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 9e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 2e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 47 4e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 6e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 47 7e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 8e-06
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 144 bits (364), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/162 (41%), Positives = 100/162 (61%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
KAD+ + F M+H P P + F + ++AK V++L +QME KGI N+ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+INCFC ++ AFS +G I+K GY PNTITF+TLI G+C G +S+A+ D M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + + +T L+NGLC +G+ A+ L+ ++ E QPNAV
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Score = 89.7 bits (221), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+H P + ++ K+NH + M KG PN+ T ILIN +C R
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ + + RG +T+T+ TLI+G C G+++ A +M+++ N VTY +
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 145 LINGLCKAGETKAALQLLRRIEE 167
L++GLC GE++ AL++ +IE+
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEK 501
Score = 87.0 bits (214), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 70/134 (52%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I+ L K +L +ME KGIT N++T ILI FC+ GR + +L +++KR
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+PN +TF+ LI G++ +A H +MI +G + +TY LI+G CK A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 160 QLLRRIEELAVQPN 173
Q++ + PN
Sbjct: 389 QMVDLMVSKGCDPN 402
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 76/160 (47%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN + F M I + ++G L R M + I PN+VT ++L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ F G++ A + ++ RG P+TIT+T+LI G C + KA D M++KG
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N T+ +LING CKA L+L R++ V + V
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F ++ K N + L R+M +G+ + VT LI FC LG++N A +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ R PN +T+ L+ G+C NGE KA+ + + + + Y ++I+G+C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 152 AGETKAALQLLRRIEELAVQP 172
A + A L + V+P
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKP 541
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ S K+ L ++M +GI P+ +T T LI+ FC ++ A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++ +G PN TF LI G C I + M +G + VTY LI G C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ A +L + + V PN V
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIV 474
Score = 73.2 bits (178), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M P + ++ L + L +M G PN VT ++N C G+
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
A +L + +R + + ++ +I G+C +G + A + ++M KG N +TY +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI G C AG +LLR + + + PN V
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P +G +L + K + L R+ME + I + V +I+I+ C G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ AF++ + +G N IT+ LI G C+ G DMI + N VT+ V
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ K G+ + A +L + + + P+ +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ PP I + +L L + + ++E + ++ I+I+ C+
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+++ A+ + ++ +G P T+ +I G+C G +S+A M G + T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 142 YGVLINGLCKAGETKAALQLLRRIEEL 168
Y +LI G+ +++L IEEL
Sbjct: 581 YNILIRAHLGDGDATKSVKL---IEEL 604
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 134 bits (337), Expect = 3e-32, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
KAD+ V F M+ P P + F + ++AK V++L +QME KGI ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNT----------------------------- 104
I+INCFC ++++AFS +G I+K GY P+T
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 105 ------ITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
IT TL+ G+C NG++S A+ D M+ GFQ N+VTYG ++N +CK+G+T A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 159 LQLLRRIEELAVQPNAV 175
++LLR++EE ++ +AV
Sbjct: 248 MELLRKMEERNIKLDAV 264
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 79/160 (49%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN + F M I + ++G L R M + I+PN+VT ++L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ F G++ A +L +++RG PNTIT+ +LI G C + +A+ D MI+KG
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +T+ +LING CKA L+L R + V N V
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 76/143 (53%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + ++ K+N I + M KG P+++T ILIN +C R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ + + RG NT+T+ TL++G C +G++ A +M+++ + + V+Y +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 145 LINGLCKAGETKAALQLLRRIEE 167
L++GLC GE + AL++ +IE+
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEK 501
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 73/151 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ S K+ L ++M +GI PN +T LI+ FC R
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A ++ ++ +G P+ +TF LI G C I + +M +G N VTY
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
L+ G C++G+ + A +L + + V+P+ V
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Score = 80.5 bits (197), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + V M+ P +G +L + K + L R+ME + I + V +
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+I+ C G ++ AF++ + +G+ + IT+ TLI G C+ G DMI +
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N VT+ VLI+ K G+ + A QLL+ + + + PN +
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I+ L K +L +ME KG +++T LI FC+ GR + +L +++KR
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
PN +TF+ LI G++ +A +M+ +G N +TY LI+G CK + A+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 160 QLL 162
Q++
Sbjct: 389 QMV 391
Score = 76.6 bits (187), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M P + ++ L + L +M G PN VT ++N C G+
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
A +L + +R + + ++ +I G+C +G + A + ++M KGF+ + +TY
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI G C AG +LLR + + + PN V
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F ++ K N + L R+M +G+ N VT L+ FC G++ A +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ R P+ +++ L+ G+C NGE+ KA+ + + + Y ++I+G+C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 152 AGETKAALQLL 162
A + A L
Sbjct: 521 ASKVDDAWDLF 531
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 133 bits (334), Expect = 7e-32, Method: Composition-based stats.
Identities = 62/160 (38%), Positives = 97/160 (60%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ ++ F M+ P P + F ++A+ V+ +Q+E GI N+ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+INCFC + FA+SVLG ++K GY P+T TF TLIKG+ G++S+A+ D M+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G Q + VTY ++NG+C++G+T AL LLR++EE V+ +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Score = 80.1 bits (196), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 76/144 (52%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F +L K+ L ++M +GI+PN++T L++ +C R++ A ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +++ P+ +TFT+LIKG C + M ++ +G N VTY +L+ G C+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+G+ K A +L + + V P+ +
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVM 439
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 76/146 (52%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M+ P I + ++ +N ++ M +P++VT T LI +C
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ R++ V NI KRG N +T++ L++G C +G+I A +M++ G + +T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 142 YGVLINGLCKAGETKAALQLLRRIEE 167
YG+L++GLC G+ + AL++ +++
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 76.3 bits (186), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L ++M G+ P+++T IL++ C G++ A + ++ K + +TT+I+GMC
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G++ A + + KG + N +TY V+I+GLCK G A LLR++EE PN
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 76.3 bits (186), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 61/118 (51%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R + +G+ N VT +IL+ FC G+I A + ++ G P+ +T+ L+ G+C N
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ KA+ +D+ V Y +I G+CK G+ + A L + V+PN +
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Score = 73.6 bits (179), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P T F ++ L + + L +M G P++VT ++N C G + A +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +R + T++T+I +C +G I A+ +M KG + + VTY L+ GLCK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG+ LL+ + + PN +
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVI 299
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M N + + I+ SL + ISL ++ME KGI ++VT L+ C G+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
N +L +++ R PN ITF L+ G++ +A + +MI +G N +TY
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
L++G C A +L + P+ V
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 71/160 (44%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D +S F M + + ++ L K L + M + I PN++T +L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
++ F G++ A + ++ RG PN IT+ TL+ G C +S+A + D M+
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ VT+ LI G C +++ R I + + NAV
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Score = 66.2 bits (160), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 72/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + I+ + + + L R+ME + + ++ T + +I+ C G I+ A S+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G + +T+ +L++G+C G+ + DM+++ N +T+ VL++ K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ + A +L + + + PN +
Sbjct: 311 EGKLQEANELYKEMITRGISPNII 334
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 67/153 (43%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ P + +G +L L + + ++ + +V T +I C
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G++ A+++ ++ +G PN +T+T +I G+C G +S+A M G N T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
Y LI + G+ A+ +L+ ++ +A
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 61/119 (51%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I ++ I+ + K +L + KG+ PN++T T++I+ C G ++ A +L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
+ + G PN T+ TLI+ +G+++ + ++M + GF + + ++I+ L A
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 130 bits (327), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/162 (38%), Positives = 92/162 (56%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ V F M P P + F + +A+ V+ L +QME KGI N+ T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+INC C +++ AFS +G I+K GY P+T+TF+TLI G+C G +S+A+ D M+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + +T L+NGLC G+ A+ L+ R+ E QPN V
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Score = 86.7 bits (213), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 69/120 (57%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L R M + ITP++V + LI+CF G++ A + +++RG P+T+T+T+LI G C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ KA H D M++KG N T+ +LING CKA L+L R++ V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + ++ K+N + M KG PN+ T ILIN +C
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ + + RG +T+T+ TLI+G C G++ A +M+++ + + V+Y +
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 145 LINGLCKAGETKAALQLLRRIEE 167
L++GLC GE + AL++ +IE+
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEK 485
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ K+ L ++M +GI+P+ VT T LI+ FC +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A +L ++ +G PN TF LI G C I + M +G + VTY
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI G C+ G+ + A +L + + V+P+ V
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I+ L K +L +ME KG +++ T LI FC+ GR + +L +++KR
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P+ + F+ LI G++ +A H +MI +G + VTY LI+G CK + A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 160 QLLRRIEELAVQPN 173
+L + PN
Sbjct: 373 HMLDLMVSKGCGPN 386
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F ++ K N + L R+M +G+ + VT LI FC LG++ A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ R P+ +++ L+ G+C NGE KA+ + + + + Y ++I+G+C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 152 AGETKAALQLLRRIEELAVQPN 173
A + A L + V+P+
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPD 526
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 75/162 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + V M+ P +G +L + K + L R+ME + I + V +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+I+ C G ++ AF++ + +G+ + I +TTLI+G C+ G DMI +
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ V + LI+ K G+ + A +L + + + + P+ V
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 68/151 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M P + ++ L + L +M G PN VT ++ C G+
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
A +L + +R + + ++ +I G+C +G + A + ++M KGF+ + + Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI G C AG +LLR + + + P+ V
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 65/153 (42%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ P I + +L L + + ++E + ++ I+I+ C+
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+++ A+ + ++ +G P+ T+ +I G+C G +S+A M G N T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
Y +LI G+ + +L+ I+ +A
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+++ F HM+ P P I F +L +++K VI L QM+ GI N+ T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL+NCFC +++ A S LG ++K G+ P+ +TF +L+ G C + A++ D M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ N V Y +I+GLCK+ + AL LL R+E+ + P+ V
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ P + + ++ K + L +M +G+ N VT T
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILI +C G++N A + ++ G HPN IT+ L+ G+C NG+I KA+ DM
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + VTY ++I G+CKAGE A + + + P+
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ + K+ +M + + P++VT ++LI C R++ A +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G ++ +G P+ +T++ LI G C + ++ M +M +G N VTY +LI G C+
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG+ A ++ RR+ V PN +
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNII 397
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ M P + ++ I+ L K + L +ME GI P++VT LI+ C
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
GR + A ++ + KR +P+ TF LI G +S+A F+++MI + + VT
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y +LI GLC A ++ + P+ V
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R+M F G+ PN++T +L++ C G+I A +L ++ K G + +T+ +I+GMC
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
GE++ A + + +G + TY ++ GL K G + A L R+++E + PN
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M+ + P I + ++ L + + M KG P++VT +ILIN +C
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
++ + + +RG NT+T+T LI+G C G+++ A M+ G N +T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y VL++GLC G+ + AL +L +++ + + V
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 21 SFL-HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
SFL M+ + P I FG +L + + + + + QM G PN+V +I+
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
C +++ A +L + K G P+ +T+ +LI G+C +G S A M + +
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
T+ LI+ K G A + + ++ P+ V
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 127 bits (318), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ V+ F M+ P P I F ++L ++AK N VISL QM+ GI N T +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEI------------- 120
ILINCFC ++ A +VLG ++K GY PN +T ++L+ G CH+ I
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 121 ----------------------SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
S+AM D M+AKG Q + VTYGV++NGLCK G+T A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 159 LQLLRRIEELAVQPNAV 175
LL ++E+ ++P +
Sbjct: 241 FNLLNKMEQGKLEPGVL 257
Score = 89.0 bits (219), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 73/131 (55%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ I+ L K H ++L ++ME KGI PN+VT + LI+C C+ GR + A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++++R +P+ TF+ LI G++ +A +D+M+ + + VTY LING C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 152 AGETKAALQLL 162
A Q+
Sbjct: 374 HDRLDEAKQMF 384
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ L +M + I P++VT + LIN FC R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + P+ +T+ TLIKG C + + M +M +G N VTY +
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI GL +AG+ A ++ + + V PN
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F ++ L N ++L +M KG P++VT +++N C G + AF++
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + P + + T+I G+C + A++ +M KG + N VTY LI+ LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G A +LL + E + P+
Sbjct: 304 YGRWSDASRLLSDMIERKINPD 325
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K + + R+M +G+ N VT
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILI G + A + ++ G PN +T+ TL+ G+C NG++ KAM + +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ TY ++I G+CKAG+ + L + V+P+ V
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I + ++ + + M K P++VT LI FC R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ V + +RG NT+T+ LI+G+ G+ A +M++ G N +TY
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQP 172
L++GLCK G+ + A+ + ++ ++P
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ L + C + ++M G+ PN++T L++ C G++ A V + +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P T+ +I+GMC G++ ++ KG + + V Y +I+G C+ G + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 160 QLLRRIEELAVQPNA 174
L + ++E PN+
Sbjct: 557 ALFKEMKEDGTLPNS 571
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 75/163 (46%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA ++ M+ P + +G ++ L K+ +L +ME + P ++
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I+ C ++ A ++ + +G PN +T+++LI +C+ G S A DMI
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + T+ LI+ K G+ A +L + + ++ P+ V
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 64/153 (41%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ PP I + +L L K + + ++ + P + T I+I C
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G++ + + N+ +G P+ + + T+I G C G +A +M G N
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
Y LI + G+ +A+ +L++ + +A
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDA 606
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 123 bits (309), Expect = 6e-29, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ V+ F M+ P P I F ++L ++AK N VISL QM+ GI+ N+ T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEI------------- 120
ILINCFC +++ A +VL ++K GY P+ +T +L+ G CH I
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 121 ----------------------SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
S+A+ D M+ KG Q + VTYG+++NGLCK G+ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 159 LQLLRRIEELAVQPNAV 175
L LL+++E+ ++P V
Sbjct: 241 LSLLKKMEQGKIEPGVV 257
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ I+ +L + ++L +M+ KGI PN+VT LI C C+ GR + A +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC- 150
L ++++R +PN +TF+ LI G++ +A +D+MI + + TY LING C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 151 --KAGETKAALQLL 162
+ E K +L+
Sbjct: 374 HDRLDEAKHMFELM 387
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 79/163 (48%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ + VS M+ M P F ++ L + N ++L +M KG P++VT
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
I++N C G I+ A S+L + + P + + T+I +C+ ++ A++ +M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KG + N VTY LI LC G A +LL + E + PN V
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++A V+ M+ P + +G ++ L K+ +SL ++ME I P +V
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I+ C+ +N A ++ + +G PN +T+ +LI+ +C+ G S A DMI
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N VT+ LI+ K G+ A +L + + ++ P+
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ L +M + I P++ T + LIN FC R
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + PN +T+ TLIKG C + + M +M +G N VTY
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+G +A E A + +++ V P+
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 76/162 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K + L R+M +G+ N VT T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ F + A V ++ G P+ +T++ L+ G+C+NG++ A+ + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + TY ++I G+CKAG+ + L + V+PN V
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 62/117 (52%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
+QM G+ P+++T +IL++ C+ G++ A V + + P+ T+ +I+GMC
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G++ + KG + N VTY +++G C+ G + A L R ++E P++
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ DN F M+ P I + +L L T + + ++ + P++ T
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+I C G++ + + ++ +G PN +T+TT++ G C G +A +M +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
G + TY LI + G+ A+ +L+R +
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 96/162 (59%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K ++ ++ F M +P P I F +L ++AK N VISL R +E GI+ ++ + T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+CFC R++ A S LG ++K G+ P+ +TF +L+ G CH +AM D ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ N V Y +I+ LC+ G+ AL +L+ ++++ ++P+ V
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M P + F ++ K+ +M + + PN+VT LIN C G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A VL ++ +G+ PN +T+ TLI G C + M M G + TY
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
L G C+AG+ AA ++L R+ V P+
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
++ + P + ++ I+ SL +K T + + + M+ GI P++VT LI H G
Sbjct: 174 QIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSG 233
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ +L ++++ G P+ ITF+ LI G++ +A +++MI + N VTY
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LINGLC G A ++L + PNAV
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I FG ++ N + +SL Q+ G PN+V +I+ C G+
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N A VL ++ K G P+ +T+ +LI + H+G + DM+ G + +T+
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ K G+ A + + + +V PN V
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M G+ + T L +C G+ + A VLG ++ G HP+ TF L+ G+C +G+
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
I KA+ +D+ +TY ++I GLCKA + + A L + V P+ +
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
KG PN VT LIN +C R++ +L + + G +T T+ TL +G C G+ S
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A M++ G + T+ +L++GLC G+ AL R+E+L V
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV---RLEDLQKSKTVV 427
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P+M T IL++ C G+I A L ++ K IT+ +IKG+C ++ A
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ + KG + +TY ++ GL + + A +L R++++
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQK 492
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 119 bits (299), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ ++ + F M+H P P I F +L + A TVI S++ME GI+ ++ + T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILI+CFC R++FA SVLG ++K GY P+ +TF +L+ G C I A M+
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ N V Y LI+GLCK GE AL+LL +E+ + + V
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I FG +L N SL M G PN+V LI+ C G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N A +L + K+G + +T+ TL+ G+C++G S A DM+ + + VT+
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ K G A +L + + + +V PN V
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ + S + M+ P + ++ ++ L K + L +ME KG+ ++VT
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
L+ C+ GR + A +L +++KR +P+ +TFT LI G + +A + +MI
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N VTY +INGLC G A + + PN V
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K + L ++M +G ++ T LI+ +C +G++ A +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ R P+ IT L+ G+C NGEI A+ DDM V Y ++I+GLCK
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
A + + A +L R+ V+P+A
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDA 456
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P + F ++ K+ + L ++M + PN VT +IN C GR
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A + +G PN +T+ TLI G C + + M M +GF + TY
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+G C+ G+ + AL + + V P+ +
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + +L L + R M + I P++VT T LI+ F G ++ A +
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+++ PN +T+ ++I G+C +G + A D M +KG N VTY LI+G CK
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 154 ETKAALQLLRRI 165
++L +R+
Sbjct: 331 MVDEGMKLFQRM 342
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + M+ + P + I+ L + M KG PN+VT L
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ FC ++ + + G++ + T+ TLI G C G++ A+ M+++
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Query: 136 QFNQVTYGVLINGLCKAGETKAAL 159
+ +T+ +L++GLC GE ++AL
Sbjct: 383 TPDIITHCILLHGLCVNGEIESAL 406
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 119 bits (298), Expect = 9e-28, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 88/162 (54%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K ++ + F M+ P P F + ++A+ V+ + ME GI +M T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+INC+C ++ FAFSVLG K GY P+TITF+TL+ G C G +S+A+ D M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + VT LINGLC G AL L+ R+ E QP+ V
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Score = 91.7 bits (226), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 75/136 (55%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ K+N + M KG P++VT +ILIN +C R++ +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
I +G PNTIT+ TL+ G C +G+++ A +M+++G + VTYG+L++GLC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 152 AGETKAALQLLRRIEE 167
GE AL++ ++++
Sbjct: 468 NGELNKALEIFEKMQK 483
Score = 83.2 bits (204), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ S K + L R++ KG+ PN +T L+ FC G++N A +
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ RG P+ +T+ L+ G+C NGE++KA+ + M Y ++I+G+C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + A L + + V+P+ V
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVV 526
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ +S F M + + ++G L + R+M + I P++VT + L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ F G++ A + ++ RG P+TIT+ +LI G C + +A D M++KG
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + VTY +LIN CKA ++L R I + PN +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ M+ N P + F ++ K+ L +M +GI P+ +T
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ FC ++ A + ++ +G P+ +T++ LI C + M ++ +K
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G N +TY L+ G C++G+ AA +L + + V P+ V
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M N + + ++ SL K +SL +ME KGI ++VT + LI C+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G+ + +L ++ R P+ +TF+ LI G++ +A +++MI +G + +T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y LI+G CK A Q+ + +P+ V
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 70/144 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +G +L L K + + L R+ME + I ++V +I+I+ C G + A S+
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G + +T+++LI G+C++G+ +MI + + VT+ LI+ K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ A +L + + P+ +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTI 351
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 66/151 (43%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M P + ++ L K + L +M G P+ VT ++N C G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
A + + +R + + ++ +I +C +G A+ ++M KG + + VTY
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI GLC G+ ++LR + + P+ V
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ PP + +G +L L + + +M+ +T + I+I+ C+
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+++ A+S+ ++ +G P+ +T+ +I G+C G +S+A M G + T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAV 170
Y +LI ++++L IEE+ V
Sbjct: 563 YNILIRAHLGGSGLISSVEL---IEEMKV 588
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ V F M+ P P I F ++L ++AK N VISL QM+ GI+ ++ T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I INCFC +++ A +VL ++K GY P+ +T ++L+ G CH+ IS A+ D M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 134 GF-----------------------------------QFNQVTYGVLINGLCKAGETKAA 158
G+ Q + VTYG ++NGLCK G+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 159 LQLLRRIEELAVQPNAV 175
L LL ++E ++ N V
Sbjct: 243 LNLLNKMEAARIKANVV 259
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ +F I+ SL K H + L +ME KGI PN+VT LINC C+ GR + A +L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
N+L++ +PN +TF LI G++ +A H++MI + + +TY +LING C
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 154 ETKAALQLLRRIEELAVQPN 173
A Q+ + + PN
Sbjct: 378 RLDEAKQMFKFMVSKDCLPN 397
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ + V+ M+ M P F ++ L N ++L QM +G P++VT
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
++N C G I+ A ++L + N + F T+I +C + A+ +M K
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + N VTY LIN LC G A +LL + E + PN V
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ ++L +ME I N+V
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I+ C + A + + +G PN +T+ +LI +C+ G S A +M+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
K N VT+ LI+ K G+ A +L + + ++ P+ +
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
+ML P + F ++ + K+ L +M + I P+ +T +LIN FC
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R++ A + ++ + PN T+ TLI G C + + +M +G N VTY
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 144 VLINGLCKAGETKAALQLLRRI 165
+I G +AG+ +A + +++
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQM 459
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ + P + ++ N + + M K PN+ T LIN FC
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R+ + + +RG NT+T+TT+I+G G+ A M++ + +TY
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
+L++GLC G+ AL + + +++ ++ N
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 3/163 (1%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ D F M+ + P I + ++ K + L R+M +G+ N VT
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T +I F G + A V ++ + +T++ L+ G+C G++ A+ +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ N Y +I G+CKAG+ A L L+++P+ V
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---SLSIKPDVV 536
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 57 SRQMEFKGITPNMV-----TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
S QM FK + N V T +IL++ C G+++ A + + K N + T+I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
+GMC G++ +A D + + + VTY +I+GLC + A L R+++E
Sbjct: 511 EGMCKAGKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 172 PNA 174
PN+
Sbjct: 568 PNS 570
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 116 bits (291), Expect = 7e-27, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ V F M+ P P I F ++L ++AK N VISL QM+ GI+ ++ T +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA---------- 123
I INCFC +++ A +VL ++K GY P+ +T ++L+ G CH+ IS A
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 124 ---------------MHFH----------DDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
+ H D M+ +G Q + VTYG ++NGLCK G+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 159 LQLLRRIEELAVQPNAV 175
L LL+++E+ ++ + V
Sbjct: 243 LSLLKKMEKGKIEADVV 259
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ I+ L K H ++L +M+ KGI P++ T + LI+C C+ GR + A +L
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC--- 150
++++R +PN +TF+ LI G++ +A +D+MI + + TY LING C
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 151 KAGETKAALQLL 162
+ E K +L+
Sbjct: 378 RLDEAKHMFELM 389
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 77/162 (47%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K + L R+M +G+ N VT T
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ F + A V ++ G HPN +T+ L+ G+C NG+++KAM + +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + TY ++I G+CKAG+ + +L + V PN +
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 72/149 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ L +M + I P++ T + LIN FC R
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + PN +T++TLIKG C + + M +M +G N VTY
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+G +A + A + +++ + V PN
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ M P F ++ L N ++L QM +G P++VT ++N C G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
I+ A S+L + K + + + T+I G+C + A++ +M KG + + TY
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ LC G A +LL + E + PN V
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 61/117 (52%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
+QM G+ PN++T IL++ C G++ A V + + P+ T+ +I+GMC
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G++ ++ KG N + Y +I+G C+ G + A LL++++E PN+
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 76/161 (47%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ +SL ++ME I ++V
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I+ C ++ A ++ + +G P+ T+++LI +C+ G S A DMI
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N VT+ LI+ K G+ A +L + + ++ P+
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 67/159 (42%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN F M+ + P I + +L L K + + ++ + P++ T I+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I C G++ + + N+ +G PN I + T+I G C G +A M G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
N TY LI + G+ +A+ +L++ + +A
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
+ KG++PN++ +I+ FC G A S+L + + G PN+ T+ TLI+ +G+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ +M + GF + T G++ N L K+ L +L
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ + F M+ P P I F ++L ++AK VISL +M+ GI+ N+ T
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILINCFC +I+ A ++LG ++K GY P+ +T ++L+ G CH IS A+ D M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 134 GF-----------------------------------QFNQVTYGVLINGLCKAGETKAA 158
G+ Q N VTYGV++NGLCK G+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 159 LQLLRRIEELAVQPNAV 175
LL ++E ++ N V
Sbjct: 245 FNLLNKMEAAKIEANVV 261
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ ++ SL K H ++L +ME KG+ PN++T + LI+C C+ R + A +L
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC--- 150
++++R +PN +TF LI G++ +A +D+MI + + TY LING C
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 151 KAGETKAALQLL 162
+ E K +L+
Sbjct: 380 RLDEAKHMFELM 391
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+ D F M+ + P + + ++ K + L R+M +G+ N VT
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T LI+ F + A V ++ G HPN +T+ TL+ G+C NG++ KAM + +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ TY ++I G+CKAG+ + L + V+P+ +
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ + V+ M+ M P F ++ L N ++L +M +G PN+VT
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+++N C G I+ AF++L + N + ++T+I +C A++ +M K
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + N +TY LI+ LC A +LL + E + PN V
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I +L ++L QM G P+ +T T LI+ +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A +++ +++RG PN +T+ ++ G+C G+I A + + M A + N V Y
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I+ LCK AL L +E V+PN +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ +L +ME I N+V
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+ +I+ C + A ++ + +G PN IT+++LI +C+ S A DMI
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N VT+ LI+ K G+ A +L + + ++ P+
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M+ + P I + ++ + + M K PN+VT LIN FC
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
RI+ + + +RG NT+T+TTLI G + A M++ G N +T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQP 172
Y L++GLCK G+ + A+ + ++ ++P
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ P + F ++ + K+ L +M + I P++ T + LIN FC
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R++ A + ++ + PN +T+ TLI G C I + + +M +G N VTY
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+G +A + A + +++ V PN
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D V F M + ++ + C + +QM G+ PN++T
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L++ C G++ A V + + P T+ +I+GMC G++ + K
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G + + + Y +I+G C+ G + A L R++ E P++
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 116 bits (290), Expect = 9e-27, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D V F M+ P P I F ++L ++AK VIS +ME G++ N+ T
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+INC C +++FA ++LG ++K GY P+ +T +L+ G CH IS+A+ D M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 134 G---------------FQFNQ--------------------VTYGVLINGLCKAGETKAA 158
G FQ N+ VTYG +INGLCK GE A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 159 LQLLRRIEELAVQPNAV 175
L LL ++E+ ++ + V
Sbjct: 225 LNLLNKMEKGKIEADVV 241
Score = 86.7 bits (213), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ ++ SL K H ++L +M+ KGI P++ T + LI+C C+ GR + A +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++L+R +PN +TF +LI G++ +A D+MI + N VTY LING C
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
A Q+ + P+ V
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVV 381
Score = 76.6 bits (187), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K + L R M +G+ N VT T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ F + A V ++ G HPN +T+ TL+ G+C NG++ KAM + +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + TY ++ G+CKAG+ + L + V+P+ +
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 70/149 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P + F ++ + AK+ L +M + I PN+VT LIN FC R
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + P+ +T+ TLI G C ++ M DM +G N VTY
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+G +A + A + +++ V PN
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 71/152 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ M P F ++ L + N ++L +M KG P++VT +IN C G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A ++L + K + + ++T+I +C + A++ +M KG + + TY
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ LC G A +LL + E + PN V
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 71/152 (46%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ + P I + ++ + + M K P++VT LIN FC
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
++ + ++ +RG NT+T+TTLI G + A M++ G N +T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
Y L++GLCK G+ + A+ + +++ ++P+
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 77/163 (47%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ ++L +ME I ++V
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+ +I+ C ++ A ++ + +G P+ T+++LI +C+ G S A DM+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ N VT+ LI+ K G+ A +L + + ++ PN V
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 62/150 (41%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN F M+ P I + +L L K + + ++ + P++ T I+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
C G++ + + ++ +G P+ I + T+I G C G +A M G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+ TY LI + G+ A+ +L++ +
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 115 bits (287), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ + F M+ P P I F ++L ++AK N VISL QM+ GI+ N+ T +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I IN FC +++ A ++LG ++K GY P+ +T +L+ G CH IS+A+ D M+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 134 G---------------FQFNQ--------------------VTYGVLINGLCKAGETKAA 158
G FQ N+ VTYG +INGLCK GE A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 159 LQLLRRIEELAVQPNAV 175
L LL ++E+ ++ + V
Sbjct: 235 LNLLNKMEKGKIEADVV 251
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ I+ L K H L +ME KGI P++ T LI+C C+ GR + A +L
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF-NQVTYGVLINGLCKA 152
++L++ +P+ + F LI G++ +A +D+M+ F + V Y LI G CK
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 153 GETKAALQLLRRIEELAVQPNAV 175
+ +++ R + + + N V
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTV 392
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K + + R+M +G+ N VT T LI+ F + A V
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ G HP+ +T+ L+ G+C+NG + A+ + M + + + VTY +I LCK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG+ + L + V+PN V
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVV 497
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ M P F ++ L + N ++L +M KG P++VT +IN C G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A ++L + K + + + T+I G+C + A + M KG + + TY
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ LC G A +LL + E + P+ V
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 61/117 (52%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
+QM G+ P+++T IL++ C+ G + A V + KR + +T+TT+I+ +C
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G++ + KG + N VTY +++G C+ G + A L ++E PN+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 70/159 (44%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN F M+ P I + +L L + T + + M+ + + ++VT T +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I C G++ + + ++ +G PN +T+TT++ G C G +A +M G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
N TY LI + G+ A+ +L++ + +A
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
+ KG+ PN+VT T +++ FC G A ++ + + G PN+ T+ TLI+ +G+
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ + +M + GF + T+G++ N L K+ L +L
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 114 bits (285), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ + F M+ P P I F ++L ++AK VISL +M+ I + T
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILINCFC +I+ A ++LG ++K GY P+ +T ++L+ G CH IS A+ D M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 134 GF-----------------------------------QFNQVTYGVLINGLCKAGETKAA 158
G+ Q N VTYGV++NGLCK G+T A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 159 LQLLRRIEELAVQPNAV 175
L LL ++E ++ + V
Sbjct: 245 LNLLNKMEAAKIEADVV 261
Score = 90.5 bits (223), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ +F I+ SL K H ++L ++ME KGI PN+VT + LI+C C GR + A +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+++++ +PN +TF LI G+ +A +DDMI + + TY L+NG C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 154 ETKAALQLL 162
A Q+
Sbjct: 380 RLDKAKQMF 388
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 70/152 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ M P F ++ L N ++L +M +G PN+VT +++N C G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A ++L + + + F T+I +C + A++ +M KG + N VTY
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ LC G A QLL + E + PN V
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K L R+M +G+ + VT T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI H G + A V ++ G P+ +T++ L+ G+C+NG++ KA+ D M
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + Y +I G+CKAG+ L + V+PN V
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 71/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I +L ++L QM G P+ +T T LI+ +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A +++ +++RG PN +T+ ++ G+C G+ A++ + M A + + V +
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I+ LCK AL L + +E ++PN V
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 75/161 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ ++ F M H + ++ L C + +QM G+ P+++T +
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL++ C+ G++ A V + K + +TT+I+GMC G++ + K
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G + N VTY +I+GLC + A LL++++E PN+
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 75/161 (46%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ ++L +ME I ++V
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I+ C ++ A ++ + +G PN +T+++LI +C G S A DMI
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
K N VT+ LI+ K G+ A +L + + ++ P+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 67/149 (44%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ L M + I P++ T L+N FC R
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + P+ +T+ TLIKG C + + +M +G + VTY
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI GL G+ A ++ +++ V P+
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 64/150 (42%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN F M+ PP I + +L L + + M+ I ++ T +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I C G+++ + + ++ +G PN +T+ T+I G+C + +A M G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRI 165
N TY LI + G+ A+ +L+R +
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 35/195 (17%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ + F M P P I F ++L ++AK N VIS +ME GI+ N+ T IL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 76 INCF-----------------------------------CHLGRINFAFSVLGNILKRGY 100
INCF CH RI+ A +++ +++ GY
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
P+T+TFTTLI G+ + + S+A+ D M+ +G Q + VTYG ++NGLCK G+T AL
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 161 LLRRIEELAVQPNAV 175
LL ++E ++ N V
Sbjct: 240 LLNKMEAAKIEANVV 254
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ ++ SL K H ++L +ME KG+ PN++T + LI+C C+ GR + A +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC--- 150
++++R +PN +TF+ LI G++ KA +++MI + N TY LING C
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
+ GE K L+L+ R + L PN V
Sbjct: 373 RLGEAKQMLELMIRKDCL---PNVV 394
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ P + F ++ + KK L +M + I PN+ T + LIN FC L
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R+ A +L ++++ PN +T+ TLI G C + K M +M +G N VTY
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+G +A + A + +++ + V PN
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ ++L +ME I N+V
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+ +I+ C + A ++ + +G PN IT+++LI +C+ G S A DMI
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N VT+ LI+ K G+ A +L + + ++ PN
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P + + ++ K + L R+M +G+ N VT T LI+ F
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A V ++ G HPN +T+ L+ G+C NG+++KAM + + + + TY +
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 145 LINGLCKAGETK 156
+I G+CKAG+ K
Sbjct: 504 MIEGMCKAGKWK 515
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ + V+ M+ M P F ++ L N ++L +M +G P++VT
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
++N C G + A ++L + N + ++T+I +C A++ +M
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KG + N +TY LI+ LC G A +LL + E + PN V
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 112 bits (281), Expect = 9e-26, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 86/162 (53%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K ++ + F M+ P P I F +L ++ K VISL ++ME GI ++ T
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+INCFC +++ A S+LG +LK GY P+ +T +L+ G C +S A+ D M+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ + V Y +I+ LCK A + IE ++PN V
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV 226
Score = 85.9 bits (211), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 72/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML + P G ++ ++N +SL +M G P++V +I+ C R
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N AF I ++G PN +T+T L+ G+C++ S A DMI K N +TY
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
L++ K G+ A +L + +++ P+ V
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 75/150 (50%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ + VS M+ + P I + I+ SL K +++E KGI PN+VT
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T L+N C+ R + A +L +++K+ PN IT++ L+ NG++ +A ++M+
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ VTY LINGLC A Q+
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 68/146 (46%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ M+ P I + ++ L + + M KG ++V+ LIN FC
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
R+ + + +RG NT+T+ TLI+G G++ KA F M G + T
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 142 YGVLINGLCKAGETKAALQLLRRIEE 167
Y +L+ GLC GE + AL + +++
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQK 428
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ L R+M +G+ N VT LI F G ++ A + G P+ T+ L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+C NGE+ KA+ +DM + + VTY +I G+CK G+ + A L + ++P+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 174 AV 175
V
Sbjct: 470 IV 471
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
QM+F GI+P++ T IL+ C G + A + ++ KR + +T+TT+I+GMC G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEEL 168
++ +A + KG + + VTY +++GLC G LL +E L
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG-------LLHEVEAL 492
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + + +L + K L +M I P++VT + LIN C R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ A + ++ +G + +++ TLI G C + M +M +G N VTY
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI G +AG+ A + +++ + P+
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D F M P I + +LG L + + M+ + + ++VT T +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I C G++ A+S+ ++ +G P+ +T+TT++ G+C G + + + M +G
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 136 QFNQVT 141
N T
Sbjct: 502 MKNDCT 507
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (280), Expect = 1e-25, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 35/197 (17%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ V F M+ P P I F ++L ++AK N VISL +M+ I+ ++ +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA---------M 124
ILINCFC ++ A +VLG ++K GY P+ +T ++L+ G CH IS+A M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 125 HFH--------------------------DDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
+ D M+A+G Q + TYG ++NGLCK G+ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 159 LQLLRRIEELAVQPNAV 175
L LL+++E+ ++ + V
Sbjct: 240 LSLLKKMEKGKIEADVV 256
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ I+ +L + ++L +M+ KGI PN+VT LI C C+ GR + A +L
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC--- 150
++++R +PN +TF+ LI G++ +A +D+MI + + TY LING C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 151 KAGETKAALQLL 162
+ E K +L+
Sbjct: 375 RLDEAKHMFELM 386
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ L +M + I P++ T + LIN FC R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + PN +T+ TLIKG C + + M +M +G N VTY
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI GL +AG+ A ++ +++ V P+ +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ +SL ++ME I ++V
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T +I+ C+ +N A ++ + +G PN +T+ +LI+ +C+ G S A DMI
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N VT+ LI+ K G+ A +L + + ++ P+
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M M P F ++ L N ++L +M +G P++ T ++N C G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
I+ A S+L + K + + +TT+I +C+ ++ A++ +M KG + N VTY
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI LC G A +LL + E + PN V
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 59/107 (55%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN+VT LI FC R+ + + +RG NT+T+ TLI+G+ G+ A
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
M++ G + +TY +L++GLCK G+ + AL + +++ ++P+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L + C + ++M G+ P+++T +IL++ C G++ A V +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K P+ T+ +I+GMC G++ + KG + N + Y +I+G C+ G +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 157 AALQLLRRIEELAVQPNA 174
A L R ++E PN+
Sbjct: 553 EADALFREMKEDGTLPNS 570
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K + L R+M +G+ N VT
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI G + A + ++ G P+ IT++ L+ G+C G++ KA+ + +
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + TY ++I G+CKAG+ + L + V+PN +
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ PP I + +L L K + + ++ + P++ T I+I C
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G++ + + ++ +G PN I +TT+I G C G +A +M G N T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 142 YGVLINGLCKAGETKAALQLLRRI 165
Y LI + G+ A+ +L++ +
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEM 596
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
+ KG+ PN++ T +I+ FC G A ++ + + G PN+ T+ TLI+ +G+
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ + +M + GF + T ++IN L K+ L++L
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 111 bits (277), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 88/151 (58%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P P I F ++L ++AK VISL +M+ GI+ N+ T ILINCFC +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ A ++LG ++K GY P+ +T ++L+ G CH IS A+ D M+ G++ + +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+GL + A+ L+ R+ + QPN V
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Score = 93.2 bits (230), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 70/129 (54%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ +F I+ SL K H ++L ++ME KGI PN+VT + LI+C C GR + A +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+++++ +PN +TF LI G+ +A HDDMI + + TY LING C
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 154 ETKAALQLL 162
A Q+
Sbjct: 305 RLDKAKQMF 313
Score = 79.7 bits (195), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 72/152 (47%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ M P F ++ L N ++L +M +G PN+VT +++N C G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
I+ AF++L + + + F T+I +C + A++ +M KG + N VTY
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+ LC G A QLL + E + PN V
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ K L R+M +G+ + VT T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI H G + A V ++ G P+ +T++ L+ G+C+NG++ KA+ D M
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + Y +I G+CKAG+ L + V+PN V
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I +L ++L QM G P+ +T T LI+ +
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A +++ +++RG PN +T+ ++ G+C G+I A + + M A + + V +
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I+ LCK AL L + +E ++PN V
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 75/161 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ ++ F M H + ++ L C + +QM G+ P+++T +
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL++ C+ G++ A V + K + +TT+I+GMC G++ + K
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G + N VTY +I+GLC + A LL++++E P++
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Score = 67.0 bits (162), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KA V+ M+ P + +G ++ L K+ +L +ME I ++V
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I+ C ++ A ++ + +G PN +T+++LI +C G S A DMI
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
K N VT+ LI+ K G+ A +L + + ++ P+
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ L M + I P++ T LIN FC R
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + ++ + P+ T+ TLIKG C + + +M +G + VTY
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI GL G+ A ++ +++ V P+
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 64/150 (42%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN F M+ PP I + +L L + + M+ I ++ T +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I C G+++ + + ++ +G PN +T+ T+I G+C + +A M G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+ TY LI + G+ A+ +L+R +
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
+ + F M+ P P I F ++L +AK + VISL ME GI ++ + I+
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
INC C R A SV+G ++K GY P+ +T ++LI G C + A+ M GF
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + V Y +I+G CK G A++L R+E V+ +AV
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 15 ADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
++ V F M + ++ L L R M + I PN++T T
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
+I+ F G+ + A + + +R P+ T+ +LI G+C +G + +A D M+ KG
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ VTY LING CK+ +L R + +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ P + ++ + N F I L +ME G P++V +I+ C +G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+N A + + + G + +T+ +L+ G+C +G S A DM+ + N +T+
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+I+ K G+ A++L + V P+
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M M P + ++ I+ K + L +ME G+ + VT L+ C G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R + A ++ +++ R PN ITFT +I G+ S+AM +++M + + TY
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LINGLC G A Q+L + P+ V
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ + P + F ++ K+ + L +M + + P++ T LIN C G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R++ A +L ++ +G P+ +T+ TLI G C + + + +M +G + +TY
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
+I G +AG AA ++ R++ +PN
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDS---RPN 380
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K L R+M +G+ + +T +I + GR + A +
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ R PN T++ L+ G+C N + KA+ ++M + + TY ++I+G+CK
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G + A L R + ++P+ V
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVV 452
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN+ T +IL+ C R+ A + N+ K + T+ +I GMC G + A
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ KG + + V+Y +I+G C+ + + L R+++E + P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 84/154 (54%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F HM+ P P I F ++L +AK VI+L ++ G++ ++ T +L+NCFC
Sbjct: 60 FTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQ 119
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A S LG ++K G+ P+ +TFT+LI G C + +AM + M+ G + + V
Sbjct: 120 SSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y +I+ LCK G AL L ++E ++P+ V
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ + +S M+ M P + ++ I+ SL K H +SL QME GI P++V
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T L+N C+ GR A S+L + KR P+ ITF LI G+ A +++MI
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N TY LING C G A Q+ +E P+ V
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKR-- 98
G + K N V S M +G+ PN+ T +L++C C+ G++ A + ++ KR
Sbjct: 362 FGQVGKPNVAQEVFS---HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 99 -GYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKA 157
G PN T+ L+ G+C+NG++ KA+ +DM + +TY ++I G+CKAG+ K
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 158 ALQLLRRIEELAVQPNAV 175
A+ L + V+PN V
Sbjct: 479 AVNLFCSLPSKGVKPNVV 496
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 20 SSFL-HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
SSFL M+ + P I F ++ N +S+ QM GI P++V T +I+
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C G +N+A S+ + G P+ + +T+L+ G+C++G A M + + +
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+T+ LI+ K G+ A +L + +++ PN
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ M+ P I + ++ + + ME KG P++V T LIN FC
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 331
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+++ A + + ++G NTIT+TTLI+G G+ + A M+++G N TY
Sbjct: 332 KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN 391
Query: 144 VLINGLCKAGETKAALQL---LRRIEELAVQPN 173
VL++ LC G+ K AL + +++ E V PN
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ + K+ L +M I PN+ T T LIN FC G ++ A +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G P+ + +T+LI G C ++ AM +M KG N +TY LI G +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+ A ++ + V PN
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPN 386
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 22 FLHMLHMNPPPPITLFGEILGSL---AKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
F HM+ PP I + +L L K + ++ E G+ PN+ T +L++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C+ G++ A V ++ KR IT+T +I+GMC G++ A++ + +KG + N
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAV 170
VTY +I+GL + G A L R+++E V
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 102 bits (255), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 50/210 (23%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ + F +M+ P +++G + N ISL R+ME + I N+ + IL
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH-------- 127
I CFC +++F+ S G + K G+ P+ +TF TL+ G+C IS+A+
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 128 ------------------------------------------DDMIAKGFQFNQVTYGVL 145
+ M+ KG + VTYG +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 146 INGLCKAGETKAALQLLRRIEELAVQPNAV 175
+NG+CK G+TK+AL LL ++EE ++P+ V
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 75/157 (47%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
V+ F M+ + P + F ++ L + +L +M KG+ ++VT ++N
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C +G A ++L + + P+ + ++ +I +C +G S A + +M+ KG N
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY +I+G C G A +LLR + E + P+ +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 68/150 (45%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM + P + F I+ + + L R++ +G+ N T LI+ FC +
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+N A + ++ G P+TIT L+ G C N ++ +A+ + + + V Y
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
++I+G+CK + A L + V+P+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ I+ L K H L +M KGI PN+ T +I+ FC GR + A +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++++R +P+ +TF LI G++ +A D+M+ + + VTY +I G CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + +L P+ V
Sbjct: 414 HNRFDDAKHMF----DLMASPDVV 433
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 66/142 (46%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ +G I+ + K + ++L +ME I P++V + +I+ C G + A +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+L++G PN T+ +I G C G S A DMI + + +T+ LI+ K G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ A +L + + P+ V
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTV 402
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 10/154 (6%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ F L +M + I P+ VT +I FC R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 85 INFA---FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A F ++ + P+ +TF T+I C + + M ++ +G N T
Sbjct: 417 FDDAKHMFDLMAS-------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y LI+G C+ AA L + + V P+ +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 51 FTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTL 110
F VI +S+ I + V I+I+ C +++ A+ + ++ G P+ T+ +
Sbjct: 525 FEVIQMSK------IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 111 IKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
I G C IS A M G + + TY LI G KAGE +++L+ +
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ T ++I+ FC I+ A + + G+ P+ T+ TLI+G GEI K+
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
+ +M + GF + T + +C+ + + LR
Sbjct: 627 IELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLR 666
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 84/160 (52%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
++ + F M+H P P I F +L +AK N VISL QM+ GI P + T I+
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
++C C + A LG ++K G+ P+ +TFT+L+ G CH I A+ D ++ GF
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ N VTY LI LCK A++L ++ +PN V
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ ++ ++ F +L M P + + ++ L K H + L QM G PN+VT
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
L+ C +GR A +L +++KR PN ITFT LI G++ +A ++ MI
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ TYG LINGLC G A Q+ +E PN V
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M KG+ N +T T+LI +C +GR + A V + R P+ T+ L+ G+C NG
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ KA+ + M + N VTY ++I G+CK G+ + A L + ++PN +
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 20 SSFL-HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
S FL M+ + P + F +L N I+L Q+ G PN+VT T LI C
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C +N A + + G PN +T+ L+ G+C G A DM+ + + N
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+T+ LI+ K G+ A +L + +++V P+
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQM----EFKGITPNMVTSTILINCFC 80
M+ M+ P + +G ++ L + ++ +RQM E G PN V T LI+ FC
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCM----YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
R+ + + ++G NTIT+T LI+G C G A + M ++ +
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY VL++GLC G+ + AL + + + + N V
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
QM + P++ T +L++ C G++ A + + KR N +T+T +I+GMC G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ A + +KG + N +TY +I+G C+ G A L ++++E PN
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M PP I + +L L + + M + + N+VT T
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+I C LG++ AF + ++ +G PN IT+TT+I G C G I +A M
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 134 GFQFNQVTY 142
GF N+ Y
Sbjct: 498 GFLPNESVY 506
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K L M + P++ T LIN C G
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A + + + G +PN + +TTLI G C + + M +M KG N +TY V
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI G C G A ++ ++ P+
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 50/210 (23%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ + F +M+ P +++G + N ISL R+ME + I N+ + IL
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH-------- 127
I CFC +++F+ S G + K G+ P+ +TF TL+ G+C IS+A+
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 128 ------------------------------------------DDMIAKGFQFNQVTYGVL 145
+ M+ KG + VTYG +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 146 INGLCKAGETKAALQLLRRIEELAVQPNAV 175
+NG+CK G+TK+AL LL ++EE ++P+ V
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
V+ F M+ + P + F ++ L + +L +M KG+ ++VT ++N
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C +G A ++L + + P+ + ++ +I +C +G S A + +M+ KG N
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY +I+G C G A +LLR + E + P+ +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM + P + F I+ + + L R++ +G+ N T LI+ FC +
Sbjct: 422 HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+N A + ++ G P+TIT L+ G C N ++ +A+ + + + V Y
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNA 174
++I+G+CK + A L + V+P+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ I+ L K H L +M KGI PN+ T +I+ FC GR + A +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++++R +P+ +TF LI G++ +A D+M+ + + VTY +I G CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + +L P+ V
Sbjct: 414 HNRFDDAKHMF----DLMASPDVV 433
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 33 PITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVL 92
+ +G I+ + K + ++L +ME I P++V + +I+ C G + A +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
+L++G PN T+ +I G C G S A DMI + + +T+ LI+ K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 153 GETKAALQLLRRIEELAVQPNAV 175
G+ A +L + + P+ V
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTV 402
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 10/154 (6%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ F L +M + I P+ VT +I FC R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 85 INFA---FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A F ++ + P+ +TF T+I C + + M ++ +G N T
Sbjct: 417 FDDAKHMFDLMAS-------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y LI+G C+ AA L + + V P+ +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 51 FTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTL 110
F VI +S+ I + V I+I+ C +++ A+ + ++ G P+ T+ +
Sbjct: 525 FEVIQMSK------IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 111 IKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
I G C IS A M G + + TY LI G KAGE +++L+ +
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 89/162 (54%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ S F ML P P I F +L +AK N VI L +ME GI+ ++ + T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILI+CFC R++ A ++LG ++K G+ P+ +T +L+ G C +A+ D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
GF N V Y +INGLCK + AL++ +E+ ++ +AV
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K + L +M ++G+ + T LI+ +C G++N A V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ G P+ +T+ L+ +C+NG+I KA+ +D+ + +TY ++I GLC+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ K A L R + V+P+A+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAI 465
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ + K+ + +L ++M + + PN+ T LIN FC G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A + ++ +G P+ +T+ TLI G C + + M +M +G + TY
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+G C+AG+ A ++ R+ + V P+ V
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 64/110 (58%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G++P++VT IL++C C+ G+I A ++ ++ K + IT+ +I+G+C ++ +A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ KG + + + Y +I+GLC+ G + A +L RR++E P+
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P I G +L + N +SL M+ G PN+V +IN C
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N A V + K+G + +T+ TLI G+ ++G + A DM+ + N + +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNA 174
LI+ K G A L + + +V PN
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
+N + F M + ++ L+ L R M + I PN++ T L
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ F G + A ++ +++R PN T+ +LI G C +G + A + D M++KG
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLL 162
+ VTY LI G CK+ + ++L
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLF 347
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ L K + + ME KGI + VT LI+ + GR A +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +++KR PN I FT LI G + +A + + +MI + N TY LING C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 152 AG 153
G
Sbjct: 302 HG 303
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
KG P++VT LI FC R+ + + +G + T+ TLI G C G+++
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
A + M+ G + VTY +L++ LC G+ + AL ++ +++
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++++ ++ L K++ L R+M KGI+PN+++ + LIN C+ G+I AFS
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK-GFQFNQVTYGVLINGLC 150
L +LKRG HPN T ++L+KG G A+ + MI G Q N V Y L+ G C
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 151 KAGETKAALQLLRRIEELAVQPN 173
G A+ + +EE+ PN
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPN 386
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 15 ADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
A+ V F + P + ++ +L +L +N + + R M+ G PN+ T +
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
L+ C +++ A +L + +G P+ +++TT+I MC G + + +A+
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAER 241
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
F+ Y LINGLCK + K A +L+R + E + PN +
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 18 TVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
VS F HM + P I +G ++ AK+ + + +M G PN+V T ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK-GFQ 136
C + A S++ + K P+ TF IKG+C G + A M +
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRI 165
N VTY L++GL KA + A L R I
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
PP I + E+L LAK N L+R++ +G+ + T L++ C+ G A
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG---FQFNQVTYGVLIN 147
++G ++ G P+ IT +I C G+ +A D+++ G ++ + ++Y +I
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIW 608
Query: 148 GLCKAGETKAALQLLRRIEELAVQPN 173
GLC++ + + LL R+ + P+
Sbjct: 609 GLCRSNCREDGVILLERMISAGIVPS 634
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + +S+ ME G +PN+ T LIN F G ++ A +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L G PN + +T +++ +C + + +A + M + + T+ I GLC
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 152 AGETKAALQLLRRIEE 167
AG A ++ R++E+
Sbjct: 470 AGRLDWAEKVFRQMEQ 485
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Query: 21 SFL-HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQM-EFKGITPNMVTSTILINC 78
SFL ML P I ++ + F + L QM G+ PN+V L+
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
FC G I A SV ++ + G PN T+ +LI G G + A++ + M+ G N
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
V Y ++ LC+ + K A L+ + + P+
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 96.7 bits (239), Expect = 8e-21, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 81/154 (52%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F LH + +F + K T + ++M +GI+PN+VT TILI C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
GRI AF + G ILKRG P+ +T+++LI G C G + ++DMI G+ + V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
YGVL++GL K G A++ ++ +++ N V
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 75/152 (49%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ ML P + + ++ L + + + Q+ +G+ P++VT + LI+ FC
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G + F++ +++K GY P+ + + L+ G+ G + AM F M+ + + N V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ LI+G C+ AL++ R + ++P+
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
+L P P + F ++ K+ L + ME +GI P+++ + LI+ + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 85 INFAFSVLGNILKRGYH-----------------------------------PNTITFTT 109
+ + L +G PN +T+T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 110 LIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA 169
LIKG+C +G I +A + ++ +G + + VTY LI+G CK G ++ L + ++
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 170 VQPNAV 175
P+ V
Sbjct: 457 YPPDVV 462
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ P++VT +I +C L R++ A + + + PNT+T T LI +C N ++ A+
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M KG + N VTYG L++ K+ + + + +L ++E + P+ V
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 23 LHMLHMNPPPPITLFGEIL-GSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+L + P P T+ IL L K N I + M KG PN VT L++ F
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMH-FHDDMIAKGFQFNQV 140
I +F + + ++G P+ ++++ +I G+C G + +A + FH + AK + V
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP-DVV 748
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
Y +LI G CK G A L + V+P+
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILG---SLAKKNHCFTVISLSRQMEFKGITPNM 69
H+ ++ F +++ P I + ++ SL + + + L + F PN
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG---PNT 642
Query: 70 VTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDD 129
VT TILI+ C ++ A + + ++G PN +T+ L+ + +I + ++
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 130 MIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M KG + V+Y ++I+GLCK G A + + + + P+ V
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + F M P +G ++ +K L +M+ KGI+P++V+ +I+
Sbjct: 659 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 718
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ C GR++ A ++ + P+ + + LI+G C G + +A ++ M+ G
Sbjct: 719 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Query: 136 Q 136
+
Sbjct: 779 K 779
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P ++ G +L +L K + R + +G +V+ ++ + +I A
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASR 272
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+L +L G PN +TF TLI G C GE+ +A M +G + + + Y LI+G
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 151 KAG 153
KAG
Sbjct: 333 KAG 335
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M+ I+ ++ ++I+ RI A N+++ P+ +T+ T+I G C
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +A + + F N VT +LI+ LCK + A+++ + E +PNAV
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M PP + ++G ++ L+K+ + S +M + I N+V LI+ +C L R
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIK------GMCHNGEISKAMHFHDDMIAKGFQFN 138
+ A V + G P+ TFTT+++ C + + + + D M +
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
V+I+ L K + A + + E ++P+ V
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 96.7 bits (239), Expect = 8e-21, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 81/154 (52%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F LH + +F + K T + ++M +GI+PN+VT TILI C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
GRI AF + G ILKRG P+ +T+++LI G C G + ++DMI G+ + V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
YGVL++GL K G A++ ++ +++ N V
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 75/152 (49%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ ML P + + ++ L + + + Q+ +G+ P++VT + LI+ FC
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G + F++ +++K GY P+ + + L+ G+ G + AM F M+ + + N V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ LI+G C+ AL++ R + ++P+
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
+L P P + F ++ K+ L + ME +GI P+++ + LI+ + G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 85 INFAFSVLGNILKRGYH-----------------------------------PNTITFTT 109
+ + L +G PN +T+T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 110 LIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA 169
LIKG+C +G I +A + ++ +G + + VTY LI+G CK G ++ L + ++
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 170 VQPNAV 175
P+ V
Sbjct: 457 YPPDVV 462
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ P++VT +I +C L R++ A + + + PNT+T T LI +C N ++ A+
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M KG + N VTYG L++ K+ + + + +L ++E + P+ V
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Score = 63.2 bits (152), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 65/138 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ M PP + ++G ++ L+K+ + S +M + I N+V LI+ +C L R
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A V + G P+ TFTT+++ G + +A+ M G + + + Y
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 145 LINGLCKAGETKAALQLL 162
LI+ CK + LQL
Sbjct: 572 LIDAFCKHMKPTIGLQLF 589
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 23 LHMLHMNPPPPITLFGEIL-GSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+L + P P T+ IL L K N I + M KG PN VT L++ F
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMH-FHDDMIAKGFQFNQV 140
I +F + + ++G P+ ++++ +I G+C G + +A + FH + AK + V
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP-DVV 777
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
Y +LI G CK G A L + V+P+
Sbjct: 778 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILG---SLAKKNHCFTVISLSRQMEFKGITPNM 69
H+ ++ F +++ P I + ++ SL + + + L + F PN
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG---PNT 671
Query: 70 VTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDD 129
VT TILI+ C ++ A + + ++G PN +T+ L+ + +I + ++
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 130 MIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M KG + V+Y ++I+GLCK G A + + + + P+ V
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 66/154 (42%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M M P + ++ + K + L M+ I+ ++ ++I+
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
RI A N+++ P+ +T+ T+I G C + +A + + F N VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+LI+ LCK + A+++ + E +PNAV
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 57/121 (47%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + F M P +G ++ +K L +M+ KGI+P++V+ +I+
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ C GR++ A ++ + P+ + + LI+G C G + +A ++ M+ G
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 136 Q 136
+
Sbjct: 808 K 808
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P ++ G +L +L K + R + +G +V+ ++ + +I A
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASR 272
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+L +L G PN +TF TLI G C GE+ +A M +G + + + Y LI+G
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 151 KAG 153
KAG
Sbjct: 333 KAG 335
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.4 bits (233), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 79/153 (51%)
Query: 21 SFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
+F M+ P ++ ++ K+ +M + ITP+++T T +I+ FC
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
+G + A + + +G P+++TFT LI G C G + A H+ MI G N V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
TY LI+GLCK G+ +A +LL + ++ +QPN
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 91.3 bits (225), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 20 SSFLHMLH-MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
S F + +H + P + + I+ + L +M KG+ P+ VT T LIN
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
+C G + AF V ++++ G PN +T+TTLI G+C G++ A +M G Q N
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY ++NGLCK+G + A++L+ E + + V
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM+ P + + ++ L K+ + L +M G+ PN+ T ++N C G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
I A ++G G + +T+T+TTL+ C +GE+ KA +M+ KG Q VT+
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNA 174
VL+NG C G + +LL + + PNA
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Score = 84.0 bits (206), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 73/154 (47%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M P F E++ K H + M G +PN+VT T LI+ C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G ++ A +L + K G PN T+ +++ G+C +G I +A+ + A G + VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y L++ CK+GE A ++L+ + +QP V
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Score = 80.1 bits (196), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++G I+G L + +M +GI P+ V T LI+ FC G I A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ R P+ +T+T +I G C G++ +A +M KG + + VT+ LING CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG K A ++ + + PN V
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVV 457
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 17 NTVSSFLH-MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
++ + LH M + P I + I+ L K + + L + E G+ + VT T L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
++ +C G ++ A +L +L +G P +TF L+ G C +G + + M+AKG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
N T+ L+ C KAA + + + V P+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
LG + + +H + ME KG TP++++ + ++N +C G ++ + ++ + ++G
Sbjct: 259 LGRIKEAHHLLLL------MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
PN+ + ++I +C ++++A +MI +G + V Y LI+G CK G+ +AA +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 161 LLRRIEELAVQPNAV 175
+ + P+ +
Sbjct: 373 FFYEMHSRDITPDVL 387
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + V L M+ KG+ PN +I C + ++ A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++++G P+T+ +TTLI G C G+I A F +M ++ + +TY +I+G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ A +L + ++P++V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSV 422
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M KG+ P +VT +L+N FC G + +L +L +G PN TF +L+K C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
+ A + DM ++G + TY L+ G CKA K A L + ++
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
T I + R+ G+ N+ + I+I+ C LGRI A +L + +GY P+ I+++T++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G C GE+ K + M KG + N YG +I LC+ + A + + +
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 172 PNAV 175
P+ V
Sbjct: 349 PDTV 352
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M KGI PN T L+ +C + A ++ ++ RG P+ T+ L+KG C
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG---ETKAALQLLRR 164
+ +A +M KGF + TY VLI G K E + +RR
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.4 bits (233), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 79/153 (51%)
Query: 21 SFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
+F M+ P ++ ++ K+ +M + ITP+++T T +I+ FC
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
+G + A + + +G P+++TFT LI G C G + A H+ MI G N V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
TY LI+GLCK G+ +A +LL + ++ +QPN
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 91.3 bits (225), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 20 SSFLHMLH-MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
S F + +H + P + + I+ + L +M KG+ P+ VT T LIN
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
+C G + AF V ++++ G PN +T+TTLI G+C G++ A +M G Q N
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY ++NGLCK+G + A++L+ E + + V
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM+ P + + ++ L K+ + L +M G+ PN+ T ++N C G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
I A ++G G + +T+T+TTL+ C +GE+ KA +M+ KG Q VT+
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNA 174
VL+NG C G + +LL + + PNA
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Score = 84.0 bits (206), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 73/154 (47%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M P F E++ K H + M G +PN+VT T LI+ C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G ++ A +L + K G PN T+ +++ G+C +G I +A+ + A G + VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y L++ CK+GE A ++L+ + +QP V
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Score = 80.1 bits (196), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++G I+G L + +M +GI P+ V T LI+ FC G I A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ R P+ +T+T +I G C G++ +A +M KG + + VT+ LING CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG K A ++ + + PN V
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVV 457
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 17 NTVSSFLH-MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
++ + LH M + P I + I+ L K + + L + E G+ + VT T L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
++ +C G ++ A +L +L +G P +TF L+ G C +G + + M+AKG
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
N T+ L+ C KAA + + + V P+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
LG + + +H + ME KG TP++++ + ++N +C G ++ + ++ + ++G
Sbjct: 259 LGRIKEAHHLLLL------MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
PN+ + ++I +C ++++A +MI +G + V Y LI+G CK G+ +AA +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 161 LLRRIEELAVQPNAV 175
+ + P+ +
Sbjct: 373 FFYEMHSRDITPDVL 387
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + V L M+ KG+ PN +I C + ++ A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++++G P+T+ +TTLI G C G+I A F +M ++ + +TY +I+G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ A +L + ++P++V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSV 422
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M KG+ P +VT +L+N FC G + +L +L +G PN TF +L+K C
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
+ A + DM ++G + TY L+ G CKA K A L + ++
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
T I + R+ G+ N+ + I+I+ C LGRI A +L + +GY P+ I+++T++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G C GE+ K + M KG + N YG +I LC+ + A + + +
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 172 PNAV 175
P+ V
Sbjct: 349 PDTV 352
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M KGI PN T L+ +C + A ++ ++ RG P+ T+ L+KG C
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG---ETKAALQLLRR 164
+ +A +M KGF + TY VLI G K E + +RR
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 93.6 bits (231), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 79/142 (55%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ +G ++ + K + ++M+F G+ ++V T LI FC G ++ ++
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+L+RG P IT+ TLI+G C G++ +A + MI +G + N TY LI+GLC G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+TK ALQLL + E +PNAV
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAV 353
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 65/113 (57%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G +P +T LI FC LG++ A + +++RG PN T+T LI G+C G+ +
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A+ + MI K + N VTY ++IN LCK G A++++ +++ +P+ +
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 72/142 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + + L+ +M+ G + ++VT ILI+ FC G+++ A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G + + +T+LI+G C GE+ + D+++ +G +TY LI G CK
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+ K A ++ + E V+PN
Sbjct: 295 LGQLKEASEIFEFMIERGVRPN 316
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 35/171 (20%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ L + + S R+M N V+ + L+ C+ + + FAF VL +LKRG
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 100 Y-----------------------------------HPNTITFTTLIKGMCHNGEISKAM 124
+ P+ ++ T+I+G C E+ KA+
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++M G ++ VT+G+LI+ CKAG+ A+ L+ ++ + ++ + V
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 57/100 (57%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G+ PN+ T T LI+ C +G+ A +L ++++ PN +T+ +I +C +G ++
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
A+ + M + + + +TY +L+ GLC G+ A +LL
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ + P + I+ L K + + M+ + P+ +T IL+ C G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 85 INFAFSVLGNILKRGYH--PNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTY 142
++ A +L +LK + P+ I++ LI G+C + +A+ +D ++ K ++VT
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 143 GVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+L+N KAG+ A++L ++I + + N+
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L L + C +SL R+M + P++ + +I FC + A + + G
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ +T+ LI C G++ +AM F +M G + + V Y LI G C GE
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 160 QLLRRIEELAVQPNAV 175
L + E P A+
Sbjct: 268 ALFDEVLERGDSPCAI 283
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L S K + L +Q+ I N T T +I+ FC G +N A +L +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P+ + L+ +C G + +A ++M + V++ ++I+G KAG+ K+A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 160 QLLRRIEELAVQPN 173
LL + + P+
Sbjct: 585 SLLVGMSRAGLSPD 598
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + +L SL K+ L +M+ P++V+ I+I+ G I A S+
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + G P+ T++ LI G + +A+ F D M+ GF+ + ++
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 152 AGETKAALQLLRRI 165
GET +L++++
Sbjct: 647 QGETDKLTELVKKL 660
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K ++ ++ M P + + +L + + + R+M KGI P+ +T +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI FC R A + +L+ G P+ T+T LI C G++ KA+ H++M+ K
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
G + VTY VLINGL K T+ A +LL ++
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
ML P + + ++ S+ K + + QM +G+ PN T T L++ F G
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+N A+ VL + G+ P+ +T+ LI G C G++ A+ +DM KG + V+Y
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+++G C++ + AL++ R + E ++P+ +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K L R M KG+ PN+++ ++IN C GR+ V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +RGY + +T+ TLIKG C G +A+ H +M+ G + +TY LI+ +CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG A++ L ++ + PN
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPN 379
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 49 HCFT-----VISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPN 103
HC T I++ M+ KG++P++V+ + +++ FC ++ A V ++++G P+
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 104 TITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
TIT+++LI+G C +A +++M+ G ++ TY LIN C G+ + ALQL
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 164 RIEELAVQPNAV 175
+ E V P+ V
Sbjct: 545 EMVEKGVLPDVV 556
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 76/142 (53%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++K + + R+M G +P++VT LIN C G++ A +V
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ ++G P+ ++++T++ G C + ++ +A+ +M+ KG + + +TY LI G C+
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 152 AGETKAALQLLRRIEELAVQPN 173
TK A L + + + P+
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPD 519
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML P + + ++ + ++L +ME KG PN+VT LI+ +C
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
L +I+ F +L ++ +G PN I++ +I G+C G + + +M +G+ ++VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 142 YGVLINGLCKAGETKAAL 159
Y LI G CK G AL
Sbjct: 313 YNTLIKGYCKEGNFHQAL 330
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L ++ V + +M +G + + VT LI +C G + A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P+ IT+T+LI MC G +++AM F D M +G N+ TY L++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A ++LR + + P+ V
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVV 416
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 35 TLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR-INFAFSVLG 93
++F ++ S ++ + +S+ + G P +++ +++ R I+FA +V
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+L+ PN T+ LI+G C G I A+ D M KG N VTY LI+G CK
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ +LLR + ++PN +
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLI 276
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ ML + PP + ++ + + + L +M KG+ P++VT ++LIN
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLI---------------KGMCHNGEISKAMHF 126
R A +L + P+ +T+ TLI KG C G +++A
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+ M+ K + + Y ++I+G C+AG+ + A L + +
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
T+I +EFK + LI FC G + A V ++L + + P+ + +I
Sbjct: 595 TLIENCSNIEFKSVVS-------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
G C G+I KA + +M+ GF + VT L+ L K G+
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 14 KADNTVSS----FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNM 69
+ D TV + FL M P +G ++ L + L +M K P +
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 70 VTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDD 129
VT T LIN C ++ A L + +G PN T+++L+ G+C +G +AM +
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 130 MIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
M+A+G + N VTY LI GLCK + + A++LL R+ ++P+A
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTV-ISLSRQMEFKGITPNMVTSTILINCFC 80
+ +M + PP + ++ +L + + + + +M +G P+ T LI+ C
Sbjct: 144 YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC 203
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
GRI+ A + ++++ P +T+T+LI G+C + + +AM + ++M +KG + N
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY L++GLCK G + A++L + +PN V
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M+ + P + + ++ L + + +M+ KGI PN+ T +
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L++ C GR A + ++ RG PN +T+TTLI G+C +I +A+ D M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + + YG +I+G C + + A L + + PN
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + M P + + ++ L K + L M +G PNMVT T L
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I C +I A +L + +G P+ + +I G C + +A +F D+MI G
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Query: 136 QFNQVTYGV-------LINGLCKAGETKA 157
N++T+ + ++ GLC ++A
Sbjct: 364 TPNRLTWNIHVKTSNEVVRGLCANYPSRA 392
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN-GEISKAMHFHDDMIAKGFQFNQVTY 142
++N AF N+ + G P + LIK +C N G + + +M +G + TY
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTY 195
Query: 143 GVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G LI+GLC+ G A +L + E P V
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 89.4 bits (220), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 80/160 (50%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D+TV F M M P + + ++ K + R+M+ G+ PN+V+ +
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L++ FC G + A ++ + G PN T+T+LI C G +S A ++M+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G ++N VTY LI+GLC A K A +L +++ V PN
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Score = 73.9 bits (180), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 65/144 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ K + +M+ P+++T LINCFC G++
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G PN ++++TL+ C G + +A+ F+ DM G N+ TY LI+ CK
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A +L + ++ V+ N V
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVV 438
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 73/160 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ F M+ P + + ++ + K+ L +M+F+G+ P+ VT
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+I+ F +GR++ + P+ IT+ LI C G++ + F+ +M
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + N V+Y L++ CK G + A++ + + + PN
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + K+ I M G+ PN T T LI+ C +G ++ AF +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G N +T+T LI G+C + +A M G N +Y LI+G K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 152 AGETKAALQLLRRIEELAVQPN 173
A AL+LL ++ ++P+
Sbjct: 485 AKNMDRALELLNELKGRGIKPD 506
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 63/136 (46%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L AK V + M G P + T I+I+C C G + A + + RG
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P+T+T+ ++I G G + + F ++M + + +TY LIN CK G+ L
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 160 QLLRRIEELAVQPNAV 175
+ R ++ ++PN V
Sbjct: 353 EFYREMKGNGLKPNVV 368
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K + + L +++ +GI P+++ I C L +I A V
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + + G N++ +TTL+ +G ++ +H D+M + VT+ VLI+GLCK
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 152 AGETKAALQLLRRIE-ELAVQPNA 174
A+ RI + +Q NA
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANA 613
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ G+ PN+ + LI+ F ++ A +L + RG P+ + + T I G+C
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I A ++M G + N + Y L++ K+G L LL ++EL ++ V
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L +M G+ N+VT T LI+ C R+ A + G + G PN ++ LI G
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +A+ +++ +G + + + YG I GLC + +AA ++ ++E ++ N++
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + L+G + L + +M+ GI N + T L++ + G +
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK-GFQFNQVTYGVLINGLC 150
L + + +TF LI G+C N +SKA+ + + + G Q N + +I+GLC
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 151 KAGETKAALQLLRRIEELAVQPN 173
K + +AA L ++ + + P+
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPD 647
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
LG L + CF S+ F+ + P + L++ F LG+ + +++ G
Sbjct: 205 LGMLEEAIQCF-----SKMKRFR-VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 258
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
P T+ +I MC G++ A ++M +G + VTY +I+G K G +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 161 LLRRIEELAVQPNAV 175
++++ +P+ +
Sbjct: 319 FFEEMKDMCCEPDVI 333
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 89.0 bits (219), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 66/117 (56%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R+M KGI P++ + +LIN F LG + A S+ +++ G PN I + L+ G C +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
GEI KA D+M KG N VTY +I+G CK+G+ A +L ++ + P++
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 75/149 (50%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D+ F M P + +G ++ +K + S+ +M +G+TPN++
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+L+ FC G I A +L + +G HPN +T+ T+I G C +G++++A D+M K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLL 162
G + Y L++G C+ + + A+ +
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P L ++ KK S R M +GI + T T+L+N +++ A +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G P+ ++ LI G G + KA D+M+ +G N + Y +L+ G C+
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+GE + A +LL + + PNAV
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAV 698
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D S + M+ P +G + + + + ++M G+ PN V T
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LIN +C G++ A S +++ +G + T+T L+ G+ N ++ A +M K
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + +YGVLING K G + A + + E + PN +
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+G ++ + ++ ++M G PN+V T LI F R A VL +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
++G P+ + +LI G+ + +A F +M+ G + N TYG I+G +A E
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 157 AALQLLRRIEELAVQPNAV 175
+A + ++ + E V PN V
Sbjct: 540 SADKYVKEMRECGVLPNKV 558
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 38/194 (19%)
Query: 20 SSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
S F M+ P + ++ +LG + L +M KG+ PN VT +I+ +
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH------------ 127
C G + AF + + +G P++ +TTL+ G C ++ +A+
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 128 --DDMIAKGFQF------------------------NQVTYGVLINGLCKAGETKAALQL 161
+ +I F+F N VTY ++I+ LCK G +AA +L
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 162 LRRIEELAVQPNAV 175
+++ + P +
Sbjct: 828 FHQMQNANLMPTVI 841
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ + I + T ++ C G ++ A++++ ++ G PN + +TTLIK N
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
AM +M +G + Y LI GL KA A L + E ++PNA
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 44 LAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPN 103
L K+ + L QM+ + P ++T T L+N + +GR F V + G P+
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 104 TITFTTLIKGMCHNGEISKAMHFHDDMIAK-----GFQFNQVTYGVLINGLCKAGETKAA 158
I ++ +I G +KA+ D M AK G + + T L++G K GE + A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 159 LQLLRRIEELAVQPNA 174
+++ + L P++
Sbjct: 935 EKVMENMVRLQYIPDS 950
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN VT I+I+ C G + A + + P IT+T+L+ G G ++
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
D+ IA G + + + Y V+IN K G T AL L+ ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P LI +C + + +L + KR + T+ T++KGMC +G++ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +MIA G + N V Y LI + A+++L+ ++E + P+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 60/142 (42%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ L+K S +M G+ PN T I+ + A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + + G PN + T LI C G++ +A + M+ +G + TY VL+NGL K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ A ++ R + + P+
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPD 626
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
HK V F ML PP + FG ++ + N + +SL R M G PN V
Sbjct: 198 HKVAANV--FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
LI+ R+N A +L + G P+ TF +I G+C I++A + M+
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+GF + +TYG L+NGLCK G AA L RI
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Score = 83.2 bits (204), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 73/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K+ + + M KG PN+ + TIL++ FC LG+I+ A++V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G PNT+ F LI C I +A+ +M KG + + T+ LI+GLC+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
E K AL LLR + V N V
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTV 530
Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 68/120 (56%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L +M F+G + +T LI C G ++ A S+ +L+ G+ P+ I+ LI G+C
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+G + +A+ F +M+ +G + VT+ LINGLC+AG + L + R+++ + P+ V
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Score = 79.7 bits (195), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
H+ V F M P + F ++ L + + + L R M +G+ N VT
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
LIN F G I A ++ ++ +G + IT+ +LIKG+C GE+ KA + M+
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + ++ +LINGLC++G + A++ + + P+ V
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 69/134 (51%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F ++ + K++ + + R+M KG P++ T LI+ C + I A +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +++ G NT+T+ TLI GEI +A ++M+ +G +++TY LI GLC+
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 152 AGETKAALQLLRRI 165
AGE A L ++
Sbjct: 577 AGEVDKARSLFEKM 590
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 44 LAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPN 103
L K + + V++ +M G+ PN V LI+ FC RI A + + ++G P+
Sbjct: 437 LGKIDEAYNVLN---EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 104 TITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
TF +LI G+C EI A+ DMI++G N VTY LIN + GE K A +L+
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 164 RI 165
+
Sbjct: 554 EM 555
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 30 PPPPITLFGEILGSLAKKNHCFTVIS-LSRQMEFKGITPNMVTSTILINCFCHLGRINFA 88
P P I +F ++ + LS + GI P++ T LI + G + A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 89 FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
VL ++ +G PN ++T L+ G C G+I +A + ++M A G + N V + LI+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 149 LCKAGETKAALQLLRRIEELAVQPN 173
CK A+++ R + +P+
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPD 493
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 60/136 (44%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D S F ML P ++ L + + ++M +G TP++VT
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LIN C GRI ++ + G P+T+TF TL+ +C G + A D+ I
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 134 GFQFNQVTYGVLINGL 149
GF N T+ +L+ +
Sbjct: 699 GFVPNHRTWSILLQSI 714
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 64/149 (42%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + ++ L + SL +M G P+ ++ ILIN C G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A ++ RG P+ +TF +LI G+C G I + + A+G + VT+
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
L++ LCK G A LL E PN
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P IT +G ++ L K + ++ + ++ P +V LI+ F GR++ A +
Sbjct: 320 PDDIT-YGYLMNGLCKIGR----VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 91 VLGNILKR-GYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
VL +++ G P+ T+ +LI G G + A+ DM KG + N +Y +L++G
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
CK G+ A +L + ++PN V
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTV 460
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ D+ +S M P ++ ++ SL+K N + L +M G P+ T
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+I C RIN A ++ +L RG+ P+ IT+ L+ G+C G + A D+
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFY 346
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ + V + LI+G G A +L
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 70 VTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDD 129
V IL++ CH A +V ++L R P TF ++K C EI A+ D
Sbjct: 187 VVLEILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 130 MIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
M G N V Y LI+ L K ALQLL + + P+A
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSL-AKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
+ +S+F ML N P IL L + + + L + G+ PN + +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
L+ FC ++ A+ + G +L+R P+ ++ LI+G C G+++ AM DDM+ KG
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
F ++++Y L+N LC+ + + A +LL R++ P+ V
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML+ P + +L SL +K L +M+ KG P++V +I FC R
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
A VL ++L G PN++++ TLI G+C G + + ++MI+KGF +
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 145 LINGLCKAGETKAALQLL 162
L+ G C G+ + A ++
Sbjct: 371 LVKGFCSFGKVEEACDVV 388
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML + P + + ++ +K + L M KG P+ ++ T L+N C
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR 272
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
++ A+ +L + +G +P+ + + T+I G C A DDM++ G N V+
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 142 YGVLINGLCKAG 153
Y LI GLC G
Sbjct: 333 YRTLIGGLCDQG 344
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M + + P++ + ILI FC G++N A +L ++L +G+ P+ +++TTL+ +C
Sbjct: 215 KMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ +A M KG + V Y +I G C+ A ++L + PN+V
Sbjct: 275 QLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV 331
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 87.0 bits (214), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 78/144 (54%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K + +M +G++ N+VT LI C ++N A V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G +PN IT+ TLI G C G++ KA+ D+ ++G + VTY +L++G C+
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+T A ++++ +EE ++P+ V
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKV 409
Score = 83.6 bits (205), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 76/140 (54%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + ++G L ++ + QM+ GI PN++T LI+ FC +G++ A S+
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++ RG P+ +T+ L+ G C G+ S A +M +G + ++VTY +LI+ ++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 154 ETKAALQLLRRIEELAVQPN 173
+ A+QL +EEL + P+
Sbjct: 423 NMEKAIQLRLSMEELGLVPD 442
Score = 80.1 bits (196), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 74/142 (52%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ +K + ++ME +GI P+ VT TILI+ F + A +
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ + G P+ T++ LI G C G++++A M+ K + N+V Y +I G CK
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G + AL+LL+ +EE + PN
Sbjct: 491 EGSSYRALKLLKEMEEKELAPN 512
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
+ +M+ G+ PN+ T ++N C GR AF V + +RG N +T+ TLI G+C
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++++A D M + G N +TY LI+G C G+ AL L R ++ + P+ V
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 54/100 (54%)
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILI C G I +F +L + + G+ PN + +TTLI G C GEI KA +M
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G N+ TY VLINGL K G K ++ +++E V PN
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+SL R ++ +G++P++VT IL++ FC G + A ++ + +RG P+ +T+T LI
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ + KA+ M G + TY VLI+G C G+ A +L + + E +PN
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 174 AV 175
V
Sbjct: 478 EV 479
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 74/142 (52%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ + A+ ++ I L ME G+ P++ T ++LI+ FC G++N A +
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++++ PN + + T+I G C G +A+ +M K N +Y +I LCK
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 152 AGETKAALQLLRRIEELAVQPN 173
++K A +L+ ++ + + P+
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPS 547
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 53/112 (47%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G +PN+V T LI+ C G I A + + K G N T+T LI G+ NG +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ M G N TY ++N LCK G TK A Q+ + E V N V
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ KK L +M G+ N T T+LIN G F +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G PN T+ ++ +C +G A D+M +G N VTY LI GLC+
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ A +++ +++ + PN +
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLI 339
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 66/169 (39%), Gaps = 15/169 (8%)
Query: 13 HKADNTVSSFLHML--HMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMV 70
H T SS LH L L+ I+ S + IS +M G P
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGS- 129
Query: 71 TSTILINCFCHL-----GRINF-AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
NCF +L G +F + N K + +F LIKG C GEI K+
Sbjct: 130 ------NCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ GF N V Y LI+G CK GE + A L + +L + N
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K N + +M K +P+ VT I+I C G+++ A V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +L P IT+T LI+ G + +A+ D+M+++G + + TY +I G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A +++R +E +P+ +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVI 299
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D + +L N P + + ++ + + + L +M +G+ P+M T
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+I C G ++ AF ++ N+ +G P+ I++ L++ + + G+ + M ++
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
N VTY +LI LC+ G+ + A+ LL+ ++E + P+A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
KAD + F + + P + + + +L + + +M GI P+ +T
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+I+C C G ++ AF +L ++ +HP+ +T+ ++ G C I A++ + M+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQL---LRRIEELA 169
G + N+ TY VLI G+ AG A++L L RI+ ++
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + +L +L + L +M + PN+VT +ILI C G+I A ++
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + ++G P+ ++ LI C G + A+ F + MI+ G + V Y ++ LCK
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
G+ AL++ ++ E+ PN+
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNS 438
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ D+ M + P + ++GSL + + + Q+ P ++T
Sbjct: 172 NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITY 231
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
TILI G ++ A ++ +L RG P+ T+ T+I+GMC G + +A ++
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KG + + ++Y +L+ L G+ + +L+ ++ PN V
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + ML P + + I+ + K+ + R +E KG P++++ IL
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ + G+ ++ + PN +T++ LI +C +G+I +AM+ M KG
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +Y LI C+ G A++ L + P+ V
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ +L + ++L + M+ KG+TP+ + LI FC GR++ A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ G P+ + + T++ +C NG+ +A+ + G N +Y + + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+G+ AL ++ + + P+ +
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEI 474
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
KG P+++ T LI F L I A V+ IL++ P+ + LI G C I
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDD 176
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A D M +K F + VTY ++I LC G+ AL++L ++ QP +
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 64/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + +L +L K + + ++ G +PN + + + G A +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++ G P+ IT+ ++I +C G + +A DM + F + VTY +++ G CK
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 152 AGETKAALQLLRRIEELAVQPN 173
A + A+ +L + +PN
Sbjct: 521 AHRIEDAINVLESMVGNGCRPN 542
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 78/151 (51%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML + P + + ++ + + + + L +M +G TP++VT +L+N C GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A L ++ G PN IT +++ MC G A DM+ KGF + VT+ +
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LIN LC+ G A+ +L ++ + QPN++
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K +S+ +M ++P++VT ++ C G++ A V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +L+R +P+ IT+T LI+ C + + AM D+M +G + VTY VL+NG+CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A++ L + QPN +
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVI 310
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ +L K+ I +M +G P++VT ++ C G++ A +L +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+G P IT+ T+I G+ G+ KA+ D+M AK + + +TY L+ GL + G+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 157 AALQLLRRIEELAVQPNAV 175
A++ E + ++PNAV
Sbjct: 502 EAIKFFHEFERMGIRPNAV 520
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 79/151 (52%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P + F ++ L +K I + +M G PN ++ L++ FC +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A L ++ RG +P+ +T+ T++ +C +G++ A+ + + +KG +TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I+GL KAG+T A++LL + ++P+ +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 70/144 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + K+ I M G PN++T I++ C GR A +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++L++G+ P+ +TF LI +C G + +A+ + M G Q N ++Y L++G CK
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ A++ L R+ P+ V
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIV 415
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + IL S+ L M KG +P++VT ILIN C G + A +
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + G PN++++ L+ G C ++ +A+ + + M+++G + VTY ++ LCK
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 152 AGETKAALQLLRRIEELAVQP 172
G+ + A+++L ++ P
Sbjct: 427 DGKVEDAVEILNQLSSKGCSP 447
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 28 MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINF 87
M+ P + + IL SL + + +M + P+++T TILI C +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 88 AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
A +L + RG P+ +T+ L+ G+C G + +A+ F +DM + G Q N +T+ +++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 148 GLCKAGETKAALQLLRRIEELAVQPNAV 175
+C G A +LL + P+ V
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 76/160 (47%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D + M+ P I + +L +L K + + Q+ KG +P ++T
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+I+ G+ A +L + + P+TIT+++L+ G+ G++ +A+ F +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + N VT+ ++ GLCK+ +T A+ L + +PN
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ LAK I L +M K + P+ +T + L+ G+++ A
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G PN +TF +++ G+C + + +A+ F MI +G + N+ +Y +LI GL
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 152 AGETKAALQLLRRI 165
G K AL+LL +
Sbjct: 567 EGMAKEALELLNEL 580
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M + G P+++ T LI FC LG+ A +L + G P+ IT+ +I G C GE
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
I+ A+ D M + VTY ++ LC +G+ K A+++L R+ + P+ +
Sbjct: 188 INNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 83 GRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTY 142
G + F L N++ G P+ I TTLI+G C G+ KA + + G + +TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 143 GVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
V+I+G CKAGE AL +L R ++V P+ V
Sbjct: 176 NVMISGYCKAGEINNALSVLDR---MSVSPDVV 205
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++G L+++ I + E GI PN VT ++ C + + A
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
L ++ RG PN ++T LI+G+ + G +A+ +++ KG
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M KG+ P++V L+N FC G + A +++ +++RG P+ IT+TTLI G C
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ A+ +M G + ++V + L+ G+CK G A + LR + ++P+ V
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 77/144 (53%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ +L K+N L +M +G+ PN V T LI+ G I+
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L +G P+ + + TL+ G C NG++ A + D MI +G + +++TY LI+G C+
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ + AL++ + +++ ++ + V
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRV 451
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ K + L QME P++ T + LIN C +++ A +
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ KRG PN + FTTLI G NGEI + M++KG Q + V Y L+NG CK
Sbjct: 333 FDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ AA ++ + ++P+ +
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKI 416
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 20 SSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
S+ ML P I L+ ++ K ++ M +G+ P+ +T T LI+ F
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
C G + A + + + G + + F+ L+ GMC G + A +M+ G + +
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
VTY ++++ CK G+ + +LL+ ++ P+ V
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P IT + ++ + T + + ++M+ GI + V + L+ C GR+ A
Sbjct: 413 PDKIT-YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
L +L+ G P+ +T+T ++ C G+ +M + G + VTY VL+NGLC
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
K G+ K A LL + + V P+ +
Sbjct: 532 KLGQMKNADMLLDAMLNIGVVPDDI 556
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 61/143 (42%)
Query: 33 PITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVL 92
PI G +L + K N T+ ++ G N+ IL+N FC G I+ A V
Sbjct: 204 PIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVF 263
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
I KR P ++F TLI G C G + + M + + TY LIN LCK
Sbjct: 264 DEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE 323
Query: 153 GETKAALQLLRRIEELAVQPNAV 175
+ A L + + + PN V
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDV 346
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
F ++ + K+ R+M GI P+ VT T++++ FC G F +L +
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
G+ P+ +T+ L+ G+C G++ A D M+ G + +TY L+ G
Sbjct: 513 SDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
ML P + ++ + KK T L ++M+ G P++VT +L+N C LG
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
++ A +L +L G P+ IT+ TL++G + SK ++ G + +Y
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYK 591
Query: 144 VLINGLCKAGE 154
++N L +A +
Sbjct: 592 SIVNELDRASK 602
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
+ + L M G+ PN+VT LI+ FC ++ A V G + PNT+T+ TLI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G G+ A F++DM+ G Q + +TY LI GLCK +T+ A Q ++ +++ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 172 PNA 174
PN+
Sbjct: 411 PNS 413
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K N +F+ M P + + SL + + R+M I+PN T
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
++++ +C G+++ +L ++ + G+ +++ TLI G C G +S A+ + M
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G Q N VT+ LI+G C+A + + A ++ ++ + V PN V
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 58/144 (40%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M +N P + ++ +++ M GI +++T LI C
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A + + K PN+ TF+ LI G C + + MI G N+ T
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 142 YGVLINGLCKAGETKAALQLLRRI 165
+ +L++ C+ + A Q+LR +
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREM 474
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ + PN VT LIN + G AF +++ G + +T+ LI G+C
Sbjct: 333 EMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ KA F ++ + N T+ LI G C +L + + PN
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + ++ L K+ ++++ + + PN T + LI C + F +
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++++ G HPN TF L+ C N + A +M+ + + T + NGL G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 154 ETKAALQLLRRIE 166
+ + +LL+ +E
Sbjct: 498 KDQLVKKLLQEME 510
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
+ + L M G+ PN+VT LI+ FC ++ A V G + PNT+T+ TLI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G G+ A F++DM+ G Q + +TY LI GLCK +T+ A Q ++ +++ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 172 PNA 174
PN+
Sbjct: 411 PNS 413
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K N +F+ M P + + SL + + R+M I+PN T
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
++++ +C G+++ +L ++ + G+ +++ TLI G C G +S A+ + M
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G Q N VT+ LI+G C+A + + A ++ ++ + V PN V
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 58/144 (40%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M +N P + ++ +++ M GI +++T LI C
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A + + K PN+ TF+ LI G C + + MI G N+ T
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 142 YGVLINGLCKAGETKAALQLLRRI 165
+ +L++ C+ + A Q+LR +
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREM 474
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ + PN VT LIN + G AF +++ G + +T+ LI G+C
Sbjct: 333 EMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ KA F ++ + N T+ LI G C +L + + PN
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPN 447
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + ++ L K+ ++++ + + PN T + LI C + F +
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++++ G HPN TF L+ C N + A +M+ + + T + NGL G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 154 ETKAALQLLRRIE 166
+ + +LL+ +E
Sbjct: 498 KDQLVKKLLQEME 510
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P P+ ++ ++ L KK V L M KG PN VT LI+ C G+++ A S
Sbjct: 255 PSPV-IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+L ++ PN +T+ TLI G+ + A+ M +G+ NQ Y VLI+GL
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
K G+ + A+ L R++ E +PN V
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIV 398
Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 74/140 (52%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
++ ++ L K+ +SL R+M KG PN+V ++L++ C G+ N A +L +
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
+ G PN T+++L+KG G +A+ +M G N+ Y VLI+GLC G
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 156 KAALQLLRRIEELAVQPNAV 175
K A+ + ++ + ++P+ V
Sbjct: 484 KEAMMVWSKMLTIGIKPDTV 503
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 76/158 (48%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + F M P + ++ L K+ + L +M+ +G +P+ V +L
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ C G + ++ N+ +G PN +T+ TLI G+C G++ KA+ + M++
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
N VTYG LINGL K A++LL +EE N
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 72/150 (48%)
Query: 26 LHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRI 85
++MN P F ++ +L K I + R M + P+ T L++ C RI
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 86 NFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVL 145
+ A +L + G P+ + + LI G+C G++++ D+M KG N+VTY L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 146 INGLCKAGETKAALQLLRRIEELAVQPNAV 175
I+GLC G+ A+ LL R+ PN V
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 67/143 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ L K +SL +M PN VT LIN R A +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ +RGYH N ++ LI G+ G+ +AM M KG + N V Y VL++GLC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
G+ A ++L R+ PNA
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNA 432
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ K C + + ++M+ G + N ++LI+ C +GR+ A V
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK---GFQFNQVTYGVLING 148
+L G P+T+ ++++IKG+C G + A+ + +M+ + Q + VTY +L++G
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 149 LCKAGETKAALQLLRRIEELAVQPNAV 175
LC + A+ LL + + P+ +
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVI 576
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D VS M+ P +G ++ L K+ + L ME +G N +
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+LI+ G+ A S+ + ++G PN + ++ L+ G+C G+ ++A + MIA
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G N TY L+ G K G + A+Q+ + +++ N
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
IT G I G L K + L +M GI P++VT + LIN FC +GR A ++
Sbjct: 444 ITYTGMIDG-LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 502
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
I + G PN I ++TLI C G + +A+ ++ MI +G + T+ VL+ LCKAG
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ A + +R + + PN V
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTV 584
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ILGS+ K +V S ++M + I P++ T ILIN C G + +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + K GY P +T+ T++ C G A+ D M +KG + TY +LI+ LC+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ LLR + + + PN V
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEV 339
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 20 SSFL--HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
SS+L M P I + +L KK I L M+ KG+ ++ T +LI+
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF 137
C RI + +L ++ KR HPN +T+ TLI G + G++ A ++M++ G
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 371
Query: 138 NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N VT+ LI+G G K AL++ +E + P+ V
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
ME KG+TP+ V+ +L++ C + A + + G IT+T +I G+C NG
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +A+ ++M G + VTY LING CK G K A +++ RI + + PN +
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 16 DNTVSSFL-HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
D +V SFL ML P + F ++ L + L ++ME G P +VT
Sbjct: 214 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
+++ +C GR A +L ++ +G + T+ LI +C + I+K DM +
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N+VTY LING G+ A QLL + + PN V
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM + + ++ L + N L R M + I PN VT LIN F + G
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
++ A +L +L G PN +TF LI G G +A+ M AKG ++V+YG
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 144 VLINGLCKAGETKAALQLLRRIEELAV 170
VL++GLCK E A R++ V
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGV 439
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
F ++ SL K R M GI PN V+ LIN + + G AFSV +
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K G+HP T+ +L+KG+C G + +A F + A + V Y L+ +CK+G
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 157 AALQLLRRIEELAVQPNA 174
A+ L + + ++ P++
Sbjct: 671 KAVSLFGEMVQRSILPDS 688
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 20 SSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
S F M + P +G +L L K H + + + V L+
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF-N 138
C G + A S+ G +++R P++ T+T+LI G+C G+ A+ F + A+G N
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+V Y ++G+ KAG+ KA + +++ L P+ V
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
I + M +G T + T +L+ C G++ A + + G PNT++F LI G
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++GE KA D+M G TYG L+ GLCK G + A + L+ + + +
Sbjct: 593 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVD 652
Query: 174 AV 175
V
Sbjct: 653 TV 654
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R M G P++ T ++ G +S L +LKR P+ TF LI +C
Sbjct: 187 RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAE 246
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G K+ + M G+ VTY +++ CK G KAA++LL ++ V +
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 302
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
T + +M I P V + ++ G+ + A +L +LK P +FTTL+
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
C NG + +A+ M G + + V+Y VLI GLC G+ A +L ++
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1071
Query: 172 PNA 174
NA
Sbjct: 1072 ANA 1074
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Query: 22 FLHMLHMNPPPPIT-LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
FL LH P T ++ +L ++ K + +SL +M + I P+ T T LI+ C
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 81 HLGRINFAFSVLGNILKRG-YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
G+ A RG PN + +T + GM G+ ++F + M G +
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
VT +I+G + G+ + LL + PN
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 793
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + T M + N P +T + +L +K+ T L R + GI P+ +T
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+ C + +L + RG + TF LI C NGEI+ A M +
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G ++ T +++ L + + + +L + + + P +
Sbjct: 894 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
PP ++ +LAK L R M + P + + T L++ C G + A +
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+ G + +++ LI G+C G+++ A +++M GF N TY LI GL
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM+ P I F ++ + K+ + ++M I P +T +I+ FC
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R++ A +L ++ +G P+ +TF+TLI G C + M +M +G N VTY
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+G C+ G+ AA LL + V P+ +
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 221
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ ML + P + ++ K++ + M KG +P++VT + LIN +C
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
R++ + + +RG NT+T+TTLI G C G++ A ++MI+ G + +T
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 142 YGVLINGLCKAGETKAALQLLRRIEE 167
+ ++ GLC E + A +L +++
Sbjct: 223 FHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I+ L K + +L +M KGI PN++T +I+ FCH GR + A +L +++++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+P+ +TF+ LI ++S+A + +M+ +TY +I+G CK A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 160 QLLRRIEELAVQPNAV 175
++L + P+ V
Sbjct: 136 RMLDSMASKGCSPDVV 151
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ S L R M K I P++VT + LIN F +++ A +
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ P TIT+ ++I G C + A D M +KG + VT+ LING CK
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A +++ + + N V
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTV 186
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
I ++V ST +++ C G A ++ + ++G PN +T+ +I CH+G S A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
MI K + VT+ LIN K + A ++ + + ++ P +
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTI 116
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.3 bits (207), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L QM KG P+ T T+LI C G I+ AF++ ++ RG PN T+T LI G+C
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+G+I +A M+ + +TY LING CK G A +LL +E+ A +PN
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Score = 83.2 bits (204), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN V+ +ILI+ C +GR+ AF + + ++G P+T T+T LIK +C G I KA +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
D+MI +G + N TY VLI+GLC+ G+ + A + R++ + + P+ +
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Score = 83.2 bits (204), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + F M+ P + + ++ L + + R+M I P+++T L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
IN +C GR+ AF +L + KR PN TF L++G+C G+ KA+H M+ G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ V+Y VLI+GLC+ G A +LL + ++P+ +
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 76/139 (54%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F E++ L + + + L ++M G++P++V+ +LI+ C G +N A+ +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ P+ +TFT +I C G+ A F M+ KG ++VT LI+G+CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 152 AGETKAALQLLRRIEELAV 170
G+T+ AL +L + ++ +
Sbjct: 524 VGKTRDALFILETLVKMRI 542
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 74/151 (49%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P I + ++ L ++ H T L M I P+ +T T +IN FC G+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A + LG +L++G + +T TTLI G+C G+ A+ + ++ + V
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+++ L K + K L +L +I +L + P+ V
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 38 GEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILK 97
G+I GS F ++ L M+ G PN+ TI+IN C GR+ A +L +
Sbjct: 595 GDITGS-------FRILEL---MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Query: 98 RGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
G PN +T+T ++KG +NG++ +A+ M+ +G++ N Y L+ G
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ +L + +L +M +G PN+ T T+LI+ C G+I A V
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++K P+ IT+ LI G C +G + A M + + N T+ L+ GLC+
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ A+ LL+R+ + + P+ V
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIV 442
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAF-- 89
P F I+ + K+ + M KGI+ + VT T LI+ C +G+ A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 90 ---------------------------------SVLGNILKRGYHPNTITFTTLIKGMCH 116
++LG I K G P+ +T+TTL+ G+
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 117 NGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+G+I+ + + M G N Y ++INGLC+ G + A +LL +++ V PN V
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ +L SLAK + F R+ME G M+ ++N C G A + IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK-GFQFNQVTYGVLINGLCKAGET 155
K G+ ++ T+L+ G C + A+ D M + N V+Y +LI+GLC+ G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 156 KAALQLLRRIEELAVQPN 173
+ A L ++ E QP+
Sbjct: 283 EEAFGLKDQMGEKGCQPS 300
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++VT T L++ G I +F +L + G PN +T +I G+C G + +A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
M G N VTY V++ G G+ AL+ +R + E + N
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 84.3 bits (207), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 32 PPITLFGEILGSLAKK---NHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFA 88
P + + ++G +K + CF ++ ++ME G PN+V+ LINC C ++ A
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDIL---KEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 89 FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
V ++ RG P + LI G C G+I A F +M+ KG + N VTY LI+G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 149 LCKAGETKAALQLLRRIEELAVQPN 173
L G+ A LL I ++P+
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 80/157 (50%)
Query: 18 TVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
T++ FL++L + P ++G+ + + K + + L +M+ I P++ +LI+
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF 137
C R+N A + +L R P+ IT+ TLI G C G K+ + M A +
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 138 NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ +T+ L+ GL KAG + A +L+ +++L P+A
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 71/141 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +G ++ L K + + R ME +G++P + +LI+ C G+I AF
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+LK+G N +T+ TLI G+ G++S+A ++ KG + + TY LI+G
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 152 AGETKAALQLLRRIEELAVQP 172
AG + + L ++ ++P
Sbjct: 612 AGNVQRCIALYEEMKRSGIKP 632
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ N T +IL+N C G+I A +LG + +G PN + + T+I G C G++ A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ M +G + + + Y LI C+ GE + A + + +++ V P+
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 68/154 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML P + + ++ K + + +M+ I P+++T L+
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G + A +VL + G+ P+ TF+ L G N + A+ ++ + G + N T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+L+N LCK G+ + A ++L R + PN V
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 64/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F +L L K ++ ++M+ G P+ T +IL + + + A V
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G N T + L+ +C G+I KA +AKG N+V Y +I+G C+
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+ A + +E+ ++P+
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPD 423
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ K S++M KGI N+VT LI+ G+++ A +
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L I ++G P+ T+ +LI G G + + + +++M G + TY +LI+ LC
Sbjct: 587 LLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC- 644
Query: 152 AGETKAALQLLRRI-EELAVQPN 173
TK ++L R+ E++++P+
Sbjct: 645 ---TKEGIELTERLFGEMSLKPD 664
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 52/113 (46%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
ME +G+ P+ + LI FC LG + A + + +G P+ T+ LI G E
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
K +M G N V+YG LIN LCK + A + R +E+ V P
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L R+M KG+ PN V +I+ +C G + A + + K+G P+ + + LI+ C
Sbjct: 377 LGREMA-KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
GE+ A + M KG + TY +LI G + E +L+ +E+ PN V
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 68/153 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M H P + ++ ++ L K L +M + + P+++T LI+ +C
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G +F V + P+ ITF TL+KG+ G + A + +M GF + T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ +L +G + +AAL + + V+ NA
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
+P+ + LI G+C ++ A D+M+A+ + +TY LI+G CKAG + + +
Sbjct: 211 YPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 161 LLRRIEELAVQPNAV 175
+ R++ ++P+ +
Sbjct: 271 VRERMKADHIEPSLI 285
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ I+ L K H +L +M KGI P+++T + +I+ FC GR A +L
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++++R +P+ +TF+ LI + G++S+A + DM+ +G +TY +I+G CK
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
A ++L + + P+ V
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVV 217
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + F ++ +L K+ + M +GI P +T +I+ FC R
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N A +L ++ + P+ +TF+TLI G C + M +M +G N VTY
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+G C+ G+ AA LL + V PN +
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ S + L R M + I P++VT + LIN G+++ A +
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G++L+RG P TIT+ ++I G C ++ A D M +K + VT+ LING CK
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A +++ + + N V
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTV 252
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P + ++ K++ + M K +P++VT + LIN +C R
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ + + +RG NT+T+TTLI G C G++ A + MI+ G N +T+
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291
Query: 145 LINGLCKAGETKAALQLLRRIEE 167
++ LC E + A +L +++
Sbjct: 292 MLASLCSKKELRKAFAILEDLQK 314
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
+++ G P+ +TFTTL+ G+C G + +A+ D M+ +G Q YG +INGLCK G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 155 TKAALQLLRRIEELAVQPNAV 175
T++AL LL ++EE ++ + V
Sbjct: 57 TESALNLLSKMEETHIKAHVV 77
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+G I+ L K + ++L +ME I ++V +I+ C G A ++ +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+G P+ IT++ +I C +G + A DMI + + VT+ LIN L K G+
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 157 AALQ----LLRR 164
A + +LRR
Sbjct: 164 EAEEIYGDMLRR 175
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G P++VT T L+N C GR+ A +++ +++ G+ P + T+I G+C G+ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ M + + V Y +I+ LCK G A L + + + P+ +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVI 112
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D +S + M N P + + ++ +L ++L +QM GI P+ T
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYT 299
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+LI FC ++ A +L ++L+ G PN IT+ LIKG C + KAM M+ +
Sbjct: 300 VLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQ 358
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +TY LI G C +G +A +LL +EE + PN
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ +L SLA+ + L +M ++P++ T L+N +C LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ G P+ T+T+ I G C E+ A +M G N+V+Y LI GL +A +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 157 AALQLLRRIEELAVQPNA 174
AL LL ++++ PN
Sbjct: 243 EALSLLVKMKDDNCCPNV 260
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M G N V+ T LI +I+ A S+L + PN T+T LI +C +
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G+ S+AM+ M G + + Y VLI C A LL + E + PN +
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 69/116 (59%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R+M KG+ ++V+ +ILI+ G + A +LG ++K G PN IT+T +I+G+C
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G++ +A + +++ G + ++ Y LI+G+C+ G A +L +E+ +QP+
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ L+K+ + + L +M +G+ PN++T T +I C +G++ AF + IL G
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
+ + TLI G+C G +++A DM +G Q + +TY +INGLC AG A
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I+ L K+ ++L + +G+T N +T LIN C G + A + ++ G
Sbjct: 661 IINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIG 720
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P+ +T+ LI +C G A D M++KG N + Y +++G CK G+T+ A+
Sbjct: 721 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAM 780
Query: 160 QLLRRIEELAVQPNA 174
+++ R V P+A
Sbjct: 781 RVVSRKMMGRVTPDA 795
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + + I+ L K L ++ GI + LI+ C G
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N AFS+LG++ +RG P+ +T+ T+I G+C G +S+A D ++KG + +TY
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYST 417
Query: 145 LINGLCKAGETKAALQLLRRIEELAV 170
L++ K A L++ RR E +
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKI 443
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 61/111 (54%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ PN+VT T L++ C LG+++ ++ + G+ + + ++ I G G + A+
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+M+ KG + V+Y +LI+GL K G + AL LL ++ + V+PN +
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 58/108 (53%)
Query: 68 NMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH 127
+++ TI+IN C G + A ++ RG NTIT+ +LI G+C G + +A+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 128 DDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
D + G ++VTYG+LI+ LCK G A +LL + + PN +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +G ++ +L K+ L M KG+ PN++ +++ +C LG+ A V
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + P+ T +++IKG C G++ +A+ + K + + LI G C
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 152 AGETKAALQLLRRI 165
G + A LLR +
Sbjct: 843 KGRMEEARGLLREM 856
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 59/131 (45%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L ++ + L +E G+ P+ VT ILI+ C G A +L +++
Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMV 752
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+G PN I + +++ G C G+ AM + + T +I G CK G+ +
Sbjct: 753 SKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 157 AALQLLRRIEE 167
AL + ++
Sbjct: 813 EALSVFTEFKD 823
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + +L S K + V+ + R+ I ++V IL+ F +G A ++
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ + P+T T+ T+IKG C G+I +A+ +++ K V Y +I+ LCK G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKG 530
Query: 154 ETKAALQLLRRIEE 167
A ++L + E
Sbjct: 531 MLDTATEVLIELWE 544
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ + V +FL M + +F ++G+ K N V + ++M+ KG+TPN +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
I++ G + AF V ++K P+ T+T +IK C E+ A M
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRK 439
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KG + T+ VLINGLC+ T+ A LL + E+ ++P+ V
Sbjct: 440 KGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
ME + PN+V L++ C + A V N+ R + P++ T++ L++G
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN 252
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ KA +MI G + VTY ++++ LCKAG AL ++R ++ +P
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R+M G P++VT +I+++ C GR++ A ++ ++ P T ++ L+
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ +A+ +M G + + + LI CKA K ++L+ ++ V PN+
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I ++ +L KKN + + ++ G+ PN+VT T ++ + G + A V
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +L RG++P+ T+T L+ G C G S+A DDM + N+VTYGV+I LCK
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
++ A + + E + P++
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDS 331
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 61/112 (54%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
GITPN+ T +L+ C I A+ VL I G PN +T+TT++ G G++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++M+ +G+ + TY VL++G CK G A ++ +E+ ++PN V
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Score = 76.3 bits (186), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K+ + F ML + P +L +++ +L + + L R+M P+ +
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ C GR+ A + ++G P+ +T+ TLI GMC GE+++A DDM +
Sbjct: 371 TLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N TY VLI GL K G K +++L + E+ PN
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
HK D + ML N P L ++ L K+ L + E KG P+++T
Sbjct: 345 HKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTY 403
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
LI C G + A + ++ +R PN T+ LI+G+ NG + + + ++M+
Sbjct: 404 NTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE 463
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLL 162
G N+ T+ +L GL K G+ + A++++
Sbjct: 464 IGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 70/142 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ILG + + + +M +G P+ T T+L++ +C LGR + A +V
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++ K PN +T+ +I+ +C + +A + D+M+ + F + +I+ LC+
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ A L R++ + P+
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPD 365
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +G ++ +L K+ ++ +M + P+ +I+ C +++ A +
Sbjct: 294 PNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+LK P+ +TLI +C G +++A D+ KG + +TY LI G+C+
Sbjct: 354 WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCE 412
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
GE A +L + E +PNA
Sbjct: 413 KGELTEAGRLWDDMYERKCKPNA 435
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D + F+ M P + + ++ SL ++L ++ME GI PN+ T T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+LI+ C + A +LG +L++G PN IT+ LI G C G I A+ + M ++
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N TY LI G CK+ K A+ +L ++ E V P+ V
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVV 463
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ SL K L +E KG+ PN+V T LI+ +C G+++ A +L +L
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ PN++TF LI G+C +G++ +A + M+ G Q T +LI+ L K G+
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 157 AALQLLRRIEELAVQPNA 174
A +++ +P+A
Sbjct: 620 HAYSRFQQMLSSGTKPDA 637
Score = 73.9 bits (180), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
HKA ++ ML P + + ++ + + + L M +G+ P+ T
Sbjct: 444 HKAMGVLNK---MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T +I+ C R+ A + ++ ++G +PN + +T LI G C G++ +A + M++
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
K N +T+ LI+GLC G+ K A L ++ ++ +QP
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 68/134 (50%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + +L SLA+ + + +M + PN+ T ++N +C LG + A +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
I++ G P+ T+T+LI G C ++ A ++M KG + N+V Y LI+GLC A
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 154 ETKAALQLLRRIEE 167
A+ L ++++
Sbjct: 303 RIDEAMDLFVKMKD 316
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + E++ K N + L++ +E K + P++VT LI+ C G + A+ +
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + RG P+ T+T++I +C + + +A D + KG N V Y LI+G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG+ A +L ++ PN++
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSL 568
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML N P F ++ L L +M G+ P + T TILI+ G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK----GFQFNQV 140
+ A+S +L G P+ T+TT I+ C G + A +DM+AK G +
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA----EDMMAKMRENGVSPDLF 673
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
TY LI G G+T A +L+R+ + +P+
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M KG N V T LI+ C RI+ A + + P T+T LIK +C +
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
S+A++ +M G + N TY VLI+ LC + + A +LL ++ E + PN +
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 18/169 (10%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ S F ML P + + + ++ + +M G++P++ T + L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK------------------GMCHN 117
I + LG+ NFAF VL + G P+ TF +LIK M +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
E + + M+ N +Y LI G+C+ G + A ++ ++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 56/105 (53%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+GI+P+ + L++C C L + N A V+ +++ G+ P + LI G+ GE +
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+++ G+ +++ + ++I+G+ K G +A +L +E+
Sbjct: 850 GTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F + +K V M K +PN+VT + I+ FC G + A
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ + PN +TFT LI G C G++ A+ + +M N VTY LI+G CK
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
GE + A ++ R+ E V+PN++
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSL 269
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 79/157 (50%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
+ SF M P + F ++ K +SL ++M ++ N+VT T LI+
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
FC G + A + +++ PN++ +TT+I G G+ AM F M+ +G + +
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
YGV+I+GLC G+ K A +++ +E+ + P+ V
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 15 ADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
+DN + ML+ IT +G I+ L + ME + P+MV T
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
++N + GR+ A ++ +++RG+ P+ + +T+I G+ NG++ +A+ + I K
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA 401
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
N V Y VLI+ LCK G+ +L +I E + P+
Sbjct: 402 ---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 64/134 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + + + K + M+ ++PN+VT T LI+ +C G + A S+
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + N +T+T LI G C GE+ +A + M+ + N + Y +I+G +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 152 AGETKAALQLLRRI 165
G++ A++ L ++
Sbjct: 281 RGDSDNAMKFLAKM 294
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 57 SRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCH 116
SR +E + + PN + T +I+ F G + A L +L +G + + +I G+C
Sbjct: 257 SRMVEDR-VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 117 NGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
NG++ +A +DM + V + ++N K+G KAA+ + ++ E +P+ V
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 37/150 (24%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G TP+ + +++ C LG++ FA ++ ++ + G P+ I++ +LI G C NG+I
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 123 AMHFHDDMIAK-GF-------QFNQ-----------------------------VTYGVL 145
A + + A GF FN VTY
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTW 169
Query: 146 INGLCKAGETKAALQLLRRIEELAVQPNAV 175
I+ CK+GE + AL+ ++ A+ PN V
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVV 199
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
++ ++ +L K+ V L ++ G+ P+ T I C G + AF + +
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
++ G + + +TTLI G+ G + +A D+M+ G + + +LI K G
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM 524
Query: 156 KAALQLL 162
AA LL
Sbjct: 525 AAASDLL 531
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 44 LAKKNHCFTVIS----LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
LAK H +IS + R M KG++P+++T TIL+ C LG I+ +L ++L RG
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 100 YHPNTIT-FTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
+ N+I + ++ G+C G I +A+ + M A G + V Y ++I+GLCK G+ A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 159 LQLLRRIEELAVQPNA 174
L L + + + PN+
Sbjct: 418 LWLYDEMCDKRILPNS 433
Score = 80.5 bits (197), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++GS+A+ + L+ M G+ P+ VT IL F LG I+ A+ V+ ++L +G
Sbjct: 269 LVGSIAE------ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT-YGVLINGLCKAGETKAA 158
P+ IT+T L+ G C G I + DM+++GF+ N + V+++GLCK G A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 159 LQLLRRIEELAVQPNAV 175
L L +++ + P+ V
Sbjct: 383 LSLFNQMKADGLSPDLV 399
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 71/134 (52%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L L K +SL QM+ G++P++V +I+I+ C LG+ + A + + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
PN+ T L+ G+C G + +A D +I+ G + V Y ++I+G K+G + AL
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 160 QLLRRIEELAVQPN 173
+L + + E + P+
Sbjct: 489 ELFKVVIETGITPS 502
Score = 67.0 bits (162), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 69/139 (49%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L ++ + R E+K I P++V+ +++ +C LG ++ A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K G P+ + LI G+C G I++A+ DM G + + VTY +L G G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 157 AALQLLRRIEELAVQPNAV 175
A +++R + + + P+ +
Sbjct: 310 GAWEVIRDMLDKGLSPDVI 328
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ + ILIN C +G I A + ++ K G P+++T+ L KG G IS A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
DM+ KG + +TY +L+ G C+ G L LL+ + + N++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
LSR E I P +++++ C GRI+ A S+ + G P+ + ++ +I G+C
Sbjct: 354 LSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
G+ A+ +D+M K N T+G L+ GLC+ G A LL
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I L+ ++ AK + L + + GITP++ T LI +C I A +L
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
I G P+ +++TTL+ + G +M A+G VTY V+ GLC+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 154 ETKAALQLLR-RIEELAVQ 171
+ + +LR RI E Q
Sbjct: 588 KHENCNHVLRERIFEKCKQ 606
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 38 GEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILK 97
G +L L +K SL + G T ++V I+I+ + G I A + +++
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 98 RGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKA 157
G P+ TF +LI G C I++A D + G + V+Y L++ G TK+
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 158 ALQLLRRIEELAVQPNAV 175
+L R ++ + P V
Sbjct: 557 IDELRREMKAEGIPPTNV 574
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC---------HL 82
P + + ++ + A + ++ L R+M+ +GI P VT +++ C H+
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 83 GRINFAFSV---LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
R L ++ G P+ IT+ T+I+ +C +S A F + M ++ +
Sbjct: 596 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASS 655
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEELAV 170
TY +LI+ LC G + A + ++E V
Sbjct: 656 ATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Score = 49.7 bits (117), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 30 PPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAF 89
PP IT + I+ L + H M+ + + + T ILI+ C G I A
Sbjct: 617 PPDQIT-YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
S + ++ ++ + +TTLIK C G+ A+ ++ +GF + Y +IN L
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 150 CK 151
C+
Sbjct: 736 CR 737
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 44 LAKKNHCFTVIS----LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
LAK H +IS + R M KG++P+++T TIL+ C LG I+ +L ++L RG
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 100 YHPNTIT-FTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
+ N+I + ++ G+C G I +A+ + M A G + V Y ++I+GLCK G+ A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 159 LQLLRRIEELAVQPNA 174
L L + + + PN+
Sbjct: 418 LWLYDEMCDKRILPNS 433
Score = 80.1 bits (196), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++GS+A+ + L+ M G+ P+ VT IL F LG I+ A+ V+ ++L +G
Sbjct: 269 LVGSIAE------ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT-YGVLINGLCKAGETKAA 158
P+ IT+T L+ G C G I + DM+++GF+ N + V+++GLCK G A
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 159 LQLLRRIEELAVQPNAV 175
L L +++ + P+ V
Sbjct: 383 LSLFNQMKADGLSPDLV 399
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 71/134 (52%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L L K +SL QM+ G++P++V +I+I+ C LG+ + A + + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
PN+ T L+ G+C G + +A D +I+ G + V Y ++I+G K+G + AL
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 160 QLLRRIEELAVQPN 173
+L + + E + P+
Sbjct: 489 ELFKVVIETGITPS 502
Score = 67.0 bits (162), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 69/139 (49%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L ++ + R E+K I P++V+ +++ +C LG ++ A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K G P+ + LI G+C G I++A+ DM G + + VTY +L G G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 157 AALQLLRRIEELAVQPNAV 175
A +++R + + + P+ +
Sbjct: 310 GAWEVIRDMLDKGLSPDVI 328
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ + ILIN C +G I A + ++ K G P+++T+ L KG G IS A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
DM+ KG + +TY +L+ G C+ G L LL+ + + N++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
LSR E I P +++++ C GRI+ A S+ + G P+ + ++ +I G+C
Sbjct: 354 LSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
G+ A+ +D+M K N T+G L+ GLC+ G A LL
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I L+ ++ AK + L + + GITP++ T LI +C I A +L
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
I G P+ +++TTL+ + G +M A+G VTY V+ GLC+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 154 ETKAALQLLR-RIEELAVQ 171
+ + +LR RI E Q
Sbjct: 588 KHENCNHVLRERIFEKCKQ 606
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 38 GEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILK 97
G +L L +K SL + G T ++V I+I+ + G I A + +++
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 98 RGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKA 157
G P+ TF +LI G C I++A D + G + V+Y L++ G TK+
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 158 ALQLLRRIEELAVQPNAV 175
+L R ++ + P V
Sbjct: 557 IDELRREMKAEGIPPTNV 574
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC---------HL 82
P + + ++ + A + ++ L R+M+ +GI P VT +++ C H+
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 83 GRINFAFSV---LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
R L ++ G P+ IT+ T+I+ +C +S A F + M ++ +
Sbjct: 596 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASS 655
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEELAV 170
TY +LI+ LC G + A + ++E V
Sbjct: 656 ATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Score = 49.7 bits (117), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 30 PPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAF 89
PP IT + I+ L + H M+ + + + T ILI+ C G I A
Sbjct: 617 PPDQIT-YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKAD 675
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
S + ++ ++ + +TTLIK C G+ A+ ++ +GF + Y +IN L
Sbjct: 676 SFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 150 CK 151
C+
Sbjct: 736 CR 737
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + V F M P + F ++ L +M +G+ P ++T +
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL+ RI A+ VL + K+G+ PN I + LI G ++KA+ D M++K
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G TY LI G CK G+ A +LL+ + + N
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 42 GSLAKKNHC-FTVISLSRQMEF-----------KGITPNMVTSTILINCFCHLGRINFAF 89
G K C + SL R EF KG++P++ T IN FC G++ A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+ + + G PN +TF T+I G+ G +A F + M+ +G + +TY +L+ GL
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
+A A +L+ + + PN +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVI 366
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 69/154 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ N P ++ ++ + + + L M+ KGI+PN T T LI
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ R+ A + + G PN +T LI G G++ K +M +K N++T
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y V+I G + G A +LL + E + P+++
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 66/137 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML N P L ++ L K + L Q KG + TS L++ C G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ AF + IL RG + +++ TLI G C ++ +A F D+M+ +G + + TY +
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 145 LINGLCKAGETKAALQL 161
LI GL + + A+Q
Sbjct: 581 LICGLFNMNKVEEAIQF 597
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M +G+ P+ T +ILI ++ ++ A + + G P+ T++ +I G C
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ F D+M++K Q N V Y LI C++G AL+L ++ + PN+
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ T +++I+ C R ++ + PNT+ + LI+ C +G +S A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +DM KG N TY LI G+ + A L + ++PN
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + + ++ L + + ++M KG PN++ LI+ F G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N A + ++ +G + T+ TLIKG C NG+ A +M++ GF NQ ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 145 LINGLCKAGETKAALQLL 162
+I LC +AL+ +
Sbjct: 441 VICLLCSHLMFDSALRFV 458
Score = 57.0 bits (136), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L +M +G+ PN+ T LI+ + LG++ +L + + HPN IT+T +I G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
+G +++A ++M KG + +TY I G K G A +
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L ++M G N + T +I C + A +G +L R P TTLI G+C
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+G+ SKA+ + KGF + T L++GLC+AG+ A ++ + I
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 57/115 (49%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M + ++P T LI+ C G+ + A + L +G+ +T T L+ G+C G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ +A +++ +G ++V+Y LI+G C + A L + + ++P+
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + V F M P + F ++ L +M +G+ P ++T +
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL+ RI A+ VL + K+G+ PN I + LI G ++KA+ D M++K
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G TY LI G CK G+ A +LL+ + + N
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 42 GSLAKKNHC-FTVISLSRQMEF-----------KGITPNMVTSTILINCFCHLGRINFAF 89
G K C + SL R EF KG++P++ T IN FC G++ A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+ + + G PN +TF T+I G+ G +A F + M+ +G + +TY +L+ GL
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
+A A +L+ + + PN +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVI 366
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 69/154 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ N P ++ ++ + + + L M+ KGI+PN T T LI
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ R+ A + + G PN +T LI G G++ K +M +K N++T
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y V+I G + G A +LL + E + P+++
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 66/137 (48%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML N P L ++ L K + L Q KG + TS L++ C G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ AF + IL RG + +++ TLI G C ++ +A F D+M+ +G + + TY +
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 145 LINGLCKAGETKAALQL 161
LI GL + + A+Q
Sbjct: 581 LICGLFNMNKVEEAIQF 597
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M +G+ P+ T +ILI ++ ++ A + + G P+ T++ +I G C
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ F D+M++K Q N V Y LI C++G AL+L ++ + PN+
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ T +++I+ C R ++ + PNT+ + LI+ C +G +S A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +DM KG N TY LI G+ + A L + ++PN
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P + + ++ L + + ++M KG PN++ LI+ F G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+N A + ++ +G + T+ TLIKG C NG+ A +M++ GF NQ ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 145 LINGLCKAGETKAALQLL 162
+I LC +AL+ +
Sbjct: 441 VICLLCSHLMFDSALRFV 458
Score = 57.0 bits (136), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L +M +G+ PN+ T LI+ + LG++ +L + + HPN IT+T +I G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
+G +++A ++M KG + +TY I G K G A +
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L ++M G N + T +I C + A +G +L R P TTLI G+C
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+G+ SKA+ + KGF + T L++GLC+AG+ A ++ + I
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 57/115 (49%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M + ++P T LI+ C G+ + A + L +G+ +T T L+ G+C G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ +A +++ +G ++V+Y LI+G C + A L + + ++P+
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G P+ T T+++ C G +N A ++ G+ PN I FT+LI G+C G I +
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL-LRRIEELAVQPN 173
A ++M+ G++ N T+ LI+GLCK G T+ A +L L+ + +PN
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
+ + F M+ + P + F ++ L KK + +M G PN+ T T L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 76 INCFCHLGRINFAFSVLGNILKRG-YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
I+ C G AF + +++ Y PN T+T++I G C ++++A M +G
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
N TY LING CKAG A +L+ + + PN
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 59 QMEFKGITPNMVTSTIL-INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
+M +G+ P+ + ++ I CF G+I A L +++RG+ P+ T T ++ +C N
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCEN 265
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G +++A+ + MI GF+ N + + LI+GLCK G K A ++L + +PN
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
IL +L + I R+M G PN++ T LI+ C G I AF +L +++ G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMI-AKGFQFNQVTYGVLINGLCKAGETKAA 158
+ PN T T LI G+C G KA ++ + ++ N TY +I G CK + A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 159 LQLLRRIEELAVQPN 173
L R++E + PN
Sbjct: 378 EMLFSRMKEQGLFPN 392
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P T T +I+C+C G I+ A N+ + G P++ T+ +LI G+C + +A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
++ MI +G +VT L CK ++ A+ LL +++
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN+ T T +I +C ++N A + + ++G PN T+TTLI G C G +A
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ M +GF N TY I+ LCK A +LL + ++ + V
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 22 FLHMLHMNP-PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
FL ++ + P + + ++G K++ L +M+ +G+ PN+ T T LIN C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
G A+ ++ + G+ PN T+ I +C +A + + G + + V
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
TY +LI CK + AL R+ + + +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 46 KKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTI 105
K+N ++ +M G +M + ILI FC ++ + + ++ G P
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 106 TFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
T+T++I C G+I A+ + +M G + TYG LI+GLCK A +L +
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 166 EELAVQPNAV 175
+ + P V
Sbjct: 595 IDRGLSPPEV 604
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G PN+ T I+ C R A+ +L G + +T+T LI+ C +I++
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
A+ F M GF+ + +LI C+ + K + +L + + L + P
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 46 KKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTI 105
K+ S + ME KGI PN+V ++ C + ++ A S+ +L++G PN
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 106 TFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
T++ LI G N + A + M A F+ N+V Y +INGLCK G+T A ++L+ +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+G ++ KKN T +L ++ G+ PN+ LI+ F +LG+++ A + ++
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
G + T+TT+I G+ +G I+ A + +++ G +++ + VL+NGL K G+
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 157 AALQLLRRIEELAVQPNAV 175
A ++L +++ V PN +
Sbjct: 783 KASKMLEEMKKKDVTPNVL 801
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ V ++ M P + F ++ K N + ++ +M+ + ++ L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ FC + A+++ + + G PN + +LI G + G++ A+ + M+ G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ TY +I+GL K G A L + +L + P+ +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
+I+ F +G + A + + G PN +TFT+LI G C + + A+ +M +
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ + YG LI+G CK + K A L + EL + PN
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFK-GITPNMVT 71
K + V F ++ P LF + + K + L R+M K G+ + T
Sbjct: 253 RKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQET 312
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
T +I F G + A V+ ++ G + I T+L+ G C E+ KA+ + M
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+G ++V + V++ CK E + A++ R++ + + P++V
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSV 416
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILK-RGYHPNTITFTTLIKGMCHN 117
QM N V +IN C +G+ + A +L N++K + Y + ++ ++I G
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G+ A+ + +M G N VT+ LING CK+ AL++ ++ + ++
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 62/132 (46%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P + ++ + K+ + + + +M GI +++ +T L+N +C + A
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ + + G P+ + F+ +++ C N E+ KA+ F+ M + + V +I G
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 151 KAGETKAALQLL 162
KA +AAL++
Sbjct: 427 KAESPEAALEIF 438
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
GI P+ + +L+N G+ A +L + K+ PN + ++T+I G G +++A
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 124 MHFHDDMIAKGFQFNQVTYGVLING 148
HD+M+ KG + + +L++G
Sbjct: 820 FRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
FC G+++ A S L + ++G PN + + ++ C + A +M+ KG + N
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
TY +LI+G K + + A ++ ++ + N V
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 19 VSSFLH-MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
+S LH M+ N P + ++ +I+ L + + ++ KG P+ V T +I
Sbjct: 267 MSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIR 326
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF 137
FC G + A + ++K+G PN + +I G GEIS F+++M+ G+
Sbjct: 327 GFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGG 386
Query: 138 NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ +I G C G++ A ++ + + E V PNA+
Sbjct: 387 TMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 46 KKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTI 105
K+ V + +M G M++ +I FC G+ + AF + N+ + G PN I
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 106 TFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
T+ LIKG C ++ K + + ++ A G + + + Y L+ L + +L L
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G+ P LI+ FC +G VL ++ + P+ + +IKG+C N + +
Sbjct: 242 QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLE 301
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
A ++ KG+ ++V Y +I G C+ G +A +L + + ++PN
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPN 352
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
IL K + C + ++ I + V + + LGR+ AF +L + RG
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P+ I +TTLI G C G++ A+ D+MI G + +TY VL++GL + G + L
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 160 QLLRRIEELAVQPNAV 175
++ R++ +PNAV
Sbjct: 479 EIYERMKAEGPKPNAV 494
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 67/125 (53%)
Query: 43 SLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHP 102
+L+K L ++M+ +GI P+++ T LI+ +C G++ A ++ ++ G P
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 103 NTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ IT+ L+ G+ NG + + ++ M A+G + N VT V+I GLC A + K A
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 163 RRIEE 167
+E+
Sbjct: 517 SSLEQ 521
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++ G+++G+ K N+ L M +G+ P++ T TI+I+ +C L + A S+
Sbjct: 589 PGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESL 648
Query: 92 LGNILKRGYHPNTITFTTLI----------KGMCH-NGEIS--KAMHFHDDMIAKGFQFN 138
++ +RG P+ +T+T L+ C GE+ KA + A G +
Sbjct: 649 FEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLD 708
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
V Y VLI+ CK + A +L R+ + ++P+ V
Sbjct: 709 VVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M + P +I FC L + A + +++RG P+ T+T +I C
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
E+ KA +DM +G + + VTY VL++
Sbjct: 640 NELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 58/103 (56%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M KG+ PN +T ++I +C G+I A + N+ G P++ T+T+LI G C
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
+ +AM +M KG N VTY V+I+GL KAG++ A L
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
ME KG ++ T + +CF L R + A L +++ G +T+++T LI C G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ +A +M +KG Q N +TY V+I CK G+ K A +L +E + P++
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+ + K+ V + + M+ G+ N VT T+L+ G+++ A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +RG + +T+LI C G + +A D++ KG + TYG LI+G+CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
GE AA L+ ++ V V
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQV 400
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M +GI ++ T LI+ C G + AF + + ++G P++ T+ LI G+C G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
E+ A ++M +KG QV + LI+G C+ G A + +E+ Q +
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L R ME G+ + V+ T LI+ +C G + A + + +G PN IT+ +I C
Sbjct: 457 LFRMME-GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G+I +A +M A G + TY LI+G C A A++L + + N+V
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSV 575
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 35/148 (23%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
KG++P+ T LI+ C +G + A ++ + +G + + F TLI G C G + +
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 123 AMHFHDDMIAKGFQ------------FNQ-----------------------VTYGVLIN 147
A +D M KGFQ FN+ V+Y LI+
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 148 GLCKAGETKAALQLLRRIEELAVQPNAV 175
CK G + A +L + VQPNA+
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAI 505
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F+ M P + ++ + K+ L ME G+ P+ T T LI+ C
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
++ A + + +G N++T+T +I G+ G+ +A +D+M KG+ +
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 142 YGVLINGL 149
Y LI +
Sbjct: 612 YTALIGSM 619
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 67/133 (50%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + ++ K N + +ME G++ N VT LI+ C R+ A ++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++ G P+ T+ +L+ C G+I KA M + G + + VTYG LI+GLCKAG
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 154 ETKAALQLLRRIE 166
+ A +LLR I+
Sbjct: 590 RVEVASKLLRSIQ 602
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G P+ T L+N C G + A ++ +L+ GY P+ T+ ++I G+C GE+ +A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ D MI + N VTY LI+ LCK + + A +L R + + P+
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ + P + ++ +L K+N L+R + KGI P++ T LI C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
A + + +G P+ T+ LI +C G++ +A++ M G + +TY
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+G CKA +T+ A ++ +E V N+V
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKR-GYHPNTITFTTLIK 112
+ + QM G + + V+ ++++ FC GR+ A + + + + G+ P+ TF TL+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G+C G + A+ D M+ +G+ + TY +I+GLCK GE K A+++L ++ P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 173 NAV 175
N V
Sbjct: 364 NTV 366
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ L + + L +M KG P+ T +LI+ C G+++ A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G + IT+ TLI G C + +A D+M G N VTY LI+GLCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 152 AGETKAALQLLRRI 165
+ + A QL+ ++
Sbjct: 518 SRRVEDAAQLMDQM 531
Score = 73.2 bits (178), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P + + ++ L K + + QM + +PN VT LI+ C +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A + + +G P+ TF +LI+G+C AM ++M +KG + ++ TY +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 145 LINGLCKAGETKAALQLLRRIE 166
LI+ LC G+ AL +L+++E
Sbjct: 441 LIDSLCSKGKLDEALNMLKQME 462
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F ++ L K H I + M +G P++ T +I+ C LG + A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ R PNT+T+ TLI +C ++ +A + +KG + T+ LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ A++L + +P+
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPD 434
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 68/139 (48%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ SL K +++ +QME G +++T LI+ FC + A + +
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
G N++T+ TLI G+C + + A D MI +G + ++ TY L+ C+ G+ K
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 157 AALQLLRRIEELAVQPNAV 175
A +++ + +P+ V
Sbjct: 558 KAADIVQAMTSNGCEPDIV 576
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +L L N V +M GI P++ T +LI C ++ A +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ G P+ TFTT+++G G++ A+ + M+ G ++ V+ V+++G CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 152 AGETKAALQLLRRI 165
G + AL ++ +
Sbjct: 272 EGRVEDALNFIQEM 285
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L K L QM +G P+ T L+ FC G I A ++ +
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
G P+ +T+ TLI G+C G + A + KG Y +I GL + +T
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 157 AALQLLRR-IEELAVQPNAV 175
A+ L R +E+ P+AV
Sbjct: 628 EAINLFREMLEQNEAPPDAV 647
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F ++ K + + + ME P++VT +I+ C G++ A +V
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 92 LGNILKRG--YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
L +LK+ HPN +++TTL++G C EI +A+ DM+++G + N VTY LI GL
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 150 CKA 152
+A
Sbjct: 327 SEA 329
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 18 TVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFK-GITPNMVTSTILI 76
+V F M M P + F +L L K+ L +M G+TP+ T LI
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
N FC ++ AF + ++ +P+ +T+ T+I G+C G++ A + M+ K
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD 276
Query: 137 F--NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N V+Y L+ G C E A+ + + ++PNAV
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTV--ISLSRQMEFKGITPNMVTST 73
D V F ML P + ++ L++ + + I + F P+ T
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
ILI C G ++ A V +L HP++ +++ LI+ +C E +A +++ K
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 134 GFQFNQ-------VTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
+ Y + LC G+TK A ++ R++ + VQ
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML + P + ++ K++ + M KG +P++VT + LIN +C R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ + + +RG NT+T+TTLI G C G++ A ++MI+ G + +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 145 LINGLCKAGETKAALQLLRRIEE 167
++ GLC E + A +L +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
I P +T +I+ FC R++ A +L ++ +G P+ +TF+TLI G C +
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M +M +G N VTY LI+G C+ G+ AA LL + V P+ +
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 116
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
+L+ P TIT+ ++I G C + A D M +KG + VT+ LING CKA
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 155 TKAALQLLRRIEELAVQPNAV 175
+++ + + N V
Sbjct: 61 VDNGMEIFCEMHRRGIVANTV 81
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P L+ I+ + + + ++M+ +G+ P+ +T LI GR+ A
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ GY P+T T+T+L+ GMC GE A+ ++M A+G N TY L++GLCK
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 152 AGETKAALQLLRRIEELAVQ 171
A ++L ++ V+
Sbjct: 383 ARLMDKGMELYEMMKSSGVK 402
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ ++ + + L ++ G P+ ++ FC L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G P+ IT+ TLI G+ G + +A + M+ G++ + TY L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 152 AGETKAALQLLRRIEELAVQPN 173
GE+ AL LL +E PN
Sbjct: 348 KGESLGALSLLEEMEARGCAPN 369
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFK-GITPNMVTSTILINCFCHLGRINFAF 89
PP + +L L K V +M + P++V+ TILI+ C+ + A
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
++ + G+ P+ + T++KG C + S+A+ + M +G + +Q+TY LI GL
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 150 CKAGETKAALQLLRRIEELAVQPN 173
KAG + A L+ + + +P+
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPD 334
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 60/148 (40%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K V + M P + ++ L+K + M G P+ T T
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+N C G A S+L + RG PN T+ TL+ G+C + K M ++ M +
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQL 161
G + Y L+ L K+G+ A ++
Sbjct: 400 GVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P+ VT+ I + C GR++ A ++ + ++ P+T T+ L+K +C ++
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 124 MHFHDDMIAK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
F D+M + + V++ +LI+ +C + + A+ L+ ++ +P+
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 62/115 (53%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M ++PN+ T ILI+ F + + V +L + PN I++ +LI G+C+
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G+IS+A+ D M++ G Q N +TY LING CK K AL + ++ P
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 39/197 (19%)
Query: 14 KADN---TVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMV 70
K DN ++ F ML + P + + ++ L IS+ +M G+ PN++
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 71 TSTILINCFCH-----------------------------------LGRINFAFSVLGNI 95
T LIN FC LG+I+ F++ +
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
+ G P+ T+ LI G+C NG I A D + +KG + VT+ +L+ G C+ GE+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGES 486
Query: 156 KAALQLLRRIEELAVQP 172
+ A LL+ + ++ ++P
Sbjct: 487 RKAAMLLKEMSKMGLKP 503
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M+ P + F ++ +L K + M+ G +PN+V+ LI+ +C
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 82 LG---RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
LG ++ A +VL +++ PN TF LI G + + +M +M+ + + N
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++Y LINGLC G+ A+ + ++ VQPN +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 43 SLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHP 102
+L K+N V + ++M + I PN+ T ++IN C G++N A V+ ++ G P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 103 NTITFTTLIKGMCH---NGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
N +++ TLI G C NG++ KA +M+ N T+ +LI+G K ++
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 160 QLLRRIEELAVQPNAV 175
++ + + + V+PN +
Sbjct: 317 KVFKEMLDQDVKPNVI 332
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+KAD + M+ + P +T F ++ K ++ + + ++M + + PN+++
Sbjct: 278 YKADAVLK---EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
LIN C+ G+I+ A S+ ++ G PN IT+ LI G C N + +A+ +
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+G Y +LI+ CK G+ L +E + P+
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++ ++ + K +L +ME +GI P++ T LI C G I A +
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G P+ +TF L++G C GE KA +M G + +TY +++ G CK
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 152 AGETKAALQLLRRIEE 167
G KAA + ++E+
Sbjct: 518 EGNLKAATNMRTQMEK 533
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L + + L Q+ KG+ P++VT IL+ +C G A +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IAKGFQFNQVTYGVLINGLC 150
L + K G P +T+ ++KG C G + A + M + + N +Y VL+ G
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
+ G+ + A LL + E + PN +
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRI 577
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
+ ++L ++M+ KGI +++I C G++N ++V N++++G PN +T LI
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR--RIEELA 169
G +G + A+ MI +GF+ + VTY V++NGLCK G + AL R + LA
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 170 V 170
+
Sbjct: 430 I 430
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 33 PITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVL 92
P F ++G L K+ ++ M KG PN+ T+LI+ + G + A +L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
++ G+ P+ +T++ ++ G+C NG + +A+ + G N + Y LI+GL KA
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 153 GETKAALQLLRRIEE 167
G A +L + E
Sbjct: 446 GRVDEAERLFEEMSE 460
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 35/151 (23%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK------- 112
ME I P++VT +I +C G+ A L ++ RG+ + IT+ T+I+
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 113 ----------------------------GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
G+C G++++ ++MI KG + N Y V
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+G K+G + A++LL R+ + +P+ V
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 65/141 (46%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P ++ ++ S K ++ + R+M+ GI P + T L+N ++ A
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
V + P+ +T+ T+IKG C G+ KAM DM +G + +++TY +I
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 151 KAGETKAALQLLRRIEELAVQ 171
+ + + L + ++E +Q
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQ 324
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFK-GITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
+ ++ + K I+L ++ME + G + T TIL++ R A + +
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
+ +G P F L G+C +G++++A D++ G + +IN LCKAG
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRI 588
Query: 156 KAALQLLRRIEE 167
K A +L I E
Sbjct: 589 KEACKLADGITE 600
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ +L K L +M KG+ P + T +I+ +C G I+ S
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + + +P+ IT+T+LI G+C +G S+A+ ++M K N++T+ LI GLCK
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
G + AL R +EE ++P++
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDS 754
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
STIL+ FC G+++ AF ++ + +R N T+ LI G I KA + M
Sbjct: 251 STILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR 310
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + Y VLI GLCK + + AL L I+ + P+
Sbjct: 311 RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
Score = 57.0 bits (136), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I G LA++ + L ++M F G P + +T L+ C GR A L ++ G
Sbjct: 515 IYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEG 574
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ + + T I G+ N + + + D+ A G + + Y VLI LCKA T A
Sbjct: 575 FLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEAD 634
Query: 160 QLLRRIEELAVQP 172
L + ++P
Sbjct: 635 ILFNEMVSKGLKP 647
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 56/110 (50%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
K I P+ + +I+INC +++ A ++L +I++ G P + + +I+GMC G +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
++ +M G + +Q T + L + + AL LL+++ +P
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFK--GITPNMVTSTILINCFCHLGRINFAF 89
P + +L +++K N + +R E + G + T T ++ +C+ G+ A
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
SV IL RG+ I+ T L+ C G++ KA + + + + N TY VLI+G
Sbjct: 235 SVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGF 293
Query: 150 CKAGETKAALQLLRRIEELAVQPN 173
K A QL ++ + + +
Sbjct: 294 VKESRIDKAFQLFEKMRRMGMNAD 317
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+K D V+ ++ P ++ I+ + K+ + L +M+ G+ P+ T
Sbjct: 453 NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTL 512
Query: 73 TILINCFCHLGRINF--AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM 130
+ C R +F A +L + G+ P T L+K +C NG A + DD+
Sbjct: 513 NCIYGCLAE--RCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDV 570
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+GF + V I+GL K L+L R I
Sbjct: 571 AGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDI 605
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 75/150 (50%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M M+ P + ++ SL K N ++L QM +GI ++V T+L++ G
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A +L+ PN +T+T L+ G+C G++S A M+ K N VTY
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ING K G + A+ LLR++E+ V PN
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G++P++ +LI+ FC +GR++FA S+L N R +T+T+ T+I G+C +G +A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEA 180
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEEL 168
F +M+ G + V+Y LI+G CK G A L+ I EL
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN+VT T L++ C G ++ A ++ +L++ PN +T++++I G G + +A+
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
M + N TYG +I+GL KAG+ + A++L + + + V+ N
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN 468
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 69/160 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + + M+ M P +T + L + +K + + GI +
Sbjct: 623 KMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYN 682
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI C LG A V+G++ RG+ P+T+TF +L+ G + KA+ + M+
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G N TY +I GL AG K + L ++ ++P+
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R M G P++VT + +IN C G++ +L + + +PN +T+TTL+ +
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A+ + M+ +G + V Y VL++GL KAG+ + A + + + E PN V
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 59/142 (41%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F ++ +H +S M GI+PN+ T +I G I
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + RG P+ T+ LI G G + +M + +MIA G TY VLI+
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+ A +LL+ + + V PN
Sbjct: 831 VGKMLQARELLKEMGKRGVSPN 852
Score = 53.1 bits (126), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
ME +G P+ VT L++ + + A S +++ G PN T+ T+I+G+ G
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 763
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
I + + +M ++G + + TY LI+G K G K ++ +
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 21 SFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
+F +L N P + + ++ L K + + QM K + PN+VT + +IN +
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
G + A S+L + + PN T+ T+I G+ G+ A+ +M G + N
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 141 TYGVLINGLCKAGETKAALQLLR 163
L+N L + G K L++
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVK 493
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
+ VS M N P +G ++ L K I LS++M G+ N L
Sbjct: 416 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 475
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+N +GRI ++ +++ +G + I +T+LI G+ A+ + ++M +G
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ V+Y VLI+G+ K G+ A + + E ++P+
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPD 572
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 61/133 (45%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
+S++ M+ P + + I+ L+ V +M+ +G+ P+ T LI+
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
+G + + ++ ++ G P T T+ LI + G++ +A +M +G N
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 139 QVTYGVLINGLCK 151
TY +I+GLCK
Sbjct: 853 TSTYCTMISGLCK 865
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 54/131 (41%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
ML + P + + ++ KK +SL R+ME + + PN T +I+ G
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A + + G N L+ + G I + DM++KG +Q+ Y
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYT 508
Query: 144 VLINGLCKAGE 154
LI+ K G+
Sbjct: 509 SLIDVFFKGGD 519
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 71/142 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ SL K L +M G+ PN VT +ILI+ FC G+++ A S
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
LG ++ G + + +LI G C G+IS A F +MI K + VTY L+ G C
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+ AL+L + + P+
Sbjct: 485 KGKINKALRLYHEMTGKGIAPS 506
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 62 FKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEIS 121
KG+ N T +LI FC GRI A ++ ++ G P+ IT+TT+I +C ++
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
KA+ + M KG + ++V Y LI+G C AGE A +L + + PN
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 62/115 (53%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M K + P +VT T L+ +C G+IN A + + +G P+ TFTTL+ G+ G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
I A+ ++M + N+VTY V+I G C+ G+ A + L+ + E + P+
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M++ P + + ++G K + L +M KGI P++ T T L++ G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I A + + + PN +T+ +I+G C G++SKA F +M KG + +Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 145 LINGLCKAGETKAA 158
LI+GLC G+ A
Sbjct: 583 LIHGLCLTGQASEA 596
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 72/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F +L L + + L +M + PN VT ++I +C G ++ AF
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + ++G P+T ++ LI G+C G+ S+A F D + + N++ Y L++G C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ + AL + + + + V + V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLV 648
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 70/151 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML + P ++ L K+ ++L +++ G++PN+ LI+ C +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A + + K G PN +T++ LI C G++ A+ F +M+ G + + Y
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LING CK G+ AA + + ++P V
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 71/152 (46%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ + P + ++ ++ SL + + ME G N+V +LI+ C
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
++ A + ++ + P+ +T+ TL+ G+C E + D+M+ F ++
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
L+ GL K G+ + AL L++R+ + V PN
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 54 ISLSRQMEFKGITPNMVTSTILIN-CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
+S+ ++M +G+ ++V +LI+ H R F F +L + RG P+ + +T++I
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF-FGLLKEMHDRGLKPDDVIYTSMID 690
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G+ +A D MI +G N+VTY +INGLCKAG A L +++ ++ P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 173 NAV 175
N V
Sbjct: 751 NQV 753
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHL---GRINFA 88
P + ++ L K L +M+ PN VT CF + G ++
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT----YGCFLDILTKGEVDMQ 770
Query: 89 FSV-LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
+V L N + +G NT T+ LI+G C G I +A MI G + +TY +IN
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 148 GLCKAGETKAALQLLRRIEELAVQPNAV 175
LC+ + K A++L + E ++P+ V
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +L L K H + L M GI P++ T +I C L ++ A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++ G N + + LI G+C ++ +A+ D+ K + + VTY L+ GLCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 152 AGETKAALQLLRRIEELAVQPN 173
E + L+++ + L P+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPS 331
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 67/142 (47%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + ++ L KK + + + + + K + P++VT L+ C + ++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+L + P+ ++L++G+ G+I +A++ ++ G N Y LI+ LCK
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ A L R+ ++ ++PN V
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDV 403
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 38/172 (22%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I GSL K+ L ++M +G+ P+ V T +I+ G AF + ++ G
Sbjct: 654 IDGSLKHKDRKL-FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 100 YHPNTITFTTLIKGMCHNG------------------------------------EISKA 123
PN +T+T +I G+C G ++ KA
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ H + I KG N TY +LI G C+ G + A +L+ R+ V P+ +
Sbjct: 773 VELH-NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G++P+ +T T +IN C + A + ++ ++G P+ + + TLI G C GE+ KA
Sbjct: 817 GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 124 MHFHDDMIAKGFQFNQVT 141
++M+ +G N T
Sbjct: 877 TELRNEMLRQGLIPNNKT 894
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ P + T + L++ A + +++ G P+ +T +I+ +C ++S+A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M A G N V Y VLI+GLCK + A+ + + + ++P+ V
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFK-GITPNMVTSTILINCFCHLGRINFAFS 90
P T F ++ S ++ V + R+ME + G +PN+ + +L+ +C G ++ A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
V + RG + + + T+I G+C N E+ KA DM KG + +TY L+NG C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
KAG+ + L + R ++ + + +
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGL 387
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHL---GRINFAFSVLGNILKRG-YHPNTITFTTLIKG 113
R+M+ KG + +T L+ C R+ A ++ + ++ ++P+ + L+K
Sbjct: 375 REMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKR 434
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG-ETKAALQLLRRIEELAVQP 172
+C +G++ +A++ +M+ KGF+ +Q TY I+G G E +AL + E L ++
Sbjct: 435 LCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAESLKLRA 494
Query: 173 N 173
Sbjct: 495 E 495
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + ++G L L R M KGI +T L+N +C G ++ V
Sbjct: 316 IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYR 375
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHD---DMIAKG-FQFNQVTYGVLINGL 149
+ ++G+ + +T L++G+C + + + + D D + + F ++ Y +L+ L
Sbjct: 376 EMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 150 CKAGETKAALQL 161
C+ G+ AL +
Sbjct: 436 CEDGKMDRALNI 447
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 77.0 bits (188), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 77/144 (53%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +G ++ LAK + L + + K I N+V + LI+ F +GRI+ A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++++G PN T+ +L+ + EI++A+ M NQVTYG+LINGLCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ A + +++ ++P+ +
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTI 763
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + +L +L K + + M+ TPN VT ILIN C + + N AF
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ K+G P+TI++TT+I G+ G I++A D A G + Y +I GL
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 152 AGETKAALQLL 162
A L
Sbjct: 810 GNRAMDAFSLF 820
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++G+ + NH +++L +QM+ G P + T LI F GR++ A S+
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + + + I G++ A F ++ A G + ++VTY +I LCK
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 152 AGETKAALQLLRRIEE 167
A A+++ +E+
Sbjct: 286 ANRLDEAVEMFEHLEK 301
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M+ +G + I+I+ FC G++N A+ +L + +G+ P +T+ ++I G+
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +A ++ +K + N V Y LI+G K G A +L + + + PN
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 51 FTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTL 110
+ V+ + R+ +F+ P T LI F + + ++ + + GY P FTTL
Sbjct: 153 YDVVQMMRKFKFR---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 111 IKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAV 170
I+G G + A+ D+M + + V Y V I+ K G+ A + IE +
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 171 QPNAV 175
+P+ V
Sbjct: 270 KPDEV 274
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + IL L K + + +M+ K PN+ T ILI+ C G+++ AF +
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ K G PN T ++ +C + ++ +A ++M K +++T+ LI+GL K
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A ++ ++ + + N++
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSI 483
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 56/112 (50%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
KG+TPN+ T L++ IN A ++ + PN +T+ LI G+C + +K
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
A F +M +G + + ++Y +I+GL KAG A L R + P++
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 68/150 (45%)
Query: 15 ADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
+D ++ F M + P + LF ++ AK+ + +SL +M+ + ++V +
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
I+ F +G+++ A+ I G P+ +T+T++I +C + +A+ + +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRR 164
Y +I G AG+ A LL R
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M++ N P + L + + K ++ +++ + P+ + +ILI+ G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
N + + ++ ++G +T + +I G C G+++KA ++M KGF+ VTYG
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I+GL K A L + ++ N V
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 63/143 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ L K ++ +M++K TP+ +T LI+ +GR++ A+ V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L N+I +T+LIK ++G + DMI + + ++ + K
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
AGE + + I+ P+A
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDA 552
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D + F M + P ++ + ++ L + T L M+ G+ PN+ T
Sbjct: 358 KVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+++ C +++ A ++ + + P+ ITF +LI G+ G + A ++ M+
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 134 GFQFNQVTYGVLINGLCKAG 153
+ N + Y LI G
Sbjct: 477 DCRTNSIVYTSLIKNFFNHG 496
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D+ +S M + I L+ + S K ++E G+ P+ VT T
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+I C R++ A + ++ K P T + T+I G G+ +A + AK
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + + Y ++ L K G+ AL++ +++ A PN
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PN 376
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 77.0 bits (188), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
IL L K+ L +ME +GI PN+V+ ++ C ++ A V NIL++G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
PN T++ LI G N + A+ + M + + N V Y +INGLCK G+T A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 160 QLLRRIEE 167
+LL + E
Sbjct: 569 ELLANMIE 576
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQM-EFKGITPNMVT 71
H N + HM N ++ I+ L K L M E K + + ++
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
+I+ F G ++ A + + G PN IT+T+L+ G+C N + +A+ D+M
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
KG + + YG LI+G CK ++A L + E + P+
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 76/160 (47%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ V+++ M P + + ++ L K N + + +M+ KG+ ++ L
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ FC + A ++ +L+ G +P+ + +LI G + G + A+ + M+ G
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + TY LI+GL K G A +L ++ + + P+ +
Sbjct: 721 RCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 74/142 (52%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I +G ++ K+++ + +L ++ +G+ P+ LI+ F +LG + A +
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+LK G + T+TTLI G+ +G + A + +M A G +++ Y V++NGL K G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ +++ +++ V PN +
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVL 795
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 40 ILGSLAKKNHCFTVI-----SLSRQMEFKGI-TPNMVTSTILINCFCHLGRINFAFSVLG 93
+L SLA + C T+ SL R+M+ K + P+ T T +I G ++ A +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+L G N + T+LI G C N ++ A+ D M +G N VT+ VLI K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 154 ETKAALQLLRRIEELAVQPN 173
E + AL+ +++E L + P+
Sbjct: 389 EMEKALEFYKKMEVLGLTPS 408
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 35/179 (19%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P T IL S+ K+ + I L +M GI+ N+V +T LI C + A
Sbjct: 302 PSQETYTSVILASV-KQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG-----FQFNQVTYG-- 143
+ + K G PN++TF+ LI+ NGE+ KA+ F+ M G F + + G
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 144 ---------------------------VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+++ LCK G+T A +LL ++E + PN V
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 59/129 (45%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ I+ K+ + ++ +M GI+PN++T T L+N C R++ A + +
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+G + + LI G C + A +++ +G +Q Y LI+G G
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 157 AALQLLRRI 165
AAL L +++
Sbjct: 707 AALDLYKKM 715
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL-KRGYHPNTITFTTLIKGM 114
LSR +E +G P+ + ++ + C + A S+L + K+ P+ T+T++I
Sbjct: 256 LSRAIE-RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS 314
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G + A+ D+M++ G N V LI G CK + +AL L ++E+ PN+
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374
Query: 175 V 175
V
Sbjct: 375 V 375
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ V +TIL + C G+ + A +L + RG PN +++ ++ G C + A
Sbjct: 439 GLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+++ KG + N TY +LI+G + + + AL+++ + ++ N V
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 51/112 (45%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L K + L +M+ G+ P+ + T+++N G+ + +
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
K PN + + +I G G + +A HD+M+ KG + T+ +L++G
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
SL ++M+ I P+ VT L+ C G+ A ++G + +RG P+ I++ TLI G
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G+ A D+M++ GF +TY L+ GL K E + A +LLR ++ + PN
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 70/136 (51%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L +KN L ++ KG+ P++V L++ C +G ++ AFS+L +
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+P+ +T+ L++G+C G+ +A +M +G + + ++Y LI+G K G+TK
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 157 AALQLLRRIEELAVQP 172
A + + L P
Sbjct: 555 HAFMVRDEMLSLGFNP 570
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M+ P + ++ L +N L R++ KGI + VT ILIN +C G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
AF++ ++ G P T+T+LI +C + +A + ++ KG + + V
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
L++G C G A LL+ ++ +++ P+ V
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + IL + + V+ R+M+ G+ P+ V+ ILI + G + AF+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++K+G P T+ TLI G+ +I A ++ KG + VTY +LING C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 152 AGETKAALQLLRRIEELAVQP 172
G+ K A L + +QP
Sbjct: 410 HGDAKKAFALHDEMMTDGIQP 430
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + F M P IL L++ N M I N+ T I+
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
IN C G++ A LG + G P +T+ TL++G G I A +M +KGF
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Q + TY +++ +C G A ++LR ++E+ + P++V
Sbjct: 292 QPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ KG P+M T +++ C+ GR A VL + + G P+++++ LI+G +NG
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ A + D+M+ +G TY LI+GL + +AA L+R I E + ++V
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV 398
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
+L +M GI P T T LI C + A + ++ +G P+ + TL+ G
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
C G + +A +M + VTY L+ GLC G+ + A +L+ ++ ++P+
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 175 V 175
+
Sbjct: 538 I 538
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 28 MNPPPPIT-LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRIN 86
++ P P+T L E++ S +KN + + T + + +L+ C C L ++
Sbjct: 115 LSSPKPVTQLLKEVVTS--RKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172
Query: 87 FAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLI 146
A + ++G++P T T ++ + I A F+ DM + N T+ ++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 147 NGLCKAGETKAALQLLRRIEELAVQPNAV 175
N LCK G+ K A L +E ++P V
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIV 261
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ KK+ F +S+ +ME G+ PN+VT I+ F GR+ A +
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
I K N +T+TTLI G C +I +A+ + M ++GF VTY ++ LC+
Sbjct: 296 FREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G + A +LL + ++P+ +
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNI 378
Score = 63.2 bits (152), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + + +++ L R+++ +T N VT T LI+ +C + I+ A +
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRL 329
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ RG+ P +T+ ++++ +C +G I +A +M K + + +T LIN CK
Sbjct: 330 REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 152 AGETKAALQLLRRIEE 167
+ +A+++ +++ E
Sbjct: 390 IEDMVSAVKVKKKMIE 405
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L +ME KG+ P++ T LI+ +C A SV + + G PN +T+ + I G
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 116 HNGEISKAMHF----HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G + +A DD+ A N VTY LI+G C+ + AL+L +E
Sbjct: 285 REGRMREATRLFREIKDDVTA-----NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Query: 172 PNAV 175
P V
Sbjct: 340 PGVV 343
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ L ME +G +P +VT ++ C GRI A +L + + P+ IT TLI
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
C ++ A+ MI G + + +Y LI+G CK E + A + L + E P
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L SL K+ TV + ++M G+ N+ +L++ G A +L + ++G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
P+ T+ TLI C +A+ D M G N VTY I+G + G + A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 160 QLLRRIEE 167
+L R I++
Sbjct: 294 RLFREIKD 301
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 56/136 (41%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + IL L + L +M K I P+ +T LIN +C + + A V
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++ G + ++ LI G C E+ A MI KGF TY L++G
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 152 AGETKAALQLLRRIEE 167
+ +LL E+
Sbjct: 460 QNKQDEITKLLEEFEK 475
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
L M+ + P I ++ N + ++ QME GI ++V TILI+ C
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A VL + RG PN +T+++LI G+C +G ++ A +M +K N +T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ LI+ K G+ + + + ++++ PN
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 152
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K +M+ K I PN++T + LI+ + G+++ SV
Sbjct: 81 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSV 140
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++ PN T+++LI G+C + + +A+ D MI+KG N VTY L NG K
Sbjct: 141 YKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFK 200
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ ++LL + + V N V
Sbjct: 201 SSRVDDGIKLLDDMPQRGVAANTV 224
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ D + M+ P + + + K + I L M +G+ N V+
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 226
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
LI + G+I+ A V G + G PN ++ ++ G+ NGE+ KA+ + M
Sbjct: 227 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +TY ++I+G+CKA K A L +++ V+P+
Sbjct: 287 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
GI P++VT++ L+N FC I A V G + K G + + T LI +C N + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ M +G N VTY LI GLCK+G A + L ++ + PN +
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ +L K + + ++M+ +GI+PN+VT + LI C GR+ A L + +
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+PN ITF+ LI G++SK + MI N TY LI GLC A+
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 160 QLLRRIEELAVQPNAV 175
++L + PN V
Sbjct: 174 KMLDLMISKGCTPNVV 189
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 20 SSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
S + M+ M+ P + + ++ L N I + M KG TPN+VT + L N F
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
R++ +L ++ +RG NT++ TLIKG G+I A+ M + G N
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEE 167
+Y +++ GL GE + AL +++
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQK 286
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ + AK+ V S+ + M I PN+ T + LI C R++ A +
Sbjct: 116 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 175
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L ++ +G PN +T++TL G + + + DDM +G N V+ LI G +
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG+ AL + + + PN
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPN 257
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
++K G P+ +T ++L+ G C + I A++ M G + + V +LI+ LCK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 155 TKAALQLLRRIEELAVQPNAV 175
AL++L+R+++ + PN V
Sbjct: 64 VVPALEVLKRMKDRGISPNVV 84
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K+ + + L +ME G N VT L+ C LG +N +
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++++G PN T++ L++ +A+ D++I KG + N V+Y VL+ G CK
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G T A+ L R + + N V
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVV 282
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 17 NTVSSFLHMLHM---NPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
N SF H+ + P + ++L L K N I + M GI P+ T
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+N C G + +A ++ + GY NT+T+ L++G+C G +++++ F + ++ K
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G N TY L+ K T A++LL I +PN V
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 55 SLSRQMEF------KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFT 108
SL++ ++F KG+ PN T + L+ + A +L I+ +G PN +++
Sbjct: 191 SLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYN 250
Query: 109 TLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEEL 168
L+ G C G AM ++ AKGF+ N V+Y +L+ LC G + A LL ++
Sbjct: 251 VLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG 310
Query: 169 AVQPNAV 175
P+ V
Sbjct: 311 DRAPSVV 317
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 61/114 (53%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ L ++ KG PN+V+ +L+ FC GR + A ++ + +G+ N +++ L++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+C +G +A +M + VTY +LIN L G T+ ALQ+L+ + +
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Score = 57.0 bits (136), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + +L K+ ++L R++ KG N+V+ IL+ C C GR A S+
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG---FQFNQVTYGVLING 148
L + P+ +T+ LI + +G +A+ +M +KG F+ +Y +I
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIAR 362
Query: 149 LCKAGETKAALQLLRRIEELAVQPN 173
LCK G+ ++ L + +PN
Sbjct: 363 LCKEGKVDLVVKCLDEMIYRRCKPN 387
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
+ ++ SL +K + F L +M G P+ T + LI C G A VL +I
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL-SI 483
Query: 96 LKRGYH--PNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++ + P F +I G+C AM + M+ K N+ TY +L+ G+
Sbjct: 484 MEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHED 543
Query: 154 ETKAALQLL 162
E + A ++L
Sbjct: 544 ELELAKEVL 552
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + F ML P T + +L KK + M + + P++V +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+++ F G ++ A ++ + G P+ + +T LI+G C G IS AM+ ++M+ +
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G + VTY +++GLCK A +L + E A+ P++
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++GSL + + +++ G+ N+ T I++N C G++ + L + ++G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+P+ +T+ TLI G + +A + M KGF TY +INGLCK G+ + A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 160 QLLRRIEELAVQPNA 174
++ + + P++
Sbjct: 326 EVFAEMLRSGLSPDS 340
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 17 NTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILI 76
N + F M + + +L K T + M K I P ++ +IL+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
N C G + AF V ++ + P + ++IKG C +G S F + MI++GF
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ ++Y LI G + A L++++EE
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 77/158 (48%)
Query: 18 TVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
T F M + P + F ++ + + + ++ G+ P+ V TILI
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF 137
+C G I+ A ++ +L++G + +T+ T++ G+C + +A ++M +
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 138 NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ T +LI+G CK G + A++L ++++E ++ + V
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ +L K V + Q++ KG+ P++VT LI+ + G + AF ++ + +G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ P T+ T+I G+C +G+ +A +M+ G + TY L+ CK G+
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 160 QLLRRIEELAVQPNAV 175
++ + V P+ V
Sbjct: 361 KVFSDMRSRDVVPDLV 376
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
ML + + IL L K+ L +M + + P+ T TILI+ C LG
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A + + ++ + +T+ TL+ G G+I A DM++K ++Y
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQP 172
+L+N LC G A ++ + ++P
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P PI+ + ++ +L K H + +M K I P ++ +I +C G + S
Sbjct: 548 PTPIS-YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK--GFQFNQVTYGVLING 148
L ++ G+ P+ I++ TLI G +SKA M + G + TY +++G
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 149 LCKAGETKAALQLLRRIEELAVQPN 173
C+ + K A +LR++ E V P+
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPD 691
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ + + K L M KG +P + T +IN C G+ A V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P++ T+ +L+ C G++ + DM ++ + V + +++ +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+G AL ++E + P+ V
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNV 411
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 61/122 (50%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ L ++M+ K I ++VT L++ F +G I+ A + +++ + P I+++ L+
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+C G +++A D+MI+K + + +I G C++G L ++ P+
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 174 AV 175
+
Sbjct: 620 CI 621
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 62/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++ ++ +K ++L +M +G ++VT +++ C + A +
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +R P++ T T LI G C G + AM M K + + VTY L++G K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ A ++ + + P +
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPI 551
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 20 SSFLH-MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFK--GITPNMVTSTILI 76
SFL M+ P + ++ ++ + L ++ME + G+ P++ T ++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ FC ++ A VL +++RG +P+ T+T +I G +++A HD+M+ +GF
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 73/142 (51%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +T++ + L K + I R++ G+ P+ VT T +I + G+ A ++
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L++ +P+ IT+ LI G G + +A + +M +G + N +T+ L+ G+CK
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG A + L ++EE + PN
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPN 654
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ L + + L +M + I P+++T T L+ F G ++ A V
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT-YGVLINGLC 150
+L++G P+ +TT G G+ KA H++M+A +T Y V I+GLC
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
K G A++ R+I + + P+ V
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHV 551
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P++ + I+ C +G + A I + G P+ +T+TT+I+G NG+ A +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+D+M+ K + +TY VLI G KAG + A Q +++ V+PN +
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
+L +M K + P+++T +LI GR+ AF + KRG PN +T L+ GM
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
C G I +A + M +G N+ +Y +LI+ C + + ++L + + + ++P+
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
++ +M GI P T I I C GRI+ A +L ++ P+ +++ TL+ G
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYI 385
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G+ +A DD+ A + VTY LI+GLC++G + A +L + + P+ +
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 445
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F +L S K V + +M+ + I + VT ILIN F G++ A
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G++ + G+ +F LI+G C G A D+M+ G TY + I LC
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 152 AGETKAALQLL 162
G A +LL
Sbjct: 356 FGRIDDARELL 366
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 64 GITPNMVT-STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
GI P ++T +T+L +CF G + + + +R + +T+ LI G NG++ +
Sbjct: 233 GIMPTVITFNTMLDSCF-KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEE 291
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
A FH DM GF ++ LI G CK G
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 322
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P IT F I G AK S +M+ +G+ PN++T L+ C G I+ A+
Sbjct: 583 PSVITYFVLIYGH-AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
L + + G PN ++T LI C + + + + +M+ K + + T+ L L
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701
Query: 151 KAGETKAALQLLRRI 165
K E++ ++ L R+
Sbjct: 702 KDHESR-EVEFLERL 715
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M KG P++ I++ +N A +V +++ G P ITF T++ G
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL---LRRIEELAVQP 172
++ + +M + +F++VTY +LING K G+ + A + +RR AV P
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR-SGFAVTP 308
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 64/115 (55%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ +GI+PN+VT ++ + G + VL +L G+ P+ ITF+ +I +C
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
EI A +M+ G + N++TY +LI C G+T +++L +++E + P+
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
+QM G+ ++ + +I+C C RI A L + RG PN +TF T + G
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVR 473
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ K + ++ GF+ + +T+ ++IN LC+A E K A + + E ++PN +
Sbjct: 474 GDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 64/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F L + + V + ++ G P+++T +++INC C I AF
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G PN IT+ LI+ C G+ +++ M G + Y I CK
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ K A +LL+ + + ++P+
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPD 599
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 58/143 (40%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F I+ L + ++M GI PN +T ILI C G + + +
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G P+ + I+ C ++ KA M+ G + + TY LI L +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
+G A ++ IE P++
Sbjct: 613 SGRESEAREMFSSIERHGCVPDS 635
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 42 GSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYH 101
G L +C V + Q+ F G+ P+ +I+ ++ A+ + G
Sbjct: 156 GRLGLAKYCNDVFA---QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCK 212
Query: 102 PNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
P+ T+ LI G+C G + +A+ M +G + N TY +LI+G AG AL+
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 162 LRRIEELAVQPN 173
L + + PN
Sbjct: 273 LEMMRVRKLNPN 284
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 21 SFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
SFL M P L+ ++ +L K N +QM G P+ T ILI+ C
Sbjct: 172 SFLGM-----KPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
G ++ A ++ + + G PN T+T LI G G + +A+ + M + N+
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 141 TYGVLINGL------CKAGE 154
T ++G+ CKA E
Sbjct: 287 TIRTFVHGIFRCLPPCKAFE 306
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 59/135 (43%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ + KK I L +QME +G PN+ T TILI+ F GR++ A L + R
Sbjct: 221 LIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRK 280
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+PN T T + G+ KA + K +V Y ++ L K
Sbjct: 281 LNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETG 340
Query: 160 QLLRRIEELAVQPNA 174
Q LR+I E P++
Sbjct: 341 QFLRKIGERGYIPDS 355
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+LI + LG + V I G P+T + +I + + + A M +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + ++ TY +LI+G+CK G A++L++++E+ +PN
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPN 249
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
++ P P + + ++ L K + +M +G+ P+ T LI +C G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A ++G+ + G+ P+ T+ +LI G+CH GE ++A+ ++ + KG + N + Y
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQP 172
LI GL G A QL + E + P
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIP 424
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + L+ ++ L+ + L+ +M KG+ P + T IL+N C +G ++ A +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++ +GY P+ TF LI G ++ A+ D M+ G + TY L+NGLCK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ + ++ + + E PN
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPN 530
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 49/92 (53%)
Query: 62 FKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEIS 121
F G P+ T LI+ CH G N A ++ L +G PN I + TLIKG+ + G I
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+A ++M KG T+ +L+NGLCK G
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
++ F ++L L KK L ++ +G+ PN+ T + I C G ++ A ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++++G P+ IT+ LI G+C N + +A + M+ +G + + TY LI G CK G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 154 ETKAALQLLRRI 165
+QL RI
Sbjct: 336 ----MVQLAERI 343
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 55/113 (48%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G P+++T LI C + A LG ++ G P++ T+ TLI G C G +
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A D + GF +Q TY LI+GLC GET AL L ++PN +
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ L K L + M KG P++ T ILI+ + ++ A +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +L G P+ T+ +L+ G+C + M + M+ KG N T+ +L+ LC+
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ AL LL ++ +V P+AV
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAV 567
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 54/104 (51%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ T L+N C + ++++G PN TF L++ +C ++ +A
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ ++M K + VT+G LI+G CK G+ A L R++EE
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K V+ F M + P + + I+ L + + +M +GITP++ + T
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I + FC R + A +L N+ +G N + + T++ G ++ M+A
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G T+ L+ LCK G+ K +LL ++ + V PN
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K +N + ML P + + +L L K + V+ + M KG PN+ T
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IA 132
IL+ C +++ A +L + + +P+ +TF TLI G C NG++ A M A
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ TY ++I+ + A +L + + + + P+
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + ++G ++N L +M G++ + T L+ C G + +L
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
++KRG PN T+ I+G+C GE+ A+ +I +G + + +TY LI GLCK
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 154 ETKAALQLLRRIEELAVQPNA 174
+ + A L ++ ++P++
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDS 321
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
KGI PN++ LI + G I A + + ++G P TF L+ G+C G +S
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
A MI+KG+ + T+ +LI+G + + AL++L + + V P+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQME--FKGITPNMVT 71
K D + M + + P FG ++ K +L R+ME +K ++ + T
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK-VSSSTPT 604
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
I+I+ F + A + ++ R P+ T+ ++ G C G ++ F +M+
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
GF + T G +IN LC A ++ R+ + + P AV
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+GI+P+ VT ++IN FC G + A +L + K G +PN ++ L+ G C G+I +
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
A D++ G + + V Y L+N C+ GET A++LL
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY-HPNTITFTTLIKGMCHNGEISK 122
G+ PN IL+ C G INFAF V+ + + G +PN+IT++TL+ + + +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 123 AMHFHDDMIAK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
A+ +DMI+K G + VT+ V+ING C+AGE + A ++L +++ PN
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P P+T F ++ + + M+ G PN+ + L+N FC +G+I A
Sbjct: 266 PDPVT-FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQ 324
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ K G +T+ +TTL+ C NGE +AM +M A + + +TY V++ GL
Sbjct: 325 TFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLS 384
Query: 151 KAGETKAALQLLRRIEELAVQPN 173
G ++ ALQ+L + V N
Sbjct: 385 SEGRSEEALQMLDQWGSEGVHLN 407
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ + V T L+NCFC G + A +LG + +T+T+ +++G+ G +A
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ D ++G N+ +Y +++N LC GE + A++ L + E + P
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 48 NHCFTVISLSRQMEFKGIT-PNMVTSTILINCFCHLGRINFAFSVLGNIL-KRGYHPNTI 105
N F V+ +M+ GI+ PN +T + L++C R A + +++ K G P+ +
Sbjct: 213 NFAFLVVE---EMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV 269
Query: 106 TFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
TF +I G C GE+ +A D M G N Y L+NG CK G+ + A Q +
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 166 EELAVQPNAV 175
++ ++ + V
Sbjct: 330 KKTGLKLDTV 339
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 73.9 bits (180), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 66/115 (57%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+ME +G P++VT L++ +C GR+ AF + + +R P+ +T+T+LIKG+C +G
Sbjct: 261 KMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDG 320
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +A M+ +G + + ++Y LI CK G + + +LL + +V P+
Sbjct: 321 RVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
GI PN T IL N FC+ L + + G+ P+ +T+ TL+ C G + +A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + M + + VTY LI GLCK G + A Q R+ + ++P+ +
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ S ++ L + M + + P++VT T LI C GR+ A
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT 328
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ RG P+ +++ TLI C G + ++ +M+ ++ T V++ G +
Sbjct: 329 FHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Query: 152 AGETKAALQLLRRIEELAV 170
G +A+ + + L V
Sbjct: 389 EGRLLSAVNFVVELRRLKV 407
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D F M P + +L L K N ++ M+ GI P+++ T
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ G + L ++K G P+ + +T +I G +GE+ KA +M K
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G N TY +I GLC AGE + A LL+ +E PN V
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFV 430
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM + P + + ++ L++ + +M G P++V T++I + G
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG 373
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
++ A + + +G PN T+ ++I+G+C GE +A +M ++G N V Y
Sbjct: 374 ELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 433
Query: 144 VLINGLCKAGETKAALQLLRRI 165
L++ L KAG+ A +++R +
Sbjct: 434 TLVSYLRKAGKLSEARKVIREM 455
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ F ++ S K++ F +S+ +M G+ PN+V+ ++I+ C G + FA +LG
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 94 NI-LKRG--YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ + G PN +T+ ++I G C G + A DM+ G N+ TYG L++
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
+AG + AL+L + + N V
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTV 362
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 19 VSSFLHMLHMNPPPPITLFGEIL-GSLAKKNHCFTVISLSRQMEFKG--ITPNMVTSTIL 75
+S F ML P + F ++ G+ + F + L + G ++PN VT +
Sbjct: 238 LSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSV 297
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
IN FC GR++ A + G+++K G N T+ L+ G +A+ D+M +KG
Sbjct: 298 INGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL 357
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
N V Y ++ L G+ + A+ +LR + +Q
Sbjct: 358 VVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ 393
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
+G L N + ++M+ G N+ T ++I FC ++ A SV +LK G
Sbjct: 190 MGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGV 249
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF---NQVTYGVLINGLCKAGETKA 157
PN ++F +I G C G++ A+ M F N VTY +ING CKAG
Sbjct: 250 WPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR--- 306
Query: 158 ALQLLRRI 165
L L RI
Sbjct: 307 -LDLAERI 313
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++ L + + + RQ+ K + ++V L++ F ++ A +LG++L +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ I+F TLI G G++ +A+ +D MI N V Y ++NGL K G AA
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 160 QLLRRIE 166
++ +E
Sbjct: 522 AVVNAME 528
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
+ C ++ I+ + V + GY N TF +I C ++ +A+ M+ G
Sbjct: 189 FMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCG 248
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA---VQPNAV 175
N V++ ++I+G CK G+ + ALQLL ++ ++ V PNAV
Sbjct: 249 VWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAV 292
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ K + ++M + P++ T ILIN +C + + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++G PN ++F TLI+G +G+I + + +MI G +F++ T +L++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 152 AGETKAALQLL 162
G A L+
Sbjct: 311 EGRVDDACGLV 321
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D+ L +L+ P +G ++ L +N + + ++ KG TP + T
Sbjct: 313 RVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+ GR A + ++ G P+++TF L++ +C + + A +K
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSK 432
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G++ ++ TY VL++G K G K L+ + + + P+
Sbjct: 433 GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 76 INCFCHLGRINFAFSVLGNILKR--GYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+ +C ++++A + +KR PN + T++ G +G++ KA+ F+ M +
Sbjct: 164 IDAYCRARKMDYALLAF-DTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE 222
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + T+ +LING C++ + AL L R ++E +PN V
Sbjct: 223 RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVV 264
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + + M P + F ++ + + + L R+M+ KG PN+V+ L
Sbjct: 210 DKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I F G+I + +++ G + T L+ G+C G + A D++ K
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEEL 168
++ YG L+ LC GE K A++ + +EEL
Sbjct: 330 LPSEFDYGSLVEKLC--GENK-AVRAMEMMEEL 359
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 71/162 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D + F M P + F ++ + ++ +M G + T
Sbjct: 243 KFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCE 302
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL++ C GR++ A ++ ++L + P+ + +L++ +C + +AM +++ K
Sbjct: 303 ILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + L+ GL K+G T+ A + ++ + P++V
Sbjct: 363 GQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSV 404
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 73.2 bits (178), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
PP + F +L ++ + QM+ G+ P++V T L++ + H G++ A+
Sbjct: 233 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 292
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGE-ISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
++ ++ KRG+ PN +T LI+ +C + + +AM +M G + + VTY LI+G
Sbjct: 293 LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF 352
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
CK G +L + + V P+ V
Sbjct: 353 CKWGMIDKGYSVLDDMRKKGVMPSQV 378
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHL-GRINFAFS 90
P I +F +L A L M +G PN+ T+LI C R++ A
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
V + + G + +T+T LI G C G I K DDM KG +QVTY ++
Sbjct: 329 VFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 151 KAGETKAALQLLRRIEELAVQPN 173
K + + L+L+ +++ P+
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPD 411
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 59/114 (51%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+ME G ++VT T LI+ FC G I+ +SVL ++ K+G P+ +T+ ++
Sbjct: 332 EMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKE 391
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ + + + M +G + + Y V+I CK GE K A++L +E + P
Sbjct: 392 QFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +FG +L +L K + M K PN+ T L+ +C G++ A V
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEV 258
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + G P+ + FT L+ G H G+++ A +DM +GF+ N Y VLI LC+
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCR 318
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
LF ++ A N + + +M G+ P+ L++ C G + A V +
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED- 227
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
++ + PN FT+L+ G C G++ +A M G + + V + L++G AG+
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 156 KAALQLLRRIEELAVQPN 173
A L+ + + +PN
Sbjct: 288 ADAYDLMNDMRKRGFEPN 305
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +I+ + KK + L +M+ +G P+++ ++I C LG + A +
Sbjct: 375 PSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVL 145
+ G P TF +I G G + +A + +M+++G F+ YG L
Sbjct: 435 WNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSAPQYGTL 487
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K SL M GI P VT +L++ + G + A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G ++ G P+ +TFT+LI G C G++S+ ++M A+G N TY +LIN LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 152 AGETKAALQLLRRIEELAVQP 172
A +LL ++ + P
Sbjct: 395 ENRLLKARELLGQLASKDIIP 415
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGI-TPNMVTSTILINCFCHLGRINFAFS 90
P I + ++ K N + + ++ + +P++VT T +I+ +C G++ A S
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+L ++L+ G +P +TF L+ G GE+ A MI+ G + VT+ LI+G C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 151 KAGETKAALQLLRRIEELAVQPNA 174
+ G+ +L + + PNA
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNA 382
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 19 VSSFLH-MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
SS L ML + P F ++ AK T + +M G P++VT T LI+
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF 137
+C +G+++ F + + RG PN T++ LI +C+ + KA + +K
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 138 NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y +I+G CKAG+ A ++ +E+ +P+ +
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY--HPNTITFTTLIKGMCHNGEIS 121
G P++VT LI FC +N A + ++ K G P+ +T+T++I G C G++
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+A DDM+ G VT+ VL++G KAGE A ++ ++ P+ V
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ + L +M +G+ PN T +ILIN C+ R+ A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
LG + + P + +I G C G++++A ++M K + +++T+ +LI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A+ + ++ + P+ +
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKI 488
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ +L +N L Q+ K I P +I+ FC G++N A +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + K+ P+ ITFT LI G C G + +A+ M+A G +++T L++ L K
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 152 AGETKAALQL 161
AG K A L
Sbjct: 500 AGMAKEAYHL 509
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 32 PPITLFGEILGSLAKKNHC-FTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P L G ++ S A+K F L + E +G MV +++L N L R+ A
Sbjct: 136 PNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCC--MVVNSLL-NTLVKLDRVEDAMK 192
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ L+ +T TF LI+G+C G+ KA+ M G + + VTY LI G C
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC 252
Query: 151 KAGETKAALQLLRRIEELAV-QPNAV 175
K+ E A ++ + ++ +V P+ V
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVV 278
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K SL M GI P VT +L++ + G + A +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G ++ G P+ +TFT+LI G C G++S+ ++M A+G N TY +LIN LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 152 AGETKAALQLLRRIEELAVQP 172
A +LL ++ + P
Sbjct: 395 ENRLLKARELLGQLASKDIIP 415
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGI-TPNMVTSTILINCFCHLGRINFAFS 90
P I + ++ K N + + ++ + +P++VT T +I+ +C G++ A S
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+L ++L+ G +P +TF L+ G GE+ A MI+ G + VT+ LI+G C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 151 KAGETKAALQLLRRIEELAVQPNA 174
+ G+ +L + + PNA
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNA 382
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 19 VSSFLH-MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
SS L ML + P F ++ AK T + +M G P++VT T LI+
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 78 CFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF 137
+C +G+++ F + + RG PN T++ LI +C+ + KA + +K
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 138 NQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y +I+G CKAG+ A ++ +E+ +P+ +
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY--HPNTITFTTLIKGMCHNGEIS 121
G P++VT LI FC +N A + ++ K G P+ +T+T++I G C G++
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+A DDM+ G VT+ VL++G KAGE A ++ ++ P+ V
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ + L +M +G+ PN T +ILIN C+ R+ A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
LG + + P + +I G C G++++A ++M K + +++T+ +LI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A+ + ++ + P+ +
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKI 488
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ +L +N L Q+ K I P +I+ FC G++N A +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + K+ P+ ITFT LI G C G + +A+ M+A G +++T L++ L K
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 152 AGETKAALQL 161
AG K A L
Sbjct: 500 AGMAKEAYHL 509
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 32 PPITLFGEILGSLAKKNHC-FTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P L G ++ S A+K F L + E +G MV +++L N L R+ A
Sbjct: 136 PNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCC--MVVNSLL-NTLVKLDRVEDAMK 192
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ L+ +T TF LI+G+C G+ KA+ M G + + VTY LI G C
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC 252
Query: 151 KAGETKAALQLLRRIEELAV-QPNAV 175
K+ E A ++ + ++ +V P+ V
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVV 278
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+G ++ ++ + + +M+ ITP + T LI CH G+ A +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ G P+ TF ++I G C G + KA F+++ I F+ + T +L+NGLCK G T+
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 157 AALQLLRR-IEELAV 170
AL IEE V
Sbjct: 609 KALNFFNTLIEEREV 623
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + IL +++KK + L M+ G+ PN VT L+ +C LG + AF +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + + P+ T+ LI G+C+ G + + + D M + Q + VTY LI+G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G + A +L+ ++E V+ N V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQV 381
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSR--QMEFKGITPNMVT 71
K + + + M + P ++ F ++G L +H T +++ + ++ G+ P+ T
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLC--HHGKTELAMEKFDELAESGLLPDDST 558
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
+I +C GR+ AF +K + P+ T L+ G+C G KA++F + +I
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ + + VTY +I+ CK + K A LL +EE ++P+
Sbjct: 619 EER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 61 EFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEI 120
EFK + P+ VT ++ GR++ +L ++ K G PN +T+ L+ G C G +
Sbjct: 233 EFK-VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 121 SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+A + M + TY +LINGLC AG + L+L+ ++ L +QP+ V
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV 346
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 69/142 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ + K + + R+M KGI N +T +++ C +++ A ++
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + KRG+ + +T+ TLI G ++ KA+ D+M T+ LI GLC
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+T+ A++ + E + P+
Sbjct: 534 HGKTELAMEKFDELAESGLLPD 555
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 40/194 (20%)
Query: 20 SSFLH-MLHMNPPPPITLFGEILGSLAK--KNH--------------------CFTV--- 53
+S LH LH++PPP LF L + K H C T+
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175
Query: 54 ---------ISLSRQ----MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKR-G 99
IS +R+ M G++ N+ T +L+N +C G++ A +L ++
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+P+ +T+ T++K M G +S DM G N+VTY L+ G CK G K A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 160 QLLRRIEELAVQPN 173
Q++ +++ V P+
Sbjct: 296 QIVELMKQTNVLPD 309
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 63/113 (55%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
++ G +P++VT LI + +G ++ A ++ + ++G NTIT T++ +C +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ +A + + +GF ++VTYG LI G + + + AL++ ++++ + P
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCH---NGEISKA 123
P+ I ++ + H G+ + A + +++ PN +T TL+ G+ + IS A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRR-IEELAVQPNAV 175
DDM+ G N T+ VL+NG C G+ + AL +L R + E V P+ V
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
LGSL + F ++ L +Q + P++ T ILIN C+ G + ++ +
Sbjct: 288 LGSLKE---AFQIVELMKQTN---VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
P+ +T+ TLI G G +A + M G + NQVT+ + + LCK + +A
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA--- 398
Query: 161 LLRRIEEL 168
+ R+++EL
Sbjct: 399 VTRKVKEL 406
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSL-AKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
+ +S+F ML N P IL L + + + L + G+ PN + +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
L+ FC ++ A+ + G +L+R P+ ++ LI+G C G+++ AM DDM+ KG
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 135 FQFNQVTYGVLINGLCKAG 153
F V LI GLC G
Sbjct: 256 F----VPDRTLIGGLCDQG 270
Score = 60.1 bits (144), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M + + P++ + ILI FC G++N A +L ++L +G+ P+ TLI G+C G
Sbjct: 215 KMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQG 270
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
+ + ++MI+KGF + L+ G C G+ + A
Sbjct: 271 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
H G + AF + + G PNT ++ L++ C N ++S A M+ + +
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 141 TYGVLINGLCKAGETKAALQLL 162
+Y +LI G C+ G+ A++LL
Sbjct: 227 SYKILIQGFCRKGQVNGAMELL 248
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG-YHPNTITFTTLIKGMCHNGEIS 121
K + PN + + I C G++ A + ++L + P+ T+T LI G G+I+
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KA D+M KG N VTY LI GLCK G A +LL ++ + + PNA+
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 48 NHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITF 107
N FT L +M KGI PN+VT LI C LG ++ A +L + ++G PN IT+
Sbjct: 772 NKAFT---LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 108 TTLIKGMCHNGEISKAMHFHDDMIAKGF 135
TLI G+ +G +++AM + MI KG
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P+ T TILI+ G IN AF++ + +G PN +T+ LIKG+C G + +A
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ KG N +TY LI+GL K+G A++L ++ E
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R M +G++ N+VT T LI +C G + A V + ++ + + L+ G C
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRT 344
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G+I A+ HD+MI G + N LING CK+G+ A Q+ R+ + +++P+
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ N+VT LIN + +G + VL + +RG N +T+T+LIKG C G + +A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
H + + K +Q YGVL++G C+ G+ + A+++ + E+ V+ N
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN 365
Score = 63.2 bits (152), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 66/119 (55%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ L QM K + P ++T IL+ + +G + S+ +LKRG + + I+ +TL++
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ G+ ++AM ++++A+G + +T V+I+GLCK + A ++L + +P
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+L++ +C G+I A V N+++ G NT +LI G C +G++ +A M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + TY L++G C+AG AL+L ++ + V P +
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 35 TLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGN 94
T+F IL A+K + + M G P++++ L++ G A V
Sbjct: 156 TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK-GFQFNQVTYGVLINGLCKAG 153
++ P+ T + ++ C +G + KAM F + + G + N VTY LING G
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ + ++LR + E V N V
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVV 297
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
++G ++ + + + M G+ N LIN +C G++ A + +
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
P+ T+ TL+ G C G + +A+ D M K +TY +L+ G + G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 156 KAALQLLRRIEELAVQPNAV 175
L L + + + V + +
Sbjct: 453 HDVLSLWKMMLKRGVNADEI 472
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ L K +H + + + KG + + + +++ C GR++ A +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 92 LGNILKRGY-HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ +L +G+ P+ +T+T ++ G C GE+ KA M G + N V+Y L+NG+C
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
+ G++ A +++ EE PN++
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSI 525
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 27 HMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRIN 86
H P IT + I+ L ++ + R+M KG P V +L+ C GR +
Sbjct: 518 HWWSPNSIT-YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 576
Query: 87 FAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLI 146
A + L +G N + FTT+I G C N E+ A+ DDM + TY L+
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636
Query: 147 NGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ L K G A +L++++ + P V
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPV 665
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQM-EFKGITPNMVT 71
H+ + + M P + I+G L K+ V L ++M + G+ P+ VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
LI+ + A L + ++G+ + + ++ ++ +C G +S+A ++M+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 132 AKGF-QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+KG + VTY ++NG C+ GE A +LL+ + +PN V
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 62/132 (46%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
PP + + ++ + L + M G PN V+ T L+N C G+ A
Sbjct: 451 PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
++ + + PN+IT++ ++ G+ G++S+A +M+ KGF V +L+ LC
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 151 KAGETKAALQLL 162
+ G T A + +
Sbjct: 571 RDGRTHEARKFM 582
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 22 FLHMLHMNPPPPITL-FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
L ++H + P T+ + +L + + + E +PN +T +++++
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 535
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
G+++ A V+ ++ +G+ P + L++ +C +G +A F ++ + KG N V
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 595
Query: 141 TYGVLINGLCKAGETKAALQLL 162
+ +I+G C+ E AAL +L
Sbjct: 596 NFTTVIHGFCQNDELDAALSVL 617
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
F ++ S ++ + + M+ G+ PN++ I+ F R+ A L +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
G PN +T+ +I+G C + +A+ +DM +KG ++V+Y ++ LCK
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 157 AALQLLRRI-EELAVQPNAV 175
L++++ +E + P+ V
Sbjct: 365 EVRDLMKKMAKEHGLVPDQV 384
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + + + N + +M+ GI PN+VT +I +C L R+ A +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK-GFQFNQVTYGVLINGLC 150
L ++ +G P+ +++ T++ +C I + M + G +QVTY LI+ L
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 151 KAGETKAALQLLRRIEE 167
K AL L+ +E
Sbjct: 395 KHDHADEALWFLKDAQE 411
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P P+ + +L SL + + KG N+V T +I+ FC ++ A S
Sbjct: 557 PGPVEI-NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
VL ++ H + T+TTL+ + G I++A M+ KG VTY +I+ C
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675
Query: 151 KAGETKAALQLLRRI 165
+ G+ + +L ++
Sbjct: 676 QMGKVDDLVAILEKM 690
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 72/152 (47%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + S M+ P + + ++L L + L +M+ G+ ++ T T
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I+++ FC G I A + + G PN +T+T LI ++S A + M+++
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
G N VTY LI+G CKAG+ + A Q+ R+
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 67.0 bits (162), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
LS+ +E PN+V T +I+ C +G+ + A+ ++ + ++G PN +T+T +I G
Sbjct: 732 LSKMLE-NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
G+I + + M +KG N VTY VLI+ CK G A LL +++
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 66/144 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++ ++ L K + +M G + T + LI+ + + R + A V
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +L+ PN + +T +I G+C G+ +A M KG Q N VTY +I+G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+ + L+LL R+ V PN V
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYV 815
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M G+ N + + C C G+ AFSV+ ++ +G+ P+T T++ ++ +C+
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ A ++M G + TY ++++ CKAG + A + + E+ PN V
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 35/144 (24%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN+VT L++ FC R+ A +L + G PN I + LI G+C G++ +A
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 127 HDDMIAKGFQF-----------------------------------NQVTYGVLINGLCK 151
+M GF N V Y +I+GLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G+T A +L++ +EE QPN V
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVV 780
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML + P + ++ E++ L K L + ME KG PN+VT T +I+ F +G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I +L + +G PN +T+ LI C NG + A + ++M + + Y
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQP 172
+I G K E +L LL I + P
Sbjct: 855 VIEGFNK--EFIESLGLLDEIGQDDTAP 880
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
++ F L S K F+VI R+M +G P+ T + ++N C+ ++ AF +
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVI---REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ + G + T+T ++ C G I +A + ++M G N VTY LI+ KA
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ A +L + PN V
Sbjct: 568 KVSYANELFETMLSEGCLPNIV 589
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 32 PPITLFGEIL-GSLAKKN--HCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFA 88
P + + +L G L KK C V+++ M +G P+ L++ +C G ++A
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391
Query: 89 FSVLGNILKRGYHPNTITFTTLIKGMCHNGE------ISKAMHFHDDMIAKGFQFNQVTY 142
+ +L ++K G+ P + + LI +C + + + A + +M+A G N++
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 143 GVLINGLCKAGETKAALQLLRRI 165
LC AG+ + A ++R +
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREM 474
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 40 ILGSLAKKNH---CFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
++ AK NH F L R F P++ +L+ R+ F + +++
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRS-RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
G P T TF LI+ +C + + A D+M KG + N+ T+G+L+ G CKAG T
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 157 AALQLLRRIEELAVQPNAV 175
L+LL +E V PN V
Sbjct: 200 KGLELLNAMESFGVLPNKV 218
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
++ N P + + +L L K +L +M + + P+ V I I+ FC G+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ AF VL ++ K+G H + T+ +LI G+ +I + D+M KG N TY
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
I LC+ + + A LL + + + PN
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + L+ +L S K+ V L + M GI P T +LI C ++ A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++G PN TF L++G C G K + + M + G N+V Y +++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G + +++ ++ E + P+ V
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIV 253
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 68/132 (51%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ L K ++ M+ G+ P+ VT L++ +C +G+++ A S+
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +++ PN T L+ + G IS+A M KG+ + VT ++++GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 152 AGETKAALQLLR 163
+GE A+++++
Sbjct: 479 SGELDKAIEIVK 490
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
+QM KGI P++ + IL++ C LG ++ A +++G + + G P+ +T+ L+ G C
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
G++ A +M+ N T +L++ L K G A +LLR++ E
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
SL ++M PN T IL++ +GRI+ A +L + ++GY +T+T ++ G+
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Query: 115 CHNGEISKA------MHFH-----------------DDMIAKGFQFNQVTYGVLINGLCK 151
C +GE+ KA M H D +I + +TY L+NGLCK
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG A L + +QP++V
Sbjct: 537 AGRFAEAKNLFAEMMGEKLQPDSV 560
Score = 63.2 bits (152), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D S M+ N P +L SL K L R+M KG + VT
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 74 ILINCFCHLGRINFAFSV--------------LGN---------ILKRGYHPNTITFTTL 110
I+++ C G ++ A + LGN +++ P+ IT++TL
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 111 IKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ G+C G ++A + +M+ + Q + V Y + I+ CK G+ +A ++L+ +E+
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
ILG L KN F + L +M+ KGI+PN+ T I C ++ A ++L ++++
Sbjct: 601 ILG-LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
PN +F LI+ C + A + ++ Q + Y ++ N L AG+ A
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQ-KEGLYSLMFNELLAAGQLLKAT 718
Query: 160 QLLRRI 165
+LL +
Sbjct: 719 ELLEAV 724
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 48/108 (44%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M KG PN T IL+ +C G + +L + G PN + + T++ C G
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
+ + M +G + VT+ I+ LCK G+ A ++ +E
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 83 GRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTY 142
G+ A +VL + +G P+ ++ L+ G+C G +S A M G + VTY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 143 GVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
G L++G C G+ AA LL+ + PNA
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQME---FKGIT-PNMVTSTILINCFCHLGRINF 87
P I F + +L K+ + ME + G+ PN +T +++ FC +G +
Sbjct: 250 PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLED 309
Query: 88 AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
A ++ +I + + ++ ++G+ +G+ +A M KG + +Y +L++
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 148 GLCKAGETKAALQLLRRIEELAVQPNAV 175
GLCK G A ++ ++ V P+AV
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVCPDAV 397
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D M+ P + + +L LA N ++L M G+ P ++ T
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ G++ + +K G P+ + +T +I G GE+ KA +M K
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G N TY +I G C AG+ K A LL+ +E PN V
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFV 433
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
HM + P + F ++ L++ + G TP++V T++I + G
Sbjct: 317 HMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGG 376
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A + + ++G PN T+ ++I+G C G+ +A +M ++G N V Y
Sbjct: 377 ELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYS 436
Query: 144 VLINGLCKAGETKAALQLLRRIEE 167
L+N L AG+ A ++++ + E
Sbjct: 437 TLVNNLKNAGKVLEAHEVVKDMVE 460
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%)
Query: 15 ADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
A + V F+ N P + IL SL + + QM G TP+++T I
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
++ LG+ + + +L ++K G+ P+ T+ L+ + + A++ + M G
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + + LI+GL +AG+ +A + ++ P+ V
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 42 GSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYH 101
G L K F ++M KG PN+ T +I FC G+ A ++L + RG +
Sbjct: 376 GELEKAEEMF------KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 102 PNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
PN + ++TL+ + + G++ +A DM+ KG
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 17 NTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGIT--PNMVTSTI 74
+++F M + P + + I+ +L + + L QM+ G P+ T TI
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 75 LINCFCHLG-----------RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
LI+ +C G R+ A + +L RG+ P+ +T+ LI G C I +A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA 169
+ +DM KG NQVTY I E + A++++R +++L
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRG--YHPNTITFTTLIKGMCHNG------ 118
P++ +IN C +G A +L + G Y P+T T+T LI C G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 119 -----EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +A +M+ +GF + VTY LI+G CK AL+L ++ PN
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 174 AV 175
V
Sbjct: 318 QV 319
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 44 LAKKNHCFTVISLSRQMEFKGITPNMVTS---TILINCFCHLGRINFAFSVLGNILKRGY 100
LAK N + RQ+ + N+VT+ T L+ C G + A + + +
Sbjct: 137 LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHC 196
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF--NQVTYGVLINGLCKAGETKAA 158
P+ + T+I +C G KA D M GF++ + TY +LI+ C+ G
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 159 LQLLRR 164
+ +RR
Sbjct: 257 RKAIRR 262
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 20 SSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
S F+HM+ P + ++ ++ K + + L +ME ++P++ T TILIN
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQ 139
C ++ A + + P++ T+ +LI G C + +A+ +M A G + N
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 140 VTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+T+ LI+G C + KAA+ L + + P+ V
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M + P + ++ + L + N + M+ G+ PN+ T + +I+ +C G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A+ + IL PN + F TL+ G C E+ A M+ G N Y
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPNA 174
LI+G CK+G A+ LL +E L + P+
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M +N P + + ++ L ++ L ++M+ + I P+ T LI+ +C
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ A + + G PN ITF+TLI G C+ +I AM + +M KG + VTY
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+ K K AL+L + E + PN
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F ++ + L +M KGI P++VT T LI+ + A +
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++L+ G HPN TF L+ G G +S A+ F+ + + +N V + LI GLC+
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G A + + + P+
Sbjct: 562 NGYILRASRFFSDMRSCGITPD 583
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +FG ++ K T SL M G+ PN+ LI+ C G + A +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + P+ T+T LI G+C ++++A M + + TY LI+G CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ AL L + V+PN +
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNII 445
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 61/133 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ K+ + + L +M G+ PN++T + LI+ +C++ I A +
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G P+ +T+T LI + +A+ + DM+ G N T+ L++G K
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 152 AGETKAALQLLRR 164
G A+ +
Sbjct: 527 EGRLSVAIDFYQE 539
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ K + L +++ + PN+V L++ FC + A S+
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++K G PN + LI G C +G + +A+ +M + + TY +LINGLC
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
+ A +L ++++ + P++
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSS 409
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%)
Query: 27 HMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRIN 86
M P IL L ++ +V + M +G+ P++ +L C G +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 87 FAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLI 146
+L + G PN +T I +C + ++ +A + M G N TY +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 147 NGLCKAGETKAALQLLRRIEELAVQPNAV 175
+G CK G + A L + I + PN V
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVV 305
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 75/158 (47%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ V ++M+ P I ++ +L + + +I + KG + + +++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ C GR+ +++ L + K G P+ + LI+ C I A D+M +G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ N TY VLI L + GE + +L+L ++ E ++P+
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P ++L+ ++ + K L +M +G N+ T +LI G + +
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVL---ING 148
+L+RG P+ + +LI+G+C +I AM + + + VT VL +
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHK--TVTRRVLSEFVLN 547
Query: 149 LCKAGETKAALQLLRRIEEL 168
LC G + A QLLR E L
Sbjct: 548 LCSNGHSGEASQLLREREHL 567
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 77/154 (50%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M P P I + ++ S + I++ ++E P++++ LINC
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G ++ A + ++G +P+ +T++TL++ + A ++M+ KG Q N VT
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y +L++ L K G T A+ L ++++ + P+++
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D ++ F + + P I + ++ L K ++M+ KG+ P++VT +
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+ CF R+ A+S+ +L +G PN +T+ L+ + NG ++A+ + M +
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Query: 134 GFQFNQVTYGVL 145
G + +TY VL
Sbjct: 612 GLTPDSITYTVL 623
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
++ + +L K + L +M+ G +P++ T ILI F +G ++ A ++ +
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
+ P+ I++ +LI + NG++ +A +M KG + VTY L+ K
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 156 KAALQLLRRIEELAVQPNAV 175
+ A L + QPN V
Sbjct: 564 EMAYSLFEEMLVKGCQPNIV 583
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 64/130 (49%)
Query: 29 NPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFA 88
N P I + ++ S K + + + ++M K + + V ++I C G + A
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 89 FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
+ + +++KRG +P+ T+ TLI +C G+ +A H M G +Q++Y V+I G
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 149 LCKAGETKAA 158
LC G+ A
Sbjct: 380 LCIHGDVNRA 389
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + L+ ++ + + +S+ M G+ PN+ T+ LI+ + GR+ A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ HP+T T+ L+ C G + A +D+M+ +G Q + +TY L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 152 AGETKAALQLLRRIEELAV 170
G K A LL RI+ +
Sbjct: 523 KGRLKKAESLLSRIQATGI 541
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 64/120 (53%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+++ I+ L + + L ++M + G+ P ++T L+N C G I A ++
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ + G PN +++ TLIKG+C + KA++ + M G + N+VT ++++ LC+ G
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 71/149 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M N P ++ I+ L + M +G+ P++ T LI+ C G+
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A + G + G P+ I++ +I+G+C +G++++A F M+ + + V
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
+I+G + G+T +AL +L + V+PN
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
+ +M I P+ T +L+ C LG + AF + +L+RG P+ IT+T L++G+C
Sbjct: 462 VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVL 145
G + KA + A G + V + +L
Sbjct: 522 WKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 39/188 (20%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M++ P + +L L K + L R+M G +PN V+ LI C +
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCH---------------------------- 116
++ A + + K G PN +T ++ +C
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIV 266
Query: 117 -----------NGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
NG + +A+ +M K + V Y V+I GLC +G AA + +
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 166 EELAVQPN 173
+ V P+
Sbjct: 327 VKRGVNPD 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C G+++ A + ++ G P IT L+ G+C G I KA +M G N
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
V+Y LI GLC AL L + + ++PN V
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 47/109 (43%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P ++ ++I+ + G + A SVL +L G PN T LI G G + A
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++M + + TY +L+ C G + A QL + QP+ +
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D V FL+M + F IL L K L R + + + + VT
Sbjct: 141 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYN 199
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+++N +C + R A VL +++RG +PN T+ T++KG G+I A F +M +
Sbjct: 200 VILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ + VTY +++G AGE K A + + V P+
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +T + +L + +M+ + ++VT T +++ F G I A +V
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++ G P+ T+ +I+ +C + A+ ++M+ +G++ N TY VLI GL
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AGE +L++R+E +PN
Sbjct: 348 AGEFSRGEELMQRMENEGCEPN 369
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 53 VISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
+ + ++M +GI PN+ T ++ F G+I A+ + KR + +T+TT++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G GEI +A + D+MI +G + TY +I LCK + A+ + + +P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 173 N 173
N
Sbjct: 334 N 334
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M +G+ P++ T +I C + A + +++RGY PN T+ LI+G+ H G
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
E S+ M +G + N TY ++I + E + AL L ++ PN
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M+ P + + ++ L KK++ + + +M +G PN+ T +LI H
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G + ++ + G PN T+ +I+ E+ KA+ + M + N T
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDT 407
Query: 142 YGVLINGL 149
Y +LI+G+
Sbjct: 408 YNILISGM 415
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + +L + + V SL E G+ PN+ T +LI C A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + K G+ P+ +++T+I + G++ A+ D+M +G + Y +LI+G K
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 152 AGETKAALQLLRR-IEELAVQPN 173
+ K A++L R +E+ +V PN
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPN 254
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEIL-GSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
K D+ + F M P +T + ++ G L +K+H + R +E + PN+ T
Sbjct: 199 KLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH 258
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
I+I+ GR++ + + + + T+++LI G+C G + KA +++
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
+ + VTY ++ G C+ G+ K +L+L R +E
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
S+ +++ + + ++VT ++ FC G+I + L I++ N +++ LIKG+
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGL 369
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
NG+I +A M AKG+ ++ TYG+ I+GLC G AL +++ +E
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Score = 63.2 bits (152), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 66/136 (48%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
++G L + + R+M G P +V+ ILI C G+ A + + +L+ G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ P+ T++ L+ G+C + +I A+ + G + + + + +LI+GLC G+ A+
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 160 QLLRRIEELAVQPNAV 175
++ +E N V
Sbjct: 590 TVMANMEHRNCTANLV 605
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
L S+ K + TV++ ME + T N+VT L+ F +G N A + G + K G
Sbjct: 579 LCSVGKLDDAMTVMA---NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
P+ I++ T++KG+C +S AM F DD G T+ +L+ +
Sbjct: 636 QPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 65/144 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K + ++M G P++ T +IL+ C +I+ A +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L+ G + + LI G+C G++ AM +M + N VTY L+ G K
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G++ A + + ++ +QP+ +
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDII 640
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ I+ L KK +L ++M G+ N LI R+ A L +
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K G P +++ LI G+C G+ +A F +M+ G++ + TY +L+ GLC+ +
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 157 AALQL 161
AL+L
Sbjct: 552 LALEL 556
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + +LG + + L R ME K + N+V+ ILI G+I+ A +
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ +GY + T+ I G+C NG ++KA+ ++ + G + Y +I+ LCK
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 154 ETKAALQLLRRIEELAVQPNA 174
+ A L++ + + V+ N+
Sbjct: 444 RLEEASNLVKEMSKHGVELNS 464
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 20 SSFL-HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINC 78
S+F+ ML P + + +L L + + L Q G+ +++ ILI+
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
C +G+++ A +V+ N+ R N +T+ TL++G G+ ++A M G Q +
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 139 QVTYGVLINGLCKAGETKAALQLL 162
++Y ++ GLC A++
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFF 662
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%)
Query: 35 TLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGN 94
T +G + L + + + +++E G ++ +I+C C R+ A +++
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
+ K G N+ LI G+ + + +A F +M G + V+Y +LI GLCKAG+
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 155 TKAALQLLRRIEELAVQPN 173
A ++ + E +P+
Sbjct: 515 FGEASAFVKEMLENGWKPD 533
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ LAK + L +M +G+ P++ ILI+ F A +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 92 LGNILK-RGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+L+ +PN T +I G+ G + + + M + + TY LI+GLC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 151 KAGETKAALQLLRRIEE 167
AG A + ++E
Sbjct: 302 DAGNVDKAESVFNELDE 318
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ +ML N P I L+ ++ L+K + L M KGI+P+ +I C
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G + S+ + + P+ T T LI MC NG + +A ++ G + T
Sbjct: 386 RGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVAT 445
Query: 142 YGVLINGLCKAGETKAALQLLRRIE 166
+ LI+GLCK+GE K A LL ++E
Sbjct: 446 FNALIDGLCKSGELKEARLLLHKME 470
Score = 67.0 bits (162), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML N P + FG ++ L KK + M +GI+PN VT TILI+ C G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEI------------------------ 120
+ A + + G +P+++ L+ G C G +
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 121 -----------SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA 169
++A + +M+ K + + + Y +LI GL KAG+ + AL+LL +
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 170 VQPN 173
+ P+
Sbjct: 369 ISPD 372
Score = 63.2 bits (152), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 42 GSLAKKNHCFTVI---------------SLSRQMEFKGITPNMVTSTILINCFCHLGRIN 86
G ++ ++CF V+ S R EF P++ T +++ +
Sbjct: 121 GGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD-CRPDVFTYNVILRVMMR-EEVF 178
Query: 87 F--AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
F AF+V +LK PN TF L+ G+ G S A DDM +G N+VTY +
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
LI+GLC+ G A +L ++ P++V
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSV 269
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 60/137 (43%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L + L M K I P+++ TILI G+I A +L ++
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+G P+T + +IK +C G + + +M + T+ +LI +C+ G +
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 157 AALQLLRRIEELAVQPN 173
A ++ IE+ P+
Sbjct: 426 EAEEIFTEIEKSGCSPS 442
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 83 GRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTY 142
G I A+ L + G P+ +++ LI G C G+I A+ + + KG + VTY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 143 GVLINGLCKAGETKAALQLLRRIEELAVQP 172
LINGL + G + A +L ++ P
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSP 585
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG---EI 120
G +P++V+ +LIN FC G I+ A +L + +G P+++T+ TLI G+ G E
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 121 SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
K + DD F+ + Y L+ C+ + A L
Sbjct: 572 FKLFYAKDD-----FRHSPAVYRSLMTWSCRKRKVLVAFNL 607
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + M P +T + ++ AK V+ L +M G++P+M + L
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 76 INCFCHLGRINFAFSVL-GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
++C+ LGR AF +L +I G P T+ L+ +C +G A+ + ++
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +TY +LINGLCK+ + ++R +++ PNAV
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + +L +L K H I L + ++ + + P ++T ILIN C R+ +
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWM 210
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + K GY PN +T+TT++K I K + M +G+ F+ +++ L K
Sbjct: 211 MRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK 270
Query: 152 AGETKAALQLLRRI 165
G + A + + +
Sbjct: 271 TGRAEEAYECMHEL 284
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + +L K + V L ++E KG+ P+ T TI++N ++G A L
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
I + G P+ +T LI G+C G + +AM M + ++ TY +++ LCK G
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
Query: 154 ETKAALQLL 162
A +LL
Sbjct: 410 RLVCASKLL 418
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 2/159 (1%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN + F H L P + + ++ L K +V + R+++ G TPN VT T +
Sbjct: 171 DNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ + RI + + K GY + ++ + G +A +++ G
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 136 QFNQ-VTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ V+Y L+N K G A LL IE ++P+
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ I+GSL K+ +M GI P+ + I+IN + GRI+ A +
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++K P++ T+T LI G G + K + D M+ G N V Y LI K
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Query: 152 AGETKAALQLL 162
G+ K + L
Sbjct: 700 KGDFKFSFTLF 710
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 33 PITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVL 92
P+ LG+ K+ VI + K I PN+ +I +C GR++ A++ L
Sbjct: 762 PLVSIPSSLGNYGSKSFAMEVIGKVK----KSIIPNLYLHNTIITGYCAAGRLDEAYNHL 817
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
++ K G PN +T+T L+K G+I A+ + + +QV Y L+ GLC
Sbjct: 818 ESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDF 874
Query: 153 GETKAALQLLRRIEELAVQPN 173
AL L+ +++ + PN
Sbjct: 875 KRPLDALALMLEMQKSGINPN 895
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L KKN ++ ME G+ P + + +I GR+ A
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P+ I + +I NG I +A ++++ + + TY VLI+G K
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G + Q L ++ E + PN V
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVV 688
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 55/132 (41%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P P+ L+ + K+ +L ME G + V T L+ +C + A
Sbjct: 234 PLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMR 293
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ +++R + + F TLI G G + K MI KG Q N TY ++I C
Sbjct: 294 LYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYC 353
Query: 151 KAGETKAALQLL 162
K G AL+L
Sbjct: 354 KEGNVDYALRLF 365
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M+ +GI PN+VT TIL+ G I A + P+ + ++TL+KG+C
Sbjct: 820 MQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKR 876
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A+ +M G N+ +Y L+ LC + T A+++++ + L + P ++
Sbjct: 877 PLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSI 932
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSV-LGNILKRGYHPNTITFTTLIKGMCHN 117
QM KG+ N+ T I+I +C G +++A + + N N +T LI G
Sbjct: 332 QMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKK 391
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
G + KA+ M+ G + +TY VL+ L K E K A+ +L+ I
Sbjct: 392 GGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI 439
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P P + + ++ L ++N + SL ++ P++ T I++N C + AF+
Sbjct: 510 PLPFS-YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
++ + + G P ++++I + G + +A M+ G Q +++ Y ++IN
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 151 KAGETKAALQLLRRIEELAVQPNA 174
+ G A +L+ + + ++P++
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSS 652
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 28 MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINF 87
+ PP F +L L + + L +M+ I P++VT ILIN C R++
Sbjct: 292 LEAPP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347
Query: 88 AFSVL----------GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IAKGFQ 136
A V GN++K ++I F TLI G+C G + +A M + +
Sbjct: 348 ALEVFEKMRGKRTDDGNVIK----ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCA 403
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N VTY LI+G C+AG+ + A +++ R++E ++PN V
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN VT LI+ +C G++ A V+ + + PN +T T++ GMC + ++ A+ F
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
DM +G + N VTY LI+ C + A+ ++ E P+A
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ I PN+VT ++ C +N A ++ K G N +T+ TLI C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ KAM++++ M+ G + Y LI+GLC+ A++++ +++E
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P ++ ++ L + I + +++ G + +++ +LI FC
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ +L ++ K G P++IT+ TLI + + + M G TYG
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 145 LINGLCKAGETKAALQLLRRIE-ELAVQPNAV 175
+I+ C GE AL+L + + V PN V
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+G + + + + ME +G+ N+VT LI+ C + + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P+ + LI G+C A+ + + GF + + Y +LI C
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
T+ ++L +E+ +P+++
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSI 582
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P IT + ++ K +V + QM G+ P + T +I+ +C +G ++ A
Sbjct: 579 PDSIT-YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 91 VLGNI-LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+ ++ L +PNT+ + LI G +A+ ++M K + N TY L L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
+ + + L+L+ + E + +PN +
Sbjct: 698 NEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKG-ITPNMVTSTILINCFCHLGRINFAFS 90
P +T +G ++ + + L + M + PN V ILIN F LG A S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ + + PN T+ L K + + + D+M+ + + NQ+T +L+ L
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 151 KAGE 154
+ E
Sbjct: 734 GSDE 737
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
Query: 23 LHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKG------ITPNMVTSTILI 76
L M + P + G ++ +L K + + +M K I + + LI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLI 377
Query: 77 NCFCHLGRINFAFSVLGNI-LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ C +GR+ A +L + L+ PN +T+ LI G C G++ A M
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ N VT ++ G+C+ A+ +E+ V+ N V
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ + V ++I F G +N A ++ + G +P+ IT+T++I G C+ G+I A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA----VQPNAV 175
+M N VTY ++ G+CK+G+ + AL+LL +E+ + PNAV
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAV 275
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L ++M+ G+ P+++T T +IN +C+ G+I+ A+ + + K N++T++ +++G+C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 116 HNGEISKAMHFHDDMIAKG----FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
+G++ +A+ +M + N VTY ++I C+ + AL +L R+
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 172 PNAV 175
PN V
Sbjct: 307 PNRV 310
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKG----ITPNMVTSTILINCFCHLGRINFAFSVL 92
+ IL + K + L +ME + I+PN VT T++I FC R+ A VL
Sbjct: 238 YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+ RG PN +T LI+G+ N E KA+ D + K
Sbjct: 298 DRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVK 338
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ L R+M +G+ N VT T LI G + A + ++ G P+ +T+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 114 MCHNGEISKAM---HFHD------DMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRR 164
+C NG++ KA+ D + KG + N VTY +I+G CK G + A L R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 165 IEELAVQPNA 174
++E P++
Sbjct: 121 MKEDGPLPDS 130
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSR---------QMEFKGITPNMVTS 72
F M+ PP I + +L L K + + + KG+ PN+VT
Sbjct: 39 FKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTY 98
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T +I+ FC G A+++ + + G P++ T+ TLI+ +G+ + + +M +
Sbjct: 99 TTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLL 162
F + TYG++ + L K L++L
Sbjct: 159 CRFAGDASTYGLVTDMLHDGRLDKGFLEML 188
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH---------LGRINFAFS 90
++ L + C + ++M G+ P+++T IL++ C G++ +
Sbjct: 22 LIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWD 81
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ ++ +G PN +T+TT+I G C G +A M G + TY LI
Sbjct: 82 LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHL 141
Query: 151 KAGETKAALQLLRRIEELAVQPNA 174
+ G+ A+ +L++ + +A
Sbjct: 142 RDGDKAASAELIKEMRSCRFAGDA 165
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 28 MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINF 87
+ PP F +L L + + L +M+ I P++VT ILIN C R++
Sbjct: 292 LEAPP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347
Query: 88 AFSVL----------GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IAKGFQ 136
A V GN++K ++I F TLI G+C G + +A M + +
Sbjct: 348 ALEVFEQMRGKRTDDGNVIK----ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV 403
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N VTY LI+G C+AG+ + A +++ R++E ++PN V
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN VT LI+ +C G++ A V+ + + PN +T T++ GMC + ++ A+ F
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
DM +G + N VTY LI+ C + A+ ++ E P+A
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ I PN+VT ++ C +N A ++ K G N +T+ TLI C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ KAM++++ M+ G + Y LI+GLC+ A++++ +++E
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P ++ ++ L + I + +++ G + +++ +LI FC
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ +L ++ K G P++IT+ TLI + + + M G TYG
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 145 LINGLCKAGETKAALQLLRRIE-ELAVQPNAV 175
+I+ C GE AL+L + + V PN V
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P IT + ++ K +V + QM G+ P + T +I+ +C +G ++ A
Sbjct: 579 PDSIT-YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 91 VLGNI-LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+ ++ L +PNT+ + LI G +A+ ++M K + N TY L L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
+ + + L+L+ + E + +PN +
Sbjct: 698 NEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+G + + + + ME +G+ N+VT LI+ C + + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P+ + LI G+C A+ + + GF + + Y +LI C
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ ++L +E+ +P+++
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSI 582
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKG-ITPNMVTSTILINCFCHLGRINFAFS 90
P +T +G ++ + + L + M + PN V ILIN F LG A S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
+ + + PN T+ L K + + + D+M+ + + NQ+T +L+ L
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 151 KAGE 154
+ E
Sbjct: 734 GSDE 737
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
Query: 23 LHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKG------ITPNMVTSTILI 76
L M + P + G ++ +L K + + QM K I + + LI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 77 NCFCHLGRINFAFSVLGNI-LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ C +GR+ A +L + L+ PN +T+ LI G C G++ A M
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ N VT ++ G+C+ A+ +E+ V+ N V
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 28 MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINF 87
+ PP F +L L + + L +M+ I P++VT ILIN C R++
Sbjct: 292 LEAPP----FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347
Query: 88 AFSVL----------GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IAKGFQ 136
A V GN++K ++I F TLI G+C G + +A M + +
Sbjct: 348 ALEVFEQMRGKRTDDGNVIK----ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV 403
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N VTY LI+G C+AG+ + A +++ R++E ++PN V
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN VT LI+ +C G++ A V+ + + PN +T T++ GMC + ++ A+ F
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
DM +G + N VTY LI+ C + A+ ++ E P+A
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 56/109 (51%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ I PN+VT ++ C +N A ++ K G N +T+ TLI C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ KAM++++ M+ G + Y LI+GLC+ A++++ +++E
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
ML P ++ ++ L + I + +++ G + +++ +LI FC
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ +L ++ K G P++IT+ TLI + + + M G TYG
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 145 LINGLCKAGETKAALQLLRRIE-ELAVQPNAV 175
+I+ C GE AL+L + + V PN V
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++G KN+ V + ME +G P+ +T LI+ F ++ +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IAKGFQFNQVTYGVLINGLCKAGET 155
+ G P T+ +I C GE+ +A+ DM + N V Y +LIN K G
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 156 KAALQLLRRIEELAVQPN 173
AL L ++ V+PN
Sbjct: 669 GQALSLKEEMKMKMVRPN 686
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+G + + + + ME +G+ N+VT LI+ C + + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P+ + LI G+C A+ + + GF + + Y +LI C
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ ++L +E+ +P+++
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSI 582
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
Query: 23 LHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKG------ITPNMVTSTILI 76
L M + P + G ++ +L K + + QM K I + + LI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 77 NCFCHLGRINFAFSVLGNI-LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ C +GR+ A +L + L+ PN +T+ LI G C G++ A M
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ N VT ++ G+C+ A+ +E+ V+ N V
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%)
Query: 33 PITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVL 92
+ + ++ + + ++ L +M KG+ N+VT T LI F G + A +L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
+ + G P+ I +TT++ +C +G + KA +DMI + ++Y LI+GLC++
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 153 GETKAALQLLRRIEELAVQPNAV 175
G A++L ++ P+ +
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDEL 466
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F L L ++N + M +G P++V+ TILIN G++ A +
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF-HDDMIAKGFQFNQVTYGVLINGLC 150
+++ G P+ L+ G+CH ++ A +++ + + + V Y LI+G C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
KAG + A L + ++ +P+ V
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLV 256
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 14 KADNTVSS---FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMV 70
+A NT + F M + + ++ + ++ + L QM G++P+ +
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 71 TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM 130
T +++ C G ++ A+ V ++++ P+ I++ +LI G+C +G +++A+ +DM
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
K +++T+ +I GL + + AA ++ ++
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++ME +G ++V+ + LI FC A+ + + ++G N +T+T+LIK
Sbjct: 315 KEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G S A D M G +++ Y +++ LCK+G A + + E + P+A+
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 18 TVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILIN 77
V +F M+ P + + ++ L + + + M G++P+ L+
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 78 CFCHLGRINFAFSVLGNILKRG-YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
CH +++ A+ ++ +K +T+ + LI G C G I KA M G +
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 137 FNQVTYGVLIN 147
+ VTY VL+N
Sbjct: 253 PDLVTYNVLLN 263
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M + P + IL L K + + M ITP+ ++ LI+ C G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
R+ A + ++ + P+ +TF +I G+ ++S A D M+ KGF ++
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 144 VLINGLC 150
LI C
Sbjct: 505 TLIKASC 511
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 72/158 (45%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
DN V F M H + + +G L +++ ++ M+ G + T +
Sbjct: 26 DNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRF 85
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ C + + + ++L ++ G+ P+ F + +C ++ A+ M+ +G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ + V+Y +LINGL +AG+ A+++ + V P+
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 35/176 (19%)
Query: 35 TLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGN 94
++ ++ K +L M G P++VT +L+N + + A V+
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 95 ILKRGY------------------HPN-----------------TITFTTLIKGMCHNGE 119
+++ G HP+ ++++TLI+ C
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KA ++M KG N VTY LI + G + A +LL ++ EL + P+ +
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML N + + +L +L K + ++M G+ P+ + I I+ +C
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G ++ A+ VL + + PN TF +IK +C N ++ A D+MI KG + T
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
Y ++ C E A +LL R++ P+
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 69/153 (45%)
Query: 21 SFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
+F M+ P + ++L SL K H + + GI P+ T +IL+ +
Sbjct: 160 AFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA 219
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
+ + A V +L+R + + + L+ +C +G++ +M G + +
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAY 279
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ + I+ C AG+ +A ++L R++ + PN
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
+ +R +EF GI P + L++ C +N A G G P+ T++ L++G
Sbjct: 160 AFNRMVEF-GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ S A D+M+ + + + Y L++ LCK+G+ ++ + + L ++P+A
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQM-EFKGITPNMVTSTI 74
D+ + F M+ P FG ++ L K + + + M + G+ P +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
LI C +G ++FAF + + + ++TLI + G ++ ++M KG
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ + VTY VLING C ++++A ++L + E ++P+ +
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 35 TLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGN 94
++ ++ SL K V + +M KG P+ VT +LIN FC A VL
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
++++G P+ I++ ++ + +A + +DM +G + ++Y ++ +GLC+ +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 155 TKAALQLL 162
+ A +L
Sbjct: 379 FEEAAVIL 386
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P+ T ILI+ G + A + ++K+ P +TF TLI G+C + + +A+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 127 HDDMI-AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
DM+ G + Y LI LC+ GE A +L E ++ +A
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 17 NTVSSFLHMLHMNPPPPITL-FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
N VS L + P T+ + ++ +N + + +M KG+ P++++ ++
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ F + + A + ++ +RG P+T+++ + G+C + +A D+M+ KG+
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+ + + LC++G+ L++L ++
Sbjct: 395 KPRRDRLEGFLQKLCESGK----LEILSKV 420
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F+ M M P + + +L L K I L M KG PN +T
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L +C C + A +L ++ G P+ T+ T+I G+ NG++ +AM F M K
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KK 671
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLL 162
+ VT L+ G+ KA + A +++
Sbjct: 672 LVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
I L +M G P+++ LIN R++ A+ + + + P +T+ TL+ G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ NG+I +A+ + M+ KG N +T+ L + LCK E AL++L ++ ++ P+
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
FL + P + + +L + K + L ++M N +T I+I+
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 82 LGRINFAFSVLGNILK-RGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
G ++ A + +++ R + P T+ LI G+ +G + +A + M+ G + N
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
Y +LING KAGE AA L +R+ + V+P+
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 35/177 (19%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K+ +V+ L ++ME G+ PN+ T TI I G+IN A+ +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 92 LGNILKRGYHPNTITFTTLIKGMC-----------------------------------H 116
L + G P+ +T+T LI +C
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 117 NGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
N ++ F +M G + VT+ +L++ LCKAG A L + + + PN
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 63/135 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +G ++ L+K + L M G PN ILIN F G + A ++
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++K G P+ T++ L+ +C G + + +H+ ++ G + V Y ++INGL K
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 152 AGETKAALQLLRRIE 166
+ + AL L ++
Sbjct: 1009 SHRLEEALVLFNEMK 1023
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + M+ P + + ++ +L K + + +M+ + P +VT L
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
+ G+I A + ++++G PNTITF TL +C N E++ A+ M+ G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ TY +I GL K G+ K A+ ++++L V P+ V
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFV 678
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+ME G P++VT TIL++ C G AF L + +G PN T+ TLI G+
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ A+ +M + G + TY V I+ K+G++ +AL+ +++ + PN V
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML P ++ ++ K +L ++M +G+ P++ T ++L++C C
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM-IAKGFQFNQV 140
+GR++ + + G +P+ + + +I G+ + + +A+ ++M ++G +
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
TY LI L AG + A ++ I+ ++PN
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 72/163 (44%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
H+ D+ + F +M + P + + K + + +M+ KGI PN+V
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+ GR A + + G P+++T+ ++K GEI +A+ +M+
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + + + LIN L KA A ++ R++E+ ++P V
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++G L + + + Q++ G P++ T L++ + G+I+ F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA-KGFQFNQVTYGVLINGLC 150
+ NTIT +I G+ G + A+ + D+++ + F TYG LI+GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 151 KAGETKAALQLLRRIEELAVQPN 173
K+G A QL + + +PN
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPN 925
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M + +P T LI+ GR+ A + +L G PN + LI G GE
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A M+ +G + + TY VL++ LC G L + ++E + P+ V
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 62/144 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ +L K + M +GI PN+ T LI + R++ A +
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
GN+ G P T+ I +G+ A+ + M KG N V + L K
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG + A Q+ ++++ + P++V
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSV 504
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEF-KGITPNMVTS 72
+ D + F + P + + I+ L K + + L +M+ +GITP++ T
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
LI G + A + I + G PN TF LI+G +G+ A + M+
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 133 KGFQFNQVTYGVLIN 147
GF N TY L N
Sbjct: 1096 GGFSPNTGTYEQLPN 1110
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ PN V+ ILI F A V +L+ P+ +T+ +LI +C N ++ KA
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+DMI K + N VT+G+L+ GLC GE A +L+ +E +P V
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV 292
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ P++VT LI C + A S+L +++K+ PN +TF L+KG+C GE ++A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
DM +G + V YG+L++ L K G A LL +++ ++P+ V
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVV 327
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML M P + + ++G L + + SL M K I PN VT +L+ C
Sbjct: 209 FDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G N A ++ ++ RG P + + L+ + G I +A +M + + + V
Sbjct: 269 KGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVI 328
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Y +L+N LC A ++L ++ +PNA
Sbjct: 329 YNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P FG ++ L K L ME++G P +V IL++ GR
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I+ A +LG + KR P+ + + L+ +C + +A +M KG + N TY +
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 145 LINGLCKAGETKAALQLL 162
+I+G C+ + + L +L
Sbjct: 367 MIDGFCRIEDFDSGLNVL 384
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%)
Query: 23 LHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHL 82
M + P + +G ++ L K+ L +M+ + I P++V IL+N C
Sbjct: 280 FDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTE 339
Query: 83 GRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTY 142
R+ A+ VL + +G PN T+ +I G C + ++ + M+A T+
Sbjct: 340 CRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATF 399
Query: 143 GVLINGLCKAG 153
++ GL K G
Sbjct: 400 VCMVAGLIKGG 410
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%)
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
LIN G + A S PN+++F LIKG + A D+M+
Sbjct: 157 LINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
Q + VTY LI LC+ + A LL + + ++PNAV
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV 257
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ L + + +M+ KG PN T ++I+ FC + + +V
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
L +L + P TF ++ G+ G + A + M K F + L++ LC
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 21 SFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFC 80
SF L P + ++ ++ + + ++M+ GI PN+ T +I+I+ C
Sbjct: 242 SFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
G+I+ A V ++L G PN ITF L++ G K + ++ M G + + +
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
TY LI C+ + A+++L + + + NA
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA 395
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 15 ADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTI 74
A V F M P F ++ +L++K S ++ + P+++ T
Sbjct: 202 ASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTN 260
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
L+ +C G I+ A V + G PN T++ +I +C G+IS+A DM+ G
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
N +T+ L+ KAG T+ LQ+ ++++L +P+ +
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML P F ++ K V+ + QM+ G P+ +T LI C
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A VL ++K+ N TF T+ + + +++ A + M+ + N VT
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
Y +L+ + T L++ + +++ V+PN
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+G+L KK H T + L M G P+++T +I C G A
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ L+ G P IT+T L++ +C ++A+ +DM +G + VTY L+N C+
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G + +++ I ++ N V
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTV 315
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M N P ++ LA+ + + + R M G P+ +T ++I C G
Sbjct: 130 MARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGH 189
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
I A +L ++ G P+ IT+ T+I+ M G +A+ F D + G +TY V
Sbjct: 190 IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV 249
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQ 171
L+ +C+ + A+++L E++AV+
Sbjct: 250 LVELVCRYCGSARAIEVL---EDMAVE 273
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F ML P I + +LG+++K+ I L ++ P ++T +I+
Sbjct: 372 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 431
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G + A + +L G P+ IT +LI G C + +A + +G T
Sbjct: 432 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 491
Query: 142 YGVLINGLCKAGETKAALQLLR 163
Y ++I GLCK E + A++++
Sbjct: 492 YRLVIQGLCKKKEIEMAIEVVE 513
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
PP + + ++ LAKK + L QM GI P+ +T LI FC + A
Sbjct: 416 PPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQ 475
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
VL RG T+ +I+G+C EI A+ + M+ G + ++ Y ++ G+
Sbjct: 476 VLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVE 535
Query: 151 KAGETKAAL 159
+ G A+
Sbjct: 536 EMGMGSEAV 544
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
PP + + ++ + + I + G P M+T T+L+ C A
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
VL ++ G +P+ +T+ +L+ C G + + +++ G + N VTY L++ LC
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 13 HKADNTVSSFLHMLHMNP-PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVT 71
H+ + V L++++ P + + ++ L K I QM + P++VT
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT 386
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
++ G ++ A +LG + P IT+ ++I G+ G + KA+ + M+
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML 446
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQLLRR 164
G + +T LI G C+A + A Q+L+
Sbjct: 447 DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ ++ + V S+ + + G+ N VT L++ C + +
Sbjct: 277 PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + Y P IT+ LI G+C +S+A+ F M+ + + VTY ++ + K
Sbjct: 337 LNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A++LL ++ P +
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLI 420
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ +L SL + V + M P ++T ILIN C ++ A +L
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
++ P+ +T+ T++ M G + A+ + +TY +I+GL K G K
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 157 AALQLLRRIEELAVQPNAV 175
AL+L ++ + + P+ +
Sbjct: 437 KALELYHQMLDAGIFPDDI 455
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + + F M + P + +F ++ N V + ME G+ P++VT +
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+N + +G + + ++L+ G P+ F+ L KG GE KA + M
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
G + N V Y +I+G C AGE K A+Q+ +++
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
MLH P + G I+ ++ + +M+ G+ PN+ LI F ++
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ V+ + + G P+ +TF+TL+ G++ + + DM+ G + + +
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
L G +AGE + A Q+L ++ + V+PN V
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ PN T IL+ +C+ +I A++++ + G P+ +TF TL K G A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA- 514
Query: 125 HFHDDMIAKGFQFNQV-----TYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+DMI N+V T G ++NG C+ G+ + AL+ R++EL V PN
Sbjct: 515 ---EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 20 SSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCF 79
S F ++ P + + ++ +L ++ H +++SL ++E G+ P+ + +IN
Sbjct: 340 SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS 399
Query: 80 CHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA-KGFQFN 138
G ++ A + + + G P TF TLIKG G++ ++ D M+ + Q N
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
T +L+ C + + A ++ +++ V+P+ V
Sbjct: 460 DRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFS-VLGNILKRGYHPNTITFTTLIKGMCHN 117
+M+ G+ P++VT L + +G A ++ +L PN T T++ G C
Sbjct: 485 KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE 544
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G++ +A+ F M G N + LI G + +++ +EE V+P+ V
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVV 602
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 71 TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHD-- 128
+ T L+N GR A S+ +++ G+ P+ IT+TTL+ + ++ HFH
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTAL------TRQKHFHSLL 374
Query: 129 DMIAK----GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+I+K G + + + + +IN ++G A+++ +++E +P A
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTA 424
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P FG ++ K+ V + R M+ G+ + T I+I C C + A ++
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++ PN++T++ LI G C + +AM+ + M+ G++ + Y LI+ LCK
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Query: 152 AGETKAALQLLR 163
G+ + AL L R
Sbjct: 335 GGDFETALILCR 346
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFK-GITPNMVTSTILINCFCHLGRINFAF 89
PP + +L L K V +M + P++V+ TILI+ C+ + A
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 90 SVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
++ + G+ P+ + T++KG C + S+A+ + M +G + +Q+TY LI GL
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 150 CKAGETKAALQLLRRIEELAVQPNAV 175
KAG + A L+ + + +P+
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTA 336
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ ++ + + L ++ G P+ ++ FC L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G P+ IT+ TLI G+ G + +A + M+ G++ + TY L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 152 AG 153
G
Sbjct: 348 KG 349
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P+ VT+ I + C GR++ A ++ + ++ P+T T+ L+K +C ++
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 124 MHFHDDMIAK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
F D+M + + V++ +LI+ +C + + A+ L+ ++ +P+
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I ++ L ++ ++ +++ G+ P+ V T +I+ +C+LGR + AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G +LK G P+ T T LI G IS A +M +G + + VTY L++G K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ +L+ + + P+
Sbjct: 491 THQLNKVFELIDEMRSAGISPD 512
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 70/142 (49%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + ++ K + V L +M GI+P++ T ILI+ G I+ A ++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+++RG+ P+T+ FT +I G G+ +A M + + VT L++G CKA
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ A+ L ++ + ++P+ V
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVV 619
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F +++G +K+ L M + P++VT + L++ +C R+ A +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+L G P+ + + TLI G C G+I KA M+ +G N+ T+ L+ GL
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M H P I F + L K S+ +++ GI+ + V+ + +I+ FC
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+G+ A ++ + R PN +++ + +C G++ +A ++ G + V
Sbjct: 354 VGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 142 YGVLINGLCKAGETKAALQ 160
Y +I+G C G T A Q
Sbjct: 411 YTTMIDGYCNLGRTDKAFQ 429
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G P++ TSTILI G I+ A SV N+ G + +T+ L+ G +++K
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
D+M + G + TY +LI+ + G A +++ + P+ +
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I ++ L ++ ++ +++ G+ P+ V T +I+ +C+LGR + AF
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G +LK G P+ T T LI G IS A +M +G + + VTY L++G K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ +L+ + + P+
Sbjct: 491 THQLNKVFELIDEMRSAGISPD 512
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 70/142 (49%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + ++ K + V L +M GI+P++ T ILI+ G I+ A ++
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+++RG+ P+T+ FT +I G G+ +A M + + VT L++G CKA
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ A+ L ++ + ++P+ V
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVV 619
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F +++G +K+ L M + P++VT + L++ +C R+ A +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+L G P+ + + TLI G C G+I KA M+ +G N+ T+ L+ GL
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M H P I F + L K S+ +++ GI+ + V+ + +I+ FC
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+G+ A ++ + R PN +++ + +C G++ +A ++ G + V
Sbjct: 354 VGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 142 YGVLINGLCKAGETKAALQ 160
Y +I+G C G T A Q
Sbjct: 411 YTTMIDGYCNLGRTDKAFQ 429
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G P++ TSTILI G I+ A SV N+ G + +T+ L+ G +++K
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
D+M + G + TY +LI+ + G A +++ + P+ +
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTL 549
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ + ILI C G + A +L ++ PN +TF+ LI+G C+ G+ +A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ M + + + +T+ +LI+GL K G + + LL R++ +PN
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN++T + LI FC+ G+ AF +L + K P+TITF LI G+ G + + +
Sbjct: 235 PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL 294
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ M KG + N TY ++ GL A +++ ++ ++P+
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K G + LIKG+C +G + A+ D+ + + N +T+ LI G C G+ +
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 157 AALQLLRRIEELAVQPNAV 175
A +LL R+E+ ++P+ +
Sbjct: 255 EAFKLLERMEKERIEPDTI 273
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ K L +ME + I P+ +T ILI+ GR+ +
Sbjct: 235 PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL 294
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +G PN T+ ++ G+ +A MI+ G + + ++Y ++ GLC
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC- 353
Query: 152 AGETKAALQL 161
ETK+ +++
Sbjct: 354 --ETKSVVEM 361
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
+LSR+M+ + P++ T+LI+ C +G + A + +++ G P+ +T LI
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
C G + +A D MI G + + V Y LI G C+ G A++L++ + E ++P
Sbjct: 807 CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ + R+ME + P++V TI+IN +CHL + +++ ++ +R P+ +T+T L+K
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 114 ----------------------------MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVL 145
C G++ +A D MI G + Y L
Sbjct: 743 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 146 INGLCKAGETKAALQLLRRIEELAVQPNAV 175
I CK G K A + R+ E V+P+ V
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSR---QM-----------EFK--GITP 67
H +MN P + +F ++L K+ +C V S+ + QM EF+ I+
Sbjct: 336 HRKNMNIPKAVDVFNKMLKK-RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISL 394
Query: 68 NMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH 127
+ V + + LG++ A + + +G P+ I +TTLI G C G+ S A
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 128 DDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+M G + V Y VL GL G + A + L+ +E V+P V
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYV 502
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 39 EILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKR 98
+ LG L K I L R+M KGI P+++ T LI C G+ + AF ++ +
Sbjct: 404 DALGKLGKVEE---AIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 99 GYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
G P+ + + L G+ NG +A M +G + VT+ ++I GL AGE A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 159 LQLLRRIEELAVQPNA 174
+E + + +A
Sbjct: 521 EAFYESLEHKSRENDA 536
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 4/153 (2%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + + F M P + + ++G + C L +M+ G TP++V
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+L G AF L + RG P +T +I+G+ GE+ KA F++ + K
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
+ + ++ G C AG A + R+E
Sbjct: 531 SREND----ASMVKGFCAAGCLDHAFERFIRLE 559
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M + P +++G+++G+ + N+ + K I P++ T TI+IN +C L
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
A+++ ++ +R P+ +T++ L+ + +M A + V Y +
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTI 703
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+IN C + K L + ++ + P+ V
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVV 734
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I F +++ SL + + +L M KG P ++++ G ++ A VL
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ RG P+ T+T +I G G + +A + K + + VTY LI G CK
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 154 ETKAALQLLRRIEELAVQPNA 174
E AL+LL ++ VQPNA
Sbjct: 492 EYDEALKLLNEMDRFGVQPNA 512
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
L M+ P P +F ++ + +K + + ME +G+ P++ T T++I+ +
Sbjct: 395 LLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK 454
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G ++ A +L K+ + +T+ LI+G C E +A+ ++M G Q N
Sbjct: 455 GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADE 514
Query: 142 YGVLINGLC-KAGETKAALQLLRRIEELAVQPNAV 175
Y LI C KA + + A L +++ + NA+
Sbjct: 515 YNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAI 549
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + +L A L R M +G PN T+LI C + R+ A V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + + +T+T L+ G C G+I K DDMI KG +++TY ++ K
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 152 AGETKAALQLLRRIEELAVQPN 173
+ L+L+ ++ ++ P+
Sbjct: 405 KESFEECLELMEKMRQIEYHPD 426
Score = 60.1 bits (144), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +FG +L +L K L M + N+ T L+ +C +G++ A V
Sbjct: 216 PDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYV 274
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + G+ P+ + +T L+ G + G+++ A DM +GF+ N Y VLI LCK
Sbjct: 275 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ A+++ +E + + V
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVV 358
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 54/96 (56%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
QM G P++V T L++ + + G++ A+ +L ++ +RG+ PN +T LI+ +C
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
+ +AM +M + + VTY L++G CK G+
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVT-STILINCFC 80
FL M P + + ++ + + + RQME GI PN+V+ T+L C
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
++N +VL RG + NT + + I + E+ KA+ + M K + + V
Sbjct: 473 SKKKVNVD-TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAV 170
T+ +LI+G C+ + A+ L+ +E+L++
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F I+ + K ++ M +G+ PN+V+ L+ + G A SV
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
LG+I + G P+ +++T L+ + + KA M + + N VTY LI+
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A+++ R++E+ ++PN V
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVV 461
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYH--PNTITFTTLIKGMCHN 117
M+ + P+ T I+I C LG+ + A + ++ ++ P+ +TFT+++
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
GEI + M+A+G + N V+Y L+ G + AL +L I++ + P+ V
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVT-STILINCFC 80
FL M P + + ++ + + + RQME GI PN+V+ T+L C
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 81 HLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQV 140
++N +VL RG + NT + + I + E+ KA+ + M K + + V
Sbjct: 341 SKKKVNVD-TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 141 TYGVLINGLCKAGETKAALQLLRRIEELAV 170
T+ +LI+G C+ + A+ L+ +E+L++
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F I+ + K ++ M +G+ PN+V+ L+ + G A SV
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
LG+I + G P+ +++T L+ + + KA M + + N VTY LI+
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A+++ R++E+ ++PN V
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVV 329
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYH--PNTITFTTLIKGMCHN 117
M+ + P+ T I+I C LG+ + A + ++ ++ P+ +TFT+++
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
GEI + M+A+G + N V+Y L+ G + AL +L I++ + P+ V
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +++ L + + + ++E KG ++V L+ +C LG++ A
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ ++GY PN T+ LI G C G + A+ +DM ++N T+ LI GL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 152 AGETKAALQLLRRIEE 167
G T L++L +++
Sbjct: 401 GGRTDDGLKILEMMQD 416
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 61/115 (53%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
QM +G P+++ S LI+ + G+I + ++ +++ RGY P + TF +I G C
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ + F +DM +G + +Y L+ LC G+ + A L R+ E ++ P+
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M M P +T F ++ + + + L + G P++VT T ++ C+ GR
Sbjct: 240 MSEMKEPNDVT-FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR 298
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A VL + +G + + TL+KG C G++ A F +M KG+ N TY +
Sbjct: 299 VSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNL 358
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI G C G +AL ++ A++ N
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAIRWN 387
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +F IL L K++ +R+M GI ++ T IL+ RI F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G PN + + TL+ +C NG++ +A +M + N VT+ +LI+ C
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCN 260
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+ ++ LL + L P+ V
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVV 284
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
L M P I +G ++ L H +++ ++ +G++P+ +L++ C
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
GR A + +L R P+ + TLI G +G+ +A + KG + + V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +I G C++G AL + R+ E + P+
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K+ + + KG+ PN ++ LI +C + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +RG P+ +T+ LI G+ +G + A++ +I +G + Y +L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
G A L + + + P+A
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDA 485
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ I+ K+ T I + R ME PN+VT T LIN FC G A +
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 97 KRGYHPNTITFTTLIKGMC-HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
R PN +T+TTLI+ + + + KA+++ + M+ N+VT+ L+ G K
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 156 K 156
K
Sbjct: 678 K 678
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +L L K + +M +G + + ++ IL+ C+ G++ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G PN + + T+I G C G+I A ++ KGF T+G +ING CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 152 AGETKAALQLLRRIEE 167
G+ A+ +LL ++E
Sbjct: 288 EGDFVASDRLLSEVKE 303
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 39/181 (21%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG-------- 83
P I + I+G K + ++++ KG P + T +IN FC G
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 84 ---------RINFAFSVLGNIL----KRGY----------------HPNTITFTTLIKGM 114
R++ F L NI+ + GY P+ T+ LI +
Sbjct: 298 LSEVKERGLRVSVWF--LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
C G+ A+ F D+ KG N ++Y LI CK+ E A +LL ++ E +P+
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 175 V 175
V
Sbjct: 416 V 416
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 6/157 (3%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKK---NHCFTVISLSRQMEFKGITPNMVTSTILINC 78
F ML N P ++ ++ + + V SLS + KG+ ++V +I
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE---KGVKVDVVHHNAMIKG 529
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
FC G ++ A + + + + P+ T++T+I G +++ A+ M + N
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 139 QVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
VTY LING C G+ K A + + ++ + PN V
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 71/160 (44%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ V+ + ++ P ++ ++ L K L +M + I P+ L
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I+ F G + A V +++G + + +IKG C +G + +A+ + M +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ TY +I+G K + A+++ R +E+ +PN V
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+SL + M+ +G P+ T L + ++ A +L +L G P T+ +I
Sbjct: 535 LSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G +S A+ ++ M G + N+V YG LING ++G + A+Q R +EE VQ N
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 174 AV 175
+
Sbjct: 655 HI 656
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 70 VTSTI--LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH 127
+TST LI+ + GR+N A ++ +LK G +T+TF T+I +G +S+A
Sbjct: 304 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL 363
Query: 128 DDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M KG + TY +L++ AG+ +AAL+ R+I ++ + P+ V
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTV 411
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 62/153 (40%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ ++ + F ML P F ++ + H SL ++ME KGI+P+ T
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL++ G I A I K G P+T+T ++ +C +++ +M
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIE 166
+ ++ + V++ G A L R +
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ 472
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 36 LFGEILGSLAK--KNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
L+ +L S+ K + CF VI + +P + T+++ GR SVL
Sbjct: 216 LYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLN 275
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ P+ + +T +++G+ + + KA D+++ G + TY V INGLCK
Sbjct: 276 QMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQN 335
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
+ + AL+++ + +L +PN V
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVV 357
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 53 VISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
V+S+ QM+ + P++V TI++ A + +L G P+ T+ I
Sbjct: 270 VVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYIN 329
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G+C +I A+ M G + N VTY +LI L KAG+ A L + +E V
Sbjct: 330 GLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNR 389
Query: 173 NA 174
N+
Sbjct: 390 NS 391
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 66 TPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMH 125
P++ T + IN C I A ++ ++ K G PN +T+ LIK + G++S+A
Sbjct: 318 APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKT 377
Query: 126 FHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+M G N T+ ++I+ + E A LL
Sbjct: 378 LWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLL 414
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 52 TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLI 111
T + M+ +GI+P+ T +IN FC +++ A + + P+ +++TT+I
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
KG + + ++M + G + N TY L+ GLC AG+ A +L+ + +
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 172 P 172
P
Sbjct: 393 P 393
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++G+L + + L +M G PN VT LI+ + +N A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ G P+ +T+ TLI G + AM + M A G + TY V+IN L KAG
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 157 AALQLLRRIEELAVQPNAV 175
AA +L + + PN V
Sbjct: 487 AAHKLFCEMVDQGCTPNLV 505
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ S + N+ +++ QM+ G P+ VT LI+ G ++ A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G P+T T++ +I + G + A +M+ +G N VTY ++++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + AL+L R ++ +P+ V
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKV 540
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 67/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+ L K H L +M +G TPN+VT I+++ A +
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ G+ P+ +T++ +++ + H G + +A +M K + ++ YG+L++ K
Sbjct: 527 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGK 586
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG + A Q + + ++PN
Sbjct: 587 AGNVEKAWQWYQAMLHAGLRPN 608
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 59/123 (47%)
Query: 45 AKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNT 104
AK + + ++M+ G++P+ T +++INC G + A + ++ +G PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 105 ITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRR 164
+T+ ++ A+ + DM GF+ ++VTY +++ L G + A +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 165 IEE 167
+++
Sbjct: 565 MQQ 567
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ S + N+ +++ QM+ G P+ VT LI+ G ++ A +
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G P+T T++ +I + G + A +M+ +G N VT+ ++I K
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + AL+L R ++ QP+ V
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKV 535
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINF---AFSVLG 93
+ ++G+L + + L +M G PN VT LI+ + GR N+ A +V
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY---GRANYLKEAMNVFN 418
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ + G P+ +T+ TLI G + AM + M G + TY V+IN L KAG
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Query: 154 ETKAALQLLRRIEELAVQPNAV 175
AA +L + PN V
Sbjct: 479 HLPAAHRLFCEMVGQGCTPNLV 500
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + + M P + I+ L K H L +M +G TPN+VT I+
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
I A + ++ G+ P+ +T++ +++ + H G + +A +M K +
Sbjct: 506 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 565
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ YG+L++ KAG A Q + + + ++PN
Sbjct: 566 VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPN 603
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 53/109 (48%)
Query: 45 AKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNT 104
AK + + ++M+ G++P+ T +++INC G + A + ++ +G PN
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 105 ITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+TF +I A+ + DM GFQ ++VTY +++ L G
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++G+L + + L +M G PN VT LI+ + +N A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ G P+ +T+ TLI G + AM + M A G + TY V+IN L KAG
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 157 AALQLLRRIEELAVQPNAV 175
AA +L + + PN V
Sbjct: 487 AAHKLFCEMVDQGCTPNLV 505
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ S + N+ +++ QM+ G P+ VT LI+ G ++ A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G P+T T++ +I + G + A +M+ +G N VTY ++++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + AL+L R ++ +P+ V
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKV 540
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 67/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+ L K H L +M +G TPN+VT I+++ A +
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ G+ P+ +T++ +++ + H G + +A +M K + ++ YG+L++ K
Sbjct: 527 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGK 586
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG + A Q + + ++PN
Sbjct: 587 AGNVEKAWQWYQAMLHAGLRPN 608
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 59/123 (47%)
Query: 45 AKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNT 104
AK + + ++M+ G++P+ T +++INC G + A + ++ +G PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 105 ITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRR 164
+T+ ++ A+ + DM GF+ ++VTY +++ L G + A +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 165 IEE 167
+++
Sbjct: 565 MQQ 567
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++G+L + + L +M G PN VT LI+ + +N A +V +
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ G P+ +T+ TLI G + AM + M A G + TY V+IN L KAG
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 157 AALQLLRRIEELAVQPNAV 175
AA +L + + PN V
Sbjct: 487 AAHKLFCEMVDQGCTPNLV 505
Score = 59.7 bits (143), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 68/144 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ S + N+ +++ QM+ G P+ VT LI+ G ++ A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G P+T T++ +I + G + A +M+ +G N VTY ++++ K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A + AL+L R ++ +P+ V
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKV 540
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 67/142 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+ L K H L +M +G TPN+VT I+++ A +
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 526
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ G+ P+ +T++ +++ + H G + +A +M K + ++ YG+L++ K
Sbjct: 527 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGK 586
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG + A Q + + ++PN
Sbjct: 587 AGNVEKAWQWYQAMLHAGLRPN 608
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 59/123 (47%)
Query: 45 AKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNT 104
AK + + ++M+ G++P+ T +++INC G + A + ++ +G PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 105 ITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRR 164
+T+ ++ A+ + DM GF+ ++VTY +++ L G + A +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 165 IEE 167
+++
Sbjct: 565 MQQ 567
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 88 AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
A + L ++ + G P+ + +TTLI G +GE+ KA +M KG N TY +I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 148 GLCKAGETKAALQLLRRIEELAVQPNAV 175
GLC AGE + A LL+ +E PN V
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFV 795
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 61/121 (50%)
Query: 45 AKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNT 104
K N ++ M+ GI P+++ T LI+ + G ++ A + + +G PN
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 105 ITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRR 164
T+ ++I+G+C GE +A +M ++G N V Y L+ L KAG+ A ++++
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 165 I 165
+
Sbjct: 820 M 820
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 65/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + F ++ L +K + + +M G++ N T T ++ + +G AF
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ G + T+ L+K C +G + A+ +M A+ N Y +LI+G +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 152 AGETKAALQLLRRIEELAVQPN 173
G+ A L++++++ V+P+
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPD 763
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 67/141 (47%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +G ++ K + +SR M+ +G+ N+ T +++IN F L AF+V
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++K G P+ I + +I C G + +A+ +M + T+ +I+G K
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 152 AGETKAALQLLRRIEELAVQP 172
+G+ + +L++ + P
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVP 622
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 56/109 (51%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G TP +VT LIN + +G+I+ A V + + G N T++ +I G + + A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+DM+ +G + + + Y +I+ C G A+Q ++ +++L +P
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 67/140 (47%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I + +L + K + ++++++M + I N ILI+ + G + A ++
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ K G P+ T+T+ I G++++A ++M A G + N TY LI G +A
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 154 ETKAALQLLRRIEELAVQPN 173
+ AL ++ + ++P+
Sbjct: 814 LPEKALSCYEEMKAMGIKPD 833
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+++ +G+ ++ T L+ C GR+ A +V + R N+ + LI G G
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ +A M +G + + TY I+ KAG+ A Q + +E L V+PN
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 798
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 29 NPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFA 88
N P ++ ++ A++ + L +QM+ +G+ P++ T T I+ G +N A
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 89 FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
+ + G PN T+TTLIKG KA+ +++M A G + ++ Y L+
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Query: 149 L 149
L
Sbjct: 844 L 844
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 62/150 (41%)
Query: 17 NTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILI 76
N + F M+ P + L+ I+ + + I ++M+ P T +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
+ + G + + V + + G P TF LI G+ ++ KA+ D+M G
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIE 166
N+ TY ++ G G+T A + R++
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G+ P+++ +I+ FC +G ++ A + + K + P T TF +I G +G++ +
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRR 607
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
++ D M G T+ LINGL + + + A+++L + V N
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 63/159 (39%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D + + M + P F I+ AK + + M G P + T L
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
IN ++ A +L + G N T+T +++G G+ KA + + +G
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ TY L+ CK+G ++AL + + + + N+
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 19 VSSFLHMLHMN--PPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILI 76
V+ F + N P IT F +L ++ +L +M + I ++ + L+
Sbjct: 323 VAKFFDEMQRNGVQPDRIT-FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
+ C G+++ AF +L + + PN ++++T+I G G +A++ +M G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++V+Y L++ K G ++ AL +LR + + ++ + V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+ + R+M GI ++VT L+ + G+ + V + + PN +T++TLI G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G +AM + + G + + V Y LI+ LCK G +A+ L+ + + + PN
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 174 AV 175
V
Sbjct: 584 VV 585
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINF--AFSVLGNILKRGYHPNTITFTTLI 111
IS+ M+ G+ PN+VT +I+ C G + F + + G P+ ITF +L+
Sbjct: 288 ISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 112 KGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
G A + D+M + + + +Y L++ +CK G+ A ++L ++ +
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 172 PNAV 175
PN V
Sbjct: 407 PNVV 410
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 64/144 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ AK ++L +M + GI + V+ L++ + +GR A +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G + +T+ L+ G G+ + +M + N +TY LI+G K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G K A+++ R + ++ + V
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVV 550
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 55/120 (45%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ + +LG K+ V + +M+ + + PN++T + LI+ + G A +
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
G + + ++ LI +C NG + A+ D+M +G N VTY +I+ ++
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 63/137 (45%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ +L ++ K + QM K I PN+V+ + +I+ F GR + A ++ G +
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
G + +++ TL+ G +A+ +M + G + + VTY L+ G K G+
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 157 AALQLLRRIEELAVQPN 173
++ ++ V PN
Sbjct: 497 EVKKVFTEMKREHVLPN 513
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 39 EILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKR 98
++ +L+K + L Q++ K P++V T ++ + + G+ V +L
Sbjct: 202 KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLAS 261
Query: 99 GYHPNTITFTTLIKGMCHNGEISK-AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKA 157
G PN T++ LIKG+ +G+ K A + +M+ G N TY + + G+ ++
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 158 ALQLLRRIEELAVQPN 173
A +LL+ ++ P+
Sbjct: 322 ARELLQEMKGKGFVPD 337
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 46 KKNHCF----TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYH 101
K N C+ V SL++QM+ G+ P+ ++I + ++ A V + G
Sbjct: 196 KLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSE 255
Query: 102 PNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
PN T++ L+KG+C G + + + F+ +M KG N Y VLI L A+++
Sbjct: 256 PNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEV 315
Query: 162 LRRIEELAVQPN 173
+ + ++ P+
Sbjct: 316 VYDMLANSLSPD 327
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 59/115 (51%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ G + + VT L++ + R A VL ++ G+ P+ +T+ +LI +G
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +AM + M KG + + TY L++G +AG+ ++A+ + + +PN
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ + A+ + L QM KG P++ T T L++ F G++ A S+
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLI 146
+ G PN TF IK + G+ ++ M D++ G + VT+ L+
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR-INFAFSVLGNI 95
+ ++ + A +++ ++ME G P ++T +++N F +G N S++ +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEI-SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
G P+ T+ TLI C G + +A ++M A GF +++VTY L++ K+
Sbjct: 271 KSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 155 TKAALQLLRRIEELAVQPNAV 175
K A+++L + P+ V
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIV 350
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M G +P++VT LI+ + G ++ A + + ++G P+ T+TTL+ G G
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++ AM ++M G + N T+ I G+ +++ I + P+ V
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 69/160 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K ++ +S F M + P I F + + ++ + ++ G++P++VT
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
L+ F G + V + + G+ P TF TLI G +AM + M+
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + TY ++ L + G + + ++L +E+ +PN
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 61/150 (40%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
M P + + +L + + +S+ +M G PN+ T I + + G
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYG 143
+ + I G P+ +T+ TL+ NG S+ +M GF + T+
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 144 VLINGLCKAGETKAALQLLRRIEELAVQPN 173
LI+ + G + A+ + RR+ + V P+
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R++ KGI P++++ +I +C R+ A + + G P+ IT+ T I +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG---ETKAALQLLRRIEELA 169
+A+ MI G + NQ TY +++G CK E K ++ LR ++ A
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHA 802
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFT-VISLSRQMEFKGITPNMVTSTILIN 77
V+ F M P + + IL K + + SL +M+ GI P+ T LI
Sbjct: 228 VNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 78 CFCHLGRINF-AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
C C G ++ A V + G+ + +T+ L+ + +AM ++M+ GF
Sbjct: 288 C-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ VTY LI+ + G A++L ++ E +P+
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS- 90
P IT ++ ++ + M+ +G TP+M T L+ + H +F S
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM--YMHSRSADFGKSE 684
Query: 91 -VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGL 149
+L IL +G P+ I++ T+I C N + A +M G + +TY I
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 150 CKAGETKAALQLLRRIEELAVQPN 173
+ A+ ++R + + +PN
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPN 768
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ ++ +L +L +L R+M KG+ P+ T IL+N +C G++ A L
Sbjct: 182 VDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD 241
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ +RG++P LI+G+ + G + A M GF + T+ +LI + K+G
Sbjct: 242 EMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Query: 154 ETKAALQL 161
E + +++
Sbjct: 302 EVEFCIEM 309
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I F ++ +++K I + G+ ++ T LI +G+I+ AF +
Sbjct: 285 PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRL 344
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L N ++ G+ P + +IKGMC NG A F DM K N+ Y +LI +
Sbjct: 345 LNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGR 404
Query: 152 AGETKAALQLLRRIEELAVQP 172
G+ A L + E+ + P
Sbjct: 405 GGKFVDAANYLVEMTEMGLVP 425
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K + + F M P + + E++ L K + M G+TP++V
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN-GEISKAMHFHDDMIA 132
L+N +GR+ +V + P +++ T+IK + + +S+ + D M A
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
++ TY +LI+G CK + AL LL ++E P
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 59/136 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K V F M + P + + ++ + K SL R+ME G ++ +
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
I++N F G A + I G P+ +T+ TL+ H G +A +M K
Sbjct: 554 IILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 134 GFQFNQVTYGVLINGL 149
GF+++ +TY +++ +
Sbjct: 614 GFEYDAITYSSILDAV 629
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 10/137 (7%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ S K + I L +M+ + P T L+ + +G++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G P T+T LIKG+ G + +A F+ DM+ G + V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 152 AGETKAALQLLRRIEEL 168
G R+EEL
Sbjct: 351 VG----------RVEEL 357
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVT-S 72
+ D + ML P + ++ L K + ++ +M TP +V+ +
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T++ F ++ S + P+ T++ LI G C + KA+ ++M
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
KGF Y LIN L KA +AA +L + ++E
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ ++ C+ + + +E + P++V+ +I FC G + A +
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +RG P T+ T + G G ++ + M + N++T+ ++++G C+
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 152 AGETKAALQLLRRIE 166
AG+ A+ + +I+
Sbjct: 784 AGKYSEAMDFVSKIK 798
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCF-TVISLSRQMEFKGITPNMVTS 72
K + + F M M P P + + IL K + ++ + +M KG+ + T
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+ +++ G + A + GY P T+T+ L++ G ++A+ +M
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ VTY L+ +AG +K A ++ + + V PNA+
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 63/159 (39%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D + F M P + +L L KK+ +I + M+ G +PN T
Sbjct: 401 KEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWN 460
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
++ + G F V + G+ P+ TF TLI G A + +M
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
GF TY L+N L + G+ ++ ++ ++ +P
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRI-NFAFSVLGNI 95
+ IL + ++ I L +M+ G +P +VT ++++ F +GR VL +
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
+G + T +T++ G + +A F ++ + G++ VTY L+ KAG
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 156 KAALQLLRRIEELAVQPNAV 175
AL +L+ +EE + ++V
Sbjct: 333 TEALSVLKEMEENSCPADSV 352
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +F +L + N + + G++P++VT L++ + G A +
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + K P+ +++ T+IKG C G + +A+ +M +G + TY ++G
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 152 AG 153
G
Sbjct: 749 MG 750
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 52/109 (47%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G P+MV +++ F + A +L +I + G P+ +T+ +L+ GE KA
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ + + V+Y +I G C+ G + A+++L + E ++P
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 24 HMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLG 83
H ++ N P I +L + ++ ++ L + GI PN++T ++ + +
Sbjct: 120 HSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVR 179
Query: 84 RINFAFSVLGNILKRG-YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTY 142
+ A + +P+ TF L+KG+ N + KAM +DM KGF + V Y
Sbjct: 180 KPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVY 239
Query: 143 GVLINGLCKAGETKAALQLLRRIEE 167
L+ G K + L+L + ++E
Sbjct: 240 SYLMMGCVKNSDADGVLKLYQELKE 264
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 53/106 (50%)
Query: 68 NMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH 127
N+ T +++N +C G+ A V + P+T++F L+ +C N +++A +
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 128 DDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+M K + ++ TYG+L++ K G+ + + E ++PN
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M P I + +L ++ + V ++R+M+ +G P++V I+IN C
Sbjct: 220 FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 279
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
+ A + +R P+ F +LI G+ +++ A+ F + + GF T
Sbjct: 280 AKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 339
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
Y L+ C + + A + + + V PNA
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA 372
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 65/153 (42%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F M H P I + +L + A + + R M GI P++ T + L+ F
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
L R+ +LG + G P+ ++ L++ +G I +AM M A G N T
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 142 YGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
Y VL+N ++G QL ++ P+A
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 63/143 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P IT + +L + AK + + QM+ G TPN T ++L+N F GR + +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ P+ T+ LI+ G + + DM+ + + + TY +I K
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 152 AGETKAALQLLRRIEELAVQPNA 174
G + A ++L+ + + P++
Sbjct: 435 GGLHEDARKILQYMTANDIVPSS 457
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
K P++ L+N C + R+ A ++ ++ RG+ P+ +TFTTLI G C E+
Sbjct: 156 KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
A D+M G + N +T VLI G K + + +L++ + E
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 63/145 (43%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P +TL + G LA+ + L+R M I P +V +I L + + A S
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
V G + K ++ T+ +I G+C ++ A F DD+I + + Y + GLC
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
++G A L + + PN V
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVV 625
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 66/144 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ L K + +S+ Q+E +T + T I+I+ C +++ A
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++ + + +KG+C +G +S A HF D+ G N V Y +I +
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSR 636
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+G + A Q+L + + P+AV
Sbjct: 637 SGLKREAYQILEEMRKNGQAPDAV 660
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + FG ++ ++ V + M+ +G+ + T I I C + A ++
Sbjct: 220 PNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKAL 279
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L +L G PNT+T++ LI G C+ + +A M+ +G + + Y LI LCK
Sbjct: 280 LDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCK 339
Query: 152 AGETKAALQLLR 163
G+ + AL L +
Sbjct: 340 GGDFETALSLCK 351
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+ME KGI PN + ++I+ F + + VL + RG + T+ I+ +C
Sbjct: 212 EMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ +A D M++ G + N VTY LI+G C + + A +L + + +P++
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDS 327
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC---HNGEI 120
GI P++ T +I FC G + ++S++ + ++G PN+ +F +I G + E+
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 121 SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
K + D +G TY + I LCK ++K A LL + ++PN V
Sbjct: 242 GKVLAMMKD---RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTV 293
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 41 LGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY 100
+ SL K+ +L M G+ PN VT + LI+ FC+ A + ++ RG
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 101 HPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQ 160
P++ + TLI +C G+ A+ + + K + + L+NGL K + + A +
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 161 LLRRIEE 167
L+ +++E
Sbjct: 384 LIGQVKE 390
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 67/142 (47%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M+ N I + L LA + +++L +++ G+ P++ + +I +
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G+++ A + I+K GY P+ TF L+ MC G+ A+ + +K + Q T
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 142 YGVLINGLCKAGETKAALQLLR 163
L++ L K + + A ++++
Sbjct: 358 LQQLVDELVKGSKREEAEEIVK 379
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
ITPN T I I+ +C R+ A + + G+ P I++TT+I+ C E K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+M A G N +TY +++ L E + AL++ R++ +P+++
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F + K N + ++M+ G P +++ T +I C+C + +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G PN+IT+TT++ + E +A+ M G + + + Y LI+ L +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 152 AGETKAALQLLR-RIEELAVQPN 173
AG + A ++ R + EL V N
Sbjct: 342 AGRLEEAERVFRVEMPELGVSIN 364
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
ITPN T I I+ +C R+ A + + G+ P I++TT+I+ C E K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+M A G N +TY +++ L E + AL++ R++ +P+++
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F + K N + ++M+ G P +++ T +I C+C + +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G PN+IT+TT++ + E +A+ M G + + + Y LI+ L +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 152 AGETKAALQLLR-RIEELAVQPN 173
AG + A ++ R + EL V N
Sbjct: 342 AGRLEEAERVFRVEMPELGVSIN 364
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + +L ++ + ++ S+ ++E G + + +IN F G + A
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG---FQFNQVTYGVLING 148
L + + G +P T T+ TLIKG G+ ++ D M+ +G N T+ VL+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 149 LCKAGETKAALQLLRRIEELAVQPNAV 175
CK + + A ++++++EE V+P+ V
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTV 224
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEIL---GSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ V + L M + P + + ++ G K ++ L + + PN+ T
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA-MHFHDDMI 131
+L+ +C ++ A+ V+ + + G P+T+T+ T+ GE +A + M+
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 132 AK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
K + N T G+++ G C+ G + L+ +RR++E+ V+ N V
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 71 TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM 130
+ T L+N GR + A +V + + G+ P+ I++TTL+ M + ++
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G + + + + +IN ++G + A+Q L +++EL + P
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + +L ++ + ++ S+ ++E G + + +IN F G + A
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG---FQFNQVTYGVLING 148
L + + G +P T T+ TLIKG G+ ++ D M+ +G N T+ VL+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 149 LCKAGETKAALQLLRRIEELAVQPNAV 175
CK + + A ++++++EE V+P+ V
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTV 224
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEIL---GSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ V + L M + P + + ++ G K ++ L + + PN+ T
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA-MHFHDDMI 131
+L+ +C ++ A+ V+ + + G P+T+T+ T+ GE +A + M+
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 132 AK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
K + N T G+++ G C+ G + L+ +RR++E+ V+ N V
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 71 TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM 130
+ T L+N GR + A +V + + G+ P+ I++TTL+ M + ++
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G + + + + +IN ++G + A+Q L +++EL + P
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
+++ M G P+ +T + L+ C R+ A VL + +G P+ T+T LI+G C
Sbjct: 392 ITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHC 451
Query: 116 HNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK-AALQLLRRIEELAVQP 172
N E+ KA+ +M+ KGF + VLI+G + + A++ L+ ++ V+P
Sbjct: 452 KNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKP 509
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
QME +G P++ T TILI C ++ A + N+L++G+ ++ LI G +
Sbjct: 430 QMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHN 489
Query: 119 EISKAMHFHDDMIAKG-FQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+ A F +M+ + Q TY +LI+ L K +++ AL LL+ +++
Sbjct: 490 KFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 63/121 (52%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
S+ + M+ K +TP+ V + LI+ H ++ AF +L + +G TI++++L+
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
C+ + KA+ ++ + + + T LI LC+ + A++ L I+ L ++PN
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 175 V 175
+
Sbjct: 785 I 785
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
TI +N G +FA S+ ++ ++ P+ + F+ LI H + +A D +
Sbjct: 648 TIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKS 707
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+G + ++Y L+ C A + K AL+L +I+ + ++P
Sbjct: 708 QGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 4/165 (2%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
K D F M + + FG ++ A+ + K + P+ V
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHP---NTITFTTLIKGMCHNGEISKAMHFHDDM 130
LI+ G ++ AF VL +K HP + I+ L+K C+ G++ +A + +
Sbjct: 577 ALISACGQSGAVDRAFDVLAE-MKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + Y + +N K+G+ A + + ++E V P+ V
Sbjct: 636 HKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + L+ I+ +L K + +++ + G+ T IL+ C GRI +
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + + P+ +T +IK + G + ++ D+M + + + YG L+ GLCK
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 152 AGETKAALQLLRRIE 166
G + +L ++
Sbjct: 346 DGRVERGYELFMEMK 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 44 LAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPN 103
L + H L M+ +G P+ ILI R + V + K G+ P
Sbjct: 168 LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPR 227
Query: 104 TITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
+ ++ + NG A+ ++D G T+ +L+ GLCKAG + L++L+
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 164 RIEELAVQPN 173
R+ E +P+
Sbjct: 288 RMRENLCKPD 297
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS- 72
+ ++ +S F + N F +L + K++ + R+ + + +T+
Sbjct: 96 RLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITAL 155
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI- 131
+L+ C + R + A V + +G +P+ ++ L+KG C G++ +A H M
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 132 ---AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
KG + V Y +L++ LC AGE A+++L +I
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY-HPNTITFTTLIKGMCHNG 118
M KG P + C G++ A SV+ + +G+ P + LIKG+C +G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 119 EISKAMHFHDDMIAK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+ +A+ + M + N+ TY L++GLC+ G+ A Q++ +
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS- 72
+ ++ +S F + N F +L + K++ + R+ + + +T+
Sbjct: 96 RLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITAL 155
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI- 131
+L+ C + R + A V + +G +P+ ++ L+KG C G++ +A H M
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 132 ---AKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
KG + V Y +L++ LC AGE A+++L +I
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGY-HPNTITFTTLIKGMCHNG 118
M KG P + C G++ A SV+ + +G+ P + LIKG+C +G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 119 EISKAMHFHDDMIAK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
+ +A+ + M + N+ TY L++GLC+ G+ A Q++ +
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 68 NMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH 127
++ T +I +C G A+ + + PN IT+ T+I G NG+ +AM
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 128 DDMIAKG-FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
M G Q N T+ ++I G + G+ AL+L R+++ PN+V
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 53 VISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
+ L ++ME +GI+P +VT ILI + LG+ + A ++ + G + T+T +I
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
G+ HNG +A+ M G N VT
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 57.0 bits (136), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 69/159 (43%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D F M P ++F ++ S+ K T + + +M+ G P+
Sbjct: 328 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
LI+ + G+++ A + + K G+ PN +T +I+ +G++ AM DM
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
GF TY L+ +G+ +A+++ + ++P
Sbjct: 448 GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
I+ SLAK L +QM+ + + P+ + L++ GR++ + V + G
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ P+ F +LI G++ A+ D+M GF+ N Y ++I K+G+ + A+
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 160 QLLRRIEELAVQP 172
+ + +E+ P
Sbjct: 439 TVFKDMEKAGFLP 451
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 70/156 (44%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ D ++ ++ M P T+F ++ S AK T + L +M+ G PN T
Sbjct: 363 RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
++I G++ A +V ++ K G+ P T++ L++ +G++ AM ++ M
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA 169
G + +Y L+ L A ++L ++ +
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
IL+ FC + A S+ + R ++P+ T L+ G G+++ F+ +M+ +
Sbjct: 181 ILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKR 239
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEEL 168
GF+ N VTYG+ I+G CK AL+L ++ L
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRL 274
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M +G PN VT I I+ FC A + ++ + + TTLI G
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
KA D++ +G + Y L++ L K G+ A+++++ +EE ++P++V
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSV 351
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 44 LAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPN 103
L K+ V+ L ++ K P+++ +T L+ RI + S+L +L + +
Sbjct: 244 LCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVD 303
Query: 104 TITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
TI ++ ++ G++ A D+M+ +GF N Y V + C+ G+ K A +LL
Sbjct: 304 TIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLS 363
Query: 164 RIEELAVQP 172
+EE V P
Sbjct: 364 EMEESGVSP 372
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M +G+ P+ ++ + +N A +L + +G+ P+ T++ LI+G +
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 120 ISKAMHFHDDM----IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
I +A+ +M ++ GF+ + LI GLC G+ +A + L+ +++ ++PNA
Sbjct: 460 IDQALKLFYEMEYRKMSPGFE----VFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNA 514
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + +L S + K L +M+ G+ PN V T L+ + G + + +
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + GY N + + L+ G+ G++ +A DDM KG + + ++I+ LC+
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 152 AGETKAALQLLRRIE 166
+ K A +L R E
Sbjct: 390 SKRFKEAKELSRDSE 404
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 36 LFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNI 95
++G +L A + +QM+ +G +PN+ + L+N + G A ++ +
Sbjct: 239 MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEM 298
Query: 96 LKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGET 155
G PN + TTL+K G ++ ++ + G+ N++ Y +L++GL KAG+
Sbjct: 299 KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKL 358
Query: 156 KAA 158
+ A
Sbjct: 359 EEA 361
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVT-STILINCFCHLGRINFAFSVLGNILKR 98
IL L K + I L QM+ G+ P++VT +T+L C A ++G +
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 99 GYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAA 158
G +++ + T++ NG +A +F M +G N Y L+N G+ K A
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 159 LQLLRRIEELAVQPNAV 175
+L+ ++ + + PN V
Sbjct: 292 DELMTEMKSIGLVPNKV 308
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 58/109 (53%)
Query: 66 TPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMH 125
TPNM+T T+L+N +C + + A + +++ +G P+ + +++G+ + + S A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 126 FHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
M +KG N +Y ++I CK + A++ + + +QP+A
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 51/112 (45%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISK 122
+G+ P++V +++ + + A + + +G PN ++T +I+ C +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 123 AMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
A+ + DDM+ G Q + Y LI G + +LL+ ++E P+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 76 INCFC-HLGRINFA--FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
INC LGR VL + LK + PN +T+T L+ G C + +A +DMI
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+G + + V + V++ GL ++ + A++L ++ PN
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 60/149 (40%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P I +L L + I L M+ KG PN+ + TI+I FC
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
+ A +++ G P+ +T LI G ++ +M KG + TY
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 145 LINGLCKAGETKAALQLLRRIEELAVQPN 173
LI + + A ++ ++ + ++P+
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPS 472
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 57/109 (52%)
Query: 66 TPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMH 125
TPNM+T T+L+N +C + + A + +++ G P+ + +++G+ + + S A+
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 126 FHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
M +KG N +Y ++I CK + A++ + + +QP+A
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 76 INCFC-HLGRINFA--FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
INC LGR VL + LK + PN +T+T L+ G C + +A +DMI
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + + V + V++ GL ++ + A++L ++ PN
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 57/109 (52%)
Query: 66 TPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMH 125
TPNM+T T+L+N +C + + A + +++ G P+ + +++G+ + + S A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 126 FHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
M +KG N +Y ++I CK + A++ + + +QP+A
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 76 INCFC-HLGRINFA--FSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
INC LGR VL + LK + PN +T+T L+ G C + +A +DMI
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + + V + V++ GL ++ + A++L ++ PN
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
KA + V+S M + P + ++ ++ K+ V+ ++ME + P++VT
Sbjct: 871 QKALDKVNS---MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
T +I + LG++ A++ N+ +RG P+ T++ I +C + A+ +M+
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
KG + + + + GL + G+ A L++ L Q
Sbjct: 988 KGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALVAQ 1026
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILGSLAKKN--HCFTVISLSRQMEFKGITPNMVTSTILI 76
+ +F M M P + F ++ L +K + R+M G P+ +
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
C C +G A S L ++ K G+ P T+ ++ I+ +C G++ +A+ +
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+Q TYG +++GL + G+ + AL + ++E+ +P
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKP 887
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 53 VISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
V L +ME G ++ T TILI+ + +I V + K G+ + + +I+
Sbjct: 208 VDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIR 267
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
+C G A+ F+ +M+ KG F TY +L++ + K+
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKS 307
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M+ KG+ P++VT LI+ +C I A+ ++ + + P+ IT+TT+I G+ G+
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
KA +M G + Y I C A A +L+ + + + PNA
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 64/139 (46%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ S KK + T + QM ++ T ++I +GR + A +VL +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
K+G + + + + TLI + + +A D M + G + V+Y +I KAG+ K
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 157 AALQLLRRIEELAVQPNAV 175
A + L+ + + PN V
Sbjct: 753 EAYKYLKAMLDAGCLPNHV 771
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P++ T LI+ C G+ A V + G+ P+ T+ LI+G C + + AM
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
+ +M GF + + Y L++G KA + A QL ++ + V+
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+++ G P+ T ILI C R++ A + G + G+ P+TI + L+ G
Sbjct: 314 ELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKAR 373
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
++++A + M+ +G + + TY +LI+GL + G +A L
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF 417
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 73/163 (44%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
++ D+ + + M + P ++ +L K L +M +G+ + T
Sbjct: 338 YRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTY 397
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
ILI+ GR F++ ++ K+G + ITF+ + +C G++ A+ ++M
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+GF + VT L+ G K G +L++ I E + PN +
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVL 500
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 61/134 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + IL SL ++ ++E G + VT ILI C+ G I A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L I+ +GY P+ ++ ++ G+ G D+M G + T+ +++ G CK
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 152 AGETKAALQLLRRI 165
A + + A +++ ++
Sbjct: 441 ARQFEEAKRIVNKM 454
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 62 FKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEIS 121
+ I P+ ++ ILI +C G A ++ + +G TI FTT++ + GE+
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
A + ++M+ KG + + Y V I K + +L+ + + ++P+ +
Sbjct: 227 VADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVK-ELIEEMSSMGLKPDTI 279
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P +VT L+ FC G + A +L ++ RG P T T+ K + + + M+
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ +I G +++TY +++ LC+ G+ A+Q+ + ++ + P+
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTS 72
+K + ++ + ++ P + IL L + + ++++M+ +GI P+++T+
Sbjct: 404 NKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTT 463
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
T+LI+ C L + AF N ++RG P ITF M NG SK M
Sbjct: 464 TMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFK-----MIDNGLRSKGM 510
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 62/137 (45%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGR 84
M+ P T + +K N ++L ++ G +P+ +T +++ C G+
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 85 INFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGV 144
++ A V + RG P+ +T T LI +C + +A D+ + +G +T+ +
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 145 LINGLCKAGETKAALQL 161
+ NGL G + A +L
Sbjct: 501 IDNGLRSKGMSDMAKRL 517
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 56/120 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + ++ + K + + M +G+ P T F + ++
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+++ G+ P+ +T+ ++K +C +G++S AM + +M +G + +T +LI+ LC+
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P T ++I + F ++G ++ G P+ T+ +I+GMC ++ +A F
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
D+M KG+ + VTY + LC+ +T AL+L R+ E P+
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS 445
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 54/116 (46%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P F ++ +LAK + L +M G P++ T +I C +++ A+
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
L + +GY P+ +T+ ++ +C N + +A+ + M+ + TY +LI+
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 69/158 (43%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
D+ +++F ML P + ++ K + ME +G P T I+
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGF 135
IN + R + +LG + +G PN +T TTL+ +G + A+ ++M + G
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Query: 136 QFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+ + Y LIN + G ++ A+ R + ++P+
Sbjct: 581 KPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Score = 53.1 bits (126), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P T + ++ S + + L +M+ +GI PN+VT T L++ + GR N A
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G P++ + LI G +A++ M + G + + + LIN +
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A +L+ ++E V+P+ V
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVV 655
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ L +I+ AK + L + G++ T +I+ GR A ++
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ + G P T + L+KG G + A +M +G ++ TY +LI+ AG
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 154 ETKAALQLLRRIEELAVQPNA 174
++A +L+ +E VQPN+
Sbjct: 389 RWESARIVLKEMEAGDVQPNS 409
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
S+ +ME +G++P+ T ++LI+ + + GR A VL + PN+ F+ L+ G
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
GE K +M + G + ++ Y V+I+ K A+ R+ ++P+
Sbjct: 420 RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDR 479
Query: 175 V 175
V
Sbjct: 480 V 480
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P T++ ++ + A++ ++ R M G+ P+++ LIN F R AF+V
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
L + + G P+ +T+TTL+K + + K +++MI G
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 59/144 (40%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P +F +L + + ++M+ G+ P+ ++I+ F ++ A +
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L G P+ +T+ TLI C +G A + M +G TY ++IN
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
+LL +++ + PN V
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVV 550
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 58/113 (51%)
Query: 62 FKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEIS 121
F I P+ T ILI+ FC + + A +++ + + P+ +T+T+ ++ C G+
Sbjct: 266 FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 122 KAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+ ++M G N VTY ++++ L K+ + AL + +++E P+A
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDA 378
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 62/136 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + + + K+ V + +M G PN+VT TI+++ ++ A V
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + G P+ +++LI + G A +DM +G + + + Y +I+
Sbjct: 366 YEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALH 425
Query: 152 AGETKAALQLLRRIEE 167
+ AL+LL+R+E+
Sbjct: 426 HSRDEMALRLLKRMED 441
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 54/112 (48%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M+ TP++VT T + +C G +L + + G +PN +T+T ++ + + +
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQ 171
+++A+ ++ M G + Y LI+ L K G K A ++ + V+
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 61/137 (44%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ SL K N +L +M GI P + T + LI + G+ A
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+L+ G P+ + ++ ++ + E KA + DMI+ G + Y ++I GL K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 152 AGETKAALQLLRRIEEL 168
+ + +R +EEL
Sbjct: 556 ENRSDDIQKTIRDMEEL 572
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 56 LSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMC 115
L ++E KG P+ VT L+ F V + K G+ + +T+ T+I
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 116 HNGEISKAMHFHDDMIA-KGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
G++ A+ + DM G + +TY VLI+ L KA T A L+ + ++ ++P
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRI--NFAFSV 91
+ ++ ++G ++ L M +G P++++ LIN G + N A +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + G P+ IT+ TL+ + + A+ +DM A Q + TY +I+ +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
G A +L +E P+AV
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAV 368
Score = 46.6 bits (109), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +L + ++ ++ + + ME P++ T +I+ + G A +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ +G+ P+ +T+ +L+ K + M GF +++TY +I+ K
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 152 AGETKAALQLLRRIEELAVQ-PNAV 175
G+ ALQL + ++ L+ + P+A+
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAI 439
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 29 NPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFK--GITPNMVTSTILINCFCHLGRIN 86
N P + I+ ++ + ISL Q FK I PN+V+ +IN C G ++
Sbjct: 175 NTRPTVFTCNAIIAAMYRAKRYSESISLF-QYFFKQSNIVPNVVSYNQIINAHCDEGNVD 233
Query: 87 FAFSVLGNILKRG-YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVL 145
A V +IL + P+++T+ L KG+ G I A +M++KG + Y L
Sbjct: 234 EALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNL 293
Query: 146 INGLCKAGETKAALQLLRRIE 166
I G G+ A++ ++
Sbjct: 294 IRGYLDLGDFDKAVEFFDELK 314
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 14 KADNTVSS---FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMV 70
KA T ++ F M+ P + +G +L +L K + M GI PN+
Sbjct: 470 KASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLY 529
Query: 71 TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM 130
T + + + N ++L + +G P+ +TF +I G NG A + M
Sbjct: 530 AYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRM 589
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQL 161
++ + N++TY +LI L + + A +L
Sbjct: 590 KSENVEPNEITYEMLIEALANDAKPRLAYEL 620
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
+ M+ P + ++ L K+N + + + ++ + T LIN +C
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQN---------KLAQARKVSKSCSTFNTLINGYCK 118
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
R+ ++ + +RG N IT+TTLI G G+ + A+ +M++ G + +T
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 142 YGVLINGLCKAGETKAALQLL 162
+ ++ LC E + A+ +L
Sbjct: 179 FRDILPQLCSRKELRKAVAML 199
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
G+ P++ T ++I F LGR A + +++RG P+TIT+ ++I G+C ++++A
Sbjct: 44 GLQPDVQTYNMMIR-FSSLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
++K T+ LING CKA K + L + + N +
Sbjct: 100 RK-----VSKSCS----TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVI 142
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 44 LAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPN 103
+ K + + L ++M+ + + ++V +I + F V + +RG PN
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 104 TITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
T T+IK +C +G + A D+M +G Q + +TY L + L K E L L
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFG 350
Query: 164 RIEELAVQPN 173
R+ V+P
Sbjct: 351 RMIRSGVRPK 360
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Query: 16 DNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQ--MEFKGITPNMVTST 73
D+ + F M + P + F +L + + V L + + ITP+ ++
Sbjct: 119 DHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYG 178
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+LI +C G+ A ++ ++ +G I FTT++ + NG + +A +M+ K
Sbjct: 179 MLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK 238
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
G + Y V + K + +L+ + + ++P+ V
Sbjct: 239 GCDLDNTVYNVRLMNAAKESPERVK-ELMEEMSSVGLKPDTV 279
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
PN T LI+ C GR A +L + +G+ PN ++ +L+ +GEI A+
Sbjct: 322 PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKC 381
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+MI G + ++Y L++ C+ G+ A +LL + E
Sbjct: 382 LWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 422
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + +G ++ +L KK + L R M P++ +I+ C RI A V
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQF--NQVTYGVLINGL 149
I ++G PN +T+ +L+K +C K ++M KG N VT+ L+
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYS 399
Query: 150 CKAGETKAALQLL 162
++ + L+ +
Sbjct: 400 QRSKDVDIVLERM 412
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 5/165 (3%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISL--SRQMEFKGITPNMV 70
HK D V F + F +L L + H +L SR+ EF M
Sbjct: 192 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM- 250
Query: 71 TSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDM 130
+++N +C LG ++ A +I+ P+ +++ T+I + G++ KAM + M
Sbjct: 251 --NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM 308
Query: 131 IAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ +I+ LC AL++ R I E PN V
Sbjct: 309 WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVV 353
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%)
Query: 37 FGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNIL 96
+ ++ L K+N+ V + +M +G++PN T + FC G ++ A + +
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 97 KRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETK 156
+ G+ P +++ LI +C N + +A I +G T+ L N LC G+
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPD 479
Query: 157 AALQLLRRIEELAVQPNAV 175
A +L+ E + P +
Sbjct: 480 MARELVIAAAERDLLPKRI 498
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 17 NTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILI 76
N V F + + P + ++ +L K+ + ME +GI + L
Sbjct: 645 NLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLA 704
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
C C GR N ++L I + P +T+T LI+ +G I A + D M K
Sbjct: 705 RCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM-KKVCS 763
Query: 137 FNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
N VT +++ + G + A +L +++ E
Sbjct: 764 PNLVTCNIMLKAYLQGGLFEEARELFQKMSE 794
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ +L + ++ + +Q++ +G P+ VT +++ + N
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ K PN + + L+ + G+ +A+H +DM ++G + Y L LC
Sbjct: 651 FRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCS 709
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
AG L +L++I +A +P V
Sbjct: 710 AGRCNEGLNMLKKICRVANKPLVV 733
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 36 LFGEILGSLAKK--NHCF--TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
LF +LG NH + TV SL RQM GI P++ +NC GR +
Sbjct: 186 LFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFA----LNCLVK-GRTINTREL 240
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +G+ PN ++ +L+ +GEI A+ +MI G + ++Y L++ C+
Sbjct: 241 LSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCR 300
Query: 152 AGETKAALQLLRRIEE 167
G+ A +LL + E
Sbjct: 301 KGKYDEATRLLEMLRE 316
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 36 LFGEILGSLAKK--NHCF--TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
LF +LG NH + TV SL RQM GI P++ +NC GR +
Sbjct: 211 LFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFA----LNCLVK-GRTINTREL 265
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + +G+ PN ++ +L+ +GEI A+ +MI G + ++Y L++ C+
Sbjct: 266 LSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCR 325
Query: 152 AGETKAALQLLRRIEE 167
G+ A +LL + E
Sbjct: 326 KGKYDEATRLLEMLRE 341
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I F ++G K+ + + + ME + + ++ + +LI+ F G++ A ++
Sbjct: 246 IVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVL 305
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
+ + + + ++ G G + K + + +M ++G N+ TY VL+NGLCKAG
Sbjct: 306 MMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAG 365
Query: 154 ETKAALQLLR--RIEELAVQPN 173
+ A+ L R+ E +
Sbjct: 366 KVCEAMSFLNELRVNEFEIDEE 387
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 63 KGITPNMVTSTILINCFCHLGRINFAFSVLGNILK---RGYHPNTITFTTLIKGMCHNGE 119
K P+ T L+ + GR+ +L + + R HP+ +T+TT++ + G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI-EELAVQPNAV 175
+ +A +M G N++TY VL+ G CK + A LLR + E+ ++P+ V
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R+ + + P+ VT T +++ F + G ++ A VL + + G N IT+ L+KG C
Sbjct: 441 RRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQ 500
Query: 118 GEISKAMHFHDDMIAK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+I +A +M G + + V+Y ++I+G ++ AL + + P +
Sbjct: 501 LQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKI 559
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 25 MLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQM-EFKGITPNMVTSTILINCFCHLG 83
M M P + +L K+ L R+M E GI P++V+ I+I+ +
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 84 RINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG-FQFNQVTY 142
A + + RG P I++TTL+K +G+ A D+M+ + + + +
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 143 GVLINGLCKAGETKAALQLLRRIEELAVQPN 173
+L+ G C+ G + A +++ R++E PN
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG-YHPNTITFTTLIK 112
++ +M +GI P ++ T L+ F G+ A V ++ + I + L++
Sbjct: 543 LAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVE 602
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
G C G I A M GF N TYG L NG+ +A + AL L + I+E
Sbjct: 603 GYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ +F ++ A + ++L + M+ GI P+++T LI+ F H+ +L
Sbjct: 183 LVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILE 242
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLI 146
+ GY P+ +++T++I G+ HN + KA M+ G N T L+
Sbjct: 243 LMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 67/141 (47%)
Query: 35 TLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGN 94
+++ +L SL KK+ VI L +M +G+ PN T T++++ + G A G
Sbjct: 259 SVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGE 318
Query: 95 ILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGE 154
+ G+ P +T++++I G+ KA+ ++DM ++G + T +++ K
Sbjct: 319 MKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTEN 378
Query: 155 TKAALQLLRRIEELAVQPNAV 175
AL L +E + + V
Sbjct: 379 YPKALSLFADMERNKIPADEV 399
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + I+GS + + S + + G+ P++ T ILI F G SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ + KR + T+T+ +I+ G I K M +G + N +TY L+N K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 152 AGETKAALQLLRRI 165
AG +LR+I
Sbjct: 404 AGLVVKIDSVLRQI 417
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 38/182 (20%)
Query: 19 VSSFLHMLHMNPPPPITLFGEILG---SLAKKNHCFTVISLSRQMEFKGITPNMVTSTIL 75
V F M+ + P + + ++ L + FTV+S +++ +G+ P++V ++
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS---KVQSEGLAPDIVLCNLM 323
Query: 76 INCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEI--------------- 120
I+ + LGR A V ++ KR P+ TF +++ +C +G+
Sbjct: 324 IHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFD 383
Query: 121 -----------------SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLR 163
S A+ M K F + TY V ++ LC+ G +AA+++ +
Sbjct: 384 LVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Query: 164 RI 165
I
Sbjct: 444 II 445
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
++M +G PN ++ C G ++ AF V+G ++ G + ++ L+ G +
Sbjct: 201 KRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRS 260
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
GE KA+ + MI G N VTY LI G G A +L +++ + P+ V
Sbjct: 261 GEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 73 TILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIA 132
+ +I+ LG+ N A + + Y + +++T IKG+ I +A DM
Sbjct: 458 SAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKE 517
Query: 133 KGFQFNQVTYGVLINGLCKAGETKAALQLLRRI--EELAVQPN 173
G N+ TY +I+GLCK ET+ ++LR E + + PN
Sbjct: 518 GGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPN 560
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 91 VLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLC 150
VL ++ G++PN F +++ C G +S+A MI G + + +L++G
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 151 KAGETKAALQLLRRIEELAVQPNAV 175
++GE + A+ L ++ ++ PN V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLV 283
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
GI + V+ I I FC LG ++ A+ + + K G P+ +T+TTLI + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ M+ KG + N T+ V I L A LL + +L V+P+++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSI 283
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ +L K C L M KG PN+ T + I + R A +
Sbjct: 210 PDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDL 269
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
L + K P++IT+ +IKG A + M KG++ N Y +I+ LCK
Sbjct: 270 LLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCK 329
Query: 152 AGETKAALQLLRRIEELAVQPN 173
AG A + + PN
Sbjct: 330 AGNFDLAYTMCKDCMRKKWYPN 351
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 67/160 (41%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ + +S F ML P + +L + A ++ + M I P++ + T
Sbjct: 329 REEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYT 388
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+++ + + + A I G+ PN +T+ TLIKG ++ K M ++ M
Sbjct: 389 TMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS 448
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + NQ +++ + +AL + +E V P+
Sbjct: 449 GIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 65/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + + +S+ +M G+ P IL++ F G + A +V
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ + P+ ++TT++ + ++ A F + GF+ N VTYG LI G K
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Query: 152 AGETKAALQLLRRIEELAVQPN 173
A + + +++ ++ ++ N
Sbjct: 432 ANDVEKMMEVYEKMRLSGIKAN 453
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 67/160 (41%)
Query: 14 KADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTST 73
+ + +S F ML P + +L + A ++ + M I P++ + T
Sbjct: 336 REEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYT 395
Query: 74 ILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAK 133
+++ + + + A I G+ PN +T+ TLIKG ++ K M ++ M
Sbjct: 396 TMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS 455
Query: 134 GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G + NQ +++ + +AL + +E V P+
Sbjct: 456 GIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 65/142 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + + ++ + + +S+ +M G+ P IL++ F G + A +V
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ + P+ ++TT++ + ++ A F + GF+ N VTYG LI G K
Sbjct: 379 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Query: 152 AGETKAALQLLRRIEELAVQPN 173
A + + +++ ++ ++ N
Sbjct: 439 ANDVEKMMEVYEKMRLSGIKAN 460
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 34 ITLFGEILGSLAKKN-----HCFTVIS----------LSRQMEFKGITPNMVTSTILINC 78
+ LF E+ S K + HC + S + R +E ++ N+ T L++
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
Query: 79 FCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
+ G I+ A SV I R N++T+T +I G+ +G+ S A+ + ++MI G +
Sbjct: 434 YAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 139 QVTYGVLINGLCKAG 153
++T+ L++ C G
Sbjct: 490 EITFIGLLSACCHGG 504
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
S +I+ + G + A ++ ++ G P+ IT T ++ H G+I++A+ D++
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 132 AK-GFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
+K + YG++++ L AGET+ AL+L IEE+ +P+A
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRL---IEEMPFKPDA 716
Score = 50.1 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 65 ITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAM 124
+ +++ L+ + G A + + G PN IT+ +I + NG++ +A
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 125 HFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNA 174
M + G N +++ ++NG+ + G ++ A+ LR+++E ++PNA
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 56/115 (48%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
+ L+ +L + A+ + L M+ +G+ PN++T ++I G+++ A +
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLING 148
+ G PN I++TT++ GM NG +A+ F M G + N + V ++
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 13 HKADNTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVIS-LSRQMEFKGITPNMVT 71
+ D + M P + + +L L + ++ LS E ++ N++T
Sbjct: 191 RQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIIT 250
Query: 72 STILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMI 131
++N R + + +++ G P+ +++T +I + +G + +++ D+M
Sbjct: 251 YNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMK 310
Query: 132 AKGFQFNQVTYGVLINGLCKAGETKAALQL 161
+ + + Y LI+ L K+G+ ++ALQL
Sbjct: 311 QRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 54 ISLSRQMEFKGIT-PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
I ++R+ F IT N+++ T++I+ + G + A ++ + ++GY PN +T+ +
Sbjct: 478 IEMARRT-FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALS 536
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
H G + K + M+ + + + Y +++ L +AGE A++L++ + E
Sbjct: 537 ACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE 591
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 61 EFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEI 120
+ KG + T T +++ F GRI +SV + ++G +T+T+T+LI + +G++
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 121 SKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
AM ++M G + V+Y + L G + A ++ + + V PN
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPN 226
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M I P ++ IL++C R+ + +L + + G P+T ++ +++ + G
Sbjct: 275 EMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG 334
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAV 170
K D+MI +GF+ + Y LI LC ALQL +++ +V
Sbjct: 335 RFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSV 386
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 50.4 bits (119), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 64 GITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKA 123
GITP++VT +I C G ++ S+ + K G+ P+ I+F TL++ +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 124 MHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
D M +K N +Y + GL + + AL L+ ++ + P+
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M KG P +V T ++ FC +I A + + G PN ++ L++G+ +
Sbjct: 157 MRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM 216
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ A+ F +M+ G N T+ L++ LC+
Sbjct: 217 LDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ + K + + R+M+ GI PN + +L+ + ++ A +
Sbjct: 164 PEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAF 223
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
+L+ G+ PN TF L+ +C + +A D + KGF N
Sbjct: 224 CSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 60 MEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGE 119
M KG P +V T ++ FC +I A + + G PN ++ L++G+ +
Sbjct: 157 MRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM 216
Query: 120 ISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
+ A+ F +M+ G N T+ L++ LC+
Sbjct: 217 LDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P + ++ ++ + K + + R+M+ GI PN + +L+ + ++ A +
Sbjct: 164 PEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAF 223
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFN 138
+L+ G+ PN TF L+ +C + +A D + KGF N
Sbjct: 224 CSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 49.7 bits (117), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 54 ISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKG 113
+SL R+M+F G+ P+ T + L I SV ++ K G + +LI
Sbjct: 117 LSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMM 176
Query: 114 MCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPN 173
G++ A D++ + + V++ +I+G +AG K A+ L R++EE +P+
Sbjct: 177 YAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVT-STILINCFCHLGRINFAFSVL 92
+ ++ ++ AK L RQM + I PN T + IL++C LG + SV
Sbjct: 277 VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC-SSLGSLRHGKSVH 335
Query: 93 GNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKA 152
G +++ G + + FT+ I G I A D M + N +++ +IN
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWSSMINAFGIN 391
Query: 153 GETKAALQLLRRIEELAVQPNAV 175
G + AL +++ V PN+V
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSV 414
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 58 RQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHN 117
R+M ITPN + + +I+CF +G + + + + KRG P + +L+ +
Sbjct: 283 REMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRE 342
Query: 118 GEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLL 162
+AM + +G + + VTY +I LC+AG+ A +L
Sbjct: 343 DCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVL 387
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 33 PITLFGEILGSLAKKNHCF-TVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P T+ L S+ +NH F +S+ +M+ ++ T I+I+ + L + A +
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
++ K PN +++ T+++ +A+H M K + N VTY +I K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
E + A L++ ++ ++PNA+
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAI 436
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 63/145 (43%)
Query: 22 FLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCH 81
F + M+ P + + IL + I L R M+ K I N+VT +I +
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 82 LGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVT 141
A +++ + RG PN IT++T+I G++ +A + + G + +QV
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 142 YGVLINGLCKAGETKAALQLLRRIE 166
Y +I + G A +LL ++
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELK 497
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 32 PPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSV 91
P I + +L A K I++ ++M+ G+ P+ + + L+ G + ++
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 92 LGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCK 151
G IL+ + TTLI G + A D M AK N V + L++GL
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSY 303
Query: 152 AGETKAALQLLRRIEELAVQPNAV 175
A K A L+ R+E+ ++P+A+
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAI 327
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 55 SLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGM 114
+L +ME +GI P+ +T L + + LG+ A V+G + ++G PN +++T + G
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 115 CHNGEISKAMHFHDDMIAKGFQFNQVTYGVLI 146
NG A+ M +G N T L+
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 30 PPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAF 89
P P +++ +L A+ +SL +ME +G++P+ T T ++ L + F
Sbjct: 73 PKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 90 SVLGNILKRGY-------------HPN------------------TITFTTLIKGMCHNG 118
+ G +++ G+ H N + ++++ G G
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE 167
+I +AM D+M K +QV + V+I G K E +A +L R E
Sbjct: 193 KIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTE 237
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 53 VISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIK 112
V + +M KG+ + L+ FC G A + + K+G NTI + TL+
Sbjct: 328 VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387
Query: 113 GMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQP 172
+ I + +M KG + + TY +L++ + + LLR +E+L ++P
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 173 N 173
N
Sbjct: 448 N 448
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M+ G+ P+ + T LI+ + G A++ + K G P+ T+T+++ +G
Sbjct: 475 RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSG 534
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+ K M M+ + + ++TY L++G K G A ++ ++ +QP+ +
Sbjct: 535 DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVM 591
Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 59 QMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNG 118
+M +GI P++ T T +++ F G + +L+ IT+ TL+ G G
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 119 EISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEELAVQPNAV 175
+A + G Q + +TY +L+N + G+ QLL+ + L ++P+++
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 68 NMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFH 127
++V+ T +IN + G+ A + LK G+ P+++TF +++ H+G++ H+
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Query: 128 DDMIAKGFQFNQVT--YGVLINGLCKAGETKAALQLLRRI 165
+M+ + + YG +++ LC+AG A +++ +
Sbjct: 536 -NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 67 PNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHF 126
P+++ L++ + G I A+ + ++++ +T+++ ++I G+ H+G KA++
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNL 556
Query: 127 HDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRIEE-LAVQP 172
+M+ G + N VT+ +++ +G L+L + ++E ++QP
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 65/134 (48%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L SL + N VI++ ++M+ G ++ T I+I+C + A +++ +++ G
Sbjct: 559 VLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDG 618
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ P +TFT L+K + ++ +A++ D + + ++Y ++ + G
Sbjct: 619 FSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIE 678
Query: 160 QLLRRIEELAVQPN 173
++ ++ V P+
Sbjct: 679 YIVEQMHREKVNPD 692
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 65/134 (48%)
Query: 40 ILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRG 99
+L SL + N VI++ ++M+ G ++ T I+I+C + A +++ +++ G
Sbjct: 531 VLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDG 590
Query: 100 YHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAAL 159
+ P +TFT L+K + ++ +A++ D + + ++Y ++ + G
Sbjct: 591 FSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIE 650
Query: 160 QLLRRIEELAVQPN 173
++ ++ V P+
Sbjct: 651 YIVEQMHREKVNPD 664
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 31 PPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFS 90
P LF + + A++ C + + + ME +GI PN++ +LIN F G+ A S
Sbjct: 161 APSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALS 220
Query: 91 VLGNILKRGY-HPNTITFTTLIKG 113
+ +I + + HP+ +T++TL+K
Sbjct: 221 IYHHIKETVWIHPDVVTYSTLMKA 244
>AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11286756-11288513 REVERSE
LENGTH=551
Length = 551
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 17 NTVSSFLHMLHMNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILI 76
N + F M + P + + +LGSL K+N + L M GI + +T ++
Sbjct: 171 NGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIA 230
Query: 77 NCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQ 136
C GR F +++ G I +T L++ NGE +M K +
Sbjct: 231 QILCEQGRSKSVF----KLMETGVESCKI-YTNLVECYSRNGEFDAVFSLIHEMDDKKLE 285
Query: 137 FNQVTYGVLINGLCKAGETK 156
+ +YG +++ C+ G+ +
Sbjct: 286 LSFCSYGCVLDDACRLGDAE 305
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 58/148 (39%)
Query: 28 MNPPPPITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINF 87
M P + L+ + K L +M +GI P+ T T +I+C G
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 88 AFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLIN 147
A + G P+ +T +I G + A+ +D + ++ + VT+ LI
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 148 GLCKAGETKAALQLLRRIEELAVQPNAV 175
+G L + ++ L V+PN V
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLV 316
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 75 LINCFCHLGRINFAFSVLGNILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKG 134
+IN + GRI A S +++ G PN + F ++ H+G + + ++ + M + G
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Query: 135 FQFNQVTYGVLINGLCKAGETKAALQLLRRIEELA 169
N + I+ L ++G+ K A + ++ + LA
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 670
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 57/125 (45%)
Query: 34 ITLFGEILGSLAKKNHCFTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLG 93
I+ + +++ AK+NH V + ++M GI P+++T+T L++ + G A
Sbjct: 384 ISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFE 443
Query: 94 NILKRGYHPNTITFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAG 153
N+ G P+ + +I G + G+ +M AK + ++ Y L+ + G
Sbjct: 444 NLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMG 503
Query: 154 ETKAA 158
+ A
Sbjct: 504 DANGA 508
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 47 KNHC-FTVISLSRQMEFKGITPNMVTSTILINCFCHLGRINFAFSVLGNILKRGYHPNTI 105
KN C I L M GI P + +++ + + + G +LK G+ +T
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 106 TFTTLIKGMCHNGEISKAMHFHDDMIAKGFQFNQVTYGVLINGLCKAGETKAALQLLRRI 165
L+ H G + A H +M Q + VTY LINGL + G + A++L +R+
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMS----QRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 166 EELAVQPNA 174
++P++
Sbjct: 381 HLDGLEPDS 389