Miyakogusa Predicted Gene

Lj0g3v0109649.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109649.1 Non Chatacterized Hit- tr|I1LGQ9|I1LGQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54148
PE,51.82,0,seg,NULL,CUFF.6381.1
         (1841 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17330.1 | Symbols: ATG2484-1, G2484-1 | G2484-1 protein | ch...   297   5e-80

>AT4G17330.1 | Symbols: ATG2484-1, G2484-1 | G2484-1 protein |
            chr4:9689263-9697172 REVERSE LENGTH=2037
          Length = 2037

 Score =  297 bits (761), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 265/822 (32%), Positives = 368/822 (44%), Gaps = 104/822 (12%)

Query: 1052 IPCGSPQISD-GKLARSVCKGTPERKPRRASNKTAGKDTSRKGS--KSKTPVRQQEKGDR 1108
            I  GSP  S   K A    K   ERKPRR S K+ GK+TSRKG+  K  TP+ Q + G +
Sbjct: 835  IVVGSPSTSSLDKTAAKSSKAKSERKPRRTS-KSVGKETSRKGTSVKGATPIEQFQSGGK 893

Query: 1109 SNSVSLSPSPGFQLMQSNEVQQYGHIDSIRTKPFSLLNASTSSLPDLNSSVSPPVLFQQP 1168
            +N+V+ S +   Q+ QS E Q+   + S   K F  L+  T+SLPDLNSS    +L ++P
Sbjct: 894  TNAVNQSLASHIQITQSTEKQR--SLQSPALKAFGSLSTPTASLPDLNSSALSSIL-RRP 950

Query: 1169 FLNIQQVQLRAQIFVYGALIQSTVPDEACMISAFGGPDGGRSMWEKSWSLCRERQHGQKS 1228
            F ++QQVQLRAQIFVYGALIQ T PDEA MISAFGG DGG+  WEKSW  C  R   QKS
Sbjct: 951  FTDLQQVQLRAQIFVYGALIQGTAPDEAYMISAFGGADGGKGSWEKSWRTCVVR--AQKS 1008

Query: 1229 HPINPETPIQSRSG----PRTPDLAAKQSALLGKGI--SSPLGLASSKVTPAIVNXXXXX 1282
                PETP+QSR G    P      +K+S+     I  SSPL   S+ V           
Sbjct: 1009 LVATPETPLQSRPGKTETPSAGHTNSKESSGTNPMIPLSSPLWSLSTSV----------- 1057

Query: 1283 XXXXXXXXXXXGDSLQSTALARGSVVDYSQAPTSLHSYQTPPVRNFLGHNTSWMSQAPLR 1342
                        D+LQS+++ RGS   +    ++ H++QTPP +N +GHNT WMS  P R
Sbjct: 1058 ------------DTLQSSSVQRGSAATHQPLLSASHAHQTPPTQNIVGHNTPWMSPLPFR 1105

Query: 1343 GPWIVSPPPA-LDKGSHLSSSPVTDTNKFXXXXXXXXXXXXXIKNVQPGLPGSSAVLKSV 1401
              W+ S   +  D GS     P+TD  K               K+VQ G   SS V K  
Sbjct: 1106 NAWLASQQTSGFDVGSRFPVYPITDPVKLTPMKESSMTLSGA-KHVQSGT--SSNVSKVT 1162

Query: 1402 PVATAPPLDTNNVTVSHAQHXXXXXXXXXXXXXXXEDPGQKAMHFQSQVVMTPVASSHIY 1461
            P      L+  +  V+ AQH                + G   ++   Q   T +A+S + 
Sbjct: 1163 PT-----LEPTSTVVAPAQHSTRVKSRKRKKMPVSVESGPNILNSLKQ---TELAASPLV 1214

Query: 1462 TAVPTATPVGN--------VPITTVEKSVVSISPVSLADHLKSDW-----------NVEK 1502
               PT   +G         V +T V   +VS  P      +KS +            V++
Sbjct: 1215 PFTPTPANLGYNAGTLPSVVSMTAVPMDLVSTFP---GKKIKSSFPSPIFGGNLVREVKQ 1271

Query: 1503 R-IMSEDSLTKIMXXXXXXXXXXXXXXXXVNHSLEIWKQLDKQKNSGLVSDIEXXXXXXX 1561
            R ++SED++ K+                 V+HS  +WKQ+++Q ++GL  + +       
Sbjct: 1272 RSVLSEDTIEKLKEAKMHAEDASALATAAVSHSEYVWKQIEQQSHAGLQPETQDRLASAA 1331

Query: 1562 XXXXXXXXXXXXXXXXXXXXXXXXXQAKLMADEALILSGCESSGQISLSEGMSNLGNATP 1621
                                     QAKLMA+EA + +  +     S    +   G  TP
Sbjct: 1332 VAIAAAAAVAKAAAAAANVAANAALQAKLMAEEASLPNASDQGLPKSYDSILP--GQGTP 1389

Query: 1622 ASILKGAKGTNSSSSIIGAAKEXXXXXXXXXXXXXKRAENMDXXXXXXXXXXXXXXXXGK 1681
            ASILKG     +SSS++ AA+E             KRAENMD                G 
Sbjct: 1390 ASILKGEGAVVNSSSVLIAAREASKKRVEAATAATKRAENMDSIVKAAELASEAVSQAGI 1449

Query: 1682 IVTMGDPLQLSELVEAGPEGCWKAAAQESSQQVGLLRGMTGGLINIHNVGDRLETSHVGN 1741
            +V+MG P  L++LVEAGP   W+ A  + SQ+V   + +                     
Sbjct: 1450 LVSMGHPPLLNKLVEAGPSNYWRQA--QESQEVQPCKTV--------------------- 1486

Query: 1742 QDISSKETGKQIAATDKSPFHVVHKEILH--DHIDGISSATNITEKSSKGPKGRKISNLV 1799
              +  KET      T   P  +V  E     +  DG+S     T K  KG +G K ++L 
Sbjct: 1487 --VLEKETVSTSEGTFAGP-KIVQTEFGGSVNTADGVSGPVPATGK-LKGQEGDKYADLA 1542

Query: 1800 NPIGVLPQSETEIHASSNVGDGSENLEDNKIKEGSLVEFFKD 1841
                V+ + E     S +     +  ++  IKEGS VE FK+
Sbjct: 1543 KNNDVVFEPEVGSKFSIDAQQTIKATKNEDIKEGSNVEVFKE 1584



 Score =  201 bits (510), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 91/162 (56%), Positives = 112/162 (69%)

Query: 1   MDYDDNDFQSQNLHLAGEGNTKFPPVLRPYALPKFDFDESLQGHLRFDSLVETEVFVGIE 60
           MDYDD+DFQ+QNLHLAGE N KFPPVL+PYALPKFDFD++L  HLRFDSL E+E F+GIE
Sbjct: 1   MDYDDSDFQNQNLHLAGEANNKFPPVLQPYALPKFDFDDTLNTHLRFDSLGESEAFLGIE 60

Query: 61  SNEDNQWIDAYSRGRSGIEFSSTAAETCSISRHNNXXXXXXXXXXXXMLLKSVGQEEFIP 120
            NEDN WI+ +SRG SGI FSS A E+C+ISRHNN            MLL SVGQ+E I 
Sbjct: 61  GNEDNNWIEDFSRGSSGIVFSSGATESCAISRHNNVWSEATSSESVAMLLNSVGQDEVIV 120

Query: 121 SEAVLQESDACDELACLAKQMEPNLNPDKENEFKDNATDFQP 162
            E  +++SD   EL C  + +EP     + +  K+   + QP
Sbjct: 121 REDTIKKSDTSHELGCTMETVEPGQTSHERSLSKEETVNLQP 162