Miyakogusa Predicted Gene

Lj0g3v0109619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109619.1 Non Chatacterized Hit- tr|I1MJ16|I1MJ16_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57062
PE,81.65,0,DUF572,CWC16 protein; coiled-coil,NULL; seg,NULL; SUBFAMILY
NOT NAMED,NULL; CELL CYCLE CONTROL PROTE,CUFF.6304.1
         (312 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17130.1 | Symbols:  | Family of unknown function (DUF572)  |...   370   e-103
AT1G17130.2 | Symbols:  | Family of unknown function (DUF572)  |...   363   e-100
AT2G32050.1 | Symbols:  | Family of unknown function (DUF572)  |...   238   3e-63
AT3G43250.1 | Symbols:  | Family of unknown function (DUF572)  |...   215   3e-56
AT2G29430.1 | Symbols:  | Family of unknown function (DUF572)  |...   102   3e-22
AT1G25682.1 | Symbols:  | Family of unknown function (DUF572)  |...    82   5e-16

>AT1G17130.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:5854264-5856472 FORWARD LENGTH=331
          Length = 331

 Score =  370 bits (949), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/333 (62%), Positives = 236/333 (70%), Gaps = 24/333 (7%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPAKL R RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           ED IGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGA+RN+EPWRAEDE  DK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEEVDK 120

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTX 180
            K+KR+AEE+GDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHATVSVD ML ALQRT 
Sbjct: 121 DKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAMLEALQRTG 180

Query: 181 XXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVS-------DVHGETSN 233
                         IKS IF   +  ++R+ DE+I+ D +   +        +  G +S+
Sbjct: 181 AEKVKRIEEEDEAVIKS-IFGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEKKGSSSD 239

Query: 234 YNPKRQKVSEDLPGKATDSLTKASLDDSGKQENSRPSGGKLHSLVKISVIKK---PMASD 290
            + KR K +E  P   TD LT +S ++  + +    S     S V I VIKK   P +S 
Sbjct: 240 LSKKR-KATEVSPSNPTDILTSSSAENPKEPKKQAISKQPFKS-VHIKVIKKQPQPTSSS 297

Query: 291 VKSDAEP----------GGLQSLCQ-YGSDEDE 312
             + A+P            L SL Q YGSDEDE
Sbjct: 298 TPAPAKPEEKKSDGAANTSLASLFQNYGSDEDE 330


>AT1G17130.2 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:5854264-5856472 FORWARD LENGTH=338
          Length = 338

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/340 (61%), Positives = 236/340 (69%), Gaps = 31/340 (9%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPAKL R RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDCIGE-------TYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRA 113
           ED IGE       TYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGA+RN+EPWRA
Sbjct: 61  EDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRA 120

Query: 114 EDEVADKMKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEML 173
           EDE  DK K+KR+AEE+GDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHATVSVD ML
Sbjct: 121 EDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAML 180

Query: 174 AALQRTXXXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVS-------D 226
            ALQRT               IKS IF   +  ++R+ DE+I+ D +   +        +
Sbjct: 181 EALQRTGAEKVKRIEEEDEAVIKS-IFGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKE 239

Query: 227 VHGETSNYNPKRQKVSEDLPGKATDSLTKASLDDSGKQENSRPSGGKLHSLVKISVIKK- 285
             G +S+ + KR K +E  P   TD LT +S ++  + +    S     S V I VIKK 
Sbjct: 240 KKGSSSDLSKKR-KATEVSPSNPTDILTSSSAENPKEPKKQAISKQPFKS-VHIKVIKKQ 297

Query: 286 --PMASDVKSDAEP----------GGLQSLCQ-YGSDEDE 312
             P +S   + A+P            L SL Q YGSDEDE
Sbjct: 298 PQPTSSSTPAPAKPEEKKSDGAANTSLASLFQNYGSDEDE 337


>AT2G32050.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr2:13637879-13638643 REVERSE LENGTH=254
          Length = 254

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 133/261 (50%), Positives = 168/261 (64%), Gaps = 20/261 (7%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPP+FDP ++PR R+PKNQQ K+R M+P+ IRCNTCGNY+ +GTK N R+
Sbjct: 1   MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           E+ IGETYLGI+I RFYFKC+KC  EL +KTDP+NS Y+ ESGAT           V D+
Sbjct: 61  ENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGATC----------VYDQ 110

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTX 180
            +E+ +AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VSVD ML  L +  
Sbjct: 111 HEEEEQAEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLEDLSKRH 170

Query: 181 XXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVSDVHGETSN-YNPKRQ 239
                         IKS  F    G  +R+ DE+    +E  +   V  E  +   PK +
Sbjct: 171 KEEEEVAKEEDAALIKSTKF----GKQRRIVDEET---DEMEKTKKVRMEAVDEKKPKTK 223

Query: 240 KVS--EDLPGKATDSLTKASL 258
           K++    L  K T SL  ASL
Sbjct: 224 KLACIITLKKKKTTSLGLASL 244


>AT3G43250.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr3:15216713-15217462 FORWARD LENGTH=249
          Length = 249

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 103/178 (57%), Positives = 137/178 (76%), Gaps = 8/178 (4%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPPDFDP K+ R ++PKNQQ K+R MLP+ +RCNTCGNY+ +GTKFN R+
Sbjct: 1   MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           ED I ETYLG++I RFY KCTKC AELT+KTDP+N  Y VESGA+     +   +++   
Sbjct: 61  EDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASC---LYNGHEDIE-- 115

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQR 178
              + + ++  +A++SLENRT+ SKRE++++A+LDE+KSMKSR A++SVD ML  L R
Sbjct: 116 ---EEKKKKHENALESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDYMLEDLSR 170


>AT2G29430.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr2:12619700-12619954 FORWARD LENGTH=84
          Length = 84

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 56/74 (75%)

Query: 37  LPMSIRCNTCGNYIYKGTKFNSRKEDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNS 96
           LPM ++CN C N + KGTKF SR ED IGETYLGI+IFRF  +CT  S E+  +TDP+N+
Sbjct: 10  LPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRTDPKNA 69

Query: 97  DYIVESGATRNFEP 110
           D+I+ESGATR   P
Sbjct: 70  DFIIESGATRLLLP 83


>AT1G25682.1 | Symbols:  | Family of unknown function (DUF572)  |
           chr1:9002532-9004550 REVERSE LENGTH=310
          Length = 310

 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 15/171 (8%)

Query: 8   NKYYPPDFDP---------AKLP---RARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTK 55
           N YYPP++ P          + P   RA++     + +R  +P +I C  C + I KG +
Sbjct: 11  NFYYPPEWTPDQGSLNKFQGQHPLRERAKKIGEGILVIRFEMPYNIWCGGCSSMIAKGVR 70

Query: 56  FNSRKEDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAED 115
           FN+ K+  +G  Y   +I+ F  K   C  E+ ++TDPQN +Y++ SGA +  E + AED
Sbjct: 71  FNAEKKQ-VG-NYYSTKIWSFAMKSPCCKHEIVIQTDPQNCEYVITSGAQKKVEEYEAED 128

Query: 116 EVADKMKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMK-SRHA 165
               ++  ++E  ++ D    LE++ +D +++      L  ++ +  +RHA
Sbjct: 129 AETMELTAEQEKGKLADPFYRLEHQEVDLQKKKAAEPLLVRLQRVSDARHA 179