Miyakogusa Predicted Gene
- Lj0g3v0108779.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0108779.1 Non Chatacterized Hit- tr|I1K5H3|I1K5H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44868
PE,82.78,0,Thoc2,THO complex, subunitTHOC2, N-terminal; SUBFAMILY NOT
NAMED,NULL; THO2 PROTEIN,NULL; coiled-coi,gene.g8227.t1.1
(629 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G24706.2 | Symbols: THO2 | THO2 | chr1:8742210-8755250 FORWAR... 843 0.0
AT1G24706.1 | Symbols: THO2, AtTHO2 | THO2 | chr1:8742210-875524... 842 0.0
>AT1G24706.2 | Symbols: THO2 | THO2 | chr1:8742210-8755250 FORWARD
LENGTH=1823
Length = 1823
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/633 (66%), Positives = 493/633 (77%), Gaps = 50/633 (7%)
Query: 1 MSFPAIERVYVTEDCVREWKTGNAALK------------------VRGELPLHKCKTALD 42
MS P +E YVTE+ VRE K GN K VRGELP+ CK L+
Sbjct: 1 MSLPLLECKYVTEEFVREGKNGNYGTKLPSSVPMLRFLYELSWILVRGELPIQSCKAVLE 60
Query: 43 SVIFSEKASPDKIASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESDLVPVRLLHERC 102
V F +K S +++AS FAD+VTQ+AQD TMSG+ RSRLIKLA+WLVES VP RL ERC
Sbjct: 61 GVEFLDKPSREELASCFADVVTQIAQDLTMSGDQRSRLIKLAKWLVESQTVPQRLFQERC 120
Query: 103 EEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKL----------- 151
EEEFL EA+++KIKAQ+LKGKEVR+NTRLLYQQTKFNLLREESEGYAKL
Sbjct: 121 EEEFLWEADMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLATLLCRGSASS 180
Query: 152 -------------SLIGHFDLDPNRVFDIVLECFELQPNNDVFIELIPIFPKSHASQILG 198
SLIGHFDLDPNRVFDIVL+CFEL+ + D F+ LIPIFPKSHASQILG
Sbjct: 181 SHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILG 240
Query: 199 FKFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRF 258
FKFQYYQR+EV++PVP GLY+LTALLVK++FI+L+SIYAHLLPKD+E FE YN S+KRF
Sbjct: 241 FKFQYYQRLEVNSPVPVGLYKLTALLVKEEFINLESIYAHLLPKDEEVFEDYNVSSAKRF 300
Query: 259 DEANKIGRINLAATGKDLMDEEKQGDVTKDLFAALDTETEAIEERMSELQDSQTLGLLTG 318
+EANKIG+INLAATGKDLM++EKQGDVT DLFAALD E+EA+ ER+ EL+++QTLGLL G
Sbjct: 301 EEANKIGKINLAATGKDLMEDEKQGDVTVDLFAALDMESEAVTERLPELENNQTLGLLNG 360
Query: 319 FLAVDDWYHAHILFERLSTLNAVEHTQICDSLFRLIEKSISSAYDVIRQAHVQNPGSSTG 378
FL+VDDWYHA+ILFERL+ LN V H QIC LFRLIEKSI+ +Y + RQ Q+ SS+
Sbjct: 361 FLSVDDWYHANILFERLAPLNPVAHDQICSGLFRLIEKSITHSYRIARQTRFQS--SSSA 418
Query: 379 GSTDAMDVDNSSGHGSFINLPKELFQMLACTGPYLYRDTMLLQKVHKVCRVLRGYYLSAL 438
+ N++ + ++++LPKE+FQML GPYLYR+T LLQ K+CRVLR YYLSAL
Sbjct: 419 STVKLTPTANTTANRTYLDLPKEVFQMLVTVGPYLYRNTQLLQ---KICRVLRAYYLSAL 475
Query: 439 ELVNRGNGALNPQSHVTGSPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELM 498
+LV G+ V+ HLK+ RLRVE+ALG CLLPSLQL+PANPAVG EIWE+M
Sbjct: 476 DLVRDGSNQEGSAYEVSRG---HLKEVRLRVEEALGTCLLPSLQLVPANPAVGHEIWEVM 532
Query: 499 SLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENVKQLGRMVAKLAH 558
SLLPYE RYRLYGEWEKDDE+ P+LLAARQ AKLDTRRILKRLAKEN+KQLGRMVAKLAH
Sbjct: 533 SLLPYEARYRLYGEWEKDDEQNPLLLAARQVAKLDTRRILKRLAKENLKQLGRMVAKLAH 592
Query: 559 ANPMTVLHTIVHQIEAYRDMITPVVDAFKYLTQ 591
ANPMTVL TIV+QIEAYRDMI PVVDAFKYLTQ
Sbjct: 593 ANPMTVLRTIVNQIEAYRDMIAPVVDAFKYLTQ 625
>AT1G24706.1 | Symbols: THO2, AtTHO2 | THO2 | chr1:8742210-8755243
FORWARD LENGTH=1804
Length = 1804
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/633 (66%), Positives = 493/633 (77%), Gaps = 50/633 (7%)
Query: 1 MSFPAIERVYVTEDCVREWKTGNAALK------------------VRGELPLHKCKTALD 42
MS P +E YVTE+ VRE K GN K VRGELP+ CK L+
Sbjct: 1 MSLPLLECKYVTEEFVREGKNGNYGTKLPSSVPMLRFLYELSWILVRGELPIQSCKAVLE 60
Query: 43 SVIFSEKASPDKIASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESDLVPVRLLHERC 102
V F +K S +++AS FAD+VTQ+AQD TMSG+ RSRLIKLA+WLVES VP RL ERC
Sbjct: 61 GVEFLDKPSREELASCFADVVTQIAQDLTMSGDQRSRLIKLAKWLVESQTVPQRLFQERC 120
Query: 103 EEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKL----------- 151
EEEFL EA+++KIKAQ+LKGKEVR+NTRLLYQQTKFNLLREESEGYAKL
Sbjct: 121 EEEFLWEADMVKIKAQDLKGKEVRLNTRLLYQQTKFNLLREESEGYAKLATLLCRGSASS 180
Query: 152 -------------SLIGHFDLDPNRVFDIVLECFELQPNNDVFIELIPIFPKSHASQILG 198
SLIGHFDLDPNRVFDIVL+CFEL+ + D F+ LIPIFPKSHASQILG
Sbjct: 181 SHNASAATMGIIKSLIGHFDLDPNRVFDIVLDCFELEQDYDTFLNLIPIFPKSHASQILG 240
Query: 199 FKFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRF 258
FKFQYYQR+EV++PVP GLY+LTALLVK++FI+L+SIYAHLLPKD+E FE YN S+KRF
Sbjct: 241 FKFQYYQRLEVNSPVPVGLYKLTALLVKEEFINLESIYAHLLPKDEEVFEDYNVSSAKRF 300
Query: 259 DEANKIGRINLAATGKDLMDEEKQGDVTKDLFAALDTETEAIEERMSELQDSQTLGLLTG 318
+EANKIG+INLAATGKDLM++EKQGDVT DLFAALD E+EA+ ER+ EL+++QTLGLL G
Sbjct: 301 EEANKIGKINLAATGKDLMEDEKQGDVTVDLFAALDMESEAVTERLPELENNQTLGLLNG 360
Query: 319 FLAVDDWYHAHILFERLSTLNAVEHTQICDSLFRLIEKSISSAYDVIRQAHVQNPGSSTG 378
FL+VDDWYHA+ILFERL+ LN V H QIC LFRLIEKSI+ +Y + RQ Q+ SS+
Sbjct: 361 FLSVDDWYHANILFERLAPLNPVAHDQICSGLFRLIEKSITHSYRIARQTRFQS--SSSA 418
Query: 379 GSTDAMDVDNSSGHGSFINLPKELFQMLACTGPYLYRDTMLLQKVHKVCRVLRGYYLSAL 438
+ N++ + ++++LPKE+FQML GPYLYR+T LLQ K+CRVLR YYLSAL
Sbjct: 419 STVKLTPTANTTANRTYLDLPKEVFQMLVTVGPYLYRNTQLLQ---KICRVLRAYYLSAL 475
Query: 439 ELVNRGNGALNPQSHVTGSPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELM 498
+LV G+ V+ HLK+ RLRVE+ALG CLLPSLQL+PANPAVG EIWE+M
Sbjct: 476 DLVRDGSNQEGSAYEVSRG---HLKEVRLRVEEALGTCLLPSLQLVPANPAVGHEIWEVM 532
Query: 499 SLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENVKQLGRMVAKLAH 558
SLLPYE RYRLYGEWEKDDE+ P+LLAARQ AKLDTRRILKRLAKEN+KQLGRMVAKLAH
Sbjct: 533 SLLPYEARYRLYGEWEKDDEQNPLLLAARQVAKLDTRRILKRLAKENLKQLGRMVAKLAH 592
Query: 559 ANPMTVLHTIVHQIEAYRDMITPVVDAFKYLTQ 591
ANPMTVL TIV+QIEAYRDMI PVVDAFKYLTQ
Sbjct: 593 ANPMTVLRTIVNQIEAYRDMIAPVVDAFKYLTQ 625