Miyakogusa Predicted Gene

Lj0g3v0108699.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108699.2 tr|B9IDU8|B9IDU8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_574781 PE=4
SV=1,78,0.000000000000003,seg,NULL; PROTEIN_KINASE_DOM,Protein kinase,
catalytic domain; Pkinase,Protein kinase, catalytic dom,CUFF.6253.2
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53450.2 | Symbols: ORG1 | OBP3-responsive gene 1 | chr5:2168...   238   9e-64
AT5G53450.1 | Symbols: ORG1 | OBP3-responsive gene 1 | chr5:2168...   238   1e-63

>AT5G53450.2 | Symbols: ORG1 | OBP3-responsive gene 1 |
           chr5:21689444-21692242 FORWARD LENGTH=590
          Length = 590

 Score =  238 bits (608), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 116/160 (72%), Positives = 130/160 (81%), Gaps = 1/160 (0%)

Query: 1   MQVHGYISLPESNDSGSFILVHGYHGSFSLRHWLQRSDWLPTLEATLALDEESVRKIGED 60
           MQVHGYI+   S+D  SF LVHG HGSFS+RHWLQ+SDW+PTLEATLALDEES R++G+D
Sbjct: 79  MQVHGYITNNLSDDQYSFTLVHGCHGSFSIRHWLQQSDWIPTLEATLALDEESFRRVGDD 138

Query: 61  TTGGPAVSRQXXXXXXXXXXXXXGVNYLHSHGFAHTELRLENVHISPIDRHIKVGILGNA 120
           TTGGPAVSRQ             GVNYLHSHG AHTELRLENVHISP+DRHIKVGILGNA
Sbjct: 139 TTGGPAVSRQLRLIRTLMRDILIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNA 198

Query: 121 ADFHVE-GSNSGTMDSMDRRQMMIAFDMRCVGFIMAKMVI 159
           ADF+ +  S S    +MDRRQMMIAFDMRCVGF+MAKMV+
Sbjct: 199 ADFNGDVPSTSNAYSTMDRRQMMIAFDMRCVGFMMAKMVL 238


>AT5G53450.1 | Symbols: ORG1 | OBP3-responsive gene 1 |
           chr5:21689204-21692242 FORWARD LENGTH=670
          Length = 670

 Score =  238 bits (608), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 116/160 (72%), Positives = 130/160 (81%), Gaps = 1/160 (0%)

Query: 1   MQVHGYISLPESNDSGSFILVHGYHGSFSLRHWLQRSDWLPTLEATLALDEESVRKIGED 60
           MQVHGYI+   S+D  SF LVHG HGSFS+RHWLQ+SDW+PTLEATLALDEES R++G+D
Sbjct: 159 MQVHGYITNNLSDDQYSFTLVHGCHGSFSIRHWLQQSDWIPTLEATLALDEESFRRVGDD 218

Query: 61  TTGGPAVSRQXXXXXXXXXXXXXGVNYLHSHGFAHTELRLENVHISPIDRHIKVGILGNA 120
           TTGGPAVSRQ             GVNYLHSHG AHTELRLENVHISP+DRHIKVGILGNA
Sbjct: 219 TTGGPAVSRQLRLIRTLMRDILIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNA 278

Query: 121 ADFHVE-GSNSGTMDSMDRRQMMIAFDMRCVGFIMAKMVI 159
           ADF+ +  S S    +MDRRQMMIAFDMRCVGF+MAKMV+
Sbjct: 279 ADFNGDVPSTSNAYSTMDRRQMMIAFDMRCVGFMMAKMVL 318