Miyakogusa Predicted Gene

Lj0g3v0108549.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108549.2 tr|E9C9C1|E9C9C1_CAPO3 Predicted protein
OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_04762
,23.19,0.000000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; no description,Armadillo-like helical;
HE,CUFF.6242.2
         (422 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16210.1 | Symbols:  | HEAT repeat-containing protein | chr5:...   508   e-144

>AT5G16210.1 | Symbols:  | HEAT repeat-containing protein |
            chr5:5290999-5297779 REVERSE LENGTH=1180
          Length = 1180

 Score =  508 bits (1309), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 265/439 (60%), Positives = 326/439 (74%), Gaps = 29/439 (6%)

Query: 1    MHVECFPKLIQLACLLPWKEDNLRSRISKFLLSVSERFGDPYVTCIMLPVFLTAVGDD-A 59
            MHV+CF  L+QLAC+LP KED+LR+RI+KFLL+VSERFG  Y+T I LPVFL A GDD A
Sbjct: 744  MHVDCFANLLQLACMLPQKEDHLRNRITKFLLAVSERFGSSYLTHIELPVFLVAAGDDEA 803

Query: 60   DLTFFPSAIRSRIEGLRPRSEISERLCTLCVXXXXXXXXXXXXXKREQFAEYLRKLLLKD 119
            DL F PSAI  RI+GL+PR+ ++ RL TLC+             KRE+   +LR+LL++ 
Sbjct: 804  DLRFLPSAIHPRIKGLKPRTAVANRLATLCILPLLLAGVLGAPSKREELTIFLRQLLVES 863

Query: 120  NFKENASTKNTPEIINAIRFICIYEENHGMIFEILWEMVVSTNVNIKINAAKLLKAIVPY 179
              KEN S+K+  E+++A+RF+C +E +H MIF ILWEMVV +   +KINAAKLLK IVPY
Sbjct: 864  KTKENQSSKHNNEVLDAVRFLCTFEVHHNMIFGILWEMVVDSTAELKINAAKLLKTIVPY 923

Query: 180  IDAKVASAHALPALVTLGSDQNLNVKGASIDAFGAVAQHFKNEMIVDKIRVQMGAFLEDG 239
            IDAKVASA+ LPAL+TLGSDQNLNVK ASIDAFG+VAQHFK +MIVDKI VQM AF+EDG
Sbjct: 924  IDAKVASANVLPALITLGSDQNLNVKYASIDAFGSVAQHFKVDMIVDKILVQMDAFMEDG 983

Query: 240  SHETTIAVIHALVVAIPHTTEQLRDYLLSKISQLTAVTTAASSDVMRRQERANAFCEAIR 299
            SHE  IAVI AL+VAIPHTTE+LRDYLLSKI QL+A + ++S+DV RR+ERANAFCEAIR
Sbjct: 984  SHEAIIAVIRALLVAIPHTTERLRDYLLSKILQLSA-SPSSSTDVNRRRERANAFCEAIR 1042

Query: 300  ALDATDLPANSIQDFLLPAIQNLLKDSDALDPAHREALEIIMKEXXXXXXXXXXXXKVMG 359
            ALDATDL   S++++LLPAIQNLLKD DALDPAH+EALEIIMKE            K MG
Sbjct: 1043 ALDATDLSQTSVKEYLLPAIQNLLKDPDALDPAHKEALEIIMKE--RSGGTFEAISKAMG 1100

Query: 360  --------LSNFFGER---GKKDSTEAPSERVVSPRAATSQVP---------AEDTRFRR 399
                    +++ FGE    GKK++TE+      +P + T Q P         +EDTRFRR
Sbjct: 1101 AHLGIASSVTSLFGEGGLLGKKEATES-----TAPGSPTGQGPESPKVVAAASEDTRFRR 1155

Query: 400  IMLGHFGEILRGKGKSQEE 418
            IM G+F E+LR K K+Q+E
Sbjct: 1156 IMRGNFTEMLRSKAKTQDE 1174