Miyakogusa Predicted Gene

Lj0g3v0108079.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108079.2 Non Chatacterized Hit- tr|A9P1V8|A9P1V8_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,37.59,0.000000000000003,SMALL HEAT-SHOCK PROTEIN,NULL; SMALL
HEAT-SHOCK PROTEIN (HSP20) FAMILY,NULL; HSP20,Alpha
crystallin/,CUFF.6200.2
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54660.1 | Symbols:  | HSP20-like chaperones superfamily prot...   218   2e-57
AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily prot...    54   8e-08
AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones superfa...    50   1e-06
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    49   2e-06
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    48   3e-06

>AT5G54660.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:22203950-22204986 FORWARD LENGTH=192
          Length = 192

 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/182 (57%), Positives = 136/182 (74%), Gaps = 6/182 (3%)

Query: 2   ASSSKKIEVTTDDQTPRKWCVSLGEDNFKRFFNQANPTVHKVFGDGSLFSPMLFGKFFDP 61
           +S S K+E+ TDD+TP KW V LG+D F+RF +    +   VFG+GSLFSP LFGK+FDP
Sbjct: 4   SSGSLKLEIHTDDKTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDP 63

Query: 62  SDAFPLWEFESDVLLSHLRSSNQSTVDWHQRDDGYLLKAEIPGTGKNHIEVHVDHKGKVV 121
           SDAFPLWEFE++VLL+ LRS  Q  VDW Q D  Y+LK++IP  GKN+++V+VD  G+V+
Sbjct: 64  SDAFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVM 123

Query: 122 EISGQW---KQQRDSNDWRCGHWWDCGYVRRIEMPEDADWKNIEAYLYND---TFLEIRI 175
           EISGQW   K+   ++DWR G WW+ GYVRR+E+P DAD K  EA+L N+   +FLEIRI
Sbjct: 124 EISGQWNSNKKAATNSDWRSGRWWEHGYVRRLELPSDADAKYSEAFLSNNDDYSFLEIRI 183

Query: 176 PK 177
           PK
Sbjct: 184 PK 185


>AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19980510-19980983 FORWARD LENGTH=157
          Length = 157

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 4/121 (3%)

Query: 59  FDPSDAFPLWEFESDVLLSHLRSSNQSTVDWHQRDDGYLLKAEIPGTGKNHIEVHVDHKG 118
           FDP + F      ++     + +   + VDW +  + ++ KA++PG  K  ++V V+  G
Sbjct: 24  FDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVED-G 82

Query: 119 KVVEISGQWKQQRDSND--WRCGHWWDCGYVRRIEMPEDADWKNIEAYLYNDTFLEIRIP 176
            +++ISG+   + +  +  W         + RR  +PE+A  + I+A + N   L + +P
Sbjct: 83  NILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGV-LSVTVP 141

Query: 177 K 177
           K
Sbjct: 142 K 142


>AT4G10250.1 | Symbols: ATHSP22.0 | HSP20-like chaperones
           superfamily protein | chr4:6370537-6371124 FORWARD
           LENGTH=195
          Length = 195

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 26/153 (16%)

Query: 47  GSLFSPMLFGKFFDP---SDAFPL-WEFESDVLLSHLRSSNQSTVDWHQRDDGYLLKAEI 102
           GSL S +   +F DP    +  PL  E ++ V LS  R      VDW +  +G+ +  +I
Sbjct: 35  GSLLSDLWLDRFPDPFKILERIPLGLERDTSVALSPAR------VDWKETAEGHEIMLDI 88

Query: 103 PGTGKNHIEVHVDHKGKVVEISGQWKQQRDSN-------DWRCGHWWDCGYVRRIEMPED 155
           PG  K+ +++ V+  G V+ +SG+ K++ +         +   G +W     R+ ++P++
Sbjct: 89  PGLKKDEVKIEVEENG-VLRVSGERKREEEKKGDQWHRVERSYGKFW-----RQFKLPDN 142

Query: 156 ADWKNIEAYLYNDTF---LEIRIPKKQQGCDVA 185
            D ++++A L N      L    P+K +G  V 
Sbjct: 143 VDMESVKAKLENGVLTINLTKLSPEKVKGPRVV 175


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 16/152 (10%)

Query: 52  PMLFG------KFFDPS-----DAFPLWEFESDVLLSHLRSSNQSTVDWHQRDDGYLLKA 100
           P  FG        FDP      D F   +F S  L     +   + VDW +  + ++ KA
Sbjct: 5   PSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSS-LSGETSAITNARVDWKETAEAHVFKA 63

Query: 101 EIPGTGKNHIEVHVDHKGKVVEISGQ--WKQQRDSNDWRCGHWWDCGYVRRIEMPEDADW 158
           ++PG  K  ++V ++    V++ISG+   +++   + W         + R+ ++PE+   
Sbjct: 64  DLPGMKKEEVKVEIEDDS-VLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKM 122

Query: 159 KNIEAYLYNDTFLEIRIPKKQQGCDVAQGKNV 190
             ++A + N   L + +PK ++    AQ K++
Sbjct: 123 DQVKASMENGV-LTVTVPKVEEAKKKAQVKSI 153


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 85  STVDWHQRDDGYLLKAEIPGTGKNHIEVHVDHKGKVVEISGQ--WKQQRDSNDWRCGHWW 142
           + VDW +  + ++ KA++PG  K  ++V ++    V++ISG+   +++   + W      
Sbjct: 46  ARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDS-VLKISGERHVEKEEKQDTWHRVERS 104

Query: 143 DCGYVRRIEMPEDADWKNIEAYLYNDTFLEIRIPKKQQGCDVAQGKNV 190
             G+ R+  +PE+     ++A + N   L + +PK +     AQ K++
Sbjct: 105 SGGFSRKFRLPENVKMDQVKASMENGV-LTVTVPKVETNKKKAQVKSI 151