Miyakogusa Predicted Gene
- Lj0g3v0107819.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0107819.2 Non Chatacterized Hit- tr|J3MXH8|J3MXH8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,27.27,0.00000000002,no description,Zinc finger,
RING/FYVE/PHD-type; ZF_RING_1,Zinc finger, RING-type, conserved site;
OS,CUFF.6173.2
(327 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14250.1 | Symbols: | RING/U-box superfamily protein | chr3:... 200 1e-51
AT3G53690.1 | Symbols: | RING/U-box superfamily protein | chr3:... 176 2e-44
AT4G19670.2 | Symbols: | RING/U-box superfamily protein | chr4:... 113 2e-25
AT4G19670.1 | Symbols: | RING/U-box superfamily protein | chr4:... 113 2e-25
AT5G37560.1 | Symbols: | RING/U-box superfamily protein | chr5:... 113 2e-25
AT3G45470.1 | Symbols: | IBR domain containing protein | chr3:1... 110 1e-24
AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 110 2e-24
AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 108 7e-24
AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 106 2e-23
AT2G25370.2 | Symbols: | RING/U-box superfamily protein | chr2:... 105 6e-23
AT2G25370.1 | Symbols: | RING/U-box superfamily protein | chr2:... 104 9e-23
AT2G21420.1 | Symbols: | IBR domain containing protein | chr2:9... 103 2e-22
AT2G25360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 100 1e-21
AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 100 2e-21
AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 96 4e-20
AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 90 2e-18
AT2G19610.2 | Symbols: | RING/U-box superfamily protein | chr2:... 89 4e-18
AT2G19610.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 2e-15
AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 78 8e-15
AT3G45460.1 | Symbols: | IBR domain containing protein | chr3:1... 76 2e-14
AT3G45555.1 | Symbols: | RING/U-box protein | chr3:16712368-167... 74 1e-13
AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily p... 71 1e-12
AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing prot... 70 2e-12
AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily pro... 70 2e-12
AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily pro... 69 4e-12
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | c... 69 4e-12
AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-1... 69 5e-12
AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily p... 66 3e-11
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 65 7e-11
AT5G07640.1 | Symbols: | RING/U-box superfamily protein | chr5:... 63 2e-10
AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily pro... 63 3e-10
AT3G45510.1 | Symbols: | RING/U-box protein | chr3:16690790-166... 63 3e-10
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 62 4e-10
AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing prot... 62 6e-10
AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 60 2e-09
AT5G63760.2 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT5G63760.1 | Symbols: ARI15, ATARI15 | RING/U-box superfamily p... 54 1e-07
AT3G27720.1 | Symbols: ARI4, ATARI4 | IBR domain containing prot... 50 3e-06
>AT3G14250.1 | Symbols: | RING/U-box superfamily protein |
chr3:4745963-4746958 REVERSE LENGTH=303
Length = 303
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 126/208 (60%), Gaps = 5/208 (2%)
Query: 119 RCLCGICFDYKKDSEMFRGSK-CEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGP 177
R LC IC D K S++FRG+ C H +C+DC ++VA +I++N ++ CP+ C + P
Sbjct: 92 RRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEP 151
Query: 178 EHLNLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMV--DDGGEIVTNAECPSCH 235
++PK+V RWE + CESLI+ K YCPFK+CS +MV ++G VT EC SCH
Sbjct: 152 YTCRDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDANVTQTECRSCH 211
Query: 236 RLFCAQCMVPWHAGMNCEEFQKSGRV--KGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRR 293
RLFC QC V WHAG+ C+EFQ+ G K ++ W+RCP C FYV +
Sbjct: 212 RLFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCPSCKFYVDKV 271
Query: 294 SGCEHMKCRCGCNFCYECGKDWKHGHIC 321
GC+H+KCRCG FCY CG W H C
Sbjct: 272 EGCQHIKCRCGYQFCYGCGSVWSSSHAC 299
>AT3G53690.1 | Symbols: | RING/U-box superfamily protein |
chr3:19898997-19900044 REVERSE LENGTH=320
Length = 320
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 118/203 (58%), Gaps = 5/203 (2%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C IC D K E FR C H +C+DC+SK++AA++Q N L + CP C L P+
Sbjct: 115 CEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCR 174
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEI-VTNAECPSCHRLFCA 240
ILPKEV RW CE+++ +K YCP+K+CS L+ + E+ + ++ECP CHR+ C
Sbjct: 175 QILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKMKDSECPHCHRMVCV 234
Query: 241 QCMVPWHAGMNCEEFQK-SGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEHM 299
+C WH M CEEFQK + +G +D W+RCP C FY+++ GC +M
Sbjct: 235 ECGTQWHPEMTCEEFQKLAANERGRDD--ILLATMAKQKKWKRCPSCKFYIEKSQGCLYM 292
Query: 300 KCRCGCNFCYECGKDWK-HGHIC 321
KCRCG FCY CG + H H C
Sbjct: 293 KCRCGLAFCYNCGTPSRDHTHYC 315
>AT4G19670.2 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C IC + + SEM KC H FCS C+ +V +++ + + + CP C L
Sbjct: 207 CSICCE-DRQSEMMLSLKCTHKFCSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECK 265
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTN------------- 228
LP +E S G K YCP+ NCS L+ D E +++
Sbjct: 266 SFLPVTTFKSFEEANVCSKNNG--KIYCPYPNCSFLL--DPQECLSSGRASSSSSTQSEN 321
Query: 229 ---AECPSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPK 285
ECP C R C C VPWHA M+CEEFQ V W+RC +
Sbjct: 322 SCCVECPVCERFVCVDCGVPWHASMSCEEFQILP-VDERYPDDITLHRLARYKRWRRCQQ 380
Query: 286 CSFYVQRRSGCEHMKCRCGCNFCYECGKDWKHGH 319
C ++ GC HM CRCG FCY CG +++ G
Sbjct: 381 CRIMIELAQGCNHMTCRCGHEFCYSCGAEYREGQ 414
>AT4G19670.1 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C IC + + SEM KC H FCS C+ +V +++ + + + CP C L
Sbjct: 207 CSICCE-DRQSEMMLSLKCTHKFCSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECK 265
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTN------------- 228
LP +E S G K YCP+ NCS L+ D E +++
Sbjct: 266 SFLPVTTFKSFEEANVCSKNNG--KIYCPYPNCSFLL--DPQECLSSGRASSSSSTQSEN 321
Query: 229 ---AECPSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPK 285
ECP C R C C VPWHA M+CEEFQ V W+RC +
Sbjct: 322 SCCVECPVCERFVCVDCGVPWHASMSCEEFQILP-VDERYPDDITLHRLARYKRWRRCQQ 380
Query: 286 CSFYVQRRSGCEHMKCRCGCNFCYECGKDWKHGH 319
C ++ GC HM CRCG FCY CG +++ G
Sbjct: 381 CRIMIELAQGCNHMTCRCGHEFCYSCGAEYREGQ 414
>AT5G37560.1 | Symbols: | RING/U-box superfamily protein |
chr5:14921986-14923790 FORWARD LENGTH=444
Length = 444
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C IC D M KC H C C+ + V +++ + + C C EL E +
Sbjct: 181 CSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLR-SGIVPPCLEDGCKSELTLESCS 239
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE------CPSCH 235
++L +++ W+ E LI +K YCP+++CS+LM E+ AE C C
Sbjct: 240 MVLTPKLIEMWKRKMEEDLIPDAEKIYCPYRSCSMLM--SKTELSREAEQSNVRACIKCS 297
Query: 236 RLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSG 295
LFC C VPWH+ ++C ++++ + D W++C +C ++ G
Sbjct: 298 ELFCIDCKVPWHSDLSCADYKRIHSERLVNDMMLKVLANDQM--WRQCSECKHMIELTEG 355
Query: 296 CEHMKCRCGCNFCYECGKDWKHGH 319
C H+ CRCG FCY CG W H
Sbjct: 356 CNHITCRCGYEFCYRCGHKWTKYH 379
>AT3G45470.1 | Symbols: | IBR domain containing protein |
chr3:16680505-16681261 REVERSE LENGTH=222
Length = 222
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C IC + K MF KC H C C+++ V +++ + C + C ++L E+
Sbjct: 6 CVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVP-TCLDYECKLKLSLENCF 64
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIV-----TNAECPSCHR 236
+L +V+ W+ + E I ++ YCP+ NCS LM EI + C C
Sbjct: 65 KVLKPKVIELWKHMMKEESIPLAKRIYCPYINCSTLM--SKTEISRSNKSNDRACIKCSG 122
Query: 237 LFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGC 296
L C C VPWH+ ++C E++K +D W++C KC ++ GC
Sbjct: 123 LVCIDCKVPWHSDLSCAEYKKLHPDPVLDDLTLKLLANDQK--WRQCVKCRHLIELNQGC 180
Query: 297 EHMKCRCGCNFCYECGKDWKHGHI 320
HM CRCG FCY+CG +WK G +
Sbjct: 181 NHMTCRCGYQFCYKCGVEWKKGQV 204
>AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24252226-24254710 FORWARD
LENGTH=655
Length = 655
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C ICF+ MF KC H FC C+ +HV ++ + + CP+ C EL +
Sbjct: 301 CAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLL-HGMAPKCPHDGCKSELVIDACG 359
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM----VDDGGEIVTNA-------E 230
+L ++ W+ E+ I ++ YCP+ CS LM + + + + +
Sbjct: 360 KLLTPKLSKLWQQRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRR 419
Query: 231 CPSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYV 290
C C LFC C VPWH ++C E++K +D W++C KC +
Sbjct: 420 CVECRGLFCVDCKVPWHGNLSCTEYKKLHPEPPADDVKLKSLANNKM--WRQCGKCQHMI 477
Query: 291 QRRSGCEHMKCRCGCNFCYECGKDW 315
+ GC H+ CRCG FCY CG W
Sbjct: 478 ELSQGCNHITCRCGHEFCYNCGGGW 502
>AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16706312-16707649 REVERSE LENGTH=348
Length = 348
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 122 CGICFDYK-KDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEH- 179
C IC D +++MF KC H FCSDC+ +H+ ++ + ++ + CP+ C L
Sbjct: 100 CKICLDDDINENQMFCVGKCRHRFCSDCMRRHIEVRLLEGSV-MRCPHYRCKTTLKFGGC 158
Query: 180 LNLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE-----CPSC 234
+NL+ PK + W+ E LI + YCP CS LM + I T + C C
Sbjct: 159 INLLTPK-IREMWQQRIKEDLIPVTGRIYCPNSRCSALMSETELSISTKEDEVRRCCFKC 217
Query: 235 HRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRS 294
++FC +C V WH+ ++C +++K E D W++C KC ++
Sbjct: 218 GQIFCIKCKVSWHSNLSCNDYKKLNPYPTENDGKIKALANQKR--WRQCGKCQHMIELSK 275
Query: 295 GCEHMKCRCGCNFCYECGKDW---KHGH 319
GC +KCRCG FCY CG KHGH
Sbjct: 276 GCVQVKCRCGHKFCYRCGVQAGGCKHGH 303
>AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11130119-11131514 FORWARD LENGTH=384
Length = 384
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 9/205 (4%)
Query: 122 CGICFDYKKDSEM-FRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
C ICFD +++M F +C H FCS+C+ +H+ + Q +L + CP+ C +L
Sbjct: 153 CTICFDDDINADMMFYIDQCGHMFCSECVKRHIEVSLLQGSL-ITCPSYRCKSKLTYGSC 211
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE--CPSCHRLF 238
IL +V W E I + YCP CS LM + +T ++ C C F
Sbjct: 212 VNILTPKVKEMWIQRMGEDSIPVTDRVYCPNPTCSALMSVTELDQLTGSKRCCVKCGESF 271
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C +C VPWH ++C+ ++K + D W++C KC ++ GC
Sbjct: 272 CIKCKVPWHDNLSCKRYKKLHSNRTTNDKQLNELANQES--WRQCSKCKHMIELTQGCVR 329
Query: 299 MKCRCGCNFCYECGKDW---KHGHI 320
+ CRCG FCY CG D HGH+
Sbjct: 330 VICRCGHEFCYGCGADAGCCSHGHV 354
>AT2G25370.2 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=546
Length = 546
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
CGI F+ MF KC H C C+ +HV +++ + C C +L E +
Sbjct: 247 CGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGT-EPTCLEYGCKFKLTLERCS 305
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM----VDDGGEIVTNAECPSCHRL 237
+L +++ W+ E I ++ YCP+ NCS+LM + ++ C C L
Sbjct: 306 KVLTLKLIEMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTELSSEADLSNVRTCVKCCGL 365
Query: 238 FCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCE 297
FC C VP H ++ ++++K +D W++C KC ++ GC
Sbjct: 366 FCIDCKVPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDKM--WRQCVKCRHMIELSHGCN 423
Query: 298 HMKCRCGCNFCYECGKDWK 316
HM CRCG FCYECG +W+
Sbjct: 424 HMTCRCGYEFCYECGIEWQ 442
>AT2G25370.1 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=603
Length = 603
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
CGI F+ MF KC H C C+ +HV +++ + C C +L E +
Sbjct: 304 CGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGT-EPTCLEYGCKFKLTLERCS 362
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM----VDDGGEIVTNAECPSCHRL 237
+L +++ W+ E I ++ YCP+ NCS+LM + ++ C C L
Sbjct: 363 KVLTLKLIEMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTELSSEADLSNVRTCVKCCGL 422
Query: 238 FCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCE 297
FC C VP H ++ ++++K +D W++C KC ++ GC
Sbjct: 423 FCIDCKVPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDKM--WRQCVKCRHMIELSHGCN 480
Query: 298 HMKCRCGCNFCYECGKDWK 316
HM CRCG FCYECG +W+
Sbjct: 481 HMTCRCGYEFCYECGIEWQ 499
>AT2G21420.1 | Symbols: | IBR domain containing protein |
chr2:9169713-9171746 FORWARD LENGTH=468
Length = 468
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C IC + MF C H C C+++HV ++ + C + C+ EL E +
Sbjct: 187 CCICRENTDADRMFFTENCFHRQCFSCVNRHVQ-RMLLCGISPTCLHFPCNSELTFESCS 245
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE----CPSCHRL 237
+L ++ W+ E L+ K YCP++ CS+LM T+ C C RL
Sbjct: 246 KVLTPNLIEFWKRKIEEDLVPAADKIYCPYRRCSMLMSKTALSRETDQSNVRACIKCCRL 305
Query: 238 FCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCE 297
FC C VP HAG++C +++K + + W++C +CS V+ GC
Sbjct: 306 FCIDCKVPSHAGLSCVDYKK---LNPDPLYDVKLKSLANKKKWRQCVQCSNLVELFEGCN 362
Query: 298 HMKCRCGCNFCYECGKDWKH 317
H+ CRCG FCY CGK+W
Sbjct: 363 HITCRCGFEFCYVCGKEWNQ 382
>AT2G25360.1 | Symbols: | RING/U-box superfamily protein |
chr2:10804249-10805761 FORWARD LENGTH=373
Length = 373
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 121 LCGICFDYKKDSEMFRGS-KCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEH 179
+C ICF+ + MF + KC H C C+ ++V ++ + C + C +L E
Sbjct: 89 ICSICFEETEGERMFFTTEKCVHRHCFPCVKQYVEVKLLSGTVP-TCLDDGCKFKLTLES 147
Query: 180 LNLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM----VDDGGEIVTNAECPSCH 235
+ +L E++ W+ E I ++ YCP+ NCS+LM + ++ + C C
Sbjct: 148 CSKVLTLELIEMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTELSSESDLSNDRSCVKCC 207
Query: 236 RLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSG 295
LFC C VP H+ ++C E++K ++ W++C C ++
Sbjct: 208 GLFCIDCKVPSHSDLSCAEYKKLHHDPLVDELKLKSLAKDKK--WRQCKMCRHMIELSHA 265
Query: 296 CEHMKCRCGCNFCYECGKDWKH 317
C HM CRCG FCY+C +WK+
Sbjct: 266 CNHMTCRCGYQFCYQCEVEWKN 287
>AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16729989-16731511 REVERSE LENGTH=408
Length = 408
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 122 CGICFDYKKDSE-MFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
C IC D + E MF + C H FC +C+ +H+ ++ + C + C+ +L +
Sbjct: 173 CSICSDDNFEPELMFSVALCGHEFCVECVKRHIEVRLLAGGVP-RCLHYQCESKLTLANC 231
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMV-----DDGGEIVTNAECPSCH 235
+L ++ WE E I ++ YCP CS LM + E VT C C
Sbjct: 232 ANLLTSKLKAMWELRIEEESIPVEERVYCPNPRCSSLMSVTKLSNSTREDVTMRSCVKCG 291
Query: 236 RLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSG 295
FC C +PWH+ ++C +++ G +D W++C C ++ G
Sbjct: 292 EPFCINCKLPWHSNLSCNDYKSLGPNPTADDIKLKALANQKM--WRQCENCKNVIELSEG 349
Query: 296 CEHMKCRCGCNFCYECGKDWKHGHICDKHN 325
C H+ CRCG FCY+CG W G + H+
Sbjct: 350 CMHITCRCGHQFCYKCGAKWITGRVFCTHS 379
>AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11127134-11128476 FORWARD LENGTH=398
Length = 398
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 122 CGICF-DYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
C IC D +MF K H CS+C+ +H+ ++ + +L + CP+ C+ L
Sbjct: 159 CNICLNDDINADQMFSVDKSGHMCCSECVKRHIEVRLLEGSL-ITCPHYRCNSLLTSVRC 217
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVD---DGGEIVTNAECPSCHRL 237
+L ++ WE + LI + + YCP CS LM + G I C C
Sbjct: 218 GNLLTPKLNKMWEQKTKDELIPVMDRVYCPNPRCSTLMSETELSGLNIGVRRCCVKCGEP 277
Query: 238 FCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCE 297
FC +C V WH ++C+E++ E D W++C KC ++ SGC
Sbjct: 278 FCVKCKVSWHNNLSCDEYKTLHPNPTENDGRLRDLANEKS--WRQCSKCKHMIELSSGCI 335
Query: 298 HMKCRCGCNFCYECGKD 314
+ CRCG FCY+CG D
Sbjct: 336 SVVCRCGHTFCYQCGAD 352
>AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16683263-16684592 REVERSE LENGTH=382
Length = 382
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 87/211 (41%), Gaps = 24/211 (11%)
Query: 122 CGICF-DYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
CG CF D K MF C H FC +C+ +H+ + + L CP+ C L
Sbjct: 156 CGNCFNDGIKGENMFSADLCSHYFCVECMKEHIEVSLNEGGLP-RCPHDGCTSNLTLRSC 214
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE-------CPS 233
+ +L + WE E I + +CP C LM E+ + E C
Sbjct: 215 DHLLTPKQREMWEKRIKEESIPVCDRFHCPNPRCWALM--SKTELTESTEEDGVRRCCYK 272
Query: 234 CHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRR 293
C + FC C VPWH+ ++C+E + SGR W++C C ++
Sbjct: 273 CRKHFCINCKVPWHSNLSCKEHKSSGR-------------EPITTVWRQCRSCLHKIKLS 319
Query: 294 SGCEHMKCRCGCNFCYECGKDWKHGHICDKH 324
+ CRCG FCY CG WK G C H
Sbjct: 320 EERMPVTCRCGYKFCYACGAQWKLGGCCSHH 350
>AT2G19610.2 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485863 FORWARD LENGTH=418
Length = 418
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAA-QIQQNNLKVNCPNPNCDVELGPEHL 180
C +C+ Y ++ F C H C C+ K ++ QI + N + CP P+C+ +L PE
Sbjct: 203 CPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRGNTAI-CPYPDCENDLVPEDC 261
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM--VDDGGEIVTNA-------EC 231
+ + + E I + YCP +CS LM +D I N +C
Sbjct: 262 RAFADADAITLMIQRKKEKAIPVKDRVYCPNPSCSFLMSDLDLIRHISKNPRHSEEARKC 321
Query: 232 PSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQ 291
C FC +C VPWH C+EF+KS + W++C +C VQ
Sbjct: 322 MECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSD--AAILESFVKTQGWKKCSQCQSIVQ 379
Query: 292 RRSGCEHMKCR-CGCNFCYECG 312
GC+ M CR C FCY CG
Sbjct: 380 HGGGCQQMTCRHCKHEFCYTCG 401
>AT2G19610.1 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485723 FORWARD LENGTH=397
Length = 397
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 13/191 (6%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAA-QIQQNNLKVNCPNPNCDVELGPEHL 180
C +C+ Y ++ F C H C C+ K ++ QI + N + CP P+C+ +L PE
Sbjct: 203 CPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRGNTAI-CPYPDCENDLVPEDC 261
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM--VDDGGEIVTNA-------EC 231
+ + + E I + YCP +CS LM +D I N +C
Sbjct: 262 RAFADADAITLMIQRKKEKAIPVKDRVYCPNPSCSFLMSDLDLIRHISKNPRHSEEARKC 321
Query: 232 PSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQ 291
C FC +C VPWH C+EF+KS + W++C +C VQ
Sbjct: 322 MECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSD--AAILESFVKTQGWKKCSQCQSIVQ 379
Query: 292 RRSGCEHMKCR 302
GC+ M CR
Sbjct: 380 HGGGCQQMTCR 390
>AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:15646460-15647566 FORWARD
LENGTH=346
Length = 346
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 14/190 (7%)
Query: 122 CGICFDYKKDSE-MFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
C ICF+ ++E MF + C H FC +C+ ++ ++ + + C + C+ +L
Sbjct: 155 CSICFNNVLEAEKMFSVAICGHQFCVECVKHYIEVKLLEGGVP-RCLDYQCESKLTLTSC 213
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE--------CP 232
+L ++ W+ E LI ++ YCP CS LM E+ T+ E C
Sbjct: 214 GNLLTPKLKAIWKQRIEEELILVAERVYCPNPRCSGLM--SKTELSTSTEEDVSTRTCCV 271
Query: 233 SCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQR 292
C FC C VPWH+ ++C+++++ G + D W +C KC + R
Sbjct: 272 KCGEPFCINCKVPWHSNLSCDDYKRLGPNPTKND--IKLKVLANQQKWSQCAKCQHMIAR 329
Query: 293 RSGCEHMKCR 302
GC + CR
Sbjct: 330 IEGCNVIICR 339
>AT3G45460.1 | Symbols: | IBR domain containing protein |
chr3:16678680-16680043 REVERSE LENGTH=389
Length = 389
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 134 MFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLNLILPKEVVFRWE 193
MF + C H F + + +H+ ++ + ++ CP+ C L + + +L ++ WE
Sbjct: 183 MFSVALCRHQFGVEWMKQHIEVRLIEGDVP-RCPHDGCKSILSLKSCSHLLTPKLEEMWE 241
Query: 194 SLRCESLIAGLQKSYCPFKNCSVLMVDDGGEIVTNAE------CPSCHRLFCAQCMVPWH 247
E I + +CP C LM E+V + E C C + FC C V WH
Sbjct: 242 HRIKEEFIPVCDRFHCPNPRCWALM--SKTELVESTEDGVRRCCFKCRKAFCINCKVLWH 299
Query: 248 AGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEHMKCRCGCNF 307
+ ++C+E++ GR ++C KC ++ ++ CRCG +F
Sbjct: 300 SDLSCKEYKTLGR--------------NPKTISRQCKKCQHMIKLSHKTINVYCRCGYSF 345
Query: 308 CYECGKDWKHGHICDKHN 325
CY CG WK G C HN
Sbjct: 346 CYTCGAQWKLGG-CRHHN 362
>AT3G45555.1 | Symbols: | RING/U-box protein |
chr3:16712368-16713009 REVERSE LENGTH=213
Length = 213
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 122 CGICF-DYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
C ICF D K +M+ + C H FC +C+ +++ ++ + + + CP C+ +L +
Sbjct: 17 CSICFNDDFKSEQMYYVALCNHKFCLECMKRYIEVRLLEGTVLI-CPYYQCESKLTLKSC 75
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM---------VDDGGEIVTNAEC 231
IL ++ WE E I ++ YCP CS LM ++DG C
Sbjct: 76 FHILTSKLKAMWEQKIEEESIPVTERFYCPNPRCSALMSKIELSKSTLEDGF-----VRC 130
Query: 232 PSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQ 291
C FC C V W + ++C+ +K G +D W++C KC ++
Sbjct: 131 FQCGERFCINCKVSWQSNLSCDNCKKLGNNPTSDD--KMLKVLANEKKWRQCEKCQHMIK 188
Query: 292 RRSGCEHMKC 301
GC H+ C
Sbjct: 189 LSEGCIHVTC 198
>AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily
protein | chr2:13508493-13510390 FORWARD LENGTH=514
Length = 514
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICF+ E+ S C HP+C C + ++ +I+ L+V CP P+C +G +
Sbjct: 121 CGICFESYTRKEIASVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 179
Query: 180 LNLILPKEVVFRWESLRCESLIA-GLQKSYCPFKNCSVLMVDDGGEIVTNAECPSCHRLF 238
++ + K+ ++ S + G + +CP C V+ G + C +R F
Sbjct: 180 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEC-AVEFGESSGYDVACLCSYR-F 237
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C C H+ ++CE K +E + CPKC +++ GC H
Sbjct: 238 CWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANS----KPCPKCKRPIEKSHGCNH 293
Query: 299 MKC--RCGCNFCYECGKDWKHGHICDKH 324
M C CG FC+ CGK + + C+ +
Sbjct: 294 MTCSASCGHRFCWICGKSYSDHYACNNY 321
>AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing protein
| chr1:24301165-24306159 REVERSE LENGTH=567
Length = 567
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 12/203 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICF+ S+ + C HPFC C ++ I L + CP+P+C +G +
Sbjct: 128 CGICFE-TFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVGQDM 186
Query: 180 LNLILPKEVVFRWESLRCESLIAGLQKS-YCPFKNCSVLMVDDGGEIVTNAECPSCHRLF 238
+NL+ P + ++ S S + +K+ +CP C + G + C C+ F
Sbjct: 187 INLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGCDYAVNFVVGSGNYDVNCRCCYS-F 245
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C C H ++C+ K E + CPKC +++ GC H
Sbjct: 246 CWNCAEEAHRPVDCDTVSKWVLKNSAESENMNWILANS----KPCPKCKRPIEKNQGCMH 301
Query: 299 MKCR--CGCNFCYECGKDW-KHG 318
+ C C FC+ C W +HG
Sbjct: 302 ITCTPPCKFEFCWLCLGAWTEHG 324
>AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily
protein | chr2:13511579-13513550 FORWARD LENGTH=543
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICF+ E+ R S C HP+C C + ++ +I+ L+V CP P+C +G +
Sbjct: 128 CGICFESYTREEIARVS-CGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 186
Query: 180 LNLILPKEVVFRWESLRCESLIA-GLQKSYCPFKNCSVLMVDDGGEIVTNAECPSCHRLF 238
+ + +V ++ S + G + +CP C + G E + C F
Sbjct: 187 IEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRF 246
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C C H+ ++C+ K +E + CP+C +++ GC H
Sbjct: 247 CWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANS----KPCPECKRPIEKNDGCNH 302
Query: 299 MKCR--CGCNFCYECGKDW-KHGHICDK 323
M C CG FC+ C K + +H C++
Sbjct: 303 MTCSAPCGHEFCWICLKAYRRHSGACNR 330
>AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily
protein | chr1:1779631-1784166 FORWARD LENGTH=552
Length = 552
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICFD E+ S C HPFC+ C + +++ I L + CP+P+C +G +
Sbjct: 132 CGICFDSYTLEEIVSVS-CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDM 190
Query: 180 LNLILPKEVVFRWESLRCESLI-AGLQKSYCPFKNCSVLMVDDGGEIVTNAECPSCHRLF 238
++ + KE ++ S + + +CP C + GG + C C F
Sbjct: 191 IDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSC-LCSHSF 249
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C C H ++C+ K E + CPKC +++ GC H
Sbjct: 250 CWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS----KPCPKCKRPIEKNHGCMH 305
Query: 299 MKCR--CGCNFCYECGKDW-KHG 318
M C C FC+ C W +HG
Sbjct: 306 MTCTPPCKFEFCWLCLNAWTEHG 328
>AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein |
chr1:1779631-1784166 FORWARD LENGTH=594
Length = 594
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 12/203 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICFD E+ S C HPFC+ C + +++ I L + CP+P+C +G +
Sbjct: 174 CGICFDSYTLEEIVSVS-CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDM 232
Query: 180 LNLILPKEVVFRWESLRCESLI-AGLQKSYCPFKNCSVLMVDDGGEIVTNAECPSCHRLF 238
++ + KE ++ S + + +CP C + GG + C C F
Sbjct: 233 IDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCL-CSHSF 291
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C C H ++C+ K E + CPKC +++ GC H
Sbjct: 292 CWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS----KPCPKCKRPIEKNHGCMH 347
Query: 299 MKCR--CGCNFCYECGKDW-KHG 318
M C C FC+ C W +HG
Sbjct: 348 MTCTPPCKFEFCWLCLNAWTEHG 370
>AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 |
chr1:11663462-11666037 REVERSE LENGTH=688
Length = 688
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNL-KVNCPNPNCDVELGPEHL 180
C ICF + F C+H FC C+ + + + + K+ CP+ C + P L
Sbjct: 378 CCICFSESAGID-FVKLPCQHFFCLKCMKTYTDIHVTEGTVNKLKCPDSKCGETVPPGIL 436
Query: 181 NLILPKEVVFRWESLRCESLIAGLQK-SYCPFKNCSVLMVDDGGEIVTNAECPSCHRLFC 239
+L E RWE+L + + + +YCP C ++D ++ A C C+ FC
Sbjct: 437 KRLLGDEAYERWETLMLQKTLESMTDVAYCP--RCETPCIEDEEQL---ALCFKCYFSFC 491
Query: 240 AQCMVPWHAGMNC----------EEFQKSGRV------KGEEDXXXXXXXXXXXXXWQRC 283
C H G+ C +E Q S R+ K +E ++C
Sbjct: 492 TLCKEKRHVGVACMSPELRLQILQERQDSSRLGEEQRRKEKEMINEIMSVKVIMKSAKQC 551
Query: 284 PKCSFYVQRRSGCEHMKC-RCGCNFCYECGK 313
P C + R GC M C CG FCY C +
Sbjct: 552 PSCKIAISRTGGCNKMVCNNCGQYFCYRCNE 582
>AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily
protein | chr2:13515199-13517142 FORWARD LENGTH=443
Length = 443
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICF+ E+ R S C HP+C C + ++ +I+ L+V CP P+C +G +
Sbjct: 139 CGICFESYTRKEIARVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 197
Query: 180 LNLILPKEVVFRWESLRCESLIA-GLQKSYCPFKNCSVLMVDDG--GEIVTNAECPSCHR 236
++ + K+ ++ S + G + +CP C V+ G G + C C
Sbjct: 198 IDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCE-YAVEFGVNGSSSYDVSCL-CSY 255
Query: 237 LFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGC 296
FC C H+ ++CE K +E + CPKC +++ +GC
Sbjct: 256 KFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKT----KPCPKCKRPIEKNTGC 311
Query: 297 EHMKCRCGCN--FCYEC 311
HM C C FC+ C
Sbjct: 312 NHMSCSAPCRHYFCWAC 328
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 17/213 (7%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQ-NNLKVNCPNPNCDVELGPEHL 180
C IC D G C H FC C+ + A ++ + + C + +C + +
Sbjct: 1564 CPICLSEVDDGYSLEG--CSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADM 1621
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCS------VLMVDDGGEIVTNAECPSC 234
+L +E + + L SL + + S F+ CS V V E C +C
Sbjct: 1622 RALLSQE---KLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGAC 1678
Query: 235 HRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRS 294
H C +C + +H + CE ++K +E+ + CP C +++
Sbjct: 1679 HSEICTRCHLEYHPLITCERYKKF-----KENPDLSLKDWAKGKNVKECPICKSTIEKTD 1733
Query: 295 GCEHMKCRCGCNFCYECGKDWKHGHICDKHNST 327
GC HMKCRCG + C+ C + C H T
Sbjct: 1734 GCNHMKCRCGKHICWTCLDVFTQEEPCYAHLRT 1766
>AT5G07640.1 | Symbols: | RING/U-box superfamily protein |
chr5:2414847-2415876 FORWARD LENGTH=316
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 11/147 (7%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHLN 181
C +C+++ E F C H FC DCI K ++ VNCP+ C+ EL E
Sbjct: 157 CPVCYEHVTSDEKFEVPGCFHRFCFDCIKKQADVALEFAKPVVNCPSFGCNSELQREDCE 216
Query: 182 LILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM-----VDDGGEIVTNAE------ 230
+L + + R + S+I + C +M ++ +AE
Sbjct: 217 GVLKPKQLDRMTMYKKASMIKAKVLDFVCCTTCDNVMAKPDLIEYTKTFFVDAELSGVRK 276
Query: 231 CPSCHRLFCAQCMVPWHAGMNCEEFQK 257
C C FC +C WH+GM CEE+ K
Sbjct: 277 CTECGYCFCGECRAGWHSGMTCEEYFK 303
>AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily
protein | chr3:10269304-10270917 FORWARD LENGTH=537
Length = 537
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLK-VNCPNPNCDVELGPEHL 180
C +C + S + +C H FC+DC H +I + K + C C + +
Sbjct: 121 CDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAICDEDVV 180
Query: 181 NLILPKEVVFRWESLRCESLIAGLQK-SYCPFK---NCSVLMVDDGGEIVTNAECPSCHR 236
++ E+ R++ ES + +CP K ++ ++DG ++V C SC
Sbjct: 181 RKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVV-EVGC-SCGL 238
Query: 237 LFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGC 296
FC C+ H+ +C + K + K E++ + CPKCS +Q+R GC
Sbjct: 239 QFCFSCLSESHSPCSCLMW-KLWKKKCEDESETVNWITVNT---KLCPKCSKPIQKRDGC 294
Query: 297 EHMKCRCGCNFCYECGK 313
M C+CG +FC+ CG+
Sbjct: 295 NLMTCKCGQHFCWLCGQ 311
>AT3G45510.1 | Symbols: | RING/U-box protein |
chr3:16690790-16691728 REVERSE LENGTH=257
Length = 257
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 122 CGICF-DYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
CGICF D + EMF + C H FC +C+ + + + + + CP C L
Sbjct: 66 CGICFVDDIEGQEMFSAALCSHYFCVECMKQRIEVSLNEGGVP-RCPRHGCKSALTLRSC 124
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLM--------VDDGGEIVTNAECP 232
+ +L + WE E I + +CP C LM DDG C
Sbjct: 125 DHLLTPKQREMWEQRIKEESIPVCNRFHCPNPKCWALMSKTELTESTDDG----VRRCCS 180
Query: 233 SCHRLFCAQCMVPWHAGMNCEEFQKSG 259
C + FC C V WH+ ++C+E++ G
Sbjct: 181 KCRKPFCIDCNVSWHSNLSCKEYKMKG 207
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 17/213 (7%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQ-NNLKVNCPNPNCDVELGPEHL 180
C IC D G C H FC C+ + A ++ + + C + +C + +
Sbjct: 1561 CPICLSEVDDGYSLEG--CSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADM 1618
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKS-----YCPFKNC-SVLMVDDGGEIVTNAECPSC 234
+L +E + + L SL A + S +C +C S+ V E C +C
Sbjct: 1619 RALLSQE---KLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGAC 1675
Query: 235 HRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRS 294
H C +C + +H + CE ++K +E+ + CP C +++
Sbjct: 1676 HSETCTRCHLEYHPLITCERYKKF-----KENPDLSLKDWAKGKDVKECPICKSTIEKTD 1730
Query: 295 GCEHMKCRCGCNFCYECGKDWKHGHICDKHNST 327
GC H++CRCG + C+ C + C H T
Sbjct: 1731 GCNHLQCRCGKHICWTCLDVFTQAEPCYAHLRT 1763
>AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing protein
| chr2:13416991-13421170 REVERSE LENGTH=562
Length = 562
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 12/203 (5%)
Query: 122 CGICFDYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNN--LKVNCPNPNCDVELGPEH 179
CGICFD E C HPFC+ C + +++ I L + CP+P+C +G +
Sbjct: 137 CGICFD-SYPPEKIASVSCGHPFCTTCWTGYISTTINDGPGCLMLRCPDPSCLAAVGHDM 195
Query: 180 LNLILPKEVVFRWESLRCESLIAGLQK-SYCPFKNCSVLMVDDGGEIVTNAECPSCHRLF 238
++ + ++ ++ S I +K +CP C + G + C C F
Sbjct: 196 VDKLASEDEKEKYNRYFLRSYIEDNRKMKWCPAPGCDFAIDFVAGSGNYDVSCL-CSFSF 254
Query: 239 CAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXXWQRCPKCSFYVQRRSGCEH 298
C C H ++C K E + CP+C +++ GC H
Sbjct: 255 CWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANS----KPCPRCKRPIEKNQGCMH 310
Query: 299 MKCR--CGCNFCYECGKDW-KHG 318
M C C FC+ C W HG
Sbjct: 311 MTCTPPCKYEFCWLCLGAWMDHG 333
>AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:16725094-16726116 REVERSE
LENGTH=312
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 122 CGICF-DYKKDSEMFRGSKCEHPFCSDCISKHVAAQIQQNNLKVNCPNPNCDVELGPEHL 180
C IC D + ++F + C H FC +C+ +H+ ++ + C + C+ L
Sbjct: 163 CSICSGDNIEPEQIFSVALCGHEFCMECVKQHIEVKLLSGGVP-RCLHYQCESNLTLGSC 221
Query: 181 NLILPKEVVFRWESLRCESLIAGLQKSYCPFKNCSVLMV-----DDGGEIVTNAECPSCH 235
IL ++ WE E I ++ YCP CS LM + E VT C C
Sbjct: 222 GNILTSKLKAMWELRIEEESIPVAERVYCPNPLCSSLMSVTKLSNSTREDVTMRTCVKCG 281
Query: 236 RLFCAQCMVPWHAGMNCEEFQKSG 259
FC C +PWH+ ++C +++ G
Sbjct: 282 EPFCINCKLPWHSNLSCNDYKSLG 305
>AT5G63760.2 | Symbols: | RING/U-box superfamily protein |
chr5:25516255-25517718 REVERSE LENGTH=452
Length = 452
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 26/220 (11%)
Query: 119 RCLCGICF-----DYKKDSEMFRGSK-----CEHPFCSDCISKHV---AAQIQQNNLKVN 165
R CGIC DY D+ + G C H FC C SK++ +++N+ ++
Sbjct: 23 RVYCGICSNIGDDDYDGDAVVVDGDLISTPFCSHKFCKACWSKYLKKNFFSVEKNHTAIS 82
Query: 166 CPNPNCDVELGPEHLN-LILPKEVVFRWESLRC-ESLIAGLQKSYCPFKNCSVL----MV 219
CP+ +C +GPE + L + + ++ L+ G + CP + C+ + +
Sbjct: 83 CPDRDCRAAVGPETVEKLTVRDQAMYELYILKSYREKYLGWKLKLCPARGCNYVIEFHLA 142
Query: 220 DDGGEIVTNAECPSCHRLFCAQCMVPWHAGMNC---EEFQKSGRVKGEEDXXXXXXXXXX 276
+ E N C C +FC +CM+ H + C ++ K E+
Sbjct: 143 SEDEEHSLNIVC-LCGHIFCWRCMLESHRPVTCNNASDWLSRDLEKLIEEVDKPSTVSWI 201
Query: 277 XXXWQRCPKCSFYVQ---RRSGCEHMKCRCGCNFCYECGK 313
+ CP C V+ R + + C C FC++C +
Sbjct: 202 DANTKPCPHCFIPVEIDGERPWAQFLTCVCSGRFCWKCFR 241
>AT5G63760.1 | Symbols: ARI15, ATARI15 | RING/U-box superfamily
protein | chr5:25516255-25517718 REVERSE LENGTH=452
Length = 452
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 26/220 (11%)
Query: 119 RCLCGICF-----DYKKDSEMFRGSK-----CEHPFCSDCISKHV---AAQIQQNNLKVN 165
R CGIC DY D+ + G C H FC C SK++ +++N+ ++
Sbjct: 23 RVYCGICSNIGDDDYDGDAVVVDGDLISTPFCSHKFCKACWSKYLKKNFFSVEKNHTAIS 82
Query: 166 CPNPNCDVELGPEHLN-LILPKEVVFRWESLRC-ESLIAGLQKSYCPFKNCSVL----MV 219
CP+ +C +GPE + L + + ++ L+ G + CP + C+ + +
Sbjct: 83 CPDRDCRAAVGPETVEKLTVRDQAMYELYILKSYREKYLGWKLKLCPARGCNYVIEFHLA 142
Query: 220 DDGGEIVTNAECPSCHRLFCAQCMVPWHAGMNC---EEFQKSGRVKGEEDXXXXXXXXXX 276
+ E N C C +FC +CM+ H + C ++ K E+
Sbjct: 143 SEDEEHSLNIVC-LCGHIFCWRCMLESHRPVTCNNASDWLSRDLEKLIEEVDKPSTVSWI 201
Query: 277 XXXWQRCPKCSFYVQ---RRSGCEHMKCRCGCNFCYECGK 313
+ CP C V+ R + + C C FC++C +
Sbjct: 202 DANTKPCPHCFIPVEIDGERPWAQFLTCVCSGRFCWKCFR 241
>AT3G27720.1 | Symbols: ARI4, ATARI4 | IBR domain containing protein
| chr3:10271876-10273621 FORWARD LENGTH=493
Length = 493
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 220 DDGGEIVTNAECPSCHRLFCAQCMVPWHAGMNCEEFQKSGRVKGEEDXXXXXXXXXXXXX 279
DDG V EC SC FC C+ H+ +C + K + K E++
Sbjct: 185 DDGD--VDEVEC-SCGLQFCFSCLSESHSPCSCLMW-KLWKKKCEDESETVNWMTVNT-- 238
Query: 280 WQRCPKCSFYVQRRSGCEHMKCRCGCNFCYECGK 313
+ CPKCS +Q+R GC HM C+CG +FC+ CG+
Sbjct: 239 -KLCPKCSKPIQKRDGCNHMTCKCGQHFCWLCGQ 271