Miyakogusa Predicted Gene

Lj0g3v0107279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0107279.1 Non Chatacterized Hit- tr|I3T2Z2|I3T2Z2_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,76.79,7e-19,
,13169_g.1
         (56 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ...    72   1e-13

>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
           ATFIT1 | FER-like regulator of iron uptake |
           chr2:12004713-12005908 FORWARD LENGTH=318
          Length = 318

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 48/57 (84%), Gaps = 1/57 (1%)

Query: 1   MFQVEERGYYVKIVCNKGAGVAVSLYRAIESLAGFNVRNTNLATVC-DSFVLTFTMN 56
           + QVEE+G+YV++VCNKG GVA SLY+++ESL  F V+N+NL++   D+++LT+T++
Sbjct: 229 VIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLD 285