Miyakogusa Predicted Gene

Lj0g3v0106859.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106859.1 Non Chatacterized Hit- tr|I1N0I4|I1N0I4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.68,2e-18,VACUOLAR
ATP SYNTHASE SUBUNIT H,ATPase, V0 complex, subunit E;
ATP_synt_H,ATPase, V0 complex, subuni,CUFF.6100.1
         (70 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55290.2 | Symbols:  | ATPase, V0 complex, subunit E | chr5:2...   125   6e-30
AT5G55290.1 | Symbols:  | ATPase, V0 complex, subunit E | chr5:2...   125   6e-30
AT4G26710.2 | Symbols:  | ATPase, V0 complex, subunit E | chr4:1...   120   3e-28
AT4G26710.1 | Symbols:  | ATPase, V0 complex, subunit E | chr4:1...   120   3e-28

>AT5G55290.2 | Symbols:  | ATPase, V0 complex, subunit E |
          chr5:22423037-22424086 REVERSE LENGTH=70
          Length = 70

 Score =  125 bits (314), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 64/70 (91%)

Query: 1  MGFLVTTLIFAVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKP 60
          MGFL+TTLIF V+GIIA LC RICCNRGPSTNL HLTLVITAT+CCWMMWAIVY+AQM P
Sbjct: 1  MGFLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 61 LIVPILSEGE 70
          LIVPILSE E
Sbjct: 61 LIVPILSETE 70


>AT5G55290.1 | Symbols:  | ATPase, V0 complex, subunit E |
          chr5:22423037-22424086 REVERSE LENGTH=70
          Length = 70

 Score =  125 bits (314), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 64/70 (91%)

Query: 1  MGFLVTTLIFAVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKP 60
          MGFL+TTLIF V+GIIA LC RICCNRGPSTNL HLTLVITAT+CCWMMWAIVY+AQM P
Sbjct: 1  MGFLITTLIFVVVGIIASLCVRICCNRGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 61 LIVPILSEGE 70
          LIVPILSE E
Sbjct: 61 LIVPILSETE 70


>AT4G26710.2 | Symbols:  | ATPase, V0 complex, subunit E |
          chr4:13468705-13469668 FORWARD LENGTH=70
          Length = 70

 Score =  120 bits (300), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 64/70 (91%)

Query: 1  MGFLVTTLIFAVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKP 60
          M F+VT+LIFAV+GIIA +CTRIC N+GPSTNL HLTLVITAT+CCWMMWAIVY+AQM P
Sbjct: 1  MAFVVTSLIFAVVGIIASICTRICFNKGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 61 LIVPILSEGE 70
          LIVPILSE E
Sbjct: 61 LIVPILSEVE 70


>AT4G26710.1 | Symbols:  | ATPase, V0 complex, subunit E |
          chr4:13468705-13469668 FORWARD LENGTH=70
          Length = 70

 Score =  120 bits (300), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 64/70 (91%)

Query: 1  MGFLVTTLIFAVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKP 60
          M F+VT+LIFAV+GIIA +CTRIC N+GPSTNL HLTLVITAT+CCWMMWAIVY+AQM P
Sbjct: 1  MAFVVTSLIFAVVGIIASICTRICFNKGPSTNLLHLTLVITATVCCWMMWAIVYIAQMNP 60

Query: 61 LIVPILSEGE 70
          LIVPILSE E
Sbjct: 61 LIVPILSEVE 70