Miyakogusa Predicted Gene

Lj0g3v0106609.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106609.1 tr|F2EJT9|F2EJT9_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,41.67,0.000000000000001,Thioredoxin-like,Thioredoxin-like fold;
seg,NULL; no description,Thioredoxin-like fold; SUBFAMILY
NO,CUFF.6074.1
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06730.1 | Symbols: TRX P, TRX z | Thioredoxin z | chr3:21242...   100   4e-22

>AT3G06730.1 | Symbols: TRX P, TRX z | Thioredoxin z |
           chr3:2124276-2125845 FORWARD LENGTH=183
          Length = 183

 Score = 99.8 bits (247), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 50/52 (96%)

Query: 68  CKPPQGKFVRQDYLVEKLSAKEVQDLVKGERDVPLIIDFYATWCGPCILMAQ 119
           C PP+GKFVR+DYLV+KLSA+E+Q+LVKG+R VPLI+DFYATWCGPCILMAQ
Sbjct: 63  CPPPRGKFVREDYLVKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQ 114