Miyakogusa Predicted Gene

Lj0g3v0106549.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106549.2 Non Chatacterized Hit- tr|H9MA57|H9MA57_PINRA
Uncharacterized protein (Fragment) OS=Pinus radiata
GN,61.25,3e-18,seg,NULL,CUFF.6079.2
         (353 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23520.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...   282   2e-76
AT4G37100.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...   264   9e-71
AT5G66950.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...   199   2e-51

>AT2G23520.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr2:10014256-10016943 REVERSE LENGTH=895
          Length = 895

 Score =  282 bits (722), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 183/358 (51%), Positives = 224/358 (62%), Gaps = 62/358 (17%)

Query: 1   MDHDCSERDGTS-TIFEETESVSVGEVIRSPVFSEDESSDNSFWIDLGQSPLGSDSVGQS 59
           ++ + S+RDGTS TIFEE ESVSVGE+++SP FSEDESSDNSFWIDLGQSPLGSDS G  
Sbjct: 464 LEDNASDRDGTSSTIFEENESVSVGELMKSPAFSEDESSDNSFWIDLGQSPLGSDSAGHL 523

Query: 60  SKHKIASPLPPFWFNGRKNQKQQSPKLTSKMYGSPMYDDREVSLGIGTHDEHRVLSFDAA 119
           + HKIASPLPPFWF      K+QSPK  +K Y SPMYD ++            VLSFDAA
Sbjct: 524 NHHKIASPLPPFWF----TSKRQSPKPVAKSYSSPMYDGKD------------VLSFDAA 567

Query: 120 VL-MSQELDRVKEVPEEEHVDDYSRNGNGSDHLHANEIVEEAEASEAFHNGSVAHEGSWL 178
           V+ ++QE++              SRN   S++L   EI EE       + G++ +     
Sbjct: 568 VMSVTQEINSTP-----------SRNLRNSNNLQIQEIQEE-------NCGNIVYR---- 605

Query: 179 NNSTSLARHQGLENGSTSEICPDVKDSAIRRETEGEFRLLGRREGNRYCGGRLLGSEENE 238
                 A      NGS+S+I  D+KD+AIRRETEGEFRLLGRR      GGRLLG E+ E
Sbjct: 606 ------AGSGFGSNGSSSKISSDMKDNAIRRETEGEFRLLGRRG----TGGRLLGLED-E 654

Query: 239 LGSRGRRVSFSMEDNRKEFVSHTLETGDVSATSLDDEEVTSDGEYGDGEDWGRREPEILC 298
             SRG RVSF+M+      VSH+L+ G+ S  S+ DE   SDGE  + +DW RREPEI+C
Sbjct: 655 QPSRGTRVSFNMDR-----VSHSLDQGEASLASVYDE---SDGENPNEDDWDRREPEIVC 706

Query: 299 QHIDHINMLGLIKTTLRLRYLVNWXXXXXXXXXXXX--HDGDEK-ANLVHIYGPKIKY 353
            HIDH+NMLGL KTT RLR+L+NW               DG  +  NLV IYGPKIKY
Sbjct: 707 SHIDHVNMLGLNKTTSRLRFLINWLVISLLQLKVPEPGSDGSSRYMNLVQIYGPKIKY 764


>AT4G37100.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr4:17479173-17481863 REVERSE LENGTH=896
          Length = 896

 Score =  264 bits (674), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 180/365 (49%), Positives = 214/365 (58%), Gaps = 73/365 (20%)

Query: 2   DHDCSERDGTS--TIFEETESVSVGEVIRSPVFSEDESSDNSFWIDLGQSPLGSDSVGQS 59
           D+  S+RDGT+  TIFEETESVSVGE+++SPVFSEDESSDNSFWIDLGQSPLGSD     
Sbjct: 464 DNISSDRDGTTSTTIFEETESVSVGELMKSPVFSEDESSDNSFWIDLGQSPLGSD----- 518

Query: 60  SKHKIASPLPPFWFNGRKNQKQ-QSPKLTSKMYGSPMYDDREVSLGIGTHDEHRVLSFDA 118
             +KIASPLPP W   ++ QKQ QSPK   K Y SP+YD  +            VLSFDA
Sbjct: 519 QHNKIASPLPPIWLTNKRKQKQRQSPKPIPKSYSSPLYDGND------------VLSFDA 566

Query: 119 AVLMSQELDRVKEVPEEEHVDDYSRN-GNGSDHLHANEIVEEAEASEAFHNGSVAHEGSW 177
           AV+          V E       SRN  + S+HLH  EI EE     +F NG        
Sbjct: 567 AVM---------SVTEHGTNSTPSRNRRSSSNHLHVQEIQEE-NCGHSFANGL------- 609

Query: 178 LNNSTSLARHQGLENGSTSEICPDVKDSAIRRETEGEFRLLGRREGNRYCGGRLLGSEEN 237
                            +S I  ++K+SAIRRETEGEFRLLG R+G R    RLLG E+ 
Sbjct: 610 ----------------KSSNISSEIKESAIRRETEGEFRLLGGRDGGR---SRLLGVED- 649

Query: 238 ELGSRGRRVSFSMEDNRKEFVSHTL-ETGDVSATSLDDEEV--TSDGEYGDGE----DWG 290
           E  S+GRRVSF+ME      VSH++ E G+ S  S+ DE+   TSD E GD E    +W 
Sbjct: 650 EHPSKGRRVSFNMER-----VSHSIVEPGEASLASVYDEDYINTSDVENGDDEGADDEWD 704

Query: 291 RR--EPEILCQHIDHINMLGLIKTTLRLRYLVNWXXXXXXXXXXXXHDGDEKANLVHIYG 348
           RR  E EI+C+HIDH+NMLGL KTT RLR+L+NW              G    NLV IYG
Sbjct: 705 RRDTETEIVCRHIDHVNMLGLNKTTTRLRFLINW-LVISLLQLQVPESGGRHMNLVQIYG 763

Query: 349 PKIKY 353
           PKIKY
Sbjct: 764 PKIKY 768


>AT5G66950.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr5:26733333-26735945 FORWARD LENGTH=870
          Length = 870

 Score =  199 bits (507), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/356 (44%), Positives = 194/356 (54%), Gaps = 62/356 (17%)

Query: 1   MDHDC-SERDGTSTIFEETESVSVGEVIRSPVFSEDESSDNSFWIDLGQSPLGSDSVGQS 59
           MDH+  S+RD TS +FEE ES+SVGE+I+SPVFSEDESSD+S WIDLGQSP  SD+ G  
Sbjct: 455 MDHEIGSDRDNTSAVFEEAESISVGELIKSPVFSEDESSDSSLWIDLGQSPADSDNAGHL 514

Query: 60  SKHKIASPLPPFWFNGRKNQKQQ-SPKLTSKMYGSPMYDDREVSLGIGTHDEHRVLSFDA 118
           +K K  SPL       RKN K++ SPK  SK                G++    VLSFDA
Sbjct: 515 NKQK--SPLLV-----RKNHKRRSSPKPASKANN-------------GSNGGRHVLSFDA 554

Query: 119 AVLMSQELDRVKEVPEEEHVDDYSRNGNGSDHLHANEIVEEAEASEAFHNGSVAHEGSWL 178
           AVL          V  E   +      +  + +  +  +   E  E    G         
Sbjct: 555 AVL---------SVSHEVGEEVIEEENSEMNQIDTSRRLRVTEIEEEEEEG--------- 596

Query: 179 NNSTSLARHQGLENGSTSEICPDVKDSAIRRETEGEFRLLGRREGNRYCGGRLLGSEENE 238
             S+ L  H    NGS+S I    KDSAIRRETEGEFRLLGRRE ++Y GGRLL +E+  
Sbjct: 597 -GSSKLTAHA---NGSSSGI----KDSAIRRETEGEFRLLGRREKSQYNGGRLLVNEDEH 648

Query: 239 LGSRGRRVSFSMEDNRKEFVSHTLETGDVSATSLDDEEVTSDGEYGDGEDWGRREPEILC 298
                RRVSF            +++ G+ S  SL DE+   DG  G   D  +REPEI+C
Sbjct: 649 --PSKRRVSF-----------RSVDHGEASVISLGDEDEEEDGSNGVEWDDDQREPEIVC 695

Query: 299 QHIDHINMLGLIKTTLRLRYLVNWXXXXXXXXXXXXHDGD-EKANLVHIYGPKIKY 353
           +HIDH+NMLGL KTT RLRYL+NW             D D E  NLV IYGPKIKY
Sbjct: 696 RHIDHVNMLGLNKTTSRLRYLINWLVTSLLQLRLPRSDSDGEHKNLVQIYGPKIKY 751