Miyakogusa Predicted Gene

Lj0g3v0106169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106169.1 tr|Q58ZF0|Q58ZF0_LOTCO Phenylalanine
ammonia-lyase (Fragment) OS=Lotus corniculatus PE=2
SV=1,94.12,7e-29,Lyase_aromatic,Aromatic amino acid lyase; no
description,NULL; L-aspartase-like,L-Aspartase-like;
SU,NODE_39058_length_229_cov_712.165955.path2.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G53260.1 | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lyas...   125   8e-30
AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2...   124   9e-30
AT5G04230.1 | Symbols: PAL3, ATPAL3 | phenyl alanine ammonia-lya...   124   1e-29
AT5G04230.2 | Symbols: PAL3 | phenyl alanine ammonia-lyase 3 | c...   124   1e-29
AT3G10340.1 | Symbols: PAL4 | phenylalanine ammonia-lyase 4 | ch...   124   1e-29

>AT3G53260.1 | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lyase 2
           | chr3:19744256-19746619 REVERSE LENGTH=717
          Length = 717

 Score =  125 bits (313), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 62/67 (92%)

Query: 2   IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAHFTELVTV 61
           IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFA F+ELV  
Sbjct: 375 IEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVND 434

Query: 62  FSNNVLP 68
           F NN LP
Sbjct: 435 FYNNGLP 441


>AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 |
           chr2:15557602-15560237 REVERSE LENGTH=725
          Length = 725

 Score =  124 bits (312), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 62/67 (92%)

Query: 2   IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAHFTELVTV 61
           IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFA F+ELV  
Sbjct: 383 IEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVND 442

Query: 62  FSNNVLP 68
           F NN LP
Sbjct: 443 FYNNGLP 449


>AT5G04230.1 | Symbols: PAL3, ATPAL3 | phenyl alanine ammonia-lyase
           3 | chr5:1160831-1163707 FORWARD LENGTH=694
          Length = 694

 Score =  124 bits (312), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 63/68 (92%)

Query: 1   MIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAHFTELVT 60
           MIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGV+MDNTRLA+A+IGKLMFA FTELV 
Sbjct: 361 MIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVN 420

Query: 61  VFSNNVLP 68
            F NN LP
Sbjct: 421 DFYNNGLP 428


>AT5G04230.2 | Symbols: PAL3 | phenyl alanine ammonia-lyase 3 |
           chr5:1160831-1163707 FORWARD LENGTH=698
          Length = 698

 Score =  124 bits (312), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 63/68 (92%)

Query: 1   MIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAHFTELVT 60
           MIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGV+MDNTRLA+A+IGKLMFA FTELV 
Sbjct: 365 MIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVN 424

Query: 61  VFSNNVLP 68
            F NN LP
Sbjct: 425 DFYNNGLP 432


>AT3G10340.1 | Symbols: PAL4 | phenylalanine ammonia-lyase 4 |
           chr3:3204260-3207809 FORWARD LENGTH=707
          Length = 707

 Score =  124 bits (311), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 63/68 (92%)

Query: 1   MIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAHFTELVT 60
           MIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLAIA+IGKLMFA F+ELV 
Sbjct: 364 MIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELVN 423

Query: 61  VFSNNVLP 68
            F NN LP
Sbjct: 424 DFYNNGLP 431