Miyakogusa Predicted Gene

Lj0g3v0105939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105939.1 tr|Q8GX43|Q8GX43_ARATH At1g78050 OS=Arabidopsis
thaliana GN=At1g78050/F28K19_30 PE=2 SV=1,78.85,2e-17,Phosphoglycerate
mutase family,Histidine phosphatase superfamily, clade-1; no
description,NULL; His_,CUFF.6046.1
         (215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G78050.1 | Symbols: PGM | phosphoglycerate/bisphosphoglycerat...   214   3e-56
AT1G22170.1 | Symbols:  | Phosphoglycerate mutase family protein...   214   3e-56

>AT1G78050.1 | Symbols: PGM | phosphoglycerate/bisphosphoglycerate
           mutase | chr1:29348095-29349592 FORWARD LENGTH=332
          Length = 332

 Score =  214 bits (546), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 103/145 (71%), Positives = 124/145 (85%), Gaps = 2/145 (1%)

Query: 64  IRSSTSQTSMVDT--VSSSPSRRNTSDTPKKSRKAALTPIRHGESLSNEKNLFTGCVNVP 121
           I ++ SQ S+VD   +S SPS+    ++ KKS +AAL  IRHGESL NEKNLFTGCV+VP
Sbjct: 45  IEATASQISVVDNTFLSPSPSKNKPHESKKKSNEAALILIRHGESLWNEKNLFTGCVDVP 104

Query: 122 LTEKGIDEAIEAGKRISNIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQAR 181
           LT+KG+ EAIEAGK+ISNIPVD+IFTS+LIRAQMTAMLAMTQHRR+KVPII+HNES +A+
Sbjct: 105 LTQKGVGEAIEAGKKISNIPVDLIFTSSLIRAQMTAMLAMTQHRRKKVPIILHNESVKAK 164

Query: 182 EWSQVFSEDTKKQSIPVITAWQLND 206
            WS VFSE+T+KQSIPVI AWQLN+
Sbjct: 165 TWSHVFSEETRKQSIPVIAAWQLNE 189


>AT1G22170.1 | Symbols:  | Phosphoglycerate mutase family protein |
           chr1:7826603-7828055 FORWARD LENGTH=334
          Length = 334

 Score =  214 bits (546), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 110/169 (65%), Positives = 134/169 (79%), Gaps = 6/169 (3%)

Query: 43  SKCLLRTGTKINSS-----RQRNCSAIRSSTSQTSMVDTVSSSPSRRNTSDTPKKSRKAA 97
           S  + + G KI+SS     ++ N   I++  S  S  +T+ S PS+    ++ KKS +AA
Sbjct: 21  SSTISQCGFKIDSSLSFTSKKTNFCKIKAMASSVSYDNTLLS-PSKTIPDNSQKKSNEAA 79

Query: 98  LTPIRHGESLSNEKNLFTGCVNVPLTEKGIDEAIEAGKRISNIPVDVIFTSALIRAQMTA 157
           L  IRHGESL NEKNLFTGCV+VPLTEKG++EAIEAGKRISNIPVDVIFTS+LIRAQMTA
Sbjct: 80  LILIRHGESLWNEKNLFTGCVDVPLTEKGVEEAIEAGKRISNIPVDVIFTSSLIRAQMTA 139

Query: 158 MLAMTQHRRRKVPIIMHNESEQAREWSQVFSEDTKKQSIPVITAWQLND 206
           MLAM QHRR+KVPII+H+ESEQA+ WSQVFS++TK QSIPVI AWQLN+
Sbjct: 140 MLAMIQHRRKKVPIILHDESEQAKTWSQVFSDETKNQSIPVIPAWQLNE 188