Miyakogusa Predicted Gene

Lj0g3v0105899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105899.1 tr|C1MSU1|C1MSU1_MICPC CorA metal ion transporter
family OS=Micromonas pusilla (strain CCMP1545)
GN=,46.15,0.00000000000002,SUBFAMILY NOT NAMED,NULL; RNA SPLICING
PROTEIN MRS2, MITOCHONDRIAL,Magnesium transporter
MRS2/LPE10;,CUFF.6042.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22830.1 | Symbols: ATMGT10, GMN10, MGT10, MRS2-11 | magnesiu...   230   7e-61

>AT5G22830.1 | Symbols: ATMGT10, GMN10, MGT10, MRS2-11 | magnesium
           (Mg) transporter 10 | chr5:7627676-7630633 FORWARD
           LENGTH=459
          Length = 459

 Score =  230 bits (586), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 111/132 (84%), Positives = 127/132 (96%)

Query: 108 LGIREPVYEVVEVKSNGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVRE 167
           LGIREPVYEVVEVK+ G +STRKINRRQLLKSSGLRPRDIRSVDPSLF+TNS+PSLLVRE
Sbjct: 123 LGIREPVYEVVEVKATGAISTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSVPSLLVRE 182

Query: 168 YAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFELEVVEA 227
           +AILLNLGSLRAIAM+D VLIFDYNR+GG+AF+++L+PRLNP++ NGGPSMPFELE VE+
Sbjct: 183 HAILLNLGSLRAIAMRDRVLIFDYNRRGGRAFVDTLMPRLNPRSMNGGPSMPFELEAVES 242

Query: 228 ALLSRIQRLEQR 239
           AL+SRIQRLEQR
Sbjct: 243 ALISRIQRLEQR 254