Miyakogusa Predicted Gene

Lj0g3v0105569.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105569.1 Non Chatacterized Hit- tr|K4BIC1|K4BIC1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.5,0.00000000000009,seg,NULL; DUF1674,Protein of unknown
function DUF1674,CUFF.6015.1
         (115 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67490.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...    62   7e-11

>AT5G67490.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1674
           (InterPro:IPR012875); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:26934368-26934694 REVERSE LENGTH=108
          Length = 108

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 29/30 (96%)

Query: 86  NKETGEVGGPKGPEPTRYGDWERNGRCSDF 115
           N++TGE+GGP+GPEPTRYGDWE+ GRCSDF
Sbjct: 79  NEDTGEIGGPRGPEPTRYGDWEQRGRCSDF 108