Miyakogusa Predicted Gene
- Lj0g3v0105239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0105239.1 tr|D7M989|D7M989_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,26.79,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopepti,CUFF.5993.1
(548 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 666 0.0
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-110
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 385 e-107
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 382 e-106
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 370 e-102
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 369 e-102
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 368 e-102
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-101
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 367 e-101
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 363 e-100
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 359 2e-99
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 7e-99
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 357 1e-98
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 357 1e-98
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 9e-98
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 1e-97
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 6e-96
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 347 1e-95
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 8e-95
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 9e-95
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 341 8e-94
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 2e-93
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 8e-92
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 332 4e-91
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 6e-91
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 7e-91
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 331 9e-91
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 330 1e-90
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 330 1e-90
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 5e-90
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 5e-90
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 8e-90
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 4e-88
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 9e-88
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 321 1e-87
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 316 2e-86
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 314 1e-85
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 314 1e-85
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 311 5e-85
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 311 6e-85
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 7e-85
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 7e-85
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 310 2e-84
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 310 2e-84
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 5e-83
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 3e-82
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 301 6e-82
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 5e-81
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 5e-81
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 9e-81
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 2e-80
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 296 4e-80
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 294 9e-80
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 1e-78
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 5e-78
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 286 2e-77
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 2e-77
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 4e-77
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 4e-77
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 6e-77
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 3e-75
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 3e-75
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 276 3e-74
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 273 2e-73
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 272 4e-73
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 5e-72
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 9e-72
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 268 1e-71
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 2e-71
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 266 4e-71
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 4e-71
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 9e-71
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 6e-70
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 1e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 6e-68
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 6e-66
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 7e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 8e-65
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 244 1e-64
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 1e-63
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 222 7e-58
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 214 2e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 106 4e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 96 7e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 3e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 86 7e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 1e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 2e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 78 2e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 78 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 2e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 76 7e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 7e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 76 8e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 9e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 1e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 3e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 3e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 4e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 9e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 57 3e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 5e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 8e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 1e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 6e-06
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/532 (59%), Positives = 415/532 (78%), Gaps = 1/532 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG-ENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
M+SGYA+ G +EAI++F E+EEG ++++V T++LS L T ++ GRQ+H + +K
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
NGLL V+++NALVT+Y+KC SL++A + F+ SG++NSITWSAMVTGY+Q+G+S +A++L
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M +G+ PSE+T+VGV+NACSD+C + EG+Q+H + LKLGF L+ ++LVDMYAK
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G LADAR+GF+ +Q+ DV LWTS+I+GYVQN D E AL LY +M+ IIPN+ TMASV
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASV 429
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
LKACSSLA L+ GKQ+H IK+GF LEVP+GSALS MY+KCGSL+DG L+F R P +DV
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDV 489
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SWNAMISGLS NG G++ALELF++ML EG +PD VTFVN++SACSH G V+RGW YF M
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNM 549
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
MSD+ + P V+HYACMVD+LSRAG+L EAKEFIESA +DHGLCLWRILL C+NH +
Sbjct: 550 MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+G YAGEKLM LGS ESS YV LS IYTALG+ DVE V + M+A GV+KE GCSWIELK
Sbjct: 610 LGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELK 669
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDL 531
+ HVFVVGD+MHP I+E + + L+++ M +EG+ LDS E G L
Sbjct: 670 NQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEGTQL 721
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 195/358 (54%), Gaps = 6/358 (1%)
Query: 1 MLSGYASLG---LAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLA 57
+++GY+ G + ++LF +MR ++ N + L I + + GRQ H+L
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDIL-PNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
+K + V +LV +Y K G ++D L+ F + +N+ TWS MV+GYA G E+A+
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 118 RLFHSM--HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
++F+ S++ V+++ + + GRQ+H ++K G + + ++LV
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 176 MYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
MY+KC SL +A + F+ + + W++++TGY QNG+ A+ L+ +M I P+E T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+ VL ACS + L++GKQ+H+ ++K GF + +AL MYAK G L D F +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
RDV W ++ISG QN +AL L+ +M G P+ T ++L ACS + ++ G
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 197/373 (52%), Gaps = 13/373 (3%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L GR VH ++ G + + AN LV YAKCG L A F K+ ++W++++TG
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 107 YAQSG---DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF 163
Y+Q+G S ++LF M +LP+ +TL G+ A S L + GRQ H +K+
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 164 GLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGK 223
+YV +SLV MY K G + D + F Y+ + + W+++++GY G E A+ ++
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 224 M--QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKC 281
+ E ++ +VL + ++ + G+Q+H IK G V + +AL MY+KC
Sbjct: 210 FLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 282 GSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLL 341
SL++ +F R+ I+W+AM++G SQNG +A++LF +M G KP T V +L
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 342 SACSHMGLVDRG---WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV 398
+ACS + ++ G + + E + T +VD+ ++AG L +A++ + +
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATT----ALVDMYAKAGCLADARKGFDCLQ- 384
Query: 399 DHGLCLWRILLGG 411
+ + LW L+ G
Sbjct: 385 ERDVALWTSLISG 397
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P TL+ + S +V GR +HG ++ G + + LV+ YAKCG LA A
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGA---LNLYGKMQIERIIPNELTMASVLKACSSL 246
F + DVV W S+ITGY QNG + + L+ +M+ + I+PN T+A + KA SSL
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 247 AALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMI 306
+ G+Q HA ++K ++ V ++L MY K G ++DG +F MP R+ +W+ M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 307 SGLSQNGHGNKALELFDKMLL---EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
SG + G +A+++F+ L EG+ D V F +LS+ + V G ++ +
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQ-IHCITIK 249
Query: 364 FDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+ V +V + S+ LNEA + +S+ D W ++ G
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSG-DRNSITWSAMVTG 296
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/565 (40%), Positives = 331/565 (58%), Gaps = 43/565 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGE--NEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
M+SG+A +EA+ F M +EG NE+ S+LS + ++ G QVHSL
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMH---KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K+ LS V + +ALV +Y+KCG+++DA R F+ G++N ++W++++T + Q+G + +AL
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS-SLVDMY 177
+F M S V P E TL VI+AC+ L AI G+++HG +K +LS + VDMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 178 AKCGSLADARRGFE-------------------------------YVQQPDVVLWTSIIT 206
AKC + +AR F+ + + +VV W ++I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
GY QNG+ E AL+L+ ++ E + P + A++LKAC+ LA L G Q H ++K+GF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 267 E------VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALE 320
+ + VG++L MY KCG +++GYL+F +M RD +SWNAMI G +QNG+GN+ALE
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 321 LFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDIL 380
LF +ML G KPD +T + +LSAC H G V+ G YF M+ +F + P +HY CMVD+L
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 381 SRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYV 440
RAG L EAK IE + +W LL C+ HRN +G Y EKL+E+ S YV
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 441 LLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRS 500
LLS++Y LG+WEDV VR+ M+ GV K+PGCSWI+++ HVF+V D HP+ +I S
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHS 659
Query: 501 ELRLLTKLMKDEGYQPHLDSLPESE 525
L +L M+ E + SL E
Sbjct: 660 LLDILIAEMRPEQDHTEIGSLSSEE 684
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 188/367 (51%), Gaps = 68/367 (18%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKN-------------- 96
R VH+ +K+G + + + N L+ Y+KCGSL+D + F+ +N
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 97 -----------------SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI 139
TW++MV+G+AQ E+AL F MH G + +E++ V+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 140 NACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVV 199
+ACS L + +G Q+H K F +Y+ S+LVDMY+KCG++ DA+R F+ + +VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 200 LWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGI 259
W S+IT + QNG AL+++ M R+ P+E+T+ASV+ AC+SL+A+ G+++H +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 260 IKY-GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI------------------ 300
+K ++ + +A MYAKC + + IF MP R+VI
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 301 -------------SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS-- 345
SWNA+I+G +QNG +AL LF + E P +F N+L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 346 ---HMGL 349
H+G+
Sbjct: 400 AELHLGM 406
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 36/207 (17%)
Query: 236 MASVLKAC--SSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF-- 291
A +L +C S L+A+ + +HA +IK GF+ E+ + + L Y+KCGSL+DG +F
Sbjct: 22 FAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 292 --------WR---------------------MPTRDVISWNAMISGLSQNGHGNKALELF 322
W MP RD +WN+M+SG +Q+ +AL F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
M EG + +F ++LSACS + +++G +++ V + +VD+ S+
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS-PFLSDVYIGSALVDMYSK 199
Query: 383 AGKLNEAKEFIESAEVDHGLCLWRILL 409
G +N+A+ + D + W L+
Sbjct: 200 CGNVNDAQRVFDEMG-DRNVVSWNSLI 225
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/521 (39%), Positives = 326/521 (62%), Gaps = 5/521 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQM-RCEEEEGENEFVLTSILSDLNR-TEFLDTGRQVHSLAM 58
+++G A GL EA+ LF Q+ RC + +++ +TS+L + E L +QVH A+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKP--DQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K +S V+ AL+ Y++ + +A FE N + + W+AM+ GY QS D K L+
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLK 503
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF MH G +FTL V C L AI +G+Q+H Y++K G+ L L+V S ++DMY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG ++ A+ F+ + PD V WT++I+G ++NG+ E A +++ +M++ ++P+E T+A+
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+ KA S L AL+QG+Q+HA +K + VG++L MYAKCGS+DD Y +F R+ +
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 683
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ +WNAM+ GL+Q+G G + L+LF +M G KPD VTF+ +LSACSH GLV + + +
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMR 743
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M ++ I P +EHY+C+ D L RAG + +A+ IES ++ ++R LL CR +
Sbjct: 744 SMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDT 803
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+ G KL+EL +SSAYVLLS++Y A +W++++L R MMK V K+PG SWIE+
Sbjct: 804 ETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEV 863
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLD 519
K+ +H+FVV D + Q + I +++ + + +K EGY P D
Sbjct: 864 KNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETD 904
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 201/422 (47%), Gaps = 24/422 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++ Y G KE LFE+M + N +L + L + E +D HS +
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWN-LMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMV------TGYAQSGDSE 114
+++ +A G DA + F+ ++ + S ++ + Y SG
Sbjct: 245 NEITLRLLARI-------SGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
L+ F M S V + T + ++ + ++ G+Q+H +LKLG L L V +SL+
Sbjct: 298 ALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLI 357
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER--IIPN 232
+MY K AR F+ + + D++ W S+I G QNG A+ L+ MQ+ R + P+
Sbjct: 358 NMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPD 415
Query: 233 ELTMASVLKACSSLA-ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
+ TM SVLKA SSL L KQ+H IK + V +AL Y++ + + ++F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 292 WRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
R D+++WNAM++G +Q+ G+K L+LF M +G + D T + C + ++
Sbjct: 476 ER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 352 RGWD-YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+G + + +D+ V + ++D+ + G ++ A+ +S V + W ++
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMIS 591
Query: 411 GC 412
GC
Sbjct: 592 GC 593
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 173/407 (42%), Gaps = 49/407 (12%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
++A LF +R ++ + L+ +L + ++ H A K GL VA A
Sbjct: 127 QQAFLLFRILR-QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPS 131
LV +Y K G + + FE ++ + W+ M+ Y + G E+A+ L + H SG+ P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 132 EFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE 191
E TL L A + G + G + G +
Sbjct: 246 EITL--------RLLARISGDD------------------------SDAGQVKSFANGND 273
Query: 192 YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQ 251
+++ ++ Y+ +G + L + M + +++T +L + +L
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ 311
G+Q+H +K G +L + V ++L MY K +F M RD+ISWN++I+G++Q
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 312 NGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM--GL-----VDRGWDYFKMMSDEF 364
NG +A+ LF ++L G KPD T ++L A S + GL V +SD F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 365 DITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
T ++ Y SR + EA+ E D L W ++ G
Sbjct: 454 VSTALIDAY-------SRNRCMKEAEILFERHNFD--LVAWNAMMAG 491
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G+ H L + +++++L+ MY+KCGSL ARR F+ + D+V W SI+ Y Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 211 NG-----DFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN 265
+ + + A L+ ++ + + + +T++ +LK C + + H K G +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
+ V AL +Y K G + +G ++F MP RDV+ WN M+ + G +A++L
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 326 LLEGTKPDTVTF 337
G P+ +T
Sbjct: 238 HSSGLNPNEITL 249
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 37/278 (13%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDS-----EKALRLFHSMH 124
N L+++Y+KCGSL A R F+ +++ ++W++++ YAQS + ++A LF +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 125 CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLA 184
V S TL ++ C + HGY+ K+G +V +LV++Y K G +
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
+ + FE + DVVLW ++ Y++ G E A++L + PNE+T+
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL-------- 249
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
L A G AG +K N G+ S++ ++I N
Sbjct: 250 RLLARISGDDSDAGQVKSFAN-----GNDASSV-------------------SEIIFRNK 285
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
+S +G + L+ F M+ + D VTF+ +L+
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLA 323
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 33/176 (18%)
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ 311
GK HA I+ + N E + + L +MY+KCGSL +F +MP RD++SWN++++ +Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 312 NGHG-----NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDI 366
+ +A LF + + +T +L C H G V W
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV---W-----------A 163
Query: 367 TPTVEHYAC-------------MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
+ + YAC +V+I + GK+ E K E + LW ++L
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLML 218
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 304/514 (59%), Gaps = 1/514 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
ML Y L + + +F QM+ EE N++ SIL R L+ G Q+HS +K
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
V + L+ +YAK G LD A K+ ++W+ M+ GY Q +KAL F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G+ E L ++AC+ L A+ EG+Q+H + GF L ++LV +Y++C
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + ++ FE + D + W ++++G+ Q+G+ E AL ++ +M E I N T S +
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
KA S A + QGKQ+HA I K G++ E V +AL +MYAKCGS+ D F + T++ +
Sbjct: 700 KAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 759
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SWNA+I+ S++G G++AL+ FD+M+ +P+ VT V +LSACSH+GLVD+G YF+ M
Sbjct: 760 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+ E+ ++P EHY C+VD+L+RAG L+ AKEFI+ + +WR LL C H+N +I
Sbjct: 820 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 879
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G +A L+EL +S+ YVLLS++Y +W+ +L R+ MK +GV KEPG SWIE+K+
Sbjct: 880 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
+H F VGD HP DEI + LTK + GY
Sbjct: 940 SIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 209/417 (50%), Gaps = 3/417 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG + EAI LF M + +S+LS + E L+ G Q+H L +K
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S V NALV+LY G+L A F ++++T++ ++ G +Q G EKA+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
MH G+ P TL ++ ACS + G+Q+H Y+ KLGF + +L+++YAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ A F + +VVLW ++ Y D + ++ +MQIE I+PN+ T S+L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
K C L L+ G+Q+H+ IIK F L V S L MYAK G LD + I R +DV+
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SW MI+G +Q +KAL F +ML G + D V N +SAC+ + + G
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
+ + +V + SR GK+ E+ E E + W L+ G + N
Sbjct: 618 CVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 197/393 (50%), Gaps = 9/393 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEF-LDTGRQVHSLAMK 59
M+ AS L E LF +M E NE + +L D Q+H+ +
Sbjct: 157 MIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY 215
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL V N L+ LY++ G +D A R F+ K+ +W AM++G +++ +A+RL
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M+ G++P+ + V++AC + ++ G Q+HG LKLGF YV ++LV +Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G+L A F + Q D V + ++I G Q G E A+ L+ +M ++ + P+ T+AS+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ ACS+ L +G+Q+HA K GF + AL +YAKC ++ F +V
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFK 358
+ WN M+ + +F +M +E P+ T+ ++L C +G ++ G + +
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 359 MMSDEFDITPTVEHYAC--MVDILSRAGKLNEA 389
++ F + Y C ++D+ ++ GKL+ A
Sbjct: 516 IIKTNFQLNA----YVCSVLIDMYAKLGKLDTA 544
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 208/415 (50%), Gaps = 12/415 (2%)
Query: 3 SGYASLGLAKEAIELFEQMRCEEEEGE----NEFVLTSILSDLNRTE-FLDTGRQVHSLA 57
+ +A++ + E F++ R + E N L +L +T LD GR++HS
Sbjct: 52 ASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI 111
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
+K GL S ++ L Y G L A + F+ + TW+ M+ A +
Sbjct: 112 LKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVF 171
Query: 118 RLFHSMHCSGVLPSEFTLVGVINAC---SDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
LF M V P+E T GV+ AC S +VE Q+H L G V + L+
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--QIHARILYQGLRDSTVVCNPLI 229
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
D+Y++ G + ARR F+ ++ D W ++I+G +N A+ L+ M + I+P
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
+SVL AC + +L+ G+Q+H ++K GF+ + V +AL ++Y G+L IF M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
RD +++N +I+GLSQ G+G KA+ELF +M L+G +PD+ T +L+ ACS G + RG
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG- 408
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
+ + + ++++ ++ + A ++ EV++ + LW ++L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN-VVLWNVML 462
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 316/517 (61%), Gaps = 2/517 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY S GLA++ + +F QM E + + S+ + + + GR VHS+ +K
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLA-TIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
N L+ +Y+KCG LD A F +++ +++++M+ GYA+ G + +A++LF
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G+ P +T+ V+N C+ + EG+++H + + G ++V ++L+DMYAKC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-QIERIIPNELTMASV 239
GS+ +A F ++ D++ W +II GY +N AL+L+ + + +R P+E T+A V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L AC+SL+A D+G+++H I++ G+ + V ++L MYAKCG+L +++F + ++D+
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW MI+G +G G +A+ LF++M G + D ++FV+LL ACSH GLVD GW +F +
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI 625
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M E I PTVEHYAC+VD+L+R G L +A FIE+ + +W LL GCR H +
Sbjct: 626 MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK 685
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+ EK+ EL + YVL+++IY +WE V+ +R+ + RG+ K PGCSWIE+K
Sbjct: 686 LAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK 745
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
V++FV GDS +P+ + I + LR + M +EGY P
Sbjct: 746 GRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 186/341 (54%), Gaps = 2/341 (0%)
Query: 14 AIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALV 73
+I LF++M E ++ + + + + + G Q+H +K+G SV N+LV
Sbjct: 179 SIGLFKKMMSSGVEMDS-YTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 74 TLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEF 133
Y K +D A + F+ ++ I+W++++ GY +G +EK L +F M SG+
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
T+V V C+D I GR +H +K F + ++L+DMY+KCG L A+ F +
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
VV +TS+I GY + G A+ L+ +M+ E I P+ T+ +VL C+ LD+GK
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNG 313
++H I + ++ V +AL MYAKCGS+ + L+F M +D+ISWN +I G S+N
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 314 HGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVDRG 353
+ N+AL LF+ +L E PD T +L AC+ + D+G
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 203/399 (50%), Gaps = 14/399 (3%)
Query: 33 VLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFS 92
L S+L ++ L G++V + NG + ++ + L +Y CG L +A R F+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 93 GNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR 152
+ ++ W+ ++ A+SGD ++ LF M SGV +T V + S L ++ G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG 212
Q+HG+ LK GFG + V +SLV Y K + AR+ F+ + + DV+ W SII GYV NG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 213 DFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGS 272
E L+++ +M + I + T+ SV C+ + G+ +H+ +K F+ E +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 273 ALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
L MY+KCG LD +F M R V+S+ +MI+G ++ G +A++LF++M EG P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 333 DTVTFVNLLSACSHMGLVDRGWDYFKMMSDE---FDITPTVEHYACMVDILSRAGKLNEA 389
D T +L+ C+ L+D G + + + FDI + ++D+ ++ G + EA
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEA 451
Query: 390 KEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKL 428
E + S + W ++GG Y YA E L
Sbjct: 452 -ELVFSEMRVKDIISWNTIIGG------YSKNCYANEAL 483
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 157/309 (50%), Gaps = 11/309 (3%)
Query: 84 DALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS 143
D++ TF+ ++ + + + +SG+ E A++L + P TL V+ C+
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCA 105
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTS 203
D ++ +G+++ + GF + + S L MY CG L +A R F+ V+ + W
Sbjct: 106 DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNI 165
Query: 204 IITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
++ ++GDF G++ L+ KM + + T + V K+ SSL ++ G+Q+H I+K G
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSG 225
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFD 323
F VG++L A Y K +D +F M RDVISWN++I+G NG K L +F
Sbjct: 226 FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFV 285
Query: 324 KMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC--MVDILS 381
+ML+ G + D T V++ + C+ L+ G + S + E C ++D+ S
Sbjct: 286 QMLVSGIEIDLATIVSVFAGCADSRLISLGR---AVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 382 RAGKLNEAK 390
+ G L+ AK
Sbjct: 343 KCGDLDSAK 351
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 310/524 (59%), Gaps = 8/524 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ +G +EAI F M E + +F L+S+ S E L G+Q+HS A+++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESD-KFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 61 GLLSIVSVANALVTLYAKC---GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD-SEKA 116
GL+ V + LV +YAKC GS+DD + F+ + + ++W+A++TGY ++ + + +A
Sbjct: 299 GLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 117 LRLFHSMHCSG-VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
+ LF M G V P+ FT AC +L G+Q+ G + K G V +S++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 176 MYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
M+ K + DA+R FE + + ++V + + + G +N +FE A L ++ + + T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
AS+L +++ ++ +G+Q+H+ ++K G + PV +AL +MY+KCGS+D +F M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
R+VISW +MI+G +++G + LE F++M+ EG KP+ VT+V +LSACSH+GLV GW
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
+F M ++ I P +EHYACMVD+L RAG L +A EFI + + +WR LG CR H
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
N ++G A K++EL E +AY+ LS+IY G+WE+ +RR MK R + KE GCSW
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716
Query: 476 IELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLD 519
IE+ +H F VGD+ HP +I EL L +K GY P D
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTD 760
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 215/424 (50%), Gaps = 16/424 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ Y + G +AI++F + E N++ T+++ + ++F+ GR MK
Sbjct: 137 MMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT 195
Query: 61 GLL-SIVSVANALVTLYAKC-GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
G S V V +L+ ++ K S ++A + F+ N +TW+ M+T Q G +A+R
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
F M SG +FTL V +AC++L + G+Q+H ++++ GL V SLVDMYA
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS--GLVDDVECSLVDMYA 313
Query: 179 KC---GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEG-ALNLYGKMQIE-RIIPNE 233
KC GS+ D R+ F+ ++ V+ WT++ITGY++N + A+NL+ +M + + PN
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
T +S KAC +L+ GKQ+ K G V +++ +M+ K ++D F
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+ ++++S+N + G +N + +A +L ++ TF +LLS +++G + +G
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Query: 354 WDYFKMMSDEFDITPTVEHYAC--MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
++ S + + C ++ + S+ G ++ A E + + W ++ G
Sbjct: 494 E---QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITG 549
Query: 412 CRNH 415
H
Sbjct: 550 FAKH 553
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 198/397 (49%), Gaps = 23/397 (5%)
Query: 33 VLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCG---SLDDALRTF 89
+S+L R G+ VH+ ++ + + N+L++LY+K G +D T
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
G ++ ++WSAM+ Y +G A+++F G++P+++ VI ACS+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 150 EGRQMHGYSLKLG-FGLQLYVLSSLVDMYAKC-GSLADARRGFEYVQQPDVVLWTSIITG 207
GR G+ +K G F + V SL+DM+ K S +A + F+ + + +VV WT +IT
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 208 YVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
+Q G A+ + M + ++ T++SV AC+ L L GKQ+H+ I+ G L
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG--LV 301
Query: 268 VPVGSALSAMYAKC---GSLDDGYLIFWRMPTRDVISWNAMISGLSQNGH-GNKALELFD 323
V +L MYAKC GS+DD +F RM V+SW A+I+G +N + +A+ LF
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 324 KMLLEG-TKPDTVTFVNLLSACSHM-----GLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
+M+ +G +P+ TF + AC ++ G G + + ++ + +V +
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV------I 415
Query: 378 DILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
+ ++ ++ +A+ ES + + L G CRN
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 322/587 (54%), Gaps = 67/587 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY ++G +AI + M E E +F LT++L+ + T ++TG++VHS +K
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATRCMETGKKVHSFIVKL 175
Query: 61 GLLSIVSVANALVTLYAKCG-------------------------------SLDDALRTF 89
GL VSV+N+L+ +YAKCG +D A+ F
Sbjct: 176 GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQF 235
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL-PSEFTLVGVINACSDLCAI 148
E ++ +TW++M++G+ Q G +AL +F M +L P FTL V++AC++L +
Sbjct: 236 EQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKL 295
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY---------------- 192
G+Q+H + + GF + VL++L+ MY++CG + ARR E
Sbjct: 296 CIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLD 355
Query: 193 -----------------VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
++ DVV WT++I GY Q+G + A+NL+ M PN T
Sbjct: 356 GYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYT 415
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+A++L SSLA+L GKQ+H +K G V V +AL MYAK G++ F +
Sbjct: 416 LAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 296 T-RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
RD +SW +MI L+Q+GH +ALELF+ ML+EG +PD +T+V + SAC+H GLV++G
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
YF MM D I PT+ HYACMVD+ RAG L EA+EFIE ++ + W LL CR
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 415 HRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
H+N D+G A E+L+ L S AY L+++Y+A G+WE+ +R+ MK V KE G S
Sbjct: 596 HKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 475 WIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSL 521
WIE+K VHVF V D HP+ +EI ++ + +K GY P S+
Sbjct: 656 WIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 167/336 (49%), Gaps = 65/336 (19%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N +++ Y+K G +D F+ ++S++W+ M+ GY G KA+R+ M G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR-- 187
P++FTL V+ + + + G+++H + +KLG + V +SL++MYAKCG A+
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 188 -----------------------------RGFEYVQQPDVVLWTSIITGYVQNGDFEGAL 218
FE + + D+V W S+I+G+ Q G AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 219 NLYGKMQIERII-PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM 277
+++ KM + ++ P+ T+ASVL AC++L L GKQ+H+ I+ GF++ V +AL +M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 278 YAKCGSLD-----------------------DGYL----------IFWRMPTRDVISWNA 304
Y++CG ++ DGY+ IF + RDV++W A
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
MI G Q+G +A+ LF M+ G +P++ T +
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 149/310 (48%), Gaps = 45/310 (14%)
Query: 123 MHC----SGVLPSEFTLVGVINACSDLCAIVEGRQMHG-YSLKLGFGLQLYVLSSLVDMY 177
+HC SG++ S + + ++N S + R++ L+ F ++++ Y
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSW-----NTVLSAY 90
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
+K G + F+ + Q D V WT++I GY G + A+ + G M E I P + T+
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
+VL + ++ ++ GK++H+ I+K G V V ++L MYAKCG +F RM R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 298 DVISWNA-------------------------------MISGLSQNGHGNKALELFDKML 326
D+ SWNA MISG +Q G+ +AL++F KML
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 327 LEG-TKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDEFDITPTVEHYACMVDILSRAG 384
+ PD T ++LSAC+++ + G + +++ FDI+ V + ++ + SR G
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN--ALISMYSRCG 328
Query: 385 KLNEAKEFIE 394
+ A+ IE
Sbjct: 329 GVETARRLIE 338
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 309/518 (59%), Gaps = 15/518 (2%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVS-VANA 71
EA+E +M E E +EF ++S+L + E L TG+++H+ A+KNG L S V +A
Sbjct: 285 EALEYLREMVLEGVE-PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH-CSGVLP 130
LV +Y C + R F+ ++ W+AM+ GY+Q+ ++AL LF M +G+L
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 131 SEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF 190
+ T+ GV+ AC A +HG+ +K G +V ++L+DMY++ G + A R F
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 191 EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ-IERII----------PNELTMASV 239
++ D+V W ++ITGYV + E AL L KMQ +ER + PN +T+ ++
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L +C++L+AL +GK++HA IK +V VGSAL MYAKCG L +F ++P ++V
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV 583
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
I+WN +I +G+G +A++L M+++G KP+ VTF+++ +ACSH G+VD G F +
Sbjct: 584 ITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV 643
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC-LWRILLGGCRNHRNY 418
M ++ + P+ +HYAC+VD+L RAG++ EA + + D W LLG R H N
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+IG A + L++L +S YVLL++IY++ G W+ VRR MK +GV KEPGCSWIE
Sbjct: 704 EIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEH 763
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
VH FV GDS HPQ +++ L L + M+ EGY P
Sbjct: 764 GDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 801
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 197/399 (49%), Gaps = 31/399 (7%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGL-LSIVSVANALVTLYAKCGSLDDALRT 88
+ + ++L + + ++ G+Q+H+ K G + V+VAN LV LY KCG +
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC-- 146
F+ +N ++W+++++ E AL F M V PS FTLV V+ ACS+L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 147 -AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSII 205
++ G+Q+H Y L+ G L +++++LV MY K G LA ++ D+V W +++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 206 TGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG-F 264
+ QN AL +M +E + P+E T++SVL ACS L L GK++HA +K G
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
+ VGSAL MY C + G +F M R + WNAMI+G SQN H +AL LF
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 325 MLLE-GTKPDTVTFVNLLSACSHMG-----------LVDRGWDYFKMMSDEFDITPTVEH 372
M G ++ T ++ AC G +V RG D + + +
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN---------- 444
Query: 373 YACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
++D+ SR GK++ A E D L W ++ G
Sbjct: 445 --TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 186/381 (48%), Gaps = 23/381 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
M++GY+ KEA+ LF M EE G N + ++ R+ +H +
Sbjct: 375 MIAGYSQNEHDKEALLLFIGM--EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K GL V N L+ +Y++ G +D A+R F +++ +TW+ M+TGY S E AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 119 LFHSMHC-----------SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL 167
L H M + P+ TL+ ++ +C+ L A+ +G+++H Y++K +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
V S+LVDMYAKCG L +R+ F+ + Q +V+ W II Y +G+ + A++L M ++
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 228 RIIPNELTMASVLKACSSLAALDQG-KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
+ PNE+T SV ACS +D+G + + YG + + + + G + +
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 287 GYLIFWRMPTRDVI---SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVT-FVNLLS 342
Y + MP RD +W++++ + H N + L +P+ + +V L +
Sbjct: 673 AYQLMNMMP-RDFNKAGAWSSLLG--ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 343 ACSHMGLVDRGWDYFKMMSDE 363
S GL D+ + + M ++
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQ 750
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 100 WSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL 159
W ++ +S +A+ + M G+ P + ++ A +DL + G+Q+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 160 KLGFGL-QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGAL 218
K G+G+ + V ++LV++Y KCG + F+ + + + V W S+I+ +E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 219 NLYGKMQIERIIPNELTMASVLKACSSLA---ALDQGKQMHAGIIKYGFNLEVPVGSALS 275
+ M E + P+ T+ SV+ ACS+L L GKQ+HA ++ G L + + L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 276 AMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTV 335
AMY K G L ++ RD+++WN ++S L QN +ALE +M+LEG +PD
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 336 TFVNLLSACSHMGLVDRGWDY--FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
T ++L ACSH+ ++ G + + + + D V + +VD+ ++ +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG--SALVDMYCNCKQVLSGRRVF 361
Query: 394 ESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
+ D + LW ++ G Y + E L+ E SA +L +S A
Sbjct: 362 DGM-FDRKIGLWNAMIAG------YSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 21/263 (7%)
Query: 201 WTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII 260
W ++ V++ A+ Y M + I P+ ++LKA + L ++ GKQ+HA +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 261 KYGFNLE-VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKAL 319
K+G+ ++ V V + L +Y KCG Y +F R+ R+ +SWN++IS L AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 320 ELFDKMLLEGTKPDTVTFVNLLSACSH--------MGLVDRGWDYFKMMSDEFDITPTVE 371
E F ML E +P + T V++++ACS+ MG + K + F I V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG-CRNHRNYDIGAYAGEKLME 430
Y + GKL +K + S L W +L C+N + + Y E ++E
Sbjct: 245 MYG-------KLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 431 LGSPESSAYVLLSSIYTALGQWE 453
P+ +SS+ A E
Sbjct: 297 GVEPDE---FTISSVLPACSHLE 316
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/516 (36%), Positives = 307/516 (59%), Gaps = 1/516 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY+ G+A+ A+E+ + M CEE + + S+L ++ + G+++H AM++
Sbjct: 207 IVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S+V+++ ALV +YAKCGSL+ A + F+ +N ++W++M+ Y Q+ + ++A+ +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M GV P++ +++G ++AC+DL + GR +H S++LG + V++SL+ MY KC
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ A F +Q +V W ++I G+ QNG ALN + +M+ + P+ T SV+
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
A + L+ K +H +++ + V V +AL MYAKCG++ LIF M R V
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+WNAMI G +G G ALELF++M KP+ VTF++++SACSH GLV+ G F MM
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+ + I +++HY MVD+L RAG+LNEA +FI V + ++ +LG C+ H+N +
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
A E+L EL + +VLL++IY A WE V VR M +G+ K PGCS +E+K+
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
VH F G + HP +I + L L +K+ GY P
Sbjct: 686 EVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVP 721
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 229/416 (55%), Gaps = 5/416 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
ML G+A + +A++ F +MR ++ E + T +L L G+++H L +K+
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVE-PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + L +YAKC +++A + F+ ++ ++W+ +V GY+Q+G + AL +
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
SM + PS T+V V+ A S L I G+++HGY+++ GF + + ++LVDMYAKC
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
GSL AR+ F+ + + +VV W S+I YVQN + + A+ ++ KM E + P ++++ L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC+ L L++G+ +H ++ G + V V ++L +MY KC +D +F ++ +R ++
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG-WDYFKM 359
SWNAMI G +QNG AL F +M KPDT T+V++++A + + + W + +
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
M D V +VD+ ++ G + A+ + H + W ++ G H
Sbjct: 465 MRSCLDKNVFVT--TALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTH 517
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 218/412 (52%), Gaps = 6/412 (1%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITW 100
L R L RQ+ L KNGL LV+L+ + GS+D+A R FE +K ++ +
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
M+ G+A+ D +KAL+ F M V P + ++ C D + G+++HG +K
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 161 LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
GF L L+ ++ L +MYAKC + +AR+ F+ + + D+V W +I+ GY QNG AL +
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 221 YGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK 280
M E + P+ +T+ SVL A S+L + GK++H ++ GF+ V + +AL MYAK
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 281 CGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
CGSL+ +F M R+V+SWN+MI QN + +A+ +F KML EG KP V+ +
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 341 LSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH 400
L AC+ +G ++RG + +S E + V ++ + + +++ A +
Sbjct: 344 LHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SR 401
Query: 401 GLCLWR-ILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQ 451
L W ++LG +N R D Y + P++ YV S+ TA+ +
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV---SVITAIAE 450
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 297/546 (54%), Gaps = 30/546 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ GL A++ + M + L ++L + + G+Q+H +K
Sbjct: 109 LIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 168
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-----------------------------F 91
G S + V + L+ +YA G + DA + F F
Sbjct: 169 GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF 228
Query: 92 SG-NKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVE 150
G K+S++W+AM+ G AQ+G +++A+ F M G+ ++ V+ AC L AI E
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G+Q+H ++ F +YV S+L+DMY KC L A+ F+ ++Q +VV WT+++ GY Q
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
G E A+ ++ MQ I P+ T+ + AC+++++L++G Q H I G V V
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
++L +Y KCG +DD +F M RD +SW AM+S +Q G + ++LFDKM+ G
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK 390
KPD VT ++SACS GLV++G YFK+M+ E+ I P++ HY+CM+D+ SR+G+L EA
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 391 EFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALG 450
FI W LL CRN N +IG +A E L+EL + Y LLSSIY + G
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKG 588
Query: 451 QWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
+W+ V +RR M+ + V KEPG SWI+ K +H F D P +D+I ++L L +
Sbjct: 589 KWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKII 648
Query: 511 DEGYQP 516
D GY+P
Sbjct: 649 DNGYKP 654
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 180/365 (49%), Gaps = 42/365 (11%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM--HCSG 127
N L+ Y+K G + + TFE +++ +TW+ ++ GY+ SG A++ +++M S
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR 187
L + TL+ ++ S + G+Q+HG +KLGF L V S L+ MYA G ++DA+
Sbjct: 136 NL-TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 188 RGF-------------------------EYVQ-----QPDVVLWTSIITGYVQNGDFEGA 217
+ F + +Q + D V W ++I G QNG + A
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 218 LNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM 277
+ + +M+++ + ++ SVL AC L A+++GKQ+HA II+ F + VGSAL M
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 278 YAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
Y KC L +F RM ++V+SW AM+ G Q G +A+++F M G PD T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC----MVDILSRAGKLNEAKEFI 393
+SAC+++ ++ G + IT + HY +V + + G ++++
Sbjct: 375 GQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 394 ESAEV 398
V
Sbjct: 430 NEMNV 434
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
L+ ++L+ Y+K G +++ FE + D V W +I GY +G A+ Y M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 226 IERIIP-NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ +T+ ++LK SS + GKQ+H +IK GF + VGS L MYA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 285 DDGYLIFWRMPTR------------------------------DVISWNAMISGLSQNGH 314
D +F+ + R D +SW AMI GL+QNG
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 315 GNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+A+E F +M ++G K D F ++L AC +G ++ G
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 317/583 (54%), Gaps = 55/583 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ YA LG K A+E+F +M E + L ++L G+Q+H A+ +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
++ + V N LV +YAKCG +D+A F K+ ++W+AMV GY+Q G E A+RLF
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 121 HSMH-----------------------------------CSGVLPSEFTLVGVINACSDL 145
M SG+ P+E TL+ V++ C+ +
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 146 CAIVEGRQMHGYSLKL-------GFGLQLYVLSSLVDMYAKCGSLADARRGFEYV--QQP 196
A++ G+++H Y++K G G + V++ L+DMYAKC + AR F+ + ++
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIE--RIIPNELTMASVLKACSSLAALDQGKQ 254
DVV WT +I GY Q+GD AL L +M E + PN T++ L AC+SLAAL GKQ
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 255 MHAGIIKYGFNLEVP--VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
+HA ++ N VP V + L MYAKCGS+ D L+F M ++ ++W ++++G +
Sbjct: 499 IHAYALRNQQN-AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
G+G +AL +FD+M G K D VT + +L ACSH G++D+G +YF M F ++P EH
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 373 YACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG 432
YAC+VD+L RAG+LN A IE ++ +W L CR H ++G YA EK+ EL
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELA 677
Query: 433 SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMH 492
S +Y LLS++Y G+W+DV +R +M+ +GV K PGCSW+E F VGD H
Sbjct: 678 SNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTH 737
Query: 493 PQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQE 535
P EI L + +KD GY +PE+ D+ D+E
Sbjct: 738 PHAKEIYQVLLDHMQRIKDIGY------VPETGFALHDVDDEE 774
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 168/313 (53%), Gaps = 6/313 (1%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDA---LRTFEFSGNKNS 97
+++ + + + +H + G+L++ ++ + L++ Y G L A LR F S +
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGILTL-NLTSHLISTYISVGCLSHAVSLLRRFPPS-DAGV 92
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
W++++ Y +G + K L LF MH P +T V AC ++ ++ G H
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGA 217
SL GF ++V ++LV MY++C SL+DAR+ F+ + DVV W SII Y + G + A
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 218 LNLYGKMQIER-IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA 276
L ++ +M E P+ +T+ +VL C+SL GKQ+H + + VG+ L
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 277 MYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVT 336
MYAKCG +D+ +F M +DV+SWNAM++G SQ G A+ LF+KM E K D VT
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 337 FVNLLSACSHMGL 349
+ +S + GL
Sbjct: 333 WSAAISGYAQRGL 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD--VISWNAMI 306
+ Q K +H ++ +G L + + S L + Y G L + R P D V WN++I
Sbjct: 41 ISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 307 SGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
NG NK L LF M PD TF + AC + V G
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG 146
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 322/581 (55%), Gaps = 34/581 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ YAS +I F M E + N++ ++ L G+ +H +A+K+
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ S V VAN+L+ Y CG LD A + F K+ ++W++M+ G+ Q G +KAL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M V S T+VGV++AC+ + + GRQ+ Y + + L + ++++DMY KC
Sbjct: 221 KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 181 GSLADARRGFEYVQ-------------------------------QPDVVLWTSIITGYV 209
GS+ DA+R F+ ++ Q D+V W ++I+ Y
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 210 QNGDFEGALNLYGKMQIERIIP-NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
QNG AL ++ ++Q+++ + N++T+ S L AC+ + AL+ G+ +H+ I K+G +
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
V SAL MY+KCG L+ +F + RDV W+AMI GL+ +G GN+A+++F KM
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
KP+ VTF N+ ACSH GLVD F M + I P +HYAC+VD+L R+G L +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A +FIE+ + +W LLG C+ H N ++ A +L+EL A+VLLS+IY
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKL 508
LG+WE+V +R+ M+ G+ KEPGCS IE+ ++H F+ GD+ HP +++ +L + +
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640
Query: 509 MKDEGYQPHLDSLPESETTGDDLGDQE-GSHEIQLRVCGGV 548
+K GY+P + + + +++ +Q H +L +C G+
Sbjct: 641 LKSNGYEPEISQVLQI-IEEEEMKEQSLNLHSEKLAICYGL 680
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 206/416 (49%), Gaps = 43/416 (10%)
Query: 38 LSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYA--KCGSLDDALRTFEFSGNK 95
+S + R L +Q H ++ G S A+ L + A SL+ A + F+
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHC-SGVLPSEFTLVGVINACSDLCAIVEGRQM 154
NS W+ ++ YA D ++ F M S P+++T +I A +++ ++ G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG ++K G ++V +SL+ Y CG L A + F +++ DVV W S+I G+VQ G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
+ AL L+ KM+ E + + +TM VL AC+ + L+ G+Q+ + I + N+ + + +A+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 275 SAMYAKCGSLDDGYLIF----------W---------------------RMPTRDVISWN 303
MY KCGS++D +F W MP +D+++WN
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 304 AMISGLSQNGHGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVDRG-W--DYFKM 359
A+IS QNG N+AL +F ++ L+ K + +T V+ LSAC+ +G ++ G W Y K
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
+ T + ++ + S+ G L +++E S E + +W ++GG H
Sbjct: 394 HGIRMNFHVT----SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/520 (37%), Positives = 306/520 (58%), Gaps = 11/520 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEE-GENEFV-LTSILSDLNRTEFLDTGRQVHSLAM 58
M+SGYA+ GL EA+ +F MR E+ F + + ++L F + Q+H +
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTE---QLHCSVV 322
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKAL 117
K G L ++ AL+ Y+KC ++ DALR F E N ++W+AM++G+ Q+ E+A+
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAV 382
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
LF M GV P+EFT ++ A ++ ++H +K + V ++L+D Y
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
K G + +A + F + D+V W++++ GY Q G+ E A+ ++G++ I PNE T +
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 238 SVLKACSSL-AALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
S+L C++ A++ QGKQ H IK + + V SAL MYAK G+++ +F R
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
+D++SWN+MISG +Q+G KAL++F +M K D VTF+ + +AC+H GLV+ G Y
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
F +M + I PT EH +CMVD+ SRAG+L +A + IE+ G +WR +L CR H+
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
++G A EK++ + +S+AYVLLS++Y G W++ VR++M R V KEPG SWI
Sbjct: 679 KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
E+K+ + F+ GD HP D+I +L L+ +KD GY+P
Sbjct: 739 EVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEP 778
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 226/416 (54%), Gaps = 7/416 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGYA + E + LF +M+ E + N F + L L G QVH++ +KN
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQ-PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL + V+N+L+ LY KCG++ A F+ + K+ +TW++M++GYA +G +AL +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+SM + V SE + VI C++L + Q+H +K GF + ++L+ Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 181 GSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
++ DA R F+ + +VV WT++I+G++QN E A++L+ +M+ + + PNE T + +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L A ++ ++HA ++K + VG+AL Y K G +++ +F + +D+
Sbjct: 404 LTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
++W+AM++G +Q G A+++F ++ G KP+ TF ++L+ C+ F
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
+ + + ++ + ++ + ++ G + A+E + + + L W ++ G H
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQH 574
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 196/364 (53%), Gaps = 9/364 (2%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
GRQ+H +K G L VSV +LV Y K + D + F+ +N +TW+ +++GYA+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
+ +++ L LF M G P+ FT + ++ G Q+H +K G + V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG-DFEGALNLYGKMQIER 228
+SL+++Y KCG++ AR F+ + VV W S+I+GY NG D E AL ++ M++
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE-ALGMFYSMRLNY 290
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
+ +E + ASV+K C++L L +Q+H ++KYGF + + +AL Y+KC ++ D
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 289 LIFWRMP-TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
+F + +V+SW AMISG QN +A++LF +M +G +P+ T+ +L+A +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA---L 407
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
++ + +++ ++ + TV ++D + GK+ EA + + D + W
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSA 464
Query: 408 LLGG 411
+L G
Sbjct: 465 MLAG 468
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 149/266 (56%)
Query: 82 LDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINA 141
L +A F+ S ++ ++ +++ G+++ G +++A RLF ++H G+ V+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 142 CSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLW 201
+ LC + GRQ+H +K GF + V +SLVD Y K + D R+ F+ +++ +VV W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK 261
T++I+GY +N + L L+ +MQ E PN T A+ L + +G Q+H ++K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 262 YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALEL 321
G + +PV ++L +Y KCG++ ++F + + V++WN+MISG + NG +AL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 322 FDKMLLEGTKPDTVTFVNLLSACSHM 347
F M L + +F +++ C+++
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANL 308
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 4/230 (1%)
Query: 183 LADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKA 242
L +A F+ D + S++ G+ ++G + A L+ + + + +SVLK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 243 CSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISW 302
++L G+Q+H IK+GF +V VG++L Y K + DG +F M R+V++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 303 NAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMS 361
+ISG ++N ++ L LF +M EGT+P++ TF L + G+ RG + ++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 362 DEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+ D T V + ++++ + G + +A+ + EV + W ++ G
Sbjct: 223 NGLDKTIPVSN--SLINLYLKCGNVRKARILFDKTEV-KSVVTWNSMISG 269
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 300/509 (58%), Gaps = 4/509 (0%)
Query: 27 EGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDAL 86
E N ++ IL R + + H ++ L V++ N L+ Y+KCG ++ A
Sbjct: 57 EFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELAR 116
Query: 87 RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC 146
+ F+ ++ ++W+ M+ Y ++ +AL +F M G SEFT+ V++AC C
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
+E +++H S+K L LYV ++L+D+YAKCG + DA + FE +Q V W+S++
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
GYVQN ++E AL LY + Q + N+ T++SV+ ACS+LAAL +GKQMHA I K GF
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
V V S+ MYAKCGSL + Y+IF + +++ WN +ISG +++ + + LF+KM
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 327 LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKL 386
+G P+ VTF +LLS C H GLV+ G +FK+M + ++P V HY+CMVDIL RAG L
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 387 NEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIY 446
+EA E I+S D +W LL CR ++N ++ A EKL EL + +VLLS+IY
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIY 476
Query: 447 TALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLT 506
A QWE++ R++++ V K G SWI++K VH F VG+S HP+I EI S L L
Sbjct: 477 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 536
Query: 507 KLMKDEGYQPHLDSLPESETTGDDLGDQE 535
+ GY+P + E E ++G +E
Sbjct: 537 IKFRKFGYKPSV----EHELHDVEIGKKE 561
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/489 (37%), Positives = 289/489 (59%), Gaps = 6/489 (1%)
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
NG ++ + N L+ +Y K L+DA + F+ +N I+W+ M++ Y++ +KAL L
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M V P+ +T V+ +C+ + + R +H +K G ++V S+L+D++AK
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G DA F+ + D ++W SII G+ QN + AL L+ +M+ I + T+ SV
Sbjct: 207 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L+AC+ LA L+ G Q H I+KY +L + +AL MY KCGSL+D +F +M RDV
Sbjct: 267 LRACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
I+W+ MISGL+QNG+ +AL+LF++M GTKP+ +T V +L ACSH GL++ GW YF+
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M + I P EHY CM+D+L +AGKL++A + + E + WR LLG CR RN
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV 444
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+ YA +K++ L ++ Y LLS+IY +W+ VE +R M+ RG+ KEPGCSWIE+
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVN 504
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSHE 539
+H F++GD+ HPQI E+ +L L + GY P + + + + G+ + D H
Sbjct: 505 KQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQ-DLEGEQMEDSLRHHS 563
Query: 540 IQLRVCGGV 548
+L + G+
Sbjct: 564 EKLALAFGL 572
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 177/351 (50%), Gaps = 53/351 (15%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S Y+ + ++A+EL M + N + +S+L N + R +H +K
Sbjct: 133 MISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSSVLRSCNG---MSDVRMLHCGIIKE 188
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S V V +AL+ ++AK G +DAL F+ ++I W++++ G+AQ+ S+ AL LF
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M +G + + TL V+ AC+ L + G Q H + +K + L + ++LVDMY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC 306
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
GSL DA R F +++ DV+ W+++I+G QNG + AL L+ +M+ PN +T+ VL
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM------ 294
ACS HAG+ L+DG+ F M
Sbjct: 367 FACS-----------HAGL------------------------LEDGWYYFRSMKKLYGI 391
Query: 295 -PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
P R+ + MI L + G + A++L ++M E PD VT+ LL AC
Sbjct: 392 DPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLLGAC 437
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 169/354 (47%), Gaps = 24/354 (6%)
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
++S + + +VTL S D L EF T D +A++
Sbjct: 2 KSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEF-------------TRLCYQRDLPRAMKA 48
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
S+ G+ T +I C A+ EG + + G +++++ L++MY K
Sbjct: 49 MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVK 108
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
L DA + F+ + Q +V+ WT++I+ Y + + AL L M + + PN T +SV
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSV 168
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L++C+ ++ + + +H GIIK G +V V SAL ++AK G +D +F M T D
Sbjct: 169 LRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFK 358
I WN++I G +QN + ALELF +M G + T ++L AC+ + L++ G +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEA-KEFIESAEVDHGLCLWRILLGG 411
++ + D+ +VD+ + G L +A + F + E D + W ++ G
Sbjct: 286 IVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKERD--VITWSTMISG 333
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/531 (37%), Positives = 306/531 (57%), Gaps = 23/531 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GY+ +A+ LF ++ G +E L+ + + L G Q++ LA+K+
Sbjct: 353 MITGYSQEEHGFKALLLFHRLM-SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 411
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L V VANA + +Y KC +L +A R F+ +++++W+A++ + Q+G + L LF
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 471
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
SM S + P EFT ++ AC+ ++ G ++H +K G V SL+DMY+KC
Sbjct: 472 VSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 530
Query: 181 GSLADARR-GFEYVQQPDV-------------------VLWTSIITGYVQNGDFEGALNL 220
G + +A + + Q+ +V V W SII+GYV E A L
Sbjct: 531 GMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQML 590
Query: 221 YGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK 280
+ +M I P++ T A+VL C++LA+ GKQ+HA +IK +V + S L MY+K
Sbjct: 591 FTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSK 650
Query: 281 CGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
CG L D L+F + RD ++WNAMI G + +G G +A++LF++M+LE KP+ VTF+++
Sbjct: 651 CGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710
Query: 341 LSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH 400
L AC+HMGL+D+G +YF MM ++ + P + HY+ MVDIL ++GK+ A E I +
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 401 GLCLWRILLGGCRNHR-NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVR 459
+WR LLG C HR N ++ A L+ L +SSAY LLS++Y G WE V +R
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830
Query: 460 RMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
R M+ + KEPGCSW+ELK +HVF+VGD HP+ +EI EL L+ MK
Sbjct: 831 RNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 188/347 (54%), Gaps = 5/347 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCE--EEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
MLSGY G + ++IE+F M E E +G ++ + S L T G Q+H + +
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSL---GMQIHGIVV 207
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
+ G + V A+AL+ +YAK ++LR F+ KNS++WSA++ G Q+ AL+
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
F M S+ V+ +C+ L + G Q+H ++LK F V ++ +DMYA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KC ++ DA+ F+ + + + ++ITGY Q AL L+ ++ + +E++++
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
V +AC+ + L +G Q++ IK +L+V V +A MY KC +L + + +F M RD
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+SWNA+I+ QNG G + L LF ML +PD TF ++L AC+
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 149/276 (53%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N ++ Y+K + A F ++ ++W++M++GY Q+G+S K++ +F M G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
T ++ CS L G Q+HG +++G + S+L+DMYAK ++ R
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F+ + + + V W++II G VQN AL + +MQ ++ ASVL++C++L+ L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
G Q+HA +K F + V +A MYAKC ++ D ++F + S+NAMI+G
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
SQ HG KAL LF +++ G D ++ + AC+
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 31/239 (12%)
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
V C+ A+ G+Q H + + GF +VL+ L+ +Y A F+ + D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 198 VVLWTSII-------------------------------TGYVQNGDFEGALNLYGKMQI 226
VV W +I +GY+QNG+ ++ ++ M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
E I + T A +LK CS L G Q+H +++ G + +V SAL MYAK +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+F +P ++ +SW+A+I+G QN + AL+ F +M + ++L +C+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 49/213 (23%)
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
V K C+ AL+ GKQ HA +I GF V + L +Y ++F +MP RD
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 299 VISWNAMISGLS-------------------------------QNGHGNKALELFDKMLL 327
V+SWN MI+G S QNG K++E+F M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLN 387
EG + D TF +L CS + G I V C D+++ + L+
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLG----------MQIHGIVVRVGCDTDVVAASALLD 223
Query: 388 ---EAKEFIESAEVDHGL-----CLWRILLGGC 412
+ K F+ES V G+ W ++ GC
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 256
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/482 (37%), Positives = 287/482 (59%), Gaps = 1/482 (0%)
Query: 35 TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGN 94
++L + L GR VH+ +++ + + N L+ +YAKCGSL++A + FE
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
++ +TW+ +++GY+Q AL F+ M G P+EFTL VI A + G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG+ +K GF ++V S+L+D+Y + G + DA+ F+ ++ + V W ++I G+ +
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
E AL L+ M + P+ + AS+ ACSS L+QGK +HA +IK G L G+ L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 275 SAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
MYAK GS+ D IF R+ RDV+SWN++++ +Q+G G +A+ F++M G +P+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 335 VTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
++F+++L+ACSH GL+D GW Y+++M + I P HY +VD+L RAG LN A FIE
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 395 SAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWED 454
++ +W+ LL CR H+N ++GAYA E + EL + +V+L +IY + G+W D
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWND 482
Query: 455 VELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
VR+ MK GV KEP CSW+E+++ +H+FV D HPQ +EI + + +K+ GY
Sbjct: 483 AARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Query: 515 QP 516
P
Sbjct: 543 VP 544
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 119/234 (50%), Gaps = 4/234 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G+A ++A+ELF+ M + + F S+ + T FL+ G+ VH+ +K+
Sbjct: 233 LIAGHARRSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + N L+ +YAK GS+ DA + F+ ++ ++W++++T YAQ G ++A+ F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G+ P+E + + V+ ACS + EG + K G + + ++VD+ +
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 181 GSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
G L A R E + +P +W +++ + + E L Y + + P++
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE--LGAYAAEHVFELDPDD 463
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 299/519 (57%), Gaps = 2/519 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S YA G+ +A+ LF M ++ + + T++L L LD GRQ+H+ ++
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSS-MYTTLLKSLVNPRALDFGRQIHAHVIRA 213
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S S+ +V +Y KCG L A R F+ K + + ++ GY Q+G + AL+LF
Sbjct: 214 GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ GV F V+ AC+ L + G+Q+H KLG ++ V + LVD Y KC
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC 333
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI-IPNELTMASV 239
S A R F+ +++P+ V W++II+GY Q FE A+ + ++ + I N T S+
Sbjct: 334 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ACS LA + G Q+HA IK SAL MY+KCG LDD +F M D+
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
++W A ISG + G+ ++AL LF+KM+ G KP++VTF+ +L+ACSH GLV++G
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDT 513
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M ++++ PT++HY CM+DI +R+G L+EA +F+++ + W+ L GC H+N +
Sbjct: 514 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLE 573
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+G AGE+L +L +++ YVL ++YT G+WE+ + ++M R + KE CSWI+ K
Sbjct: 574 LGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEK 633
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHL 518
+H F+VGD HPQ EI +L+ M+ + +Q ++
Sbjct: 634 GKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNM 672
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 197/399 (49%), Gaps = 10/399 (2%)
Query: 47 LDTGRQVHSLAMKNGLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVT 105
L GR +H M+ G+ + V + N ++ +Y +C SL+DA + F+ N+++ + M++
Sbjct: 99 LSHGRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157
Query: 106 GYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL 165
YA+ G +KA+ LF M SG P ++ + + A+ GRQ+H + ++ G
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCS 217
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
+ + +V+MY KCG L A+R F+ + V T ++ GY Q G AL L+ +
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
E + + + VLKAC+SL L+ GKQ+HA + K G EV VG+ L Y KC S +
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP-DTVTFVNLLSAC 344
F + + +SW+A+ISG Q +A++ F + + ++ T+ ++ AC
Sbjct: 338 SACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
Query: 345 SHMGLVDRGWDYFKMMSDEFDITPTVEHY--ACMVDILSRAGKLNEAKEFIESAEVDHGL 402
S + + G ++ +D + Y + ++ + S+ G L++A E ES + + +
Sbjct: 398 SVLADCNIGG---QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDI 453
Query: 403 CLWRILLGGCRNHRNYDIGAYAGEKLMELG-SPESSAYV 440
W + G + N EK++ G P S ++
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 121/240 (50%), Gaps = 2/240 (0%)
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
+A M +GV S ++ + AC +L ++ GR +H +++G +L + V
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCV 124
Query: 175 -DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
MY +C SL DA + F+ + + + V T++I+ Y + G + A+ L+ M P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
++LK+ + ALD G+Q+HA +I+ G + + + MY KCG L +F +
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
M + ++ ++ G +Q G AL+LF ++ EG + D+ F +L AC+ + ++ G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 358 bits (918), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 195/520 (37%), Positives = 300/520 (57%), Gaps = 9/520 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGYA A+ LF++MR E + F L+ +++ + +D +Q+H ++
Sbjct: 111 LISGYADARETFAAMVLFKRMRKLGFEVDG-FTLSGLIAAC--CDRVDLIKQLHCFSVSG 167
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G S SV NA VT Y+K G L +A+ F ++ ++W++M+ Y Q + KAL L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
+ M G FTL V+NA + L ++ GRQ HG +K GF +V S L+D Y+K
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 180 CGS---LADARRGFEYVQQPDVVLWTSIITGYVQNGDF-EGALNLYGKMQIERIIPNELT 235
CG + D+ + F+ + PD+V+W ++I+GY N + E A+ + +MQ P++ +
Sbjct: 288 CGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCS 347
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGF-NLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
V ACS+L++ Q KQ+H IK + + V +AL ++Y K G+L D +F RM
Sbjct: 348 FVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM 407
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
P + +S+N MI G +Q+GHG +AL L+ +ML G P+ +TFV +LSAC+H G VD G
Sbjct: 408 PELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQ 467
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
+YF M + F I P EHY+CM+D+L RAGKL EA+ FI++ G W LLG CR
Sbjct: 468 EYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRK 527
Query: 415 HRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
H+N + A +LM + ++ YV+L+++Y +WE++ VR+ M+ + + K+PGCS
Sbjct: 528 HKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCS 587
Query: 475 WIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
WIE+K HVFV D HP I E+ L + K MK GY
Sbjct: 588 WIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 170/337 (50%), Gaps = 38/337 (11%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE-------FSGN----- 94
L TG+ +H+L +K+ + S ++N V LY+KCG L A F FS N
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 95 -------------------KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTL 135
++++++ +++GYA + ++ A+ LF M G FTL
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 136 VGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ 195
G+I AC D ++ +Q+H +S+ GF V ++ V Y+K G L +A F + +
Sbjct: 144 SGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 196 -PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQ 254
D V W S+I Y Q+ + AL LY +M + + T+ASVL A +SL L G+Q
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 255 MHAGIIKYGFNLEVPVGSALSAMYAKCGSLD---DGYLIFWRMPTRDVISWNAMISGLSQ 311
H +IK GF+ VGS L Y+KCG D D +F + + D++ WN MISG S
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 312 NGH-GNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
N +A++ F +M G +PD +FV + SACS++
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 308/540 (57%), Gaps = 13/540 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY G AKEA+ L +R + + S+LS + G +HS ++K+
Sbjct: 222 MISGYCQSGNAKEALTLSNGLR-----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S + V+N L+ LYA+ G L D + F+ ++ I+W++++ Y + +A+ LF
Sbjct: 277 GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ-LYVLSSLVDMYAK 179
M S + P TL+ + + S L I R + G++L+ G+ L+ + + +++V MYAK
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMAS 238
G + AR F ++ DV+ W +II+GY QNG A+ +Y M+ E I N+ T S
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL ACS AL QG ++H ++K G L+V V ++L+ MY KCG L+D +F+++P +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ WN +I+ +GHG KA+ LF +ML EG KPD +TFV LLSACSH GLVD G F+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
MM ++ ITP+++HY CMVD+ RAG+L A +FI+S + +W LL CR H N
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
D+G A E L E+ +VLLS++Y + G+WE V+ +R + +G+ K PG S +E+
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSH 538
+ V VF G+ HP +E+ EL L +K GY +P+ D+ D E H
Sbjct: 697 DNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGY------VPDHRFVLQDVEDDEKEH 750
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 169/303 (55%), Gaps = 8/303 (2%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L + + +H+ + + + V ++ LV LY G++ A TF+ N++ W+ M++G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 107 YAQSGDSEKALRLFH-SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL 165
Y ++G+S + +R F M SG+ P T V+ AC +++G ++H +LK GF
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMW 183
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
+YV +SL+ +Y++ ++ +AR F+ + D+ W ++I+GY Q+G+ + AL L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
+ +T+ S+L AC+ ++G +H+ IK+G E+ V + L +YA+ G L
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
D +F RM RD+ISWN++I N +A+ LF +M L +PD +T ++L S S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 346 HMG 348
+G
Sbjct: 360 QLG 362
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 108/186 (58%), Gaps = 8/186 (4%)
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
+ + LV++Y G++A AR F+++Q DV W +I+GY + G+ + + +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 229 -IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
+ P+ T SVLKAC ++ G ++H +K+GF +V V ++L +Y++ ++ +
Sbjct: 148 GLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 288 YLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
++F MP RD+ SWNAMISG Q+G+ +AL L + + D+VT V+LLSAC+
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEA 260
Query: 348 GLVDRG 353
G +RG
Sbjct: 261 GDFNRG 266
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 293/516 (56%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY + G E ++LF+ M E NEFV T + + + ++ G+Q H +K
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL+S V N LV +Y+ C +A+R + + +S+ ++GY + G ++ L +
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ + T + + S+L + Q+H ++ GF ++ +L++MY KC
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKC 285
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + A+R F+ ++ L T+I+ Y Q+ FE ALNL+ KM + + PNE T A +L
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
+ + L+ L QG +H ++K G+ V VG+AL MYAK GS++D F M RD++
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+WN MISG S +G G +ALE FD+M+ G P+ +TF+ +L ACSH+G V++G YF +
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQL 465
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+FD+ P ++HY C+V +LS+AG +A++F+ +A ++ + WR LL C RNY +
Sbjct: 466 MKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRL 525
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G E +E +S YVLLS+I+ +WE V VR +M RGV KEPG SWI +++
Sbjct: 526 GKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRN 585
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
HVF+ D+ HP+I I ++++ + +K GY P
Sbjct: 586 QTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSP 621
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 34 LTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA---NALVTLYAKCGSLDDALRTFE 90
L +L + +L G +H+ + S A N+L+ LY KC A + F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 91 FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG-VLPSEFTLVGVINACSDLCAIV 149
+N ++W AM+ GY SG + L+LF SM SG P+EF V +CS+ I
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
EG+Q HG LK G +V ++LV MY+ C +A R + + D+ +++S ++GY+
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP 269
+ G F+ L++ K E + N LT S L+ S+L L+ Q+H+ ++++GFN EV
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
AL MY KCG + +F +++ ++ Q+ +AL LF KM +
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
P+ TF LL++ + + L+ +G D + + V +V++ +++G + +A
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 390 KEFIESAEVDHGLCLWRILLGGCRNH 415
++ S + W ++ GC +H
Sbjct: 393 RKAF-SGMTFRDIVTWNTMISGCSHH 417
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 302/523 (57%), Gaps = 4/523 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY GL E+I LF +MR + ++F + +L + G+Q+H+L++
Sbjct: 221 LITGYEKDGLYTESIHLFLKMR-QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G SV N ++ Y+K + + F+ + ++++ +++ Y+Q+ E +L F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M C G F +++ ++L ++ GRQ+H +L L+V +SLVDMYAKC
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+A F+ + Q V WT++I+GYVQ G L L+ KM+ + ++ T A+VL
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLE-VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
KA +S A+L GKQ+HA II+ G NLE V GS L MYAKCGS+ D +F MP R+
Sbjct: 460 KASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 518
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SWNA+IS + NG G A+ F KM+ G +PD+V+ + +L+ACSH G V++G +YF+
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA 578
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
MS + ITP +HYACM+D+L R G+ EA++ ++ + +W +L CR H+N
Sbjct: 579 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS 638
Query: 420 IGAYAGEKLMELGS-PESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+ A EKL + +++AYV +S+IY A G+WE V V++ M+ RG+ K P SW+E+
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSL 521
+HVF D HP DEI ++ LT ++ EGY+P S+
Sbjct: 699 NHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSV 741
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 217/448 (48%), Gaps = 13/448 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQM-RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
++ YA EA +LF QM R + T++L N + QVH+ A+K
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 60 NGLLS--IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
G + ++V+N L+ Y + LD A FE K+S+T++ ++TGY + G +++
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
LF M SG PS+FT GV+ A L G+Q+H S+ GF V + ++D Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
+K + + R F+ + + D V + +I+ Y Q +E +L+ + +MQ A
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
++L ++L++L G+Q+H + + + VG++L MYAKC ++ LIF +P R
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG--LVDRGWD 355
+SW A+ISG Q G L+LF KM + D TF +L A + L+ +
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
F + S + V + +VD+ ++ G + +A + E D W L+ ++
Sbjct: 476 AFIIRSGNLE---NVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADN 531
Query: 416 RNYD--IGAYAGEKLMELGSPESSAYVL 441
+ + IGA+A K++E G S +L
Sbjct: 532 GDGEAAIGAFA--KMIESGLQPDSVSIL 557
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 158/322 (49%), Gaps = 10/322 (3%)
Query: 37 ILSDLNRTEFLDTGRQVHS-LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK 95
I+ DL R + R+V+ + KN + + N +++ + K G + A F+ ++
Sbjct: 54 IVEDLLRRGQVSAARKVYDEMPHKNTVST-----NTMISGHVKTGDVSSARDLFDAMPDR 108
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSM--HCSGVLPSEFTLVGVINACSDLCAIVEGRQ 153
+TW+ ++ YA++ ++A +LF M S LP T ++ C+D Q
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 154 MHGYSLKLGFGLQLYVLSS--LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQN 211
+H +++KLGF ++ S L+ Y + L A FE + + D V + ++ITGY ++
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
G + +++L+ KM+ P++ T + VLKA L G+Q+HA + GF+ + VG
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVG 288
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTK 331
+ + Y+K + + ++F MP D +S+N +IS SQ +L F +M G
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 332 PDTVTFVNLLSACSHMGLVDRG 353
F +LS +++ + G
Sbjct: 349 RRNFPFATMLSIAANLSSLQMG 370
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 297/546 (54%), Gaps = 37/546 (6%)
Query: 5 YASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLS 64
+ L +A+ F +MR ++ V S+L L G VH ++ G+
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHN-VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 65 IVSVANALVTLYAKC---GS---------------------------------LDDALRT 88
+ NAL+ +YAK GS +D R
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
FE K+ ++++ ++ GYAQSG E ALR+ M + + P FTL V+ S+ +
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
++G+++HGY ++ G +Y+ SSLVDMYAK + D+ R F + D + W S++ GY
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
VQNG + AL L+ +M ++ P + +SV+ AC+ LA L GKQ+H +++ GF +
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
+ SAL MY+KCG++ IF RM D +SW A+I G + +GHG++A+ LF++M +
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G KP+ V FV +L+ACSH+GLVD W YF M+ + + +EHYA + D+L RAGKL E
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A FI V+ +W LL C H+N ++ EK+ + S AYVL+ ++Y +
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKL 508
G+W+++ +R M+ +G+ K+P CSWIE+K+ H FV GD HP +D+I L+ + +
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618
Query: 509 MKDEGY 514
M+ EGY
Sbjct: 619 MEKEGY 624
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 193/331 (58%), Gaps = 15/331 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDT--GRQVHSLAM 58
+++GYA G+ ++A+ + +M + + ++ F L+S+L +E++D G+++H +
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDS-FTLSSVLPIF--SEYVDVIKGKEIHGYVI 269
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
+ G+ S V + ++LV +YAK ++D+ R F ++ I+W+++V GY Q+G +ALR
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M + V P VI AC+ L + G+Q+HGY L+ GFG +++ S+LVDMY+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG++ AR+ F+ + D V WT+II G+ +G A++L+ +M+ + + PN++ +
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 239 VLKACSSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM--- 294
VL ACS + +D+ + K YG N E+ +A++ + + G L++ Y +M
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKM 325
PT V W+ ++S S +K LEL +K+
Sbjct: 510 PTGSV--WSTLLSSCSV----HKNLELAEKV 534
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 203/415 (48%), Gaps = 40/415 (9%)
Query: 33 VLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFS 92
++ +++ + R + +Q+H+ ++ LS S A+ ++++Y L +AL F+
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTL 65
Query: 93 GNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR 152
+ + W +++ + KAL F M SG P V+ +C+ + + G
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAK---------CGSLAD------------------ 185
+HG+ ++LG LY ++L++MYAK G++ D
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 186 ---------ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
RR FE + + DVV + +II GY Q+G +E AL + +M + P+ T+
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
+SVL S + +GK++H +I+ G + +V +GS+L MYAK ++D +F R+
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD- 355
RD ISWN++++G QNG N+AL LF +M+ KP V F +++ AC+H+ + G
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+ ++ F + + +VD+ S+ G + A++ + V + I++G
Sbjct: 366 HGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 291/501 (58%), Gaps = 5/501 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+LSGY L KEA+ELF M + + + +SIL+ L G QVH+ +K
Sbjct: 321 LLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA 379
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDS---EKAL 117
L + V N+L+ +YAKC L DA + F+ + + ++AM+ GY++ G +AL
Sbjct: 380 NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 439
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
+F M + PS T V ++ A + L ++ +Q+HG K G L ++ S+L+D+Y
Sbjct: 440 NIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
+ C L D+R F+ ++ D+V+W S+ GYVQ + E ALNL+ ++Q+ R P+E T A
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
+++ A +LA++ G++ H ++K G + +AL MYAKCGS +D + F +R
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR 619
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
DV+ WN++IS + +G G KAL++ +KM+ EG +P+ +TFV +LSACSH GLV+ G F
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
++M F I P EHY CMV +L RAG+LN+A+E IE +WR LL GC N
Sbjct: 680 ELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
++ +A E + +S ++ +LS+IY + G W + + VR MK GV KEPG SWI
Sbjct: 739 VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798
Query: 478 LKSLVHVFVVGDSMHPQIDEI 498
+ VH+F+ D H + ++I
Sbjct: 799 INKEVHIFLSKDKSHCKANQI 819
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 215/418 (51%), Gaps = 11/418 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGR----QVHSL 56
M+S G+ +E++ +F + ++ NE++L+S + + + GR Q+ S
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSF 173
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
+K+G V V L+ Y K G++D A F+ K+++TW+ M++G + G S +
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L+LF+ + V+P + L V++ACS L + G+Q+H + L+ G + +++ L+D
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
Y KCG + A + F + +++ WT++++GY QN + A+ L+ M + P+
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
+S+L +C+SL AL G Q+HA IK + V ++L MYAKC L D +F
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 297 RDVISWNAMISGLSQNGHG---NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
DV+ +NAMI G S+ G ++AL +F M +P +TFV+LL A + + +
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 354 WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+M ++ + + + ++D+ S L +++ + +V L +W + G
Sbjct: 474 KQIHGLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 164/302 (54%), Gaps = 11/302 (3%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD 112
VH + GL ++N L+ LY++ G + A + FE +N ++WS MV+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 113 SEKALRLFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEGR------QMHGYSLKLGFGL 165
E++L +F P+E+ L I ACS L +GR Q+ + +K GF
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVKSGFDR 181
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
+YV + L+D Y K G++ AR F+ + + V WT++I+G V+ G +L L+ ++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
+ ++P+ +++VL ACS L L+ GKQ+HA I++YG ++ + + L Y KCG +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+ +F MP +++ISW ++SG QN +A+ELF M G KPD ++L++C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 346 HM 347
+
Sbjct: 362 SL 363
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 117/205 (57%), Gaps = 7/205 (3%)
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
+HG + G L Y+ + L+++Y++ G + AR+ FE + + ++V W+++++ +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 214 FEGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGK----QMHAGIIKYGFNLEV 268
+E +L ++ + + + PNE ++S ++ACS L +G+ Q+ + ++K GF+ +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDV 183
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
VG+ L Y K G++D L+F +P + ++W MISG + G +L+LF +++ +
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRG 353
PD +LSACS + ++ G
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGG 268
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
N DF + + G+ + R++ L+A L L +H II +G L+ +
Sbjct: 32 NADFPSTIGIRGRREFARLLQ--------LRASDDL--LHYQNVVHGQIIVWGLELDTYL 81
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML-LEG 329
+ L +Y++ G + +F +MP R+++SW+ M+S + +G ++L +F +
Sbjct: 82 SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRK 141
Query: 330 TKPDTVTFVNLLSACSHMGLVDRG-WDYFKMMS----DEFDITPTVEHYACMVDILSRAG 384
P+ + + ACS GL RG W F++ S FD V ++D + G
Sbjct: 142 DSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVG--TLLIDFYLKDG 197
Query: 385 KLNEAKEFIESAEVDHGLCLWRILLGGC 412
++ A+ + A + W ++ GC
Sbjct: 198 NIDYAR-LVFDALPEKSTVTWTTMISGC 224
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 301/531 (56%), Gaps = 5/531 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GYAS A E F +M ++ NEF L+S+L + L G VH + +K
Sbjct: 82 MITGYASSNYNARAWECFHEM-VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL 140
Query: 61 GLLSIVSVANALVTLYAKCG-SLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G+ + V NA++ +YA C +++ A F KN +TW+ ++TG+ GD L++
Sbjct: 141 GMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKM 200
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
+ M + + + + A + + ++ G+Q+H +K GF L V++S++D+Y +
Sbjct: 201 YKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCR 260
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG L++A+ F ++ D++ W ++I+ ++ D AL ++ + + + +PN T S+
Sbjct: 261 CGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM-PTRD 298
+ AC+++AAL+ G+Q+H I + GFN V + +AL MYAKCG++ D +F + R+
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
++SW +M+ G +G+G +A+ELFDKM+ G +PD + F+ +LSAC H GLV++G YF
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR-N 417
+M E+ I P + Y C+VD+L RAGK+ EA E +E W +LG C+ H+ N
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
I A K+MEL YV+LS IY A G+W D VR+MM+ G KE G SWI
Sbjct: 500 GLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWIL 559
Query: 478 LKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTG 528
+++ V F V D M P + S L LL + ++ GY P LDSL + G
Sbjct: 560 VENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQEVG 610
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 195/352 (55%), Gaps = 9/352 (2%)
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
+A L+ Y + G +++A F+ +++ + W+AM+TGYA S + +A FH M G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG-SLADA 186
P+EFTL V+ +C ++ + G +HG +KLG LYV +++++MYA C ++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 187 RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER--IIPNELTMASVLKACS 244
F ++ + V WT++ITG+ GD G L +Y +M +E + P +T+A ++A +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASA 224
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
S+ ++ GKQ+HA +IK GF +PV +++ +Y +CG L + F M +D+I+WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDE 363
+IS L + ++AL +F + +G P+ TF +L++AC+++ ++ G + ++
Sbjct: 285 LISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 364 FDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
F+ VE ++D+ ++ G + +++ L W ++ G +H
Sbjct: 344 FN--KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 348 bits (893), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 302/545 (55%), Gaps = 29/545 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEE--------------EEGENEFVL------------ 34
+LS YA G +AI+LF++M + E E+ FVL
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDH 155
Query: 35 ---TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEF 91
T +LS + EF + +H+LA+ +G +SV N L+T Y KCG F+
Sbjct: 156 ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDG 215
Query: 92 SGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEG 151
++N IT +A+++G ++ E LRLF M V P+ T + + ACS IVEG
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQN 211
+Q+H K G +L + S+L+DMY+KCGS+ DA FE + D V T I+ G QN
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQN 335
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
G E A+ + +M + + +++VL +L GKQ+H+ +IK F+ V
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTK 331
+ L MY+KCG L D +F RMP R+ +SWN+MI+ +++GHG AL+L+++M K
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 332 PDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE 391
P VTF++LL ACSH+GL+D+G + M + I P EHY C++D+L RAG L EAK
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 392 FIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQ 451
FI+S + +W+ LLG C H + ++G YA E+L + SSA++L+++IY++ G+
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGK 575
Query: 452 WEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKD 511
W++ + MKA GV KE G S IE++ H FVV D +HPQ + I L L +M D
Sbjct: 576 WKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVD 635
Query: 512 EGYQP 516
EGY+P
Sbjct: 636 EGYRP 640
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 155/286 (54%), Gaps = 9/286 (3%)
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
V N+L++LYAKCG L DA++ F+ ++ I+ + + G+ ++ ++E L M SG
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 128 VLPSEFTLVGVINAC--SDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
TL V++ C + C + + +H ++ G+ ++ V + L+ Y KCG
Sbjct: 152 GF-DHATLTIVLSVCDTPEFCLVT--KMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS 245
R F+ + +V+ T++I+G ++N E L L+ M+ + PN +T S L ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
+ +G+Q+HA + KYG E+ + SAL MY+KCGS++D + IF D +S +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
+ GL+QNG +A++ F +ML G + D N++SA + +D
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDA----NVVSAVLGVSFID 370
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
L V +SL+ +YAKCG L DA + F+ + DV+ + G+++N + E L +M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
+ T+ VL C + K +HA I G++ E+ VG+ L Y KCG
Sbjct: 150 SGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
G +F M R+VI+ A+ISGL +N L LF M P++VT+++ L+ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES-AEVDHGLCLW 405
+ G ++ ++ I + + ++D+ S+ G + +A ES EVD + +
Sbjct: 269 SQRIVEGQQIHALLW-KYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE-VSMT 326
Query: 406 RILLGGCRN 414
IL+G +N
Sbjct: 327 VILVGLAQN 335
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 225 QIERIIPNELTMASVLKACSSLAALDQ-GKQMHAGIIKYGFNLE----------VPVGSA 273
Q+ + N + M+ +L C G +HA IIK E + V ++
Sbjct: 36 QVSTFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNS 95
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L ++YAKCG L D +F MP RDVIS N + G +N L +ML G D
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-D 154
Query: 334 TVTFVNLLSAC 344
T +LS C
Sbjct: 155 HATLTIVLSVC 165
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 308/538 (57%), Gaps = 10/538 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ ++A+ ++ M+ ++ F +L + L GR VH+ +
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDS-FTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE--FSGNKNSITWSAMVTGYAQSGDSEKALR 118
G + V V N L+ LYAKC L A FE + ++W+A+V+ YAQ+G+ +AL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
+F M V P LV V+NA + L + +GR +H +K+G ++ +L SL MYA
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG +A A+ F+ ++ P+++LW ++I+GY +NG A++++ +M + + P+ +++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+ AC+ + +L+Q + M+ + + + +V + SAL M+AKCGS++ L+F R RD
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
V+ W+AMI G +G +A+ L+ M G P+ VTF+ LL AC+H G+V GW +F
Sbjct: 389 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN 448
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M+D I P +HYAC++D+L RAG L++A E I+ V G+ +W LL C+ HR+
Sbjct: 449 RMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 507
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
++G YA ++L + + YV LS++Y A W+ V VR MK +G+ K+ GCSW+E+
Sbjct: 508 ELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEG 536
+ + F VGD HP+ +EI ++ + +K+ G+ + D+ + DL D+E
Sbjct: 568 RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA------SLHDLNDEEA 619
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 201/363 (55%), Gaps = 4/363 (1%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+Q+H+ + GL + L+ + G + A + F+ W+A++ GY+++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
+ AL ++ +M + V P FT ++ ACS L + GR +H +LGF ++V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPD--VVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
+ L+ +YAKC L AR FE + P+ +V WT+I++ Y QNG+ AL ++ +M+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
+ P+ + + SVL A + L L QG+ +HA ++K G +E + +L+ MYAKCG +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
++F +M + ++I WNAMISG ++NG+ +A+++F +M+ + +PDT++ + +SAC+ +G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRIL 408
+++ ++ + D V + ++D+ ++ G + E + +D + +W +
Sbjct: 338 SLEQARSMYEYVGRS-DYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAM 395
Query: 409 LGG 411
+ G
Sbjct: 396 IVG 398
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 251 QGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLS 310
Q KQ+HA ++ G + + L + G + +F +P + WNA+I G S
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+N H AL ++ M L PD+ TF +LL ACS + + G
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 293/557 (52%), Gaps = 70/557 (12%)
Query: 33 VLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFS 92
VL ++ G+Q+H ++ +GL V ++ +Y +CG + DA + F+
Sbjct: 118 VLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRM 177
Query: 93 GNK-----------------------------------NSITWSAMVTGYAQSGDSEKAL 117
+K N ++W+ +++G+ +SG ++A+
Sbjct: 178 SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
+F +H G P + T+ V+ + D + GR +HGY +K G V+S+++DMY
Sbjct: 238 VMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 178 AKCGSLAD-----------------------ARRGF------------EYVQQPDVVLWT 202
K G + +R G E + +VV WT
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 203 SIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY 262
SII G QNG AL L+ +MQ+ + PN +T+ S+L AC ++AAL G+ H ++
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 263 GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELF 322
V VGSAL MYAKCG ++ ++F MPT++++ WN++++G S +G + + +F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
+ ++ KPD ++F +LLSAC +GL D GW YFKMMS+E+ I P +EHY+CMV++L R
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 383 AGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLL 442
AGKL EA + I+ + C+W LL CR N D+ A EKL L YVLL
Sbjct: 538 AGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLL 597
Query: 443 SSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSEL 502
S+IY A G W +V+ +R M++ G+ K PGCSWI++K+ V+ + GD HPQID+I ++
Sbjct: 598 SNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKM 657
Query: 503 RLLTKLMKDEGYQPHLD 519
++K M+ G++P+LD
Sbjct: 658 DEISKEMRKSGHRPNLD 674
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 184/389 (47%), Gaps = 47/389 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMR----CEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSL 56
+LSG+ G KEA+ +F+++ C ++ ++S+L + +E L+ GR +H
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ-----VTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 57 AMKNGLLSIVSVANALVTLYAKCGS-------------------------------LDDA 85
+K GLL V +A++ +Y K G +D A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 86 LRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINA 141
L FE + N ++W++++ G AQ+G +AL LF M +GV P+ T+ ++ A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 142 CSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLW 201
C ++ A+ GR HG+++++ ++V S+L+DMYAKCG + ++ F + ++V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG-KQMHAGII 260
S++ G+ +G + ++++ + R+ P+ ++ S+L AC + D+G K
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 261 KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKAL 319
+YG + S + + + G L + Y + MP D W A+++ + + A
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 320 ELFDKML-LEGTKPDTVTFVNLLSACSHM 347
+K+ LE P T ++ + A M
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 198/470 (42%), Gaps = 74/470 (15%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
Q H+ +K+G + ++ L+ Y+ +DA + + ++S+++ ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
+++ +F M G++P L + C++L A G+Q+H S G + +V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 172 SLVDMYAKCGSLADARRGFEYVQQPDVVL------------------------------- 200
S+ MY +CG + DAR+ F+ + DVV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 201 ----WTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
W I++G+ ++G + A+ ++ K+ P+++T++SVL + L+ G+ +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGS-------------------------------LD 285
+IK G + V SA+ MY K G +D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 286 DGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLL 341
+F + +V+SW ++I+G +QNG +ALELF +M + G KP+ VT ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 342 SACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG 401
AC ++ + G + + V + ++D+ ++ G++N ++ +
Sbjct: 396 PACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 402 LCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQ 451
+C W L+ G H E LM + ++ +S+ +A GQ
Sbjct: 455 VC-WNSLMNGFSMHGKAKEVMSIFESLMR--TRLKPDFISFTSLLSACGQ 501
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 174/516 (33%), Positives = 289/516 (56%), Gaps = 2/516 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY L + +E++ +F + ++ + ++S+L L + +++ +K
Sbjct: 279 MICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA 336
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + +V N L+ +YAKCG + A F K++++W+++++GY QSGD +A++LF
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M T + +I+ + L + G+ +H +K G + L V ++L+DMYAKC
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + D+ + F + D V W ++I+ V+ GDF L + +M+ ++P+ T L
Sbjct: 457 GEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
C+SLAA GK++H ++++G+ E+ +G+AL MY+KCG L++ +F RM RDV+
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+W MI G G KALE F M G PD+V F+ ++ ACSH GLVD G F+ M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+ I P +EHYAC+VD+LSR+ K+++A+EFI++ + +W +L CR + +
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
+++EL + +L S+ Y AL +W+ V L+R+ +K + + K PG SWIE+
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGK 756
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
VHVF GD PQ + I L +L LM EGY P
Sbjct: 757 NVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIP 792
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 196/348 (56%), Gaps = 2/348 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ ++ GL EA+E + ++R E + +++ S++ + G V+ +
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S + V NALV +Y++ G L A + F+ ++ ++W+++++GY+ G E+AL ++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
H + S ++P FT+ V+ A +L + +G+ +HG++LK G + V + LV MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
DARR F+ + D V + ++I GY++ E ++ ++ + +++ P+ LT++SVL
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVL 314
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
+AC L L K ++ ++K GF LE V + L +YAKCG + +F M +D +
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
SWN++ISG Q+G +A++LF M++ + D +T++ L+S + +
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 6/373 (1%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNKNSIT 99
L+ + L+ R++H+L + GL S + L+ Y+ +L F S KN
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 100 WSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL 159
W++++ ++++G +AL + + S V P ++T VI AC+ L G ++ L
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 160 KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALN 219
+GF L+V ++LVDMY++ G L AR+ F+ + D+V W S+I+GY +G +E AL
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 220 LYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
+Y +++ I+P+ T++SVL A +L + QG+ +H +K G N V V + L AMY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
K D +F M RD +S+N MI G + +++ +F + L+ KPD +T +
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFKPDLLTVSS 312
Query: 340 LLSACSHM-GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV 398
+L AC H+ L + Y M+ F + TV + ++D+ ++ G + A++ S E
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMEC 370
Query: 399 DHGLCLWRILLGG 411
+ W ++ G
Sbjct: 371 KDTVS-WNSIISG 382
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 276/474 (58%), Gaps = 2/474 (0%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L G++VH+ +K L + L+ Y KC L+DA + + KN ++W+AM++
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 107 YAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
Y+Q+G S +AL +F M S P+EFT V+ +C + G+Q+HG +K +
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
++V SSL+DMYAK G + +AR FE + + DVV T+II GY Q G E AL ++ ++
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
E + PN +T AS+L A S LA LD GKQ H +++ + ++L MY+KCG+L
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACS 345
+F MP R ISWNAM+ G S++G G + LELF M E KPD VT + +LS CS
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 346 HMGLVDRGWDYFK-MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCL 404
H + D G + F M++ E+ P EHY C+VD+L RAG+++EA EFI+ +
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 405 WRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKA 464
LLG CR H + DIG G +L+E+ + YV+LS++Y + G+W DV VR MM
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Query: 465 RGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHL 518
+ V KEPG SWI+ + +H F D HP+ +E+ ++++ ++ MK GY P L
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 157/280 (56%), Gaps = 4/280 (1%)
Query: 137 GVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP 196
++NAC D A+ +G+++H + +K + Y+ + L+ Y KC L DAR+ + + +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
+VV WT++I+ Y Q G AL ++ +M PNE T A+VL +C + L GKQ+H
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGN 316
I+K+ ++ + VGS+L MYAK G + + IF +P RDV+S A+I+G +Q G
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 317 KALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDEFDITPTVEHYAC 375
+ALE+F ++ EG P+ VT+ +LL+A S + L+D G + ++ E +++
Sbjct: 237 EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--S 294
Query: 376 MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
++D+ S+ G L+ A+ ++ + W +L G H
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAIS-WNAMLVGYSKH 333
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 161/300 (53%), Gaps = 4/300 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S Y+ G + EA+ +F +M + NEF ++L+ R L G+Q+H L +K
Sbjct: 124 MISRYSQTGHSSEALTVFAEM-MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S + V ++L+ +YAK G + +A FE ++ ++ +A++ GYAQ G E+AL +F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
H +H G+ P+ T ++ A S L + G+Q H + L+ + +SL+DMY+KC
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASV 239
G+L+ ARR F+ + + + W +++ GY ++G L L+ M+ E R+ P+ +T+ +V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 240 LKACSSLAALDQGKQMHAGII--KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
L CS D G + G++ +YG + M + G +D+ + RMP++
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 313/586 (53%), Gaps = 74/586 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQ---VHSLA 57
M++G++ AI LF +M+ E + +N F S+L+ L D +Q H+ A
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDN-FTFASVLAGLALVA--DDEKQCVQFHAAA 175
Query: 58 MKNGLLSIVSVANALVTLYAKCGS----LDDALRTFEFSGNKNSITWSAMVTGYAQSG-- 111
+K+G I SV+NALV++Y+KC S L A + F+ K+ +W+ M+TGY ++G
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 112 -----------DSEK-------------------ALRLFHSMHCSGVLPSEFTLVGVINA 141
D+ K AL + M SG+ EFT VI A
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 142 CSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLW 201
C+ + G+Q+H Y L+ + +SLV +Y KCG +AR FE + D+V W
Sbjct: 296 CATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 202 TSIITGYV-------------------------------QNGDFEGALNLYGKMQIERII 230
++++GYV +NG E L L+ M+ E
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
P + + +K+C+ L A G+Q HA ++K GF+ + G+AL MYAKCG +++ +
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F MP D +SWNA+I+ L Q+GHG +A++++++ML +G +PD +T + +L+ACSH GLV
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 351 DRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
D+G YF M + I P +HYA ++D+L R+GK ++A+ IES +W LL
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 411 GCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
GCR H N ++G A +KL L Y+LLS+++ A GQWE+V VR++M+ RGV KE
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKE 654
Query: 471 PGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
CSWIE+++ VH F+V D+ HP+ + + L+ L K M+ GY P
Sbjct: 655 VACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP 700
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 201/461 (43%), Gaps = 114/461 (24%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE---------- 90
L RT L R VH + G + N L+ +Y K L+ A + F+
Sbjct: 25 LRRTS-LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIAR 83
Query: 91 --------FSGN---------------KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
SG+ ++++ ++AM+TG++ + D A+ LF M G
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 128 VLPSEFTLVGVINACSDLCAIVEGR--QMHGYSLKLGFGLQLYVLSSLVDMYAKCGS--- 182
P FT V+ + L A E + Q H +LK G G V ++LV +Y+KC S
Sbjct: 144 FKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 183 -LADARRGFEYVQQPDVVLWTSIITGYVQNGDF--------------------------- 214
L AR+ F+ + + D WT+++TGYV+NG F
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 215 -----EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK---YGFNL 266
+ AL + +M I +E T SV++AC++ L GKQ+HA +++ + F+
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA---------------------- 304
+ ++L ++Y KCG D+ IF +MP +D++SWNA
Sbjct: 323 D----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 305 ---------MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
MISGL++NG G + L+LF M EG +P F + +C+ +G G
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 356 YF-KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
Y +++ FD + + + ++ + ++ G + EA++ +
Sbjct: 439 YHAQLLKIGFDSSLSAGN--ALITMYAKCGVVEEARQVFRT 477
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 67/288 (23%)
Query: 228 RIIPNELTMASVLKACSSL--AALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
R I N A+ L+ C L +L + +H II +GF + + L +Y K L+
Sbjct: 9 RAIANRY--AANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELN 66
Query: 286 ---------------------DGYL----------IFWRMPT--RDVISWNAMISGLSQN 312
GY +F + P RD + +NAMI+G S N
Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHN 126
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACS------------HMGLVDRGWDYFKMM 360
G A+ LF KM EG KPD TF ++L+ + H + G Y +
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV 186
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
S+ + A +L A K+ + E +E E W ++ G + +D+
Sbjct: 187 SNA--LVSVYSKCASSPSLLHSARKVFD--EILEKDERS-----WTTMMTGYVKNGYFDL 237
Query: 421 GAYAGEKLMELGSPES---SAYVLLSSIYTALGQWED-VELVRRMMKA 464
GE+L+E G ++ AY + S Y G +++ +E+VRRM+ +
Sbjct: 238 ----GEELLE-GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS 280
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 305/545 (55%), Gaps = 39/545 (7%)
Query: 2 LSGYASLGLAKEAIELFEQMR----CEEEEGENEF-VLTSILSDLNRTEFLDTGRQVHSL 56
+ G++ KE+ L++QM CE + VL + +DL + G +
Sbjct: 125 IRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL---GHMILGH 181
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
+K L + V NA + ++A CG +++A + F+ S ++ ++W+ ++ GY + G++EKA
Sbjct: 182 VLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKA 241
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+ ++ M GV P + T++G++++CS L + G++ + Y + G + + ++++L+DM
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG----------DFE----------- 215
++KCG + +ARR F+ +++ +V WT++I+GY + G D E
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 216 ----------GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN 265
AL L+ +MQ P+E+TM L ACS L ALD G +H I KY +
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS 421
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
L V +G++L MYAKCG++ + +F + TR+ +++ A+I GL+ +G + A+ F++M
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM 481
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
+ G PD +TF+ LLSAC H G++ G DYF M F++ P ++HY+ MVD+L RAG
Sbjct: 482 IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 386 LNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSI 445
L EA +ES ++ +W LL GCR H N ++G A +KL+EL +S YVLL +
Sbjct: 542 LEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 446 YTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLL 505
Y WED + RRMM RGV K PGCS IE+ +V F+V D P+ ++I L L
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCL 661
Query: 506 TKLMK 510
+ M+
Sbjct: 662 GRHMR 666
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 223/454 (49%), Gaps = 41/454 (9%)
Query: 30 NEFVL-TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGS--LDDAL 86
+ FVL +LS L + + L +Q+ + + NGL+ ++ L+ A S LD ++
Sbjct: 48 HSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSV 107
Query: 87 RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM---HCSGVLPSEFTLVGVINACS 143
+ + N N +W+ + G+++S + +++ L+ M C P FT + C+
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTS 203
DL G + G+ LKL L +V ++ + M+A CG + +AR+ F+ D+V W
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 204 IITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
+I GY + G+ E A+ +Y M+ E + P+++TM ++ +CS L L++GK+ + + + G
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNG---------- 313
+ +P+ +AL M++KCG + + IF + R ++SW MISG ++ G
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 314 ---------------------HGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
G AL LF +M TKPD +T ++ LSACS +G +D
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC 412
G + +++ ++ V +VD+ ++ G ++EA + + L + ++GG
Sbjct: 408 GI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT-YTAIIGGL 465
Query: 413 RNHRNYDIGAYAGEKLMELG-SPESSAYV-LLSS 444
H + ++++ G +P+ ++ LLS+
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 183/379 (48%), Gaps = 47/379 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVL-----TSILSDLNRTEFLDTGRQVHS 55
+++GY +G A++AI +++ M E + ++ ++ S+L DLNR G++ +
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNR------GKEFYE 281
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG---- 111
+NGL + + NAL+ +++KCG + +A R F+ + ++W+ M++GYA+ G
Sbjct: 282 YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDV 341
Query: 112 ---------------------------DSEKALRLFHSMHCSGVLPSEFTLVGVINACSD 144
+ AL LF M S P E T++ ++ACS
Sbjct: 342 SRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 145 LCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSI 204
L A+ G +H Y K L + + +SLVDMYAKCG++++A F +Q + + +T+I
Sbjct: 402 LGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 205 ITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII-KYG 263
I G +GD A++ + +M I P+E+T +L AC + G+ + + ++
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKAL-EL 321
N ++ S + + + G L++ + MP D W A++ G HGN L E
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM--HGNVELGEK 579
Query: 322 FDKMLLEGTKPDTVTFVNL 340
K LLE D+ +V L
Sbjct: 580 AAKKLLELDPSDSGIYVLL 598
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/535 (35%), Positives = 286/535 (53%), Gaps = 9/535 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY + E+I++F + E + L IL + + L G Q+HSLA K
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S V ++LY+KCG + F + + ++AM+ GY +G++E +L LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ SG TLV ++ L I +HGY LK F V ++L +Y+K
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ AR+ F+ + + W ++I+GY QNG E A++L+ +MQ PN +T+ +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC+ L AL GK +H + F + V +AL MYAKCGS+ + +F M ++ +
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+WN MISG +G G +AL +F +ML G P VTF+ +L ACSH GLV G + F M
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+ P+V+HYACMVDIL RAG L A +FIE+ ++ G +W LLG CR H++ ++
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
EKL EL +VLLS+I++A + VR+ K R +AK PG + IE+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQE 535
HVF GD HPQ+ EI +L L M++ GYQ PE+E D+ ++E
Sbjct: 668 TPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQ------PETELALHDVEEEE 716
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 182/349 (52%), Gaps = 11/349 (3%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
GR +H A+ +G S + + + +V +Y K ++DA + F+ K++I W+ M++GY +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 110 SGDSEKALRLFHSM---HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
+ +++++F + C+ + + TL+ ++ A ++L + G Q+H + K G
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTT--TLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
YVL+ + +Y+KCG + F ++PD+V + ++I GY NG+ E +L+L+ ++ +
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
T+ S++ L + +H +K F V +AL+ +Y+K ++
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
+F P + + SWNAMISG +QNG A+ LF +M P+ VT +LSAC+
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 347 MGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+G + G W + + S +F+ + V ++ + ++ G + EA+ +
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVS--TALIGMYAKCGSIAEARRLFD 479
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 170/366 (46%), Gaps = 15/366 (4%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
Q H+ + +G + +S+ L + G++ A F + ++ ++ G++ +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 112 DSEKALRLF-HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
+L +F H + + P+ T I+A S GR +HG ++ G +L +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
S++V MY K + DAR+ F+ + + D +LW ++I+GY +N + ++ ++ + E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 231 P-NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
+ T+ +L A + L L G Q+H+ K G V + ++Y+KCG + G
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+F D++++NAMI G + NG +L LF +++L G + + T V+L+ H+ L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE----AKEFIESAEVDHGLCLW 405
+ Y + F + H + + + KLNE K F ES E L W
Sbjct: 338 IYAIHGY--CLKSNF-----LSHASVSTALTTVYSKLNEIESARKLFDESPE--KSLPSW 388
Query: 406 RILLGG 411
++ G
Sbjct: 389 NAMISG 394
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 299/543 (55%), Gaps = 36/543 (6%)
Query: 5 YASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLD---------------- 48
YA G ++A ++FE+M C+ + ++ S + D N +E D
Sbjct: 473 YAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 49 ---------------TGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSG 93
G+QVH L++K GL + ++L+ +Y+KCG + DA + F
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ 153
+ ++ +A++ GY+Q+ + E+A+ LF M GV PSE T ++ AC ++ G Q
Sbjct: 592 EWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 154 MHGYSLKLGFGLQ-LYVLSSLVDMYAKCGSLADARRGFEYVQQP-DVVLWTSIITGYVQN 211
HG K GF + Y+ SL+ MY + +A F + P +VLWT +++G+ QN
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
G +E AL Y +M+ + ++P++ T +VL+ CS L++L +G+ +H+ I +L+
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
+ L MYAKCG + +F M R +V+SWN++I+G ++NG+ AL++FD M
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK 390
PD +TF+ +L+ACSH G V G F+MM ++ I V+H ACMVD+L R G L EA
Sbjct: 831 MPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEAD 890
Query: 391 EFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALG 450
+FIE+ + LW LLG CR H + G + EKL+EL SSAYVLLS+IY + G
Sbjct: 891 DFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQG 950
Query: 451 QWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
WE +R++M+ RGV K PG SWI+++ H+F GD H +I +I L L LMK
Sbjct: 951 CWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Query: 511 DEG 513
D+
Sbjct: 1011 DDA 1013
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 197/344 (57%), Gaps = 2/344 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG+ G AIE F MR + L S+LS + LD G VH+ A+K
Sbjct: 298 MISGHGKRGCETVAIEYFFNMR-KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S + V ++LV++Y+KC ++ A + FE KN + W+AM+ GYA +G+S K + LF
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M SG +FT +++ C+ + G Q H +K L+V ++LVDMYAKC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G+L DAR+ FE + D V W +II YVQ+ + A +L+ +M + I+ + +AS L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
KAC+ + L QGKQ+H +K G + ++ GS+L MY+KCG + D +F +P V+
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
S NA+I+G SQN + +A+ LF +ML G P +TF ++ AC
Sbjct: 597 SMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 38/410 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
MLS Y+S+G + + F + E + N+F + +LS R ++ GRQ+H +K
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL ALV +YAKC + DA R FE+ + N++ W+ + +GY ++G E+A+ +F
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G P V VIN Y +
Sbjct: 250 ERMRDEGHRPDHLAFVTVINT-----------------------------------YIRL 274
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G L DAR F + PDVV W +I+G+ + G A+ + M+ + T+ SVL
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
A +A LD G +HA IK G + VGS+L +MY+KC ++ +F + ++ +
Sbjct: 335 SAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
WNAMI G + NG +K +ELF M G D TF +LLS C+ ++ G + ++
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+ + + +VD+ ++ G L +A++ E D W ++G
Sbjct: 455 IKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIG 502
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 195/395 (49%), Gaps = 37/395 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+ SGY GL +EA+ +FE+MR +EG R H
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMR---DEGH---------------------RPDH------ 261
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L+ V+V N Y + G L DA F + + + W+ M++G+ + G A+ F
Sbjct: 262 --LAFVTVINT----YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+M S V + TL V++A + + G +H ++KLG +YV SSLV MY+KC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ A + FE +++ + V W ++I GY NG+ + L+ M+ ++ T S+L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
C++ L+ G Q H+ IIK + VG+AL MYAKCG+L+D IF RM RD +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+WN +I Q+ + ++A +LF +M L G D + L AC+H+ + +G +
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCL 554
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
S + + + + ++D+ S+ G + +A++ S
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 6/231 (2%)
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
A+ G+ +H SL LG + + +++VD+YAKC ++ A + F+++++ DV W S+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
Y G L + + +I PN+ T + VL C+ ++ G+Q+H +IK G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
G AL MYAKC + D +F + + + W + SG + G +A+ +F++M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 327 LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
EG +PD + FV +++ +G + F MS +P V + M+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMI 299
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 141/255 (55%), Gaps = 17/255 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLA--M 58
M+SG++ G +EA++ +++MR + ++ ++L + L GR +HSL +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMR-HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKAL 117
+ L + S N L+ +YAKCG + + + F E N ++W++++ GYA++G +E AL
Sbjct: 762 AHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDAL 819
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG-FGLQLYV--LSSLV 174
++F SM S ++P E T +GV+ ACS + +GR++ + + +G +G++ V ++ +V
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI--FEMMIGQYGIEARVDHVACMV 877
Query: 175 DMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
D+ + G L +A E +PD LW+S++ +GD ++ G++ E++I E
Sbjct: 878 DLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD-----DIRGEISAEKLIELE 932
Query: 234 LTMASVLKACSSLAA 248
+S S++ A
Sbjct: 933 PQNSSAYVLLSNIYA 947
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 12/216 (5%)
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
AL GK +H+ + G + E +G+A+ +YAKC + F +DV +WN+M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
S G K L F + P+ TF +LS C+ V+ G M I
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 368 PTVEHYA----CMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAY 423
+E + +VD+ ++ ++++A+ E VD W L G +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 424 AGEKLMELG-SPESSAYVLLSSIYTALGQWEDVELV 458
E++ + G P+ A+V + + Y LG+ +D L+
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 294/519 (56%), Gaps = 6/519 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG+ G K ++ LF +M + NEF ++ L L+ G Q+H +K
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMG-RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI 136
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +V V N+LV +Y+KCG +++A + F +++ I+W+AM+ G+ +G KAL F
Sbjct: 137 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF 196
Query: 121 HSMHCSGV--LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL--QLYVLSSLVDM 176
M + + P EFTL ++ ACS I G+Q+HG+ ++ GF + SLVD+
Sbjct: 197 GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDL 256
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
Y KCG L AR+ F+ +++ ++ W+S+I GY Q G+F A+ L+ ++Q + +
Sbjct: 257 YVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFAL 316
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
+S++ + A L QGKQM A +K LE V +++ MY KCG +D+ F M
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL 376
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
+DVISW +I+G ++G G K++ +F +ML +PD V ++ +LSACSH G++ G +
Sbjct: 377 KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 436
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
F + + I P VEHYAC+VD+L RAG+L EAK I++ + + +W+ LL CR H
Sbjct: 437 FSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
+ ++G G+ L+ + + + YV++S++Y G W + R + +G+ KE G SW+
Sbjct: 497 DIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE-GY 514
E++ VH F G+ HP I+ L+ + +++E GY
Sbjct: 557 EIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGY 595
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 207/388 (53%), Gaps = 10/388 (2%)
Query: 34 LTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSG 93
L SIL R D G QVH +K+G + +N L+ +Y KC A + F+
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ 153
+N ++WSA+++G+ +GD + +L LF M G+ P+EFT + AC L A+ +G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
+HG+ LK+GF + + V +SLVDMY+KCG + +A + F + ++ W ++I G+V G
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 214 FEGALNLYGKMQIERII--PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL--EVP 269
AL+ +G MQ I P+E T+ S+LKACSS + GKQ+H +++ GF+
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
+ +L +Y KCG L F ++ + +ISW+++I G +Q G +A+ LF ++
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYA--CMVDILSRAGKLN 387
++ D+ +++ + L+ +G +M + + +E +VD+ + G ++
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGK---QMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 388 EAKEFIESAEVDHGLCLWRILLGGCRNH 415
EA++ ++ + W +++ G H
Sbjct: 366 EAEKCFAEMQLKDVIS-WTVVITGYGKH 392
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 190/358 (53%), Gaps = 11/358 (3%)
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
LV ++ C+ +G Q+H Y LK G GL L + L+DMY KC A + F+ +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+ +VV W+++++G+V NGD +G+L+L+ +M + I PNE T ++ LKAC L AL++G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNG 313
Q+H +K GF + V VG++L MY+KCG +++ +F R+ R +ISWNAMI+G G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 314 HGNKALELFDKMLLEGTK--PDTVTFVNLLSACSHMGLVDRGWDYFK-MMSDEFDITPTV 370
+G+KAL+ F M K PD T +LL ACS G++ G ++ F +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 371 EHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLME 430
+VD+ + G L A++ + + + + W L+ G + ++L E
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 431 LGSPESSAYVLLSSIYTALGQWEDVELVR--RMMKARGVAKEPGCSWIELKSLVHVFV 486
L S S LSSI +G + D L+R + M+A V G L S+V +++
Sbjct: 307 LNSQIDS--FALSSI---IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 335 bits (858), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 292/529 (55%), Gaps = 1/529 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G++ LG EA+ ++M NE++ S L + D G Q+H L +K+
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L +L +YA+CG L+ A R F+ ++ +W+ ++ G A +G +++A+ +F
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M SG +P +L ++ A + A+ +G Q+H Y +K GF L V +SL+ MY C
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC 419
Query: 181 GSLADARRGFE-YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
L FE + D V W +I+T +Q+ L L+ M + P+ +TM ++
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L+ C +++L G Q+H +K G E + + L MYAKCGSL IF M RDV
Sbjct: 480 LRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV 539
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW+ +I G +Q+G G +AL LF +M G +P+ VTFV +L+ACSH+GLV+ G +
Sbjct: 540 VSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M E I+PT EH +C+VD+L+RAG+LNEA+ FI+ +++ + +W+ LL C+ N
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+ A E ++++ S+A+VLL S++ + G WE+ L+R MK V K PG SWIE++
Sbjct: 660 LAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTG 528
+H+F D HP+ D+I + L + M DE H L TG
Sbjct: 720 DKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNPQHKKRLQFIHETG 768
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 176/333 (52%), Gaps = 1/333 (0%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
+EA+E F+ + S++ + + L GR++H + + + N
Sbjct: 48 REALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPS 131
++++Y KCGSL DA F+F +N +++++++TGY+Q+G +A+RL+ M ++P
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 132 EFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE 191
+F +I AC+ + G+Q+H +KL L ++L+ MY + ++DA R F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 192 YVQQPDVVLWTSIITGYVQNG-DFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALD 250
+ D++ W+SII G+ Q G +FE +L + PNE S LKACSSL D
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 251 QGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLS 310
G Q+H IK G +L MYA+CG L+ +F ++ D SWN +I+GL+
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
NG+ ++A+ +F +M G PD ++ +LL A
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 209/413 (50%), Gaps = 5/413 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY+ G EAI L+ +M +E+ ++F SI+ + + G+Q+H+ +K
Sbjct: 139 VITGYSQNGQGAEAIRLYLKM-LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL 197
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S + NAL+ +Y + + DA R F K+ I+WS+++ G++Q G +AL
Sbjct: 198 ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL 257
Query: 121 HSMHCSGVL-PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M GV P+E+ + ACS L G Q+HG +K SL DMYA+
Sbjct: 258 KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG L ARR F+ +++PD W II G NG + A++++ +M+ IP+ +++ S+
Sbjct: 318 CGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSL 377
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-D 298
L A + AL QG Q+H+ IIK+GF ++ V ++L MY C L + +F D
Sbjct: 378 LCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+SWN +++ Q+ + L LF ML+ +PD +T NLL C + + G
Sbjct: 438 SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG-SQVH 496
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
S + + P ++D+ ++ G L +A+ +S + + + W L+ G
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG 548
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 161/308 (52%), Gaps = 9/308 (2%)
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
T + +I ACS ++ +GR++H + L + + ++ MY KCGSL DAR F+++
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+ ++V +TS+ITGY QNG A+ LY KM E ++P++ S++KAC+S + + GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNG 313
Q+HA +IK + + +AL AMY + + D +F+ +P +D+ISW+++I+G SQ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 314 HGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
+AL +ML G P+ F + L ACS + D G + + ++
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG-SQIHGLCIKSELAGNAIA 307
Query: 373 YACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG 432
+ D+ +R G LN A+ + E W +++ G N+ YA E +
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTAS-WNVIIAGLANN------GYADEAVSVFS 360
Query: 433 SPESSAYV 440
SS ++
Sbjct: 361 QMRSSGFI 368
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 334 bits (857), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 284/509 (55%), Gaps = 36/509 (7%)
Query: 42 NRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWS 101
++T L+ G++VH +G + + + N L+ +YAKCGSL DA + F+ N++ +W+
Sbjct: 96 SQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWN 155
Query: 102 AMVTGYAQSGDSEKALRLFHSM--------------------------------HCSGVL 129
MV GYA+ G E+A +LF M
Sbjct: 156 VMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR 215
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P+ FT+ + A + + I G+++HG+ ++ G + SSL+DMY KCG + +AR
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 275
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM--QIERIIPNELTMASVLKACSSLA 247
F+ + + DVV WTS+I Y ++ + +L+ ++ ER PNE T A VL AC+ L
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER--PNEYTFAGVLNACADLT 333
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
+ GKQ+H + + GF+ S+L MY KCG+++ + P D++SW ++I
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 393
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
G +QNG ++AL+ FD +L GTKPD VTFVN+LSAC+H GLV++G ++F ++++ ++
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
T +HY C+VD+L+R+G+ + K I + LW +LGGC + N D+ A ++
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 513
Query: 428 LMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVV 487
L ++ YV +++IY A G+WE+ +R+ M+ GV K PG SW E+K HVF+
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIA 573
Query: 488 GDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
D+ HP ++I LR L K MK+EGY P
Sbjct: 574 ADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 177/347 (51%), Gaps = 4/347 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GY +EA+ L+ M+ N F ++ ++ + + G+++H ++
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S + ++L+ +Y KCG +D+A F+ K+ ++W++M+ Y +S + LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ S P+E+T GV+NAC+DL G+Q+HGY ++GF + SSLVDMY KC
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G++ A+ + +PD+V WTS+I G QNG + AL + + P+ +T +VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 241 KACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-D 298
AC+ +++G + I K+ + + L + A+ G + + MP +
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 299 VISWNAMISGLSQNGHGNKALELFDKML-LEGTKPDT-VTFVNLLSA 343
W +++ G S G+ + A E ++ +E P T VT N+ +A
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAA 534
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 35/354 (9%)
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P T +I CS A+ EG+++H + GF + + + L+ MYAKCGSL DAR+
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 190 FE----------------YVQ---------------QPDVVLWTSIITGYVQNGDFEGAL 218
F+ Y + + D WT+++TGYV+ E AL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 219 NLYGKMQ-IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM 277
LY MQ + PN T++ + A +++ + +GK++H I++ G + + + S+L M
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 278 YAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
Y KCG +D+ IF ++ +DV+SW +MI ++ + LF +++ +P+ TF
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
+L+AC+ + + G M+ P + +VD+ ++ G + AK ++
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 398 VDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS-PESSAYVLLSSIYTALG 450
L W L+GGC + D + L++ G+ P+ +V + S T G
Sbjct: 382 -KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/504 (34%), Positives = 287/504 (56%), Gaps = 1/504 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G KE + F +M EE + + L + G+ +H+ +
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMS-RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G ++ + VAN+L T+Y +CG + D L FE ++ ++W++++ Y + G KA+ F
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M S V P+E T + +AC+ L +V G Q+H L LG L V +S++ MY+ C
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G+L A F+ ++ D++ W++II GY Q G E + M+ P + +AS+L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
++A ++ G+Q+HA + +G V S+L MY+KCGS+ + +IF D++
Sbjct: 419 SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIV 478
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
S AMI+G +++G +A++LF+K L G +PD+VTF+++L+AC+H G +D G+ YF MM
Sbjct: 479 SLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMM 538
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+ +++ P EHY CMVD+L RAG+L++A++ I +W LL C+ + +
Sbjct: 539 QETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIER 598
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G A E+++EL ++A V L++IY++ G E+ VR+ MKA+GV KEPG S I++K
Sbjct: 599 GRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKD 658
Query: 481 LVHVFVVGDSMHPQIDEIRSELRL 504
V FV GD HPQ ++I + L L
Sbjct: 659 CVSAFVSGDRFHPQSEDIYNILEL 682
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 228/453 (50%), Gaps = 4/453 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEE-GENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
++ Y + + EA+ LF MR + + VL+ +L ++ + G +H+ A+K
Sbjct: 77 IIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVK 136
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
LLS V V ++L+ +Y + G +D + R F +N++TW+A++TG +G ++ L
Sbjct: 137 TSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTY 196
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M S L +T + AC+ L + G+ +H + + GF L V +SL MY +
Sbjct: 197 FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTE 256
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG + D FE + + DVV WTS+I Y + G A+ + KM+ ++ PNE T AS+
Sbjct: 257 CGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASM 316
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
AC+SL+ L G+Q+H ++ G N + V +++ MY+ CG+L ++F M RD+
Sbjct: 317 FSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
ISW+ +I G Q G G + + F M GTKP +LLS +M +++ G
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHA 435
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
++ F + + ++++ S+ G + EA + D + L ++ G H
Sbjct: 436 LALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL-TAMINGYAEHGKSK 494
Query: 420 IGAYAGEKLMELG-SPESSAYVLLSSIYTALGQ 451
EK +++G P+S ++ + + T GQ
Sbjct: 495 EAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 142/270 (52%), Gaps = 2/270 (0%)
Query: 80 GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC--SGVLPSEFTLVG 137
G+L A + F+ + + ++W++++ Y + +S++AL LF +M V P L
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
V+ AC I G +H Y++K +YV SSL+DMY + G + + R F + +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
V WT+IITG V G ++ L + +M + + T A LKAC+ L + GK +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNK 317
+I GF + V ++L+ MY +CG + DG +F M RDV+SW ++I + G K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
A+E F KM P+ TF ++ SAC+ +
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASL 323
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 15/227 (6%)
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI--ERIIPNELTMAS 238
G+L AR+ F+ + D+V WTSII YV + + AL L+ M++ + P+ ++
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VLKAC + + G+ +HA +K V VGS+L MY + G +D +F MP R+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
++W A+I+GL G + L F +M DT TF L AC+ + R Y K
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL----RQVKYGK 229
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLW 405
+ + V C+ + L A + E E+ GLCL+
Sbjct: 230 AIHTHVIVRGFVTTL-CVANSL--------ATMYTECGEMQDGLCLF 267
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 288/483 (59%), Gaps = 17/483 (3%)
Query: 51 RQVHSLAMKNGLLSIVSVANA---------LVTLYAKCGSLDDALRTF-EFSGNKNSITW 100
RQ+H+ ++++G VS+++A LV+L + + A + F + N W
Sbjct: 34 RQIHAFSIRHG----VSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFSKIEKPINVFIW 88
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVL-PSEFTLVGVINACSDLCAIVEGRQMHGYSL 159
+ ++ GYA+ G+S A L+ M SG++ P T +I A + + + G +H +
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 160 KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALN 219
+ GFG +YV +SL+ +YA CG +A A + F+ + + D+V W S+I G+ +NG E AL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 220 LYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
LY +M + I P+ T+ S+L AC+ + AL GK++H +IK G + + L +YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM-LLEGTKPDTVTFV 338
+CG +++ +F M ++ +SW ++I GL+ NG G +A+ELF M EG P +TFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 339 NLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV 398
+L ACSH G+V G++YF+ M +E+ I P +EH+ CMVD+L+RAG++ +A E+I+S +
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 399 DHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELV 458
+ +WR LLG C H + D+ +A ++++L S YVLLS++Y + +W DV+ +
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448
Query: 459 RRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHL 518
R+ M GV K PG S +E+ + VH F++GD HPQ D I ++L+ +T ++ EGY P +
Sbjct: 449 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 508
Query: 519 DSL 521
++
Sbjct: 509 SNV 511
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 178/336 (52%), Gaps = 5/336 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYA +G + A L+ +MR + ++ + + G +HS+ +++
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S++ V N+L+ LYA CG + A + F+ K+ + W++++ G+A++G E+AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M+ G+ P FT+V +++AC+ + A+ G+++H Y +K+G L+ + L+D+YA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ-IERIIPNELTMASV 239
G + +A+ F+ + + V WTS+I G NG + A+ L+ M+ E ++P E+T +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 240 LKACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR- 297
L ACS + +G + + +Y + + + A+ G + Y MP +
Sbjct: 331 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 390
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
+V+ W ++ + HG+ L F ++ + +P+
Sbjct: 391 NVVIWRTLLGACTV--HGDSDLAEFARIQILQLEPN 424
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/494 (36%), Positives = 278/494 (56%), Gaps = 9/494 (1%)
Query: 52 QVHSLAMKNGLLSIVSVANAL--VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
Q+ + A+K+ + + VA + T S+ A FE + + +++M GY++
Sbjct: 47 QIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSR 106
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
+ + LF + G+LP +T ++ AC+ A+ EGRQ+H S+KLG +YV
Sbjct: 107 FTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYV 166
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
+L++MY +C + AR F+ + +P VV + ++ITGY + AL+L+ +MQ + +
Sbjct: 167 CPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYL 226
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
PNE+T+ SVL +C+ L +LD GK +H K+ F V V +AL M+AKCGSLDD
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
IF +M +D +W+AMI + +G K++ +F++M E +PD +TF+ LL+ACSH G
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
V+ G YF M +F I P+++HY MVD+LSRAG L +A EFI+ + LWRILL
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 410 GGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAK 469
C +H N D+ E++ EL YV+LS++Y +WE V+ +R++MK R K
Sbjct: 407 AACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVK 466
Query: 470 EPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGD 529
PGCS IE+ ++VH F GD + ++ L + K +K GY P S
Sbjct: 467 VPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD-----TSMVVHA 521
Query: 530 DLGDQEGSHEIQLR 543
++ DQE EI LR
Sbjct: 522 NMNDQEK--EITLR 533
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 193/373 (51%), Gaps = 20/373 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
M GY+ E LF ++ E+G + + S+L + L+ GRQ+H L+M
Sbjct: 100 MARGYSRFTNPLEVFSLFVEIL---EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K GL V V L+ +Y +C +D A F+ + ++AM+TGYA+ +AL
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M + P+E TL+ V+++C+ L ++ G+ +H Y+ K F + V ++L+DM+A
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCGSL DA FE ++ D W+++I Y +G E ++ ++ +M+ E + P+E+T
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 239 VLKACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
+L ACS +++G++ + ++ K+G + ++ + ++ G+L+D Y ++P
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 298 DV-ISWNAMISGLSQNGHGNKALELFDKM--LLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
+ W +++ S + + + A ++ +++ L + D V NL + ++ W
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR-------NKKW 449
Query: 355 DYF----KMMSDE 363
+Y K+M D
Sbjct: 450 EYVDSLRKVMKDR 462
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/523 (35%), Positives = 289/523 (55%), Gaps = 16/523 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFV-LTSILSDLNRTEFLDTG-RQVHSLAM 58
M+SG G A++LF++M E V T++++ R+ +D R + + +
Sbjct: 103 MISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPV 156
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K+ + N++V Y + G +DDAL+ F+ KN I+W+ M+ G Q+ S +AL
Sbjct: 157 KD-----TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALD 211
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF +M + + VI AC++ A G Q+HG +KLGF + YV +SL+ YA
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA 271
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
C + D+R+ F+ V +WT++++GY N E AL+++ M I+PN+ T AS
Sbjct: 272 NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFAS 331
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
L +CS+L LD GK+MH +K G + VG++L MY+ G+++D +F ++ +
Sbjct: 332 GLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKS 391
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
++SWN++I G +Q+G G A +F +M+ +PD +TF LLSACSH G +++G F
Sbjct: 392 IVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFY 451
Query: 359 MMSDEFD-ITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
MS + I ++HY CMVDIL R GKL EA+E IE V +W LL CR H +
Sbjct: 452 YMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
D G A + L S S+AYVLLS+IY + G+W +V +R MK G+ K+PG SW+
Sbjct: 512 VDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Query: 478 LKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDS 520
++ H F GD P I +L L + +K+ GY P S
Sbjct: 572 IRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRS 612
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 8/288 (2%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
VS+ ++T Y + L DAL F+ ++ ++W++M++G + GD A++LF M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
V+ + ++N C + + ++ Y + + +S+V Y + G + D
Sbjct: 126 RSVV----SWTAMVNGCFRSGKVDQAERLF-YQMPVK---DTAAWNSMVHGYLQFGKVDD 177
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS 245
A + F+ + +V+ WT++I G QN AL+L+ M I V+ AC++
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
A G Q+H IIK GF E V ++L YA C + D +F V W A+
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+SG S N AL +F ML P+ TF + L++CS +G +D G
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG 345
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 42/204 (20%)
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP------------- 231
+AR F V P V L+T +ITGY ++ ALNL+ +M + ++
Sbjct: 53 EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD 112
Query: 232 --------NELTMASV------LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM 277
+E+ SV + C +DQ +++ + + V +A ++M
Sbjct: 113 MNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLF-------YQMPVKDTAAWNSM 165
Query: 278 ---YAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
Y + G +DD +F +MP ++VISW MI GL QN +AL+LF ML K +
Sbjct: 166 VHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTS 225
Query: 335 VTFVNLLSACS-----HMGLVDRG 353
F +++AC+ HMG+ G
Sbjct: 226 RPFTCVITACANAPAFHMGIQVHG 249
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 278 YAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
Y + L D +F MP RDV+SWN+MISG + G N A++LFD+M + V++
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM----PERSVVSW 131
Query: 338 VNLLSACSHMGLVDRGWDYFKMM 360
+++ C G VD+ F M
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQM 154
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 331 bits (849), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 287/523 (54%), Gaps = 31/523 (5%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
++F IL +++ L G ++H +A K L V + +YA CG ++ A F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ +++ +TW+ M+ Y + G ++A +LF M S V+P E L +++AC +
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYA------------------------------- 178
R ++ + ++ + ++L++LV MYA
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG L DA+ F+ ++ D+V WT++I+ YV++ + AL ++ +M I P+ ++M S
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
V+ AC++L LD+ K +H+ I G E+ + +AL MYAKCG LD +F +MP R+
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
V+SW++MI+ LS +G + AL LF +M E +P+ VTFV +L CSH GLV+ G F
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M+DE++ITP +EHY CMVD+ RA L EA E IES V + +W L+ CR H
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
++G +A ++++EL A VL+S+IY +WEDV +RR+M+ + V KE G S I+
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSL 521
H F++GD H Q +EI ++L + +K GY P S+
Sbjct: 590 NGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSV 632
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 173/346 (50%), Gaps = 34/346 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ Y GL EA +LFE+M+ + +E +L +I+S RT + R ++ ++N
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMK-DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 61 GLLSIVSVANALVTLYA-------------------------------KCGSLDDALRTF 89
+ + ALVT+YA KCG LDDA F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ + K+ + W+ M++ Y +S ++ALR+F M CSG+ P ++ VI+AC++L +
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
+ + +H G +L + ++L++MYAKCG L R FE + + +VV W+S+I
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII-KYGFNLEV 268
+G+ AL+L+ +M+ E + PNE+T VL CS +++GK++ A + +Y ++
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPT-RDVISWNAMISGLSQNG 313
+ ++ + L + + MP +V+ W +++S +G
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 143/288 (49%), Gaps = 31/288 (10%)
Query: 97 SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG 156
SI ++ + ++S + + + + G +F+ + ++ A S + A+ EG ++HG
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 157 YSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEG 216
+ K+ +V + +DMYA CG + AR F+ + DVV W ++I Y + G +
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 217 ALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA 276
A L+ +M+ ++P+E+ + +++ AC + + ++ +I+ ++ + +AL
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 277 MYA-------------------------------KCGSLDDGYLIFWRMPTRDVISWNAM 305
MYA KCG LDD +IF + +D++ W M
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
IS ++ + +AL +F++M G KPD V+ +++SAC+++G++D+
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 331 bits (848), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 185/515 (35%), Positives = 296/515 (57%), Gaps = 11/515 (2%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSV 68
G K+AI + Q E + + L IL +R+ D R VH + NG +
Sbjct: 60 GKLKQAIRVLSQ---ESSPSQQTYELL-ILCCGHRSSLSDALR-VHRHILDNGSDQDPFL 114
Query: 69 ANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
A L+ +Y+ GS+D A + F+ + + W+A+ +G E+ L L+ M+ GV
Sbjct: 115 ATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGV 174
Query: 129 LPSEFTLVGVINAC-SDLCAI---VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLA 184
FT V+ AC + C + ++G+++H + + G+ +Y++++LVDMYA+ G +
Sbjct: 175 ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVD 234
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI--IPNELTMASVLKA 242
A F + +VV W+++I Y +NG AL + +M E PN +TM SVL+A
Sbjct: 235 YASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
Query: 243 CSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISW 302
C+SLAAL+QGK +H I++ G + +PV SAL MY +CG L+ G +F RM RDV+SW
Sbjct: 295 CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSW 354
Query: 303 NAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD 362
N++IS +G+G KA+++F++ML G P VTFV++L ACSH GLV+ G F+ M
Sbjct: 355 NSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR 414
Query: 363 EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGA 422
+ I P +EHYACMVD+L RA +L+EA + ++ + G +W LLG CR H N ++
Sbjct: 415 DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAE 474
Query: 423 YAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLV 482
A +L L + YVLL+ IY W++V+ V+++++ RG+ K PG W+E++ +
Sbjct: 475 RASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKM 534
Query: 483 HVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPH 517
+ FV D +P +++I + L L + MK++GY P
Sbjct: 535 YSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 1 MLSGYASLGLAKEAIELF-EQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
M++ YA G A EA+ F E MR ++ N + S+L L+ G+ +H ++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL SI+ V +ALVT+Y +CG L+ R F+ +++ ++W+++++ Y G +KA+++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK-LGFGLQLYVLSSLVDMYA 178
F M +G P+ T V V+ ACS + EG+++ + G Q+ + +VD+
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 179 KCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGA 217
+ L +A + + ++ +P +W S++ +G+ E A
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%)
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
EG L ++ + P++ T ++ C ++L ++H I+ G + + + + L
Sbjct: 59 EGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKL 118
Query: 275 SAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
MY+ GS+D +F + R + WNA+ L+ GHG + L L+ KM G + D
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178
Query: 335 VTFVNLLSAC 344
T+ +L AC
Sbjct: 179 FTYTYVLKAC 188
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 300/527 (56%), Gaps = 4/527 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY GL +E++ F +M + +S+L +++ E L+ +Q+H M++
Sbjct: 311 MISGYVQSGLMEESLTFFYEM-ISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ + + +AL+ Y KC + A F + + + ++AM++GY +G +L +F
Sbjct: 370 SISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF 429
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ + P+E TLV ++ L A+ GR++HG+ +K GF + + +++DMYAKC
Sbjct: 430 RWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + A FE + + D+V W S+IT Q+ + A++++ +M + I + +++++ L
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC++L + GK +H +IK+ +V S L MYAKCG+L +F M ++++
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLE-GTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
SWN++I+ +G +L LF +M+ + G +PD +TF+ ++S+C H+G VD G +F+
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M++++ I P EHYAC+VD+ RAG+L EA E ++S +W LLG CR H+N +
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVE 729
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+ A KLM+L S YVL+S+ + +WE V VR +MK R V K PG SWIE+
Sbjct: 730 LAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY--QPHLDSLPES 524
H+FV GD HP+ I S L L ++ EGY QP+L PES
Sbjct: 790 KRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLHPES 836
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 226/415 (54%), Gaps = 3/415 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
ML+GYA G I+ F MR ++ N +LS +D G Q+H L + +
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMR-MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ S+ N+L+++Y+KCG DDA + F +++TW+ M++GY QSG E++L F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M SGVLP T ++ + S + +Q+H Y ++ L +++ S+L+D Y KC
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
++ A+ F DVV++T++I+GY+ NG + +L ++ + +I PNE+T+ S+L
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
L AL G+++H IIK GF+ +G A+ MYAKCG ++ Y IF R+ RD++
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SWN+MI+ +Q+ + + A+++F +M + G D V+ LSAC+++ G M
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
+ V + ++D+ ++ G L A ++ + + + W ++ C NH
Sbjct: 569 IKH-SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 4/336 (1%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
K+++ L R EE L+ +L + L G+QVH+ + N +
Sbjct: 18 KKSLPLRNSSRFLEETIPRR--LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDER 75
Query: 72 LVTLYAKCGSLDDALRTF-EFSGNKNSI-TWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
++ +YA CGS D + F ++SI W+++++ + ++G +AL + M C GV
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P T ++ AC L + LG +V SSL+ Y + G + +
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F+ V Q D V+W ++ GY + G + + + M++++I PN +T VL C+S +
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
D G Q+H ++ G + E + ++L +MY+KCG DD +F M D ++WN MISG
Sbjct: 256 DLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
Q+G ++L F +M+ G PD +TF +LL + S
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 176/351 (50%), Gaps = 4/351 (1%)
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
VA++L+ Y + G +D + F+ K+ + W+ M+ GYA+ G + ++ F M
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR 187
+ P+ T V++ C+ I G Q+HG + G + + +SL+ MY+KCG DA
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 188 RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA 247
+ F + + D V W +I+GYVQ+G E +L + +M ++P+ +T +S+L + S
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
L+ KQ+H I+++ +L++ + SAL Y KC + IF + + DV+ + AMIS
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE-FDI 366
G NG +LE+F ++ P+ +T V++L + + G + + + FD
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN 474
Query: 367 TPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
+ ++D+ ++ G++N A E E + W ++ C N
Sbjct: 475 RCNIG--CAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 297/553 (53%), Gaps = 32/553 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GYA AK+A++LF +M +EE N + ++S + E L+TG +V++ +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ + +ALV +Y KC ++D A R F+ G N +AM + Y + G + +AL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M SGV P +++ I++CS L I+ G+ HGY L+ GF + ++L+DMY KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGD--------------------------- 213
A R F+ + VV W SI+ GYV+NG+
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 214 ----FEGALNLYGKMQI-ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
FE A+ ++ MQ E + + +TM S+ AC L ALD K ++ I K G L+V
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
+G+ L M+++CG + IF + RDV +W A I ++ G+ +A+ELFD M+ +
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G KPD V FV L+ACSH GLV +G + F M ++P HY CMVD+L RAG L E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A + IE ++ +W LL CR N ++ AYA EK+ L + +YVLLS++Y +
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKL 508
G+W D+ VR MK +G+ K PG S I+++ H F GD HP++ I + L +++
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Query: 509 MKDEGYQPHLDSL 521
G+ P L ++
Sbjct: 746 ASHLGHVPDLSNV 758
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 241/507 (47%), Gaps = 42/507 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYAS GL EAI LF +M +++ LS ++ G Q+H L +K
Sbjct: 105 LIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V N+LV YA+CG LD A + F+ +N ++W++M+ GYA+ ++ A+ LF
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 121 HSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M V P+ T+V VI+AC+ L + G +++ + G + ++S+LVDMY K
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C ++ A+R F+ ++ L ++ + YV+ G AL ++ M + P+ ++M S
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ +CS L + GK H +++ GF + +AL MY KC D + IF RM + V
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 300 ISWNAMISGLSQNGHGNKALELFDKML--------------------------------L 327
++WN++++G +NG + A E F+ M
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKL 386
EG D VT +++ SAC H+G +D W Y+ + ++ I V +VD+ SR G
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYI--EKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 387 NEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG-SPESSAYV--LLS 443
A S + + W +G N + + ++E G P+ A+V L +
Sbjct: 522 ESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 444 SIYTALGQWEDVELVRRMMKARGVAKE 470
+ L Q + E+ M+K GV+ E
Sbjct: 581 CSHGGLVQ-QGKEIFYSMLKLHGVSPE 606
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 171/314 (54%), Gaps = 5/314 (1%)
Query: 39 SDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCG---SLDDALRTFEFSGNK 95
S L + +D + H K GL + VS LV + G SL A FE S +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 96 NS-ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
+ +++++ GYA SG +A+ LF M SG+ P ++T ++AC+ A G Q+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG +K+G+ L+V +SLV YA+CG L AR+ F+ + + +VV WTS+I GY +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 215 EGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
+ A++L+ +M + E + PN +TM V+ AC+ L L+ G++++A I G + + SA
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L MY KC ++D +F ++ NAM S + G +AL +F+ M+ G +PD
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 334 TVTFVNLLSACSHM 347
++ ++ +S+CS +
Sbjct: 337 RISMLSAISSCSQL 350
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 297/553 (53%), Gaps = 32/553 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GYA AK+A++LF +M +EE N + ++S + E L+TG +V++ +
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ + +ALV +Y KC ++D A R F+ G N +AM + Y + G + +AL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M SGV P +++ I++CS L I+ G+ HGY L+ GF + ++L+DMY KC
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGD--------------------------- 213
A R F+ + VV W SI+ GYV+NG+
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 214 ----FEGALNLYGKMQI-ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
FE A+ ++ MQ E + + +TM S+ AC L ALD K ++ I K G L+V
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
+G+ L M+++CG + IF + RDV +W A I ++ G+ +A+ELFD M+ +
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G KPD V FV L+ACSH GLV +G + F M ++P HY CMVD+L RAG L E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A + IE ++ +W LL CR N ++ AYA EK+ L + +YVLLS++Y +
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKL 508
G+W D+ VR MK +G+ K PG S I+++ H F GD HP++ I + L +++
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Query: 509 MKDEGYQPHLDSL 521
G+ P L ++
Sbjct: 746 ASHLGHVPDLSNV 758
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 241/507 (47%), Gaps = 42/507 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYAS GL EAI LF +M +++ LS ++ G Q+H L +K
Sbjct: 105 LIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V N+LV YA+CG LD A + F+ +N ++W++M+ GYA+ ++ A+ LF
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 121 HSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M V P+ T+V VI+AC+ L + G +++ + G + ++S+LVDMY K
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C ++ A+R F+ ++ L ++ + YV+ G AL ++ M + P+ ++M S
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ +CS L + GK H +++ GF + +AL MY KC D + IF RM + V
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 300 ISWNAMISGLSQNGHGNKALELFDKML--------------------------------L 327
++WN++++G +NG + A E F+ M
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKL 386
EG D VT +++ SAC H+G +D W Y+ + ++ I V +VD+ SR G
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYI--EKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 387 NEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG-SPESSAYV--LLS 443
A S + + W +G N + + ++E G P+ A+V L +
Sbjct: 522 ESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 444 SIYTALGQWEDVELVRRMMKARGVAKE 470
+ L Q + E+ M+K GV+ E
Sbjct: 581 CSHGGLVQ-QGKEIFYSMLKLHGVSPE 606
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 171/314 (54%), Gaps = 5/314 (1%)
Query: 39 SDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCG---SLDDALRTFEFSGNK 95
S L + +D + H K GL + VS LV + G SL A FE S +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 96 NS-ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
+ +++++ GYA SG +A+ LF M SG+ P ++T ++AC+ A G Q+
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG +K+G+ L+V +SLV YA+CG L AR+ F+ + + +VV WTS+I GY +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 215 EGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
+ A++L+ +M + E + PN +TM V+ AC+ L L+ G++++A I G + + SA
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L MY KC ++D +F ++ NAM S + G +AL +F+ M+ G +PD
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 334 TVTFVNLLSACSHM 347
++ ++ +S+CS +
Sbjct: 337 RISMLSAISSCSQL 350
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/522 (36%), Positives = 300/522 (57%), Gaps = 6/522 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++G G EA+E ++ MR + F L S LS ++ G+Q+H ++K
Sbjct: 386 MITGLDQNGCFIEAVERYKSMR-RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDS-EKALRL 119
G+ VSV+NAL+TLYA+ G L++ + F + ++W++++ A+S S +A+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F + +G + T V++A S L G+Q+HG +LK + ++L+ Y K
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK 564
Query: 180 CGSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
CG + + F ++ D V W S+I+GY+ N AL+L M + A+
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL A +S+A L++G ++HA ++ +V VGSAL MY+KCG LD F MP R+
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLVDRGWDYF 357
SWN+MISG +++G G +AL+LF+ M L+G T PD VTFV +LSACSH GL++ G+ +F
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 744
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC--RNH 415
+ MSD + + P +EH++CM D+L RAG+L++ ++FIE + + +WR +LG C N
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANG 804
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
R ++G A E L +L + YVLL ++Y A G+WED+ R+ MK V KE G SW
Sbjct: 805 RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSW 864
Query: 476 IELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPH 517
+ +K VH+FV GD HP D I +L+ L + M+D GY P
Sbjct: 865 VTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 206/424 (48%), Gaps = 19/424 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDT--GRQVHSLAM 58
++SGY+ G KEA+ M +E N++ S+L + GRQ+H L
Sbjct: 73 IVSGYSRNGEHKEALVFLRDM-VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 59 KNGLLSIVSVANALVTLYAKC-GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
K V+N L+++Y KC GS+ AL F KNS++W+++++ Y+Q+GD A
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEG-----RQMHGYSLKLGFGLQLYVLSS 172
R+F SM G P+E+T ++ C++ E Q+ K G L+V S
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTA---CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ-IERIIP 231
LV +AK GSL+ AR+ F ++ + V ++ G V+ E A L+ M + + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 232 NELTMASVLKACSSLA---ALDQGKQMHAGIIKYGF-NLEVPVGSALSAMYAKCGSLDDG 287
+ SLA L +G+++H +I G + V +G+ L MYAKCGS+ D
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 288 YLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
+F+ M +D +SWN+MI+GL QNG +A+E + M P + T ++ LS+C+ +
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
G S + I V ++ + + G LNE ++ I S+ +H W
Sbjct: 429 KWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK-IFSSMPEHDQVSWNS 486
Query: 408 LLGG 411
++G
Sbjct: 487 IIGA 490
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 180/345 (52%), Gaps = 9/345 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTG--RQVHSLAM 58
++S Y+ G + A +F M+ + E+ S+++ D Q+
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSR-PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K+GLL+ + V + LV+ +AK GSL A + F +N++T + ++ G + E+A +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 119 LFHSMHCS-GVLPSEFTLVGVI---NACSDLCAIVEGRQMHGYSLKLGF-GLQLYVLSSL 173
LF M+ V P + ++ + ++ + +GR++HG+ + G + + + L
Sbjct: 296 LFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 174 VDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
V+MYAKCGS+ADARR F ++ D V W S+ITG QNG F A+ Y M+ I+P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
T+ S L +C+SL G+Q+H +K G +L V V +AL +YA+ G L++ IF
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 294 MPTRDVISWNAMISGLSQNGHG-NKALELFDKMLLEGTKPDTVTF 337
MP D +SWN++I L+++ +A+ F G K + +TF
Sbjct: 476 MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 145/282 (51%), Gaps = 5/282 (1%)
Query: 49 TGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYA 108
R HS KN L V + N L+ Y + G A + F+ +N ++W+ +V+GY+
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDL--CAIVEGRQMHGYSLKLGFGLQ 166
++G+ ++AL M G+ +++ V V+ AC ++ I+ GRQ+HG KL + +
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 167 LYVLSSLVDMYAKC-GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
V + L+ MY KC GS+ A F ++ + V W SII+ Y Q GD A ++ MQ
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 226 IERIIPNELTMASVLKACSSLAALDQG--KQMHAGIIKYGFNLEVPVGSALSAMYAKCGS 283
+ P E T S++ SL D +Q+ I K G ++ VGS L + +AK GS
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 284 LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
L +F +M TR+ ++ N ++ GL + G +A +LF M
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/486 (35%), Positives = 278/486 (57%), Gaps = 1/486 (0%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
N TS L+ +F + GR +H L + +GL + NALV++Y K G + ++ R
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
++ + W+A++ GYA+ D +KAL F +M GV + T+V V++AC ++
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 150 E-GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
E G+ +H Y + GF +V +SL+ MYAKCG L+ ++ F + +++ W +++
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
+G E L L KM+ + ++ + + L A + LA L++G+Q+H +K GF +
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
+ +A + MY+KCG + + + R + SWN +IS L ++G+ + F +ML
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G KP VTFV+LL+ACSH GLVD+G Y+ M++ +F + P +EH C++D+L R+G+L E
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 703
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A+ FI + +WR LL C+ H N D G A E L +L + S YVL S+++
Sbjct: 704 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKL 508
G+WEDVE VR+ M + + K+ CSW++LK V F +GD HPQ EI ++L + KL
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 823
Query: 509 MKDEGY 514
+K+ GY
Sbjct: 824 IKESGY 829
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 224/453 (49%), Gaps = 14/453 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRT-EFLDTGRQVHSLAMK 59
M+SG +GL E +E F +M C+ + FV+ S+++ R+ G QVH K
Sbjct: 12 MMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 70
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+GLLS V V+ A++ LY G + + + FE ++N ++W++++ GY+ G+ E+ + +
Sbjct: 71 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 130
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
+ M GV +E ++ VI++C L GRQ+ G +K G +L V +SL+ M
Sbjct: 131 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS 190
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G++ A F+ + + D + W SI Y QNG E + ++ M+ N T++++
Sbjct: 191 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 250
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L + G+ +H ++K GF+ V V + L MYA G + L+F +MPT+D+
Sbjct: 251 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 310
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
ISWN++++ +G AL L M+ G + VTF + L+AC ++G ++
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG----RI 366
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKE----FIESAEVDHGLCLWRILLGGCRNH 415
+ ++ + ++S GK+ E E ++ D + W L+GG
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD--VVAWNALIGGYAED 424
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
+ D A + + G SS Y+ + S+ +A
Sbjct: 425 EDPDKALAAFQTMRVEGV--SSNYITVVSVLSA 455
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 219/417 (52%), Gaps = 6/417 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ G +E I++++ MR E G NE ++ ++S + GRQ+ +K+
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 172
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S ++V N+L+++ G++D A F+ +++I+W+++ YAQ+G E++ R+F
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + T+ +++ + GR +HG +K+GF + V ++L+ MYA
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G +A F+ + D++ W S++ +V +G AL L M N +T S L
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC + ++G+ +H ++ G +G+AL +MY K G + + + +MP RDV+
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG-LVDRGWD-YFK 358
+WNA+I G +++ +KAL F M +EG + +T V++LSAC G L++RG +
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
++S F+ V++ ++ + ++ G L+ +++ + + + W +L +H
Sbjct: 473 IVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 526
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 138/254 (54%), Gaps = 1/254 (0%)
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV-EGRQ 153
+N ++W+ M++G + G + + F M G+ PS F + ++ AC ++ EG Q
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
+HG+ K G +YV ++++ +Y G ++ +R+ FE + +VV WTS++ GY G+
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
E +++Y M+ E + NE +M+ V+ +C L G+Q+ ++K G ++ V ++
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L +M G++D IF +M RD ISWN++ + +QNGH ++ +F M + +
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 334 TVTFVNLLSACSHM 347
+ T LLS H+
Sbjct: 244 STTVSTLLSVLGHV 257
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 278/488 (56%), Gaps = 5/488 (1%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
N TS L+ +F + GR +H L + +GL + NALV++Y K G + ++ R
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINAC---SDLC 146
++ + W+A++ GYA+ D +KAL F +M GV + T+V V++AC DL
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL- 479
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
+ G+ +H Y + GF +V +SL+ MYAKCG L+ ++ F + +++ W +++
Sbjct: 480 -LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
+G E L L KM+ + ++ + + L A + LA L++G+Q+H +K GF
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
+ + +A + MY+KCG + + + R + SWN +IS L ++G+ + F +ML
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 327 LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKL 386
G KP VTFV+LL+ACSH GLVD+G Y+ M++ +F + P +EH C++D+L R+G+L
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 387 NEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIY 446
EA+ FI + +WR LL C+ H N D G A E L +L + S YVL S+++
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 778
Query: 447 TALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLT 506
G+WEDVE VR+ M + + K+ CSW++LK V F +GD HPQ EI ++L +
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 838
Query: 507 KLMKDEGY 514
KL+K+ GY
Sbjct: 839 KLIKESGY 846
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 224/453 (49%), Gaps = 14/453 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRT-EFLDTGRQVHSLAMK 59
M+SG +GL E +E F +M C+ + FV+ S+++ R+ G QVH K
Sbjct: 29 MMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 87
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+GLLS V V+ A++ LY G + + + FE ++N ++W++++ GY+ G+ E+ + +
Sbjct: 88 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 147
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
+ M GV +E ++ VI++C L GRQ+ G +K G +L V +SL+ M
Sbjct: 148 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS 207
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G++ A F+ + + D + W SI Y QNG E + ++ M+ N T++++
Sbjct: 208 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 267
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L + G+ +H ++K GF+ V V + L MYA G + L+F +MPT+D+
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 327
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
ISWN++++ +G AL L M+ G + VTF + L+AC ++G ++
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG----RI 383
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKE----FIESAEVDHGLCLWRILLGGCRNH 415
+ ++ + ++S GK+ E E ++ D + W L+GG
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD--VVAWNALIGGYAED 441
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
+ D A + + G SS Y+ + S+ +A
Sbjct: 442 EDPDKALAAFQTMRVEGV--SSNYITVVSVLSA 472
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 219/417 (52%), Gaps = 6/417 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ G +E I++++ MR E G NE ++ ++S + GRQ+ +K+
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S ++V N+L+++ G++D A F+ +++I+W+++ YAQ+G E++ R+F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + T+ +++ + GR +HG +K+GF + V ++L+ MYA
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G +A F+ + D++ W S++ +V +G AL L M N +T S L
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC + ++G+ +H ++ G +G+AL +MY K G + + + +MP RDV+
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG-LVDRGWD-YFK 358
+WNA+I G +++ +KAL F M +EG + +T V++LSAC G L++RG +
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 489
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
++S F+ V++ ++ + ++ G L+ +++ + + + W +L +H
Sbjct: 490 IVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH 543
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 146/274 (53%), Gaps = 1/274 (0%)
Query: 75 LYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFT 134
+Y K G + A F+ +N ++W+ M++G + G + + F M G+ PS F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 135 LVGVINACSDLCAIV-EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
+ ++ AC ++ EG Q+HG+ K G +YV ++++ +Y G ++ +R+ FE +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+VV WTS++ GY G+ E +++Y M+ E + NE +M+ V+ +C L G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNG 313
Q+ ++K G ++ V ++L +M G++D IF +M RD ISWN++ + +QNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 314 HGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
H ++ +F M + ++ T LLS H+
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 274
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 277 MYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVT 336
MY K G + +F MP R+ +SWN M+SG+ + G + +E F KM G KP +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 337 FVNLLSACSHMGLVDR 352
+L++AC G + R
Sbjct: 61 IASLVTACGRSGSMFR 76
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 288/505 (57%), Gaps = 17/505 (3%)
Query: 49 TGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYA 108
+G+Q H A G S + V++AL+ +Y+ CG L+DA + F+ +N ++W++M+ GY
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 109 QSGDSEKALRLFHSMHCS------GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG 162
+G++ A+ LF + + LV VI+ACS + A +H + +K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 163 FGLQLYVLSSLVDMYAKCGS--LADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
F + V ++L+D YAK G +A AR+ F+ + D V + SI++ Y Q+G A +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 221 YGKMQIERIIP-NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
+ ++ +++ N +T+++VL A S AL GK +H +I+ G +V VG+++ MY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
KCG ++ F RM ++V SW AMI+G +GH KALELF M+ G +P+ +TFV+
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 340 LLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVD 399
+L+ACSH GL GW +F M F + P +EHY CMVD+L RAG L +A + I+ ++
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 400 HGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVR 459
+W LL CR H+N ++ + +L EL S Y+LLS IY G+W+DVE VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 460 RMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLD 519
+MK RG+ K PG S +EL VHVF++GD HPQ ++I L L + + + GY
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGY----- 568
Query: 520 SLPESETTGDDLGDQEGSHEIQLRV 544
+ + + D+ ++E E+ LRV
Sbjct: 569 -VSNTSSVCHDVDEEE--KEMTLRV 590
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 171/326 (52%), Gaps = 17/326 (5%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+W++++ A+SGDS +AL F SM + P+ + I ACS L I G+Q H
Sbjct: 42 FSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQ 101
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGA 217
+ G+ ++V S+L+ MY+ CG L DAR+ F+ + + ++V WTS+I GY NG+ A
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 218 LNLYGKMQIER------IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
++L+ + ++ + + + + SV+ ACS + A + +H+ +IK GF+ V VG
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 272 SALSAMYAKCGS--LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
+ L YAK G + IF ++ +D +S+N+++S +Q+G N+A E+F +++
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 330 TKP-DTVTFVNLLSACSHMGLVDRG---WDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
+ +T +L A SH G + G D M E D+ ++D+ + G+
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS----IIDMYCKCGR 337
Query: 386 LNEAKEFIESAEVDHGLCLWRILLGG 411
+ A++ + + + + W ++ G
Sbjct: 338 VETARKAFDRMK-NKNVRSWTAMIAG 362
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 175/352 (49%), Gaps = 41/352 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVL-----TSILSDLNRTEFLDTGRQVHS 55
M+ GY G A +A+ LF+ + +E + ++ L S++S +R +HS
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGS--LDDALRTFEFSGNKNSITWSAMVTGYAQSGDS 113
+K G VSV N L+ YAK G + A + F+ +K+ ++++++++ YAQSG S
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 114 EKALRLFHSMHCSGVLP-SEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS 172
+A +F + + V+ + TL V+ A S A+ G+ +H +++G + V +S
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
++DMY KCG + AR+ F+ ++ +V WT++I GY +G AL L+ M + PN
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T SVL ACS HAG+ G+ +AM + G ++ G
Sbjct: 388 YITFVSVLAACS-----------HAGLHVEGWRW-------FNAMKGRFG-VEPG----- 423
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
+ + M+ L + G KA +L +M + KPD++ + +LL+AC
Sbjct: 424 ------LEHYGCMVDLLGRAGFLQKAYDLIQRMKM---KPDSIIWSSLLAAC 466
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 191 EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALD 250
YV + DV W S+I ++GD AL + M+ + P + +KACSSL +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 251 QGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLS 310
GKQ H +G+ ++ V SAL MY+ CG L+D +F +P R+++SW +MI G
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTF------VNLLSACS-----------HMGLVDRG 353
NG+ A+ LF +L++ D F V+++SACS H ++ RG
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 354 WD 355
+D
Sbjct: 214 FD 215
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 282/519 (54%), Gaps = 7/519 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG+ G +A+E + +MR +++ S+L + E D ++VH LA K
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGIL-PDKYTFPSLLKGSDAMELSDV-KKVHGLAFKL 189
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G S V + LVT Y+K S++DA + F E +S+ W+A+V GY+Q E AL +
Sbjct: 190 GFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLV 249
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M GV S T+ V++A + I GR +HG ++K G G + V ++L+DMY K
Sbjct: 250 FSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGK 309
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
L +A FE + + D+ W S++ + GD +G L L+ +M I P+ +T+ +V
Sbjct: 310 SKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTV 369
Query: 240 LKACSSLAALDQGKQMHAGIIKYGF----NLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
L C LA+L QG+++H +I G + + ++L MY KCG L D ++F M
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
+D SWN MI+G G AL++F M G KPD +TFV LL ACSH G ++ G +
Sbjct: 430 VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRN 489
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
+ M ++I PT +HYAC++D+L RA KL EA E S + +WR +L CR H
Sbjct: 490 FLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLH 549
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
N D+ AG++L EL YVL+S++Y G++E+V VR M+ + V K PGCSW
Sbjct: 550 GNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSW 609
Query: 476 IELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
I LK+ VH F G+ HP+ I L L+ M Y
Sbjct: 610 IVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEY 648
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 193/368 (52%), Gaps = 8/368 (2%)
Query: 49 TGRQVHSLAMKNGLLSIVSVA-NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGY 107
+G+Q+H ++ G L A +LV +YAKCG + A+ F S ++ ++A+++G+
Sbjct: 78 SGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGF 136
Query: 108 AQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL 167
+G A+ + M +G+LP ++T ++ SD + + +++HG + KLGF
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDC 195
Query: 168 YVLSSLVDMYAKCGSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
YV S LV Y+K S+ DA++ F E + D VLW +++ GY Q FE AL ++ KM+
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
E + + T+ SVL A + +D G+ +H +K G ++ V +AL MY K L++
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
IF M RD+ +WN+++ G + L LF++ML G +PD VT +L C
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGR 375
Query: 347 MGLVDRGWDY--FKMMSDEFDITPTVEH-YACMVDILSRAGKLNEAKEFIESAEVDHGLC 403
+ + +G + + ++S + + E + ++D+ + G L +A+ +S V
Sbjct: 376 LASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 435
Query: 404 LWRILLGG 411
W I++ G
Sbjct: 436 -WNIMING 442
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 6/278 (2%)
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGF-GLQLYVLSSLVDMYAKCGSLADARRGFEY 192
T + + C+ V G+Q+HG+ ++ GF +SLV+MYAKCG + A F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 193 VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG 252
++ DV + ++I+G+V NG A+ Y +M+ I+P++ T S+LK ++ L
Sbjct: 122 SER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDV 179
Query: 253 KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQ 311
K++H K GF+ + VGS L Y+K S++D +F +P R D + WNA+++G SQ
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 312 NGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
AL +F KM EG T ++LSA + G +D G + + V
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
A ++D+ ++ L EA E+ + + L W +L
Sbjct: 300 SNA-LIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP-VGSALSAMYAKCGSLDDGYLI 290
N T + L+ C+ G+Q+H +++ GF + P G++L MYAKCG + L+
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F RDV +NA+ISG NG A+E + +M G PD TF +LL M L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 351 D 351
D
Sbjct: 178 D 178
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 298/533 (55%), Gaps = 7/533 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG+ G +A+E F +M + + L +++S + GR VH ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + +S+ N+L+ YAK + +A+ F+ K+ I+WS ++ Y Q+G + +AL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M G P+ T++ V+ AC+ + +GR+ H +++ G ++ V ++LVDMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASV 239
S +A F + + DVV W ++I+G+ NG ++ + M +E P+ + M V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L +CS L L+Q K H+ +IKYGF+ +G++L +Y++CGSL + +F + +D
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ W ++I+G +G G KALE F+ M+ KP+ VTF+++LSACSH GL+ G FK
Sbjct: 433 VVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
+M +++ + P +EHYA +VD+L R G L+ A E + + LLG CR H+N
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNG 552
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
++ +KL EL S + Y+L+S++Y G+WE+VE +R +K RG+ K S IE+
Sbjct: 553 EMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 612
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDL 531
+ VH FV D +HP+ + + L+ L MK++ L++ E GD L
Sbjct: 613 RRKVHRFVADDELHPEKEPVYGLLKELDLHMKED-----LENCVYFEYEGDSL 660
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 225/404 (55%), Gaps = 8/404 (1%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLL-SIVSVAN 70
+E + F M +EE+ +N F L L ++ G +H K+ L S + V +
Sbjct: 42 EEVLYHFSHMFRDEEKPDN-FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGS 100
Query: 71 ALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM-HCSGVL 129
+L+ +Y KCG + +ALR F+ + +TWS+MV+G+ ++G +A+ F M S V
Sbjct: 101 SLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVT 160
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P TL+ +++AC+ L GR +HG+ ++ GF L +++SL++ YAK + +A
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F+ + + DV+ W+++I YVQNG AL ++ M + PN T+ VL+AC++ L
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL 280
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
+QG++ H I+ G EV V +AL MY KC S ++ Y +F R+P +DV+SW A+ISG
Sbjct: 281 EQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGF 340
Query: 310 SQNGHGNKALELFDKMLLE-GTKPDTVTFVNLLSACSHMGLVDRGWDYFK-MMSDEFDIT 367
+ NG ++++E F MLLE T+PD + V +L +CS +G +++ + ++ FD
Sbjct: 341 TLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSN 400
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
P + A +V++ SR G L A + + + +W L+ G
Sbjct: 401 PFIG--ASLVELYSRCGSLGNASKVFNGIALKDTV-VWTSLITG 441
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 155/278 (55%), Gaps = 2/278 (0%)
Query: 78 KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVG 137
K S DA + F ++ W+ ++ ++ E+ L F M P FTL
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 138 VINACSDLCAIVEGRQMHGYSLK-LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP 196
+ AC +L + G +HG+ K + G LYV SSL+ MY KCG + +A R F+ +++P
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIER-IIPNELTMASVLKACSSLAALDQGKQM 255
D+V W+S+++G+ +NG A+ + +M + + P+ +T+ +++ AC+ L+ G+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHG 315
H +I+ GF+ ++ + ++L YAK + + +F + +DVISW+ +I+ QNG
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+AL +F+ M+ +GT+P+ T + +L AC+ +++G
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/481 (37%), Positives = 277/481 (57%), Gaps = 4/481 (0%)
Query: 1 MLSGYASLGLA--KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
+LSGY+ + + L+ +MR +G + F L + L+ G +H LAM
Sbjct: 78 ILSGYSKSKTCCYSDVLLLYNRMR-RHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAM 136
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
KNGL VA +LV +YA+ G+++ A + F+ +NS+ W ++ GY + + R
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL-YVLSSLVDMY 177
LF M +G+ TL+ ++ AC ++ A G+ +HG S++ F Q Y+ +S++DMY
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
KC L +AR+ FE +VV+WT++I+G+ + A +L+ +M E I+PN+ T+A
Sbjct: 257 VKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLA 316
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
++L +CSSL +L GK +H +I+ G ++ ++ MYA+CG++ +F MP R
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
+VISW++MI+ NG +AL+ F KM + P++VTFV+LLSACSH G V GW F
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQF 436
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
+ M+ ++ + P EHYACMVD+L RAG++ EAK FI++ V W LL CR H+
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKE 496
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
D+ EKL+ + +SS YVLLS+IY G WE V VRR M +G K G S E
Sbjct: 497 VDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATE 556
Query: 478 L 478
+
Sbjct: 557 V 557
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP-- 295
++L S L+ +Q+HA +I +GF EV +GS+L+ Y + LD F R+P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 296 TRDVISWNAMISGLSQNGHG--NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
R+ SWN ++SG S++ + L L+++M D+ V + AC +GL++ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 354 WDYFKM-MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+ M + D V +V++ ++ G + A++ + V + + LW +L+ G
Sbjct: 129 ILIHGLAMKNGLDKDDYVA--PSLVEMYAQLGTMESAQKVFDEIPVRNSV-LWGVLMKG 184
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 287/506 (56%), Gaps = 5/506 (0%)
Query: 11 AKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGL-LSIVSVA 69
+KEA+E++ M +E+ L+S+ + ++ H LA+ GL +S V V
Sbjct: 146 SKEAVEMYRLM-ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVG 204
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
+ALV +Y K G +A + K+ + +A++ GY+Q G+ +A++ F SM V
Sbjct: 205 SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ 264
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P+E+T V+ +C +L I G+ +HG +K GF L +SL+ MY +C + D+ R
Sbjct: 265 PNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRV 324
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F+ ++ P+ V WTS+I+G VQNG E AL + KM + I PN T++S L+ CS+LA
Sbjct: 325 FKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMF 384
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
++G+Q+H + KYGF+ + GS L +Y KCG D L+F + DVIS N MI
Sbjct: 385 EEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSY 444
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
+QNG G +AL+LF++M+ G +P+ VT +++L AC++ LV+ G + F + I T
Sbjct: 445 AQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLT 503
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM 429
+HYACMVD+L RAG+L EA E + + ++ L LWR LL C+ HR ++ K++
Sbjct: 504 NDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKIL 562
Query: 430 ELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGD 489
E+ + +L+S++Y + G+W V ++ MK + K P SW+E+ H F+ GD
Sbjct: 563 EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGD 622
Query: 490 SM-HPQIDEIRSELRLLTKLMKDEGY 514
HP ++I L L K KD GY
Sbjct: 623 LFSHPNSEQILENLEELIKKSKDLGY 648
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 173/304 (56%), Gaps = 2/304 (0%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+ + + +K+G + +S + LV KCG +D A + F+ ++ +TW++++ +
Sbjct: 85 KTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL-QLYV 169
S++A+ ++ M + VLP E+TL V A SDL E ++ HG ++ LG + ++V
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
S+LVDMY K G +A+ + V++ DVVL T++I GY Q G+ A+ + M +E++
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
PNE T ASVL +C +L + GK +H ++K GF + ++L MY +C +DD
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+F + + +SW ++ISGL QNG AL F KM+ + KP++ T + L CS++ +
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAM 383
Query: 350 VDRG 353
+ G
Sbjct: 384 FEEG 387
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 164/308 (53%), Gaps = 1/308 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ G EA++ F+ M E+ + NE+ S+L + + G+ +H L +K+
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQ-PNEYTYASVLISCGNLKDIGNGKLIHGLMVKS 296
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S ++ +L+T+Y +C +DD+LR F+ N ++W+++++G Q+G E AL F
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEF 356
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + P+ FTL + CS+L EGRQ+HG K GF Y S L+D+Y KC
Sbjct: 357 RKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G AR F+ + + DV+ ++I Y QNG AL+L+ +M + PN++T+ SVL
Sbjct: 417 GCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVL 476
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC++ +++G ++ K L + + + + G L++ ++ + D++
Sbjct: 477 LACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLV 536
Query: 301 SWNAMISG 308
W ++S
Sbjct: 537 LWRTLLSA 544
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 275/479 (57%), Gaps = 4/479 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GY L +E + LF +MR E NE+ +++ + L G+ H +K+
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ + +L+ +Y KCG + +A R F + + + W+AM+ GY +G +AL LF
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + P+ T+ V++ C + + GR +HG S+K+G V ++LV MYAKC
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKC 390
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
DA+ FE + D+V W SII+G+ QNG AL L+ +M E + PN +T+AS+
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 241 KACSSLAALDQGKQMHAGIIKYGF--NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
AC+SL +L G +HA +K GF + V VG+AL YAKCG LIF + ++
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
I+W+AMI G + G +LELF++ML + KP+ TF ++LSAC H G+V+ G YF
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M +++ TP+ +HY CMVD+L+RAG+L +A + IE + + + L GC H +
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
D+G +K+++L ++S YVL+S++Y + G+W + VR +MK RG++K G S +E
Sbjct: 631 DLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 218/405 (53%), Gaps = 6/405 (1%)
Query: 10 LAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVS 67
L KE++E+ + + G ++ V + L + LD G+++H +K V
Sbjct: 119 LNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV- 177
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
V L+ +YAKCG + A + F +N + W++M+ GY ++ E+ L LF+ M +
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 237
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR 187
VL +E+T +I AC+ L A+ +G+ HG +K G L +++SL+DMY KCG +++AR
Sbjct: 238 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNAR 297
Query: 188 RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA 247
R F D+V+WT++I GY NG AL+L+ KM+ I PN +T+ASVL C +
Sbjct: 298 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 357
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
L+ G+ +H IK G + V +AL MYAKC D +F +D+++WN++IS
Sbjct: 358 NLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDEFDI 366
G SQNG ++AL LF +M E P+ VT +L SAC+ +G + G + + F
Sbjct: 417 GFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLA 476
Query: 367 TPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+ +V ++D ++ G A+ ++ E + W ++GG
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 166/312 (53%), Gaps = 4/312 (1%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITW 100
L++ +D+ RQ H + NGL+ +S+A LV+LY G DA F+ + W
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLW 110
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
M+ Y + +S + ++L+ + G + + AC++L + G+++H +K
Sbjct: 111 KVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK 170
Query: 161 LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
+ VL+ L+DMYAKCG + A + F + +VV WTS+I GYV+N E L L
Sbjct: 171 VP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 221 YGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK 280
+ +M+ ++ NE T +++ AC+ L+AL QGK H ++K G L + ++L MY K
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 281 CGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
CG + + +F D++ W AMI G + NG N+AL LF KM KP+ VT ++
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 341 LSACSHMGLVDR 352
LS C GL++
Sbjct: 350 LSGC---GLIEN 358
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 159/324 (49%), Gaps = 12/324 (3%)
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
+++ C+++ ++ RQ HG G + + + LV +Y G DAR F+ + +PD
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
LW ++ Y N + + LY + +++ + LKAC+ L LD GK++H
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNK 317
++K + + V + L MYAKCG + + +F + R+V+ W +MI+G +N +
Sbjct: 167 QLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG-WDYFKMMSDEFDITPTVEHYACM 376
L LF++M + T+ L+ AC+ + + +G W + ++ +++ + +
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL--VTSL 283
Query: 377 VDILSRAGKLNEAKE-FIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPE 435
+D+ + G ++ A+ F E + VD L +W ++ G ++ + + +K+ G
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVD--LVMWTAMIVGYTHNGSVNEALSLFQKMK--GVEI 339
Query: 436 SSAYVLLSSIYTALGQWEDVELVR 459
V ++S+ + G E++EL R
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGR 363
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 289/535 (54%), Gaps = 40/535 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ Y + G E +++F M C + + +L + + + GR++H A K
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S + V N LV++Y KCG L +A + ++ ++W+++V GYAQ+ + AL +
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + T+ ++ A S+ E +YV DM+ K
Sbjct: 230 REMESVKISHDAGTMASLLPAVSN--TTTEN--------------VMYV----KDMFFKM 269
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + +V W +I Y++N A+ LY +M+ + P+ +++ SVL
Sbjct: 270 G-------------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC +AL GK++H I + + + +AL MYAKCG L+ +F M +RDV+
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SW AMIS +G G A+ LF K+ G PD++ FV L+ACSH GL++ G FK+M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+D + ITP +EH ACMVD+L RAGK+ EA FI+ ++ +W LLG CR H + DI
Sbjct: 437 TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G A +KL +L +S YVLLS+IY G+WE+V +R +MK++G+ K PG S +E+
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQE 535
++H F+VGD HPQ DEI EL +L K MK+ GY +P+SE+ D+ +++
Sbjct: 557 IIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY------VPDSESALHDVEEED 605
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 34/349 (9%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
+ T R VHS + L S+ L+ YA + A + F+ +N I + M+
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 107 YAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
Y +G + +++F +M V P +T V+ ACS IV GR++HG + K+G
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
L+V + LV MY KCG L++AR + + + DVV W S++ GY QN F+ AL + +M+
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
+I + TMAS+L A S+ + + MY K
Sbjct: 235 VKISHDAGTMASLLPAVSNT-------------------------TTENVMYVK------ 263
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
+F++M + ++SWN MI +N +A+EL+ +M +G +PD V+ ++L AC
Sbjct: 264 --DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
+ G + + + P + ++D+ ++ G L +A++ E+
Sbjct: 322 TSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFEN 369
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 287/476 (60%), Gaps = 4/476 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ ++ +AI LF +M +E +EF + S+LS L + L+ G+QVH +K+
Sbjct: 424 MITSFSQSKKPGKAIRLFTRM-LQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKS 479
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL+ ++V ++L TLY+KCGSL+++ + F+ K++ W++M++G+ + G +A+ LF
Sbjct: 480 GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G P E TL V+ CS ++ G+++HGY+L+ G + + S+LV+MY+KC
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
GSL AR+ ++ + + D V +S+I+GY Q+G + L+ M + + ++S+L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
KA + G Q+HA I K G E VGS+L MY+K GS+DD F ++ D+I
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+W A+I+ +Q+G N+AL++++ M +G KPD VTFV +LSACSH GLV+ + + M
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
++ I P HY CMVD L R+G+L EA+ FI + + +W LL C+ H ++
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
G A +K +EL ++ AY+ LS+I +G+W++VE R++MK GV KEPG S +
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 12/414 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY L +E++ F +M E NE S++S + + V +K
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEA-NEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V +AL+ +++K +DA + F S + N W+ ++ G ++ + LF
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
H M P +T V+ AC+ L + G+ + +K G ++V +++VD+YAKC
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKC 298
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G +A+A F + P VV WT +++GY ++ D AL ++ +M+ + N T+ SV+
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM---PTR 297
AC + + + Q+HA + K GF L+ V +AL +MY+K G +D +F + +
Sbjct: 359 SACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQ 418
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
+++ N MI+ SQ+ KA+ LF +ML EG + D + +LLS + L + Y
Sbjct: 419 NIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYT 476
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
D+T + + + S+ G L E+ + + C W ++ G
Sbjct: 477 LKSGLVLDLTVG----SSLFTLYSKCGSLEESYKLFQGIPFKDNAC-WASMISG 525
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 166/305 (54%), Gaps = 2/305 (0%)
Query: 47 LDTGRQVHSLAMKNGLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVT 105
L T + + + ++ LL V + +L++ Y+ GS+ DA + F+ + ++ + M++
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 106 GYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL 165
GY Q E++LR F MH G +E + VI+ACS L A + + +++K+G+
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
V S+L+D+++K DA + F +V W +II G ++N ++ +L+ +M
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
+ P+ T +SVL AC+SL L GK + A +IK G +V V +A+ +YAKCG +
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMA 302
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+ +F R+P V+SW M+SG +++ ALE+F +M G + + T +++SAC
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 346 HMGLV 350
+V
Sbjct: 363 RPSMV 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 244 SSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISW 302
S L L K + A +++ Y +V + +L + Y+ GS+ D +F +P DV+S
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 303 NAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG-----------LVD 351
N MISG Q+ ++L F KM G + + +++ +++SACS + +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 352 RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
G+ +++++ + ++D+ S+ + +A + + + C I+ G
Sbjct: 179 MGYFFYEVVE------------SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGA 226
Query: 412 CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKAR 465
RN + E + P+S Y SS+ A E + ++++AR
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTY---SSVLAACASLEKLRF-GKVVQAR 276
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 262/443 (59%), Gaps = 1/443 (0%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
Q H+ +K GL S V N+L++ Y+ G D A R F+ + +K+ +TW+AM+ G+ ++G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG-FGLQLYVL 170
+ +A+ F M +GV +E T+V V+ A + + GR +HG L+ G +++
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
SSLVDMY KC DA++ F+ + +VV WT++I GYVQ+ F+ + ++ +M +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
PNE T++SVL AC+ + AL +G+++H +IK + G+ L +Y KCG L++ L+
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F R+ ++V +W AMI+G + +G+ A +LF ML P+ VTF+ +LSAC+H GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 351 DRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+ G F M F++ P +HYACMVD+ R G L EAK IE ++ +W L G
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 411 GCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
C H++Y++G YA ++++L S Y LL+++Y+ W++V VR+ MK + V K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 471 PGCSWIELKSLVHVFVVGDSMHP 493
PG SWIE+K + F+ D P
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKP 566
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 168/311 (54%), Gaps = 8/311 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ G+ G A EA+ F +M+ + NE + S+L + E + GR VH L ++
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMK-KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET 233
Query: 61 GLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G + V + ++LV +Y KC DDA + F+ ++N +TW+A++ GY QS +K + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M S V P+E TL V++AC+ + A+ GR++H Y +K + ++L+D+Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG L +A FE + + +V WT++I G+ +G A +L+ M + PNE+T +V
Sbjct: 354 CGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAV 413
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM---YAKCGSLDDGYLIFWRMPT 296
L AC+ +++G+++ +K FN+E P + M + + G L++ + RMP
Sbjct: 414 LSACAHGGLVEEGRRLFLS-MKGRFNME-PKADHYACMVDLFGRKGLLEEAKALIERMPM 471
Query: 297 RDV-ISWNAMI 306
+ W A+
Sbjct: 472 EPTNVVWGALF 482
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 7/236 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY + + +FE+M + + NE L+S+LS L GR+VH +KN
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEM-LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN 335
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ + L+ LY KCG L++A+ FE KN TW+AM+ G+A G + A LF
Sbjct: 336 SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF 395
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV--LSSLVDMYA 178
++M S V P+E T + V++AC+ + EGR++ S+K F ++ + +VD++
Sbjct: 396 YTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDLFG 454
Query: 179 KCGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
+ G L +A+ E + +P V+W ++ + + D+E L Y ++ ++ P+
Sbjct: 455 RKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE--LGKYAASRVIKLQPSH 508
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 300/545 (55%), Gaps = 12/545 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGE-NEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
M+ G+++ G ++ QM E+ + +E + + + FL + +++H ++K
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ VANA V YAKCGSL A R F +K +W+A++ G+AQS D +L
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M SG+LP FT+ +++ACS L ++ G+++HG+ ++ L+V S++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG L + F+ ++ +V W ++ITGY+QNG + AL ++ +M + I ++M V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
ACS L +L G++ HA +K+ + + +L MYAK GS+ +F + +
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
SWNAMI G +G +A++LF++M G PD +TF+ +L+AC+H GL+ G Y
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE---SAEVDHGLCLWRILLGGCRNHR 416
M F + P ++HYAC++D+L RAG+L++A + S E D G +W+ LL CR H+
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG--IWKSLLSSCRIHQ 781
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
N ++G KL EL + YVLLS++Y LG+WEDV VR+ M + K+ GCSWI
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEG 536
EL V FVVG+ +EI+S +L + GY+ P++ + DL ++E
Sbjct: 842 ELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYR------PDTMSVQHDLSEEEK 895
Query: 537 SHEIQ 541
+++
Sbjct: 896 IEQLR 900
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 187/370 (50%), Gaps = 16/370 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++S Y+ L E +E F +M + + F ++ + G VH L +K
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL+ V V NALV+ Y G + DAL+ F+ +N ++W++M+ ++ +G SE++ L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 121 HSMHCS----GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
M +P TLV V+ C+ I G+ +HG+++KL +L + ++L+DM
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI--ERIIPNEL 234
Y+KCG + +A+ F+ +VV W +++ G+ GD G ++ +M E + +E+
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
T+ + + C + L K++H +K F V +A A YAKCGSL +F +
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM------- 347
++ V SWNA+I G +Q+ +L+ +M + G PD+ T +LLSACS +
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 348 ---GLVDRGW 354
G + R W
Sbjct: 517 EVHGFIIRNW 526
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 179/358 (50%), Gaps = 13/358 (3%)
Query: 2 LSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTS-----ILSDLNRTEFLDTGRQVHSL 56
+S + G ++ ++ ++E + F+L +L + + ++ GR++H L
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 57 AMKNGLLSIVSV-ANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEK 115
+ L V ++T+YA CGS DD+ F+ +KN W+A+++ Y+++ ++
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 116 ALRLFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
L F M + +LP FT VI AC+ + + G +HG +K G ++V ++LV
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER----II 230
Y G + DA + F+ + + ++V W S+I + NG E + L G+M E +
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
P+ T+ +VL C+ + GK +H +K + E+ + +AL MY+KCG + + +I
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLL--EGTKPDTVTFVNLLSACSH 346
F ++V+SWN M+ G S G + ++ +ML E K D VT +N + C H
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 17/251 (6%)
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-QIERI 229
+ ++ MYA CGS D+R F+ ++ ++ W ++I+ Y +N ++ L + +M +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
+P+ T V+KAC+ ++ + G +H ++K G +V VG+AL + Y G + D
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTK----PDTVTFVNLLSACS 345
+F MP R+++SWN+MI S NG ++ L +M+ E PD T V +L C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 346 H-----MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH 400
+G GW + E + ++D+ S+ G + A + I +
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNA------LMDMYSKCGCITNA-QMIFKMNNNK 356
Query: 401 GLCLWRILLGG 411
+ W ++GG
Sbjct: 357 NVVSWNTMVGG 367
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 276/507 (54%), Gaps = 4/507 (0%)
Query: 10 LAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA 69
L E+I L+ M + F IL +G+Q+H K G + V
Sbjct: 33 LFSESISLYRSM-LRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVL 91
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKN--SITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
AL+++Y KCG + DA + FE + + S+ ++A+++GY + A +F M +G
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR 187
V T++G++ C+ + GR +HG +K G ++ VL+S + MY KCGS+ R
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 188 RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA 247
R F+ + ++ W ++I+GY QNG L LY +M+ + P+ T+ SVL +C+ L
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
A G ++ + GF V V +A +MYA+CG+L +F MP + ++SW AMI
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
+G G L LFD M+ G +PD FV +LSACSH GL D+G + F+ M E+ +
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 391
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
P EHY+C+VD+L RAG+L+EA EFIES V+ +W LLG C+ H+N D+ A K
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK 451
Query: 428 LMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVV 487
++E YVL+S+IY+ E + +R MM+ R K+PG S++E K VH+F+
Sbjct: 452 VIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLA 511
Query: 488 GDSMHPQIDEIRSEL-RLLTKLMKDEG 513
GD H Q +E+ L L T +M+ G
Sbjct: 512 GDRSHEQTEEVHRMLDELETSVMELAG 538
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 194/380 (51%), Gaps = 8/380 (2%)
Query: 97 SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG 156
S W+ + A +++ L+ SM SG P F+ ++ +C+ L V G+Q+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 157 YSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD--VVLWTSIITGYVQNGDF 214
+ K G + +VL++L+ MY KCG +ADAR+ FE Q V + ++I+GY N
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
A ++ +M+ + + +TM ++ C+ L G+ +H +K G + EV V ++
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 275 SAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
MY KCGS++ G +F MP + +I+WNA+ISG SQNG LEL+++M G PD
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 335 VTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
T V++LS+C+H+G G + K++ P V + + +R G L +A+ +
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 395 SAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG-SPESSAYVLLSSIYTALGQWE 453
V L W ++G H +IG + +++ G P+ + +V++ S + G +
Sbjct: 317 IMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 454 D-VELVRRMMKARGVAKEPG 472
+EL R M R EPG
Sbjct: 376 KGLELFRAM--KREYKLEPG 393
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGY+ GLA + +EL+EQM+ + F L S+LS G +V L N
Sbjct: 228 VISGYSQNGLAYDVLELYEQMK-SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN 286
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V V+NA +++YA+CG+L A F+ K+ ++W+AM+ Y G E L LF
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH---GYSLKLGFGLQLYVLSSLVDMY 177
M G+ P V V++ACS +G ++ KL G + Y S LVD+
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY--SCLVDLL 404
Query: 178 AKCGSLADARRGFEYVQ-QPDVVLWTSII 205
+ G L +A E + +PD +W +++
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALL 433
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 292/520 (56%), Gaps = 33/520 (6%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
N + +L +++ G+Q+H +K G + V +L+++Y + G L+DA + F
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 90 EFSGN-------------------------------KNSITWSAMVTGYAQSGDSEKALR 118
+ S + K+ ++W+AM++GYA++G+ ++AL
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M + V P E T+V V++AC+ +I GRQ+H + GFG L ++++L+D+Y+
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG L A FE + DV+ W ++I GY ++ AL L+ +M PN++TM S
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 239 VLKACSSLAALDQGKQMHAGIIKY--GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
+L AC+ L A+D G+ +H I K G + ++L MYAKCG ++ + +F +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
+ + SWNAMI G + +G + + +LF +M G +PD +TFV LLSACSH G++D G
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
F+ M+ ++ +TP +EHY CM+D+L +G EA+E I E++ +W LL C+ H
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG 552
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
N ++G E L+++ +YVLLS+IY + G+W +V R ++ +G+ K PGCS I
Sbjct: 553 NVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
E+ S+VH F++GD HP+ EI L + L++ G+ P
Sbjct: 613 EIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVP 652
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 223/444 (50%), Gaps = 38/444 (8%)
Query: 38 LSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALV---TLYAKCGSLDDALRTFEFSGN 94
LS L+ + L + R +H+ +K GL + + L+ L L A+ F+
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
N + W+ M G+A S D AL+L+ M G+LP+ +T V+ +C+ A EG+Q+
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE---------------------YV 193
HG+ LKLG L LYV +SL+ MY + G L DA + F+ Y+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 194 QQ----------PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKAC 243
+ DVV W ++I+GY + G+++ AL L+ M + P+E TM +V+ AC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 244 SSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWN 303
+ +++ G+Q+H I +GF + + +AL +Y+KCG L+ +F R+P +DVISWN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 304 AMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG-WDYFKMMSD 362
+I G + +AL LF +ML G P+ VT +++L AC+H+G +D G W + +
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 363 EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGA 422
+T ++D+ ++ G + A + S + L W ++ G H D
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASF 455
Query: 423 YAGEKLMELG-SPESSAYV-LLSS 444
++ ++G P+ +V LLS+
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSA 479
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 143/257 (55%), Gaps = 3/257 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGYA G KEA+ELF+ M + +E + +++S ++ ++ GRQVH +
Sbjct: 237 MISGYAETGNYKEALELFKDMM-KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDH 295
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S + + NAL+ LY+KCG L+ A FE K+ I+W+ ++ GY ++AL LF
Sbjct: 296 GFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL--GFGLQLYVLSSLVDMYA 178
M SG P++ T++ ++ AC+ L AI GR +H Y K G + +SL+DMYA
Sbjct: 356 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG + A + F + + W ++I G+ +G + + +L+ +M+ I P+++T
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 239 VLKACSSLAALDQGKQM 255
+L ACS LD G+ +
Sbjct: 476 LLSACSHSGMLDLGRHI 492
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 269/484 (55%), Gaps = 5/484 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY G +A+ +F+ M E + + S+L + L+ GR VH L +
Sbjct: 189 MISGYYRNGYMNDALMMFDWM-VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L + V NALV +Y KCG +D+A F+ ++ ITW+ M+ GY + GD E AL L
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M GV P+ T+ +++ C D + +G+ +HG++++ + + +SL+ MYAKC
Sbjct: 308 RLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC 367
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ R F + W++II G VQN AL L+ +M+ E + PN T+ S+L
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLL 427
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF----WRMPT 296
A ++LA L Q +H + K GF + + L +Y+KCG+L+ + IF + +
Sbjct: 428 PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
+DV+ W A+ISG +G G+ AL++F +M+ G P+ +TF + L+ACSH GLV+ G
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
F+ M + + HY C+VD+L RAG+L+EA I + + +W LL C H
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE 607
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
N +G A KL EL + YVLL++IY ALG+W+D+E VR MM+ G+ K+PG S I
Sbjct: 608 NVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Query: 477 ELKS 480
E++S
Sbjct: 668 EIRS 671
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 203/415 (48%), Gaps = 13/415 (3%)
Query: 5 YASLGLAKEAIELFEQM-----RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
Y GL +AI +F +M +C + FV + + + G VH ++
Sbjct: 90 YVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA----GELKSMKLGLVVHGRILR 145
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ V NAL+ +Y G ++ A F+ N++ I+W+ M++GY ++G AL +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M V T+V ++ C L + GR +H + G ++ V ++LV+MY K
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG + +AR F+ +++ DV+ WT +I GY ++GD E AL L MQ E + PN +T+AS+
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASL 325
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ C ++ GK +H ++ ++ + ++L +MYAKC +D + +F
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
W+A+I+G QN + AL LF +M E +P+ T +LL A + + + + +
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG---LCLWRILLGG 411
++ + +++ +V + S+ G L A + + H + LW L+ G
Sbjct: 446 LT-KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 4/246 (1%)
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
++LS+L YA CG + AR+ FE + Q ++ + +I YV+ G + A++++ +M E
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 228 --RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
+ +P+ T V KA L ++ G +H I++ F + V +AL AMY G ++
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+F M RDVISWN MISG +NG+ N AL +FD M+ E D T V++L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 346 HMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLW 405
H+ ++ G + K++ +E + +E +V++ + G+++EA+ + E + W
Sbjct: 230 HLKDLEMGRNVHKLV-EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW 287
Query: 406 RILLGG 411
++ G
Sbjct: 288 TCMING 293
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 181/515 (35%), Positives = 282/515 (54%), Gaps = 13/515 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGEN--EFVLTSILSD--LNRTE-FLDTGRQVHS 55
++SGY +G A+E + L +M +G N + L S+L +N E F++ G +H
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMH---RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD--- 112
K G+ + V AL+ +YAK GSL +A++ F +KN +T++AM++G+ Q +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 113 --SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
S +A +LF M G+ PS T V+ ACS + GRQ+H K F ++
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
S+L+++YA GS D + F + D+ WTS+I +VQN E A +L+ ++ I
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
P E T++ ++ AC+ AAL G+Q+ IK G + V ++ +MYAK G++ +
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F + DV +++AMIS L+Q+G N+AL +F+ M G KP+ F+ +L AC H GLV
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 351 DRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+G YF+ M +++ I P +H+ C+VD+L R G+L++A+ I S+ WR LL
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 411 GCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
CR +++ IG E+LMEL S +YVLL +IY G E VR +M+ RGV KE
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 471 PGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLL 505
P SWI + + H F V D HP I + L +
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 218/440 (49%), Gaps = 40/440 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGY +G ++A+ELF + R E ++F L LD G +H L + N
Sbjct: 119 LISGYTQMGFYEQAMELFLEAR-EANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL V + N L+ +Y+KCG LD A+ F+ ++ ++W+++++GY + G +E+ L L
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 121 HSMHCSGVLPSEFTLVGVINACS---DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
MH G+ + + L V+ AC + I +G +H Y+ KLG + V ++L+DMY
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEG-----ALNLYGKMQIERIIPN 232
AK GSL +A + F + +VV + ++I+G++Q + A L+ MQ + P+
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
T + VLKACS+ L+ G+Q+HA I K F + +GSAL +YA GS +DG F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG---- 348
+D+ SW +MI QN A +LF ++ +P+ T ++SAC+
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 349 -------LVDRGWDYFKM----------------MSDEFDI---TPTVEHYACMVDILSR 382
+ G D F ++++ I P V Y+ M+ L++
Sbjct: 478 GEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQ 537
Query: 383 AGKLNEAKEFIESAEVDHGL 402
G NEA ES + HG+
Sbjct: 538 HGSANEALNIFESMKT-HGI 556
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 179/341 (52%), Gaps = 14/341 (4%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G+ H +K+ L + + N L+ +Y KC L A + F+ +N I+++++++GY Q
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
G E+A+ LF + + +FT G + C + C + G +HG + G Q+++
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
++ L+DMY+KCG L A F+ + D V W S+I+GYV+ G E LNL KM + +
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 230 IPNELTMASVLKACS---SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
+ SVLKAC + +++G +H K G ++ V +AL MYAK GSL +
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQ-----NGHGNKALELFDKMLLEGTKPDTVTFVNLL 341
+F MP+++V+++NAMISG Q + ++A +LF M G +P TF +L
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 342 SACSHMGLVDRGWDYFKMM------SDEFDITPTVEHYACM 376
ACS ++ G ++ SDEF + +E YA M
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 10/249 (4%)
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
++V G+ HG+ +K LY+L++L++MY KC L AR+ F+ + + +++ + S+I+
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
GY Q G +E A+ L+ + + + ++ T A L C LD G+ +H ++ G +
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
+V + + L MY+KCG LD +F R RD +SWN++ISG + G + L L KM
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 327 LEGTKPDTVTFVNLLSACS---HMGLVDRGWD---YFKMMSDEFDITPTVEHYACMVDIL 380
+G T ++L AC + G +++G Y + EFDI ++D+
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT----ALLDMY 297
Query: 381 SRAGKLNEA 389
++ G L EA
Sbjct: 298 AKNGSLKEA 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ 311
GK H +IK N + + + L MY KC L +F RMP R++IS+N++ISG +Q
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 312 NGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
G +A+ELF + K D T+ L C +D G + + ++ V
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVF 184
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
++D+ S+ GKL++A + + + W L+ G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 303/551 (54%), Gaps = 9/551 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQM-RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
M+SGY +LG ++ LF++M +C + + F S L + G+++H A++
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKP--DRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 60 NGLLS-IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
+ + + V V +++ +Y+K G + A R F +N + W+ M+ YA++G A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 119 LFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
F M +G+ P T + ++ A AI+EGR +HGY+++ GF + + ++L+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
+CG L A F+ + + +V+ W SII YVQNG AL L+ ++ ++P+ T+A
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
S+L A + +L +G+++HA I+K + + ++L MYA CG L+D F + +
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
DV+SWN++I + +G G ++ LF +M+ P+ TF +LL+ACS G+VD GW+YF
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
+ M E+ I P +EHY CM+D++ R G + AK F+E +W LL RNH++
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
I +A E++ ++ + YVLL ++Y G+WEDV ++ +M+++G+++ S +E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 478 LKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGS 537
K HVF GD H ++I L ++++++ +E H S ET +
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRR 735
Query: 538 HEIQLRVCGGV 548
H ++L C G+
Sbjct: 736 HSVRLATCFGL 746
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 190/345 (55%), Gaps = 7/345 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ G+ S GL EA++ + +M + + F ++ + L+ G+++H++ +K
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADT-FTYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +S V V N+L++LY K G DA + FE ++ ++W++M++GY GD +L LF
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL-QLYVLSSLVDMYAK 179
M G P F+ + + ACS + + G+++H ++++ + V++S++DMY+K
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK 279
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER-IIPNELTMAS 238
G ++ A R F + Q ++V W +I Y +NG A + KM + + P+ +T +
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSIN 339
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+L A +A+ +G+ +H ++ GF + + +AL MY +CG L +IF RM ++
Sbjct: 340 LLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
VISWN++I+ QNG ALELF ++ PD+ T ++L A
Sbjct: 396 VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 208/424 (49%), Gaps = 26/424 (6%)
Query: 76 YAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTL 135
+A ++DAL+ F+ ++ W+ M+ G+ G +A++ + M +GV FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 136 VGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ 195
VI + + + ++ EG+++H +KLGF +YV +SL+ +Y K G DA + FE + +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
D+V W S+I+GY+ GD +L L+ +M P+ + S L ACS + + GK++
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 256 HAGIIKYGFNL-EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGH 314
H ++ +V V +++ MY+K G + IF M R++++WN MI ++NG
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 315 GNKALELFDKMLLE-GTKPDTVTFVNLLSACSHM-GLVDRGWDYFKMMSDEFDITPTVEH 372
A F KM + G +PD +T +NLL A + + G G+ M F P +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGY----AMRRGF--LPHMVL 367
Query: 373 YACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR-ILLGGCRNHRNYDIGAYAGEKLMEL 431
++D+ G+L A E I + + W I+ +N +NY A E EL
Sbjct: 368 ETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNGKNYS----ALELFQEL 422
Query: 432 GS----PESSAYV-LLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFV 486
P+S+ +L + +L E E+ ++K+R + I L SLVH++
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT-----IILNSLVHMYA 477
Query: 487 V-GD 489
+ GD
Sbjct: 478 MCGD 481
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 297/587 (50%), Gaps = 73/587 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
ML+ Y+ LGL +EAI LF Q+R + + +++ T+ILS + GR++ SL +++
Sbjct: 41 MLTSYSRLGLHQEAIALFTQLRFSDAK-PDDYSFTAILSTCASLGNVKFGRKIQSLVIRS 99
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE--FSGNKNSITWSA---------------- 102
G + + V N+L+ +Y KC A + F ++N +TW +
Sbjct: 100 GFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALD 159
Query: 103 ---------------MVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS-DLC 146
M++G+A G E L LF M S P +T ++NACS D
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ------------ 194
+V GR +H LK G+ + +S++ Y K GS DA R E ++
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 195 -------------------QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
+ ++V WT++ITGY +NGD E AL + +M + +
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+VL ACS LA L GK +H +I GF VG+AL +YAKCG + + F +
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA 399
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
+D++SWN M+ +G ++AL+L+D M+ G KPD VTF+ LL+ CSH GLV+ G
Sbjct: 400 NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM 459
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV----DHGLCLWRILLGG 411
F+ M ++ I V+H CM+D+ R G L EAK+ + W LLG
Sbjct: 460 IFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
Query: 412 CRNHRNYDIGAYAGEKLMELGSP-ESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
C H + ++G K++++ P E ++VLLS++Y + G+W++ E VRR M RG+ K
Sbjct: 520 CSTHWHTELGREV-SKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKT 578
Query: 471 PGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKD-EGYQP 516
PGCSWIE+ + V FVVGDS HP+++E+ L L M++ E + P
Sbjct: 579 PGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRNPETFGP 625
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 77/417 (18%)
Query: 63 LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHS 122
+S++ + + AK G + A + F+ +++ W+ M+T Y++ G ++A+ LF
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 123 MHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS 182
+ S P +++ +++ C+ L + GR++ ++ GF L V +SL+DMY KC
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 183 LADARRGFE-------------------------------YVQQPDVV--LWTSIITGYV 209
A + F +V+ P V W +I+G+
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA-LDQGKQMHAGIIKYGFNLEV 268
G E L+L+ +M P+ T +S++ ACS+ ++ + G+ +HA ++K G++ V
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 269 PVGSALSAMYAKCGSLDDGYL-------------------------------IFWRMPTR 297
+++ + Y K GS DD +F P +
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
++++W MI+G +NG G +AL F +M+ G D + +L ACS + L+ G
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG---- 356
Query: 358 KMMSDEFDITPTVEHYA----CMVDILSRAGKLNEA-KEFIESAEVDHGLCLWRILL 409
KM+ I + YA +V++ ++ G + EA + F + A D L W +L
Sbjct: 357 KMIHGCL-IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD--LVSWNTML 410
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 278/511 (54%), Gaps = 2/511 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++S + G A++A+ELF +M E N LT +S +R +L+ G+++H +K
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFE-PNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V +ALV +Y KC L+ A F+ K+ + W++M+ GY GDS+ + +
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M G PS+ TL ++ ACS ++ G+ +HGY ++ +YV SL+D+Y KC
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G A F Q+ W +I+ Y+ G++ A+ +Y +M + P+ +T SVL
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
ACS LAAL++GKQ+H I + + + SAL MY+KCG+ + + IF +P +DV+
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SW MIS +G +AL FD+M G KPD VT + +LSAC H GL+D G +F M
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFI-ESAEVDHGLCLWRILLGGCRNHRNYD 419
++ I P +EHY+CM+DIL RAG+L EA E I ++ E L L C H +
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+G L+E ++S Y++L ++Y + W+ VR MK G+ K+PGCSWIE+
Sbjct: 598 LGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
V F D H + + + L LL+ M+
Sbjct: 658 DKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 242/455 (53%), Gaps = 12/455 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSD---LNRTEFLDTGRQVHSLA 57
++SGY+ + + +E+F+++ + F +++ L R EFL GR +H+L
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR-EFL--GRMIHTLV 133
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
+K+G + V VA++LV +YAK +++L+ F+ ++ +W+ +++ + QSG++EKAL
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
LF M SG P+ +L I+ACS L + G+++H +K GF L YV S+LVDMY
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
KC L AR F+ + + +V W S+I GYV GD + + + +M IE P++ T+
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
S+L ACS L GK +H +I+ N ++ V +L +Y KCG + +F +
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
SWN MIS G+ KA+E++D+M+ G KPD VTF ++L ACS + +++G
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
+S+ T + A ++D+ S+ G EA S + W +++ +H
Sbjct: 434 LSISESRLETDELLLSA-LLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Query: 418 YDIGAYAGEKLMELG-SPESSAYVLLSSIYTALGQ 451
Y +++ + G P+ V L ++ +A G
Sbjct: 492 PREALYQFDEMQKFGLKPDG---VTLLAVLSACGH 523
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 165/307 (53%), Gaps = 2/307 (0%)
Query: 42 NRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNKNSITW 100
N T+ L + VH + GL V + +L+ +Y C A FE F + W
Sbjct: 15 NSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIW 74
Query: 101 SAMVTGYAQSGDSEKALRLFHS-MHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL 159
+++++GY+++ L +F ++CS +P FT VI A L GR +H +
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134
Query: 160 KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALN 219
K G+ + V SSLV MYAK ++ + F+ + + DV W ++I+ + Q+G+ E AL
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194
Query: 220 LYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
L+G+M+ PN +++ + ACS L L++GK++H +K GF L+ V SAL MY
Sbjct: 195 LFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYG 254
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
KC L+ +F +MP + +++WN+MI G G +E+ ++M++EGT+P T +
Sbjct: 255 KCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTS 314
Query: 340 LLSACSH 346
+L ACS
Sbjct: 315 ILMACSR 321
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 6/263 (2%)
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE-YVQQPDVVLWTSIITGYVQ 210
+ +H L LG + + SL+++Y C AR FE + + DV +W S+++GY +
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 211 NGDFEGALNLYGK-MQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP 269
N F L ++ + + +P+ T +V+KA +L G+ +H ++K G+ +V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
V S+L MYAK ++ +F MP RDV SWN +IS Q+G KALELF +M G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
+P++V+ +SACS + ++RG + + K + F++ V + +VD+ + L
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEV 261
Query: 389 AKEFIESAEVDHGLCLWRILLGG 411
A+E + L W ++ G
Sbjct: 262 AREVFQKMP-RKSLVAWNSMIKG 283
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 281/525 (53%), Gaps = 34/525 (6%)
Query: 31 EFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLD---DALR 87
E L +S L R + +Q+H+ +K GL+ ++ S D A
Sbjct: 11 EHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI 70
Query: 88 TFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCA 147
F+ ++ W+ M+ G++ S + E++L L+ M CS + +T ++ ACS+L A
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 148 IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITG 207
E Q+H KLG+ +Y ++SL++ YA G+ A F+ + +PD V W S+I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 208 YVQNGDFEGALNLYGKM-------------------------------QIERIIPNELTM 236
YV+ G + AL L+ KM Q + P+ +++
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
A+ L AC+ L AL+QGK +H+ + K ++ +G L MYAKCG +++ +F +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
+ V +W A+ISG + +GHG +A+ F +M G KP+ +TF +L+ACS+ GLV+ G
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
F M ++++ PT+EHY C+VD+L RAG L+EAK FI+ + +W LL CR H+
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
N ++G GE L+ + YV ++I+ +W+ RR+MK +GVAK PGCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSL 521
L+ H F+ GD HP+I++I+S+ R++ + +++ GY P L+ +
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEM 535
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 160/341 (46%), Gaps = 34/341 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ G++ + ++ L+++M C N + S+L + + Q+H+ K
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAP-HNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 61 GLLSIVSVANALVTLYA-------------------------------KCGSLDDALRTF 89
G + V N+L+ YA K G +D AL F
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
KN+I+W+ M++GY Q+ +++AL+LFH M S V P +L ++AC+ L A+
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
+G+ +H Y K + + L+DMYAKCG + +A F+ +++ V WT++I+GY
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK-YGFNLEV 268
+G A++ + +MQ I PN +T +VL ACS +++GK + + + Y +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISG 308
+ + + G LD+ MP + + + W A++
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 273/488 (55%), Gaps = 5/488 (1%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
++F + + E + GR VHS K GL V + ++L+ +YAKCG + A + F
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ +++++W++M++GY+++G ++ A+ LF M G P E TLV ++ ACS L +
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR 250
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
GR + ++ GL ++ S L+ MY KCG L ARR F + + D V WT++IT Y
Sbjct: 251 TGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP 269
QNG A L+ +M+ + P+ T+++VL AC S+ AL+ GKQ+ + +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
V + L MY KCG +++ +F MP ++ +WNAMI+ + GH +AL LFD+M
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---S 427
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
P +TF+ +LSAC H GLV +G YF MS F + P +EHY ++D+LSRAG L+EA
Sbjct: 428 VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 390 KEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSA-YVLLSSIYTA 448
EF+E + +LG C ++ I A LME+ +++ YV+ S++
Sbjct: 488 WEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLAD 547
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVG-DSMHPQIDEIRSELRLLTK 507
+ W++ +R +M+ RGV K PGCSWIE++ + F+ G D + ++ S LL +
Sbjct: 548 MKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVE 607
Query: 508 LMKDEGYQ 515
MK E Y+
Sbjct: 608 EMKRERYE 615
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 194/384 (50%), Gaps = 13/384 (3%)
Query: 18 FEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYA 77
FE+ R + E + F+L +S ++ RQ+ + LL V N L+
Sbjct: 28 FEEARRGDLERDFLFLLKKCIS-------VNQLRQIQA----QMLLHSVEKPNFLIPKAV 76
Query: 78 KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS-GDSEKALRLFHSMHCSGVLPSEFTLV 136
+ G + + F + N +++ M+ G + D E AL L+ M SG+ P +FT
Sbjct: 77 ELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYN 136
Query: 137 GVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP 196
V AC+ L I GR +H K+G +++ SL+ MYAKCG + AR+ F+ + +
Sbjct: 137 FVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER 196
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
D V W S+I+GY + G + A++L+ KM+ E P+E T+ S+L ACS L L G+ +
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLE 256
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGN 316
I L +GS L +MY KCG LD +F +M +D ++W AMI+ SQNG +
Sbjct: 257 EMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 317 KALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACM 376
+A +LF +M G PD T +LSAC +G ++ G + + E + + +
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATGL 375
Query: 377 VDILSRAGKLNEAKEFIESAEVDH 400
VD+ + G++ EA E+ V +
Sbjct: 376 VDMYGKCGRVEEALRVFEAMPVKN 399
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 9/300 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
M+SGY+ G AK+A++LF +M EEEG +E L S+L + L TGR + +A+
Sbjct: 204 MISGYSEAGYAKDAMDLFRKM---EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
+ + + L+++Y KCG LD A R F K+ + W+AM+T Y+Q+G S +A +
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M +GV P TL V++AC + A+ G+Q+ ++ +L +YV + LVDMY
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG + +A R FE + + W ++IT Y G + AL L+ +M + P+++T
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIG 437
Query: 239 VLKACSSLAALDQG-KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
VL AC + QG + H +G ++ + + + ++ G LD+ + R P +
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 284/521 (54%), Gaps = 1/521 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++S Y G +++++L MR N T++ + + F D + VH +K
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF-DFAKGVHGQILKT 276
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ V L+ LY + G + DA + F + + WS M+ + Q+G +A+ LF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + V+P+EFTL ++N C+ G Q+HG +K+GF L +YV ++L+D+YAKC
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ A + F + + V W ++I GY G+ A +++ + ++ E+T +S L
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSAL 456
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC+SLA++D G Q+H IK +V V ++L MYAKCG + +F M T DV
Sbjct: 457 GACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA 516
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SWNA+ISG S +G G +AL + D M KP+ +TF+ +LS CS+ GL+D+G + F+ M
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
+ I P +EHY CMV +L R+G+L++A + IE + + +WR +L N N +
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
+ E+++++ + + YVL+S++Y QW +V +R+ MK GV KEPG SWIE +
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSL 521
VH F VG S HP + I L L GY P +++
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAV 737
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 214/442 (48%), Gaps = 30/442 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQM---------------RCEE---------EEGE--NEFVL 34
+L+ Y G K+A+ LF++M C++ EG N V
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVF 149
Query: 35 TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGN 94
TS L + + +HS +K G S V AL+ Y+ CGS+D A FE
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
K+ + W+ +V+ Y ++G E +L+L M +G +P+ +T + A L A + +
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG LK + L V L+ +Y + G ++DA + F + + DVV W+ +I + QNG
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC 329
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
A++L+ +M+ ++PNE T++S+L C+ G+Q+H ++K GF+L++ V +AL
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 275 SAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
+YAKC +D +F + +++ +SWN +I G G G KA +F + L
Sbjct: 390 IDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE 449
Query: 335 VTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE-FI 393
VTF + L AC+ + +D G ++ + + V ++D+ ++ G + A+ F
Sbjct: 450 VTFSSALGACASLASMDLGVQVHG-LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 394 ESAEVDHGLCLWRILLGGCRNH 415
E +D + W L+ G H
Sbjct: 509 EMETID--VASWNALISGYSTH 528
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 8/299 (2%)
Query: 49 TGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYA 108
+ + +H +K G + N L+ Y K G DAL F+ +N++++ + GYA
Sbjct: 67 SAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126
Query: 109 QSGDSEKALRLFHSMHCSG--VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
+ + L+ +H G + P FT + D I +H +KLG+
Sbjct: 127 ----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP--WLHSPIVKLGYDSN 180
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
+V ++L++ Y+ CGS+ AR FE + D+V+W I++ YV+NG FE +L L M++
Sbjct: 181 AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM 240
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
+PN T + LKA L A D K +H I+K + L+ VG L +Y + G + D
Sbjct: 241 AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSD 300
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+ +F MP DV+ W+ MI+ QNG N+A++LF +M P+ T ++L+ C+
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
+ + +H LK G L L+ + L++ Y K G DA F+ + + + V + ++ GY
Sbjct: 66 ISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY 125
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
+ + LY ++ E N S LK SL + +H+ I+K G++
Sbjct: 126 A----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
VG+AL Y+ CGS+D +F + +D++ W ++S +NG+ +L+L M +
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 329 GTKPDTVTFVNLLSACSHMGLVD 351
G P+ TF L A +G D
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFD 264
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 286/514 (55%), Gaps = 3/514 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ YA A++LF MR ++ + F L++++S + + G+ VH+ K
Sbjct: 344 MVAAYAENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ S ++ +AL+TLY+KCG DA F+ K+ + W ++++G ++G ++AL++F
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 121 HSMHCS--GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
M + P + V NAC+ L A+ G Q+HG +K G L ++V SSL+D+Y+
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYS 522
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG A + F + ++V W S+I+ Y +N E +++L+ M + I P+ +++ S
Sbjct: 523 KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITS 582
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL A SS A+L +GK +H ++ G + + +AL MY KCG IF +M +
Sbjct: 583 VLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS 642
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+I+WN MI G +G AL LFD+M G PD VTF++L+SAC+H G V+ G + F+
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 702
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M ++ I P +EHYA MVD+L RAG L EA FI++ ++ +W LL R H N
Sbjct: 703 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
++G + EKL+ + S YV L ++Y G + + +MK +G+ K+PGCSWIE+
Sbjct: 763 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE 512
+VF G S P EI + L L M DE
Sbjct: 823 SDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 180/354 (50%), Gaps = 14/354 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILS------DLNRTEFLDTGRQVH 54
M+ GY KE + F +M + F L+ ++S + R E G+Q+H
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVR-PDAFSLSIVVSVMCKEGNFRREE----GKQIH 193
Query: 55 SLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDS 113
++N L + + AL+ +Y K G DA R F E N + W+ M+ G+ SG
Sbjct: 194 GFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGIC 253
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL 173
E +L L+ + V + G + ACS GRQ+H +K+G YV +SL
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 174 VDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
+ MY+KCG + +A F V + +W +++ Y +N AL+L+G M+ + ++P+
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
T+++V+ CS L + GK +HA + K + SAL +Y+KCG D YL+F
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKML--LEGTKPDTVTFVNLLSACS 345
M +D+++W ++ISGL +NG +AL++F M + KPD+ ++ +AC+
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 212/421 (50%), Gaps = 25/421 (5%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
+A+ L+ + + F S+L + L G+ +H + G +A +L
Sbjct: 42 QALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSL 101
Query: 73 VTLYAKCGSLDDALRTFE-FSGNKNSIT------WSAMVTGYAQSGDSEKALRLFHSMHC 125
V +Y KCG LD A++ F+ +S +++ ++ W++M+ GY + ++ + F M
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV 161
Query: 126 SGVLPSEFTLVGVINACSDLCA-----IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
GV P F+L V+ S +C EG+Q+HG+ L+ ++ ++L+DMY K
Sbjct: 162 FGVRPDAFSLSIVV---SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 181 GSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLY--GKMQIERIIPNELTMA 237
G DA R F E + +VVLW +I G+ +G E +L+LY K +++ T A
Sbjct: 219 GLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGA 278
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
L ACS G+Q+H ++K G + + V ++L +MY+KCG + + +F + +
Sbjct: 279 --LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDK 336
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-Y 356
+ WNAM++ ++N +G AL+LF M + PD+ T N++S CS +GL + G +
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG-CRNH 415
++ T T+E + ++ + S+ G +A +S E + + W L+ G C+N
Sbjct: 397 AELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNG 453
Query: 416 R 416
+
Sbjct: 454 K 454
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%), Gaps = 19/317 (5%)
Query: 109 QSGDSEKALRLFHSMH--CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
Q G+ +AL L+ S H S S FT ++ ACS L + G+ +HG + LG+
Sbjct: 36 QKGEYLQALHLY-SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYD 94
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQP-------DVVLWTSIITGYVQNGDFEGALN 219
++ +SLV+MY KCG L A + F+ Q DV +W S+I GY + F+ +
Sbjct: 95 PFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154
Query: 220 LYGKMQIERIIPNELTMASVLKACSSLAAL--DQGKQMHAGIIKYGFNLEVPVGSALSAM 277
+ +M + + P+ +++ V+ ++GKQ+H +++ + + + +AL M
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 278 YAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVT 336
Y K G D + +F + + +V+ WN MI G +G +L+L+ K + +
Sbjct: 215 YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 337 FVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC--MVDILSRAGKLNEAKEFIE 394
F L ACS G ++ D + + Y C ++ + S+ G + EA E +
Sbjct: 275 FTGALGACSQSENSGFGR---QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA-ETVF 330
Query: 395 SAEVDHGLCLWRILLGG 411
S VD L +W ++
Sbjct: 331 SCVVDKRLEIWNAMVAA 347
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 13/218 (5%)
Query: 205 ITGYVQNGDFEGALNLYGKMQ-IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
I +Q G++ AL+LY K + T S+LKACS+L L GK +H ++ G
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIF--WR-----MPTRDVISWNAMISGLSQNGHGN 316
+ + + ++L MY KCG LD +F W + RDV WN+MI G +
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 317 KALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR---GWDYFKMMSDEFDITPTVEHY 373
+ + F +ML+ G +PD + ++S G R + M+ + D ++
Sbjct: 151 EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK-- 208
Query: 374 ACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
++D+ + G +A E + LW +++ G
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 292/533 (54%), Gaps = 6/533 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY G+ E +ELF MR + + LTS++S GR +H+ +
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVD-PDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +SV N+L +Y GS +A + F K+ ++W+ M++GY + +KA+ +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M V P E T+ V++AC+ L + G ++H ++K + V ++L++MY+KC
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ A F + + +V+ WTSII G N AL +M++ + PN +T+ + L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAAL 505
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC+ + AL GK++HA +++ G L+ + +AL MY +CG ++ + F +DV
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVT 564
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SWN +++G S+ G G+ +ELFD+M+ +PD +TF++LL CS +V +G YF M
Sbjct: 565 SWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM 624
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
D + +TP ++HYAC+VD+L RAG+L EA +FI+ V +W LL CR H D+
Sbjct: 625 ED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDL 683
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G + + + EL Y+LL ++Y G+W +V VRRMMK G+ + GCSW+E+K
Sbjct: 684 GELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP--HLDSLPESETTGDDL 531
VH F+ D HPQ EI + L + M + G S+ E+E + D++
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEI 796
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 198/360 (55%), Gaps = 4/360 (1%)
Query: 2 LSGYASLGLAKEAIELFEQMR-CEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
L G + G +EA++L M+ E+ FV L + R + + G +V+S+A+ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQ--EEGSKVYSIALSS 123
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
V + NA + ++ + G+L DA F +N +W+ +V GYA+ G ++A+ L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 121 HSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
H M GV P +T V+ C + + G+++H + ++ G+ L + V+++L+ MY K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG + AR F+ + + D++ W ++I+GY +NG L L+ M+ + P+ +T+ SV
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ AC L G+ +HA +I GF +++ V ++L+ MY GS + +F RM +D+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW MISG N +KA++ + M + KPD +T +LSAC+ +G +D G + K+
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 213/415 (51%), Gaps = 12/415 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYA G EA+ L+ +M + + +L L G++VH ++
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V NAL+T+Y KCG + A F+ ++ I+W+AM++GY ++G + L LF
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+M V P TL VI+AC L GR +H Y + GF + + V +SL MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
GS +A + F +++ D+V WT++I+GY N + A++ Y M + + P+E+T+A+VL
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC++L LD G ++H IK V V + L MY+KC +D IF +P ++VI
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD----Y 356
SW ++I+GL N +AL +F + + +P+ +T L+AC+ +G + G +
Sbjct: 466 SWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+ D P ++D+ R G++N A S + D + W ILL G
Sbjct: 525 LRTGVGLDDFLPNA-----LLDMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTG 572
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 283/533 (53%), Gaps = 54/533 (10%)
Query: 37 ILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCG----SLDDALRTFEFS 92
+ +N + Q+H++ +K+G + A ++ A LD A + F
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 93 GNKNSITWSAMVTGYAQSGDSEKAL---RLFHSMHCSG-VLPSEFTLVGVINACSDLCAI 148
+N +W+ ++ G+++S D +KAL LF+ M V P+ FT V+ AC+ I
Sbjct: 86 PQRNCFSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR--------------------- 187
EG+Q+HG +LK GFG +V+S+LV MY CG + DAR
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 188 ------------------------RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGK 223
F+ ++Q VV W ++I+GY NG F+ A+ ++ +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 224 MQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGS 283
M+ I PN +T+ SVL A S L +L+ G+ +H G ++ +GSAL MY+KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 284 LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
++ +F R+P +VI+W+AMI+G + +G A++ F KM G +P V ++NLL+A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 344 CSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC 403
CSH GLV+ G YF M + P +EHY CMVD+L R+G L+EA+EFI + +
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 404 LWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMK 463
+W+ LLG CR N ++G LM++ +S AYV LS++Y + G W +V +R MK
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 464 ARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
+ + K+PGCS I++ ++H FVV D HP+ EI S L ++ ++ GY+P
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 158/348 (45%), Gaps = 47/348 (13%)
Query: 14 AIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALV 73
AI LF +M +E N F S+L +T + G+Q+H LA+K G V + LV
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 74 TLYAKCGSLDDA------------------------------------LR---------T 88
+Y CG + DA +R
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
F+ ++ ++W+ M++GY+ +G + A+ +F M + P+ TLV V+ A S L ++
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
G +H Y+ G + + S+L+DMY+KCG + A FE + + +V+ W+++I G+
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY-GFNLE 267
+G A++ + KM+ + P+++ ++L ACS +++G++ + ++ G
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPR 410
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGH 314
+ + + + G LD+ MP + D + W A++ G+
Sbjct: 411 IEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 9/220 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY+ G K+A+E+F +M+ + + N L S+L ++R L+ G +H A +
Sbjct: 245 MISGYSLNGFFKDAVEVFREMK-KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ + +AL+ +Y+KCG ++ A+ FE +N ITWSAM+ G+A G + A+ F
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL-GFGLQLYVLSSLVDMYAK 179
M +GV PS+ + ++ ACS + EGR+ + + G ++ +VD+ +
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Query: 180 CGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFE 215
G L +A E++ +PD V+W +++ G+ E
Sbjct: 424 SGLLDEAE---EFILNMPIKPDDVIWKALLGACRMQGNVE 460
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 284/536 (52%), Gaps = 30/536 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSIL-SDLNRTEFLDTGRQVHSLAMK 59
MLSGYA G +A +F++M + + N + + S + L R+ +L
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 60 NGLL-------SIVSVA--------------NALVTLYAKCGSLDDALRTFEFSGNKNSI 98
N LL IV N ++T YA+ G +D+A + F+ S ++
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 99 TWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYS 158
TW+AMV+GY Q+ E+A LF M + L G + E +M
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG--------ERMEMAKEL 334
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGAL 218
+ + ++++ YA+CG +++A+ F+ + + D V W ++I GY Q+G AL
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394
Query: 219 NLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMY 278
L+ +M+ E N + +S L C+ + AL+ GKQ+H ++K G+ VG+AL MY
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 279 AKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFV 338
KCGS+++ +F M +D++SWN MI+G S++G G AL F+ M EG KPD T V
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 339 NLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV 398
+LSACSH GLVD+G YF M+ ++ + P +HYACMVD+L RAG L +A +++
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 399 DHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELV 458
+ +W LLG R H N ++ A +K+ + S YVLLS++Y + G+W DV +
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 459 RRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
R M+ +GV K PG SWIE+++ H F VGD HP+ DEI + L L MK GY
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 178/350 (50%), Gaps = 35/350 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSIL-SDLNRTEFLDTGRQVHSLAMK 59
M+SGY G + A +LF++M E + V +++ R L R++ + +
Sbjct: 101 MISGYLRNGEFELARKLFDEM------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPE 154
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ S N +++ YA+ G +DDA F+ KN ++W+A+++ Y Q+ E+A L
Sbjct: 155 RDVCSW----NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F S ++ L G + IVE RQ S+ + + ++++ YA+
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKK----IVEARQFFD-SMNV---RDVVSWNTIITGYAQ 262
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G + +AR+ F+ DV WT++++GY+QN E A L+ KM ER NE++ ++
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ER---NEVSWNAM 318
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNL----EVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
LA QG++M + K F++ V + + YA+CG + + +F +MP
Sbjct: 319 ------LAGYVQGERME--MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
RD +SW AMI+G SQ+GH +AL LF +M EG + + +F + LS C+
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/466 (37%), Positives = 265/466 (56%), Gaps = 5/466 (1%)
Query: 69 ANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
+N L+ Y + G L +A + F+ ++ TW+AM+ G Q +E+ L LF MH G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
P E+TL V + + L ++ G+Q+HGY++K G L L V SSL MY + G L D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA 248
+ ++V W ++I G QNG E L LY M+I PN++T +VL +CS LA
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISG 308
QG+Q+HA IK G + V V S+L +MY+KCG L D F D + W++MIS
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 309 LSQNGHGNKALELFDKMLLE-GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
+G G++A+ELF+ M + + + V F+NLL ACSH GL D+G + F MM +++
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
P ++HY C+VD+L RAG L++A+ I S + + +W+ LL C H+N ++ ++
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 428 LMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVV 487
++++ +S+ YVLL++++ + +W DV VR+ M+ + V KE G SW E K VH F +
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447
Query: 488 GDSMHPQIDEIRSELRLLTKLMKDEGYQPH----LDSLPESETTGD 529
GD + EI S L+ LT MK +GY+P L + E E D
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESD 493
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 175/343 (51%), Gaps = 5/343 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++G +E + LF +M +E+ L S+ S + G+Q+H +K
Sbjct: 62 MIAGLIQFEFNEEGLSLFREMH-GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL + V ++L +Y + G L D +N + W+ ++ G AQ+G E L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M SG P++ T V V+++CSDL +G+Q+H ++K+G + V+SSL+ MY+KC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP-NELTMASV 239
G L DA + F + D V+W+S+I+ Y +G + A+ L+ M + + NE+ ++
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 240 LKACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR- 297
L ACS D+G ++ ++ KYGF + + + + + G LD I MP +
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
D++ W ++S + + + A +F K +L+ D+ +V L
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVF-KEILQIDPNDSACYVLL 402
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 282/518 (54%), Gaps = 50/518 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
ML G+ G +A +L+E + ++ TS++ L + +D R++ +
Sbjct: 147 MLIGFLQDGRIDDACKLYEMI-----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+++ + +VT Y + +DDA + F+ K ++W++M+ GY Q+G E A LF
Sbjct: 202 SVITWTT----MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M V+ AC+ + + G G +
Sbjct: 258 EVMPVKPVI-----------ACNAMIS--------------GLGQK-------------- 278
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G +A ARR F+ +++ + W ++I + +NG AL+L+ MQ + + P T+ S+L
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
C+SLA+L GKQ+HA +++ F+++V V S L MY KCG L LIF R P++D+I
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
WN++ISG + +G G +AL++F +M L G TKP+ VTFV LSACS+ G+V+ G ++
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M F + P HYACMVD+L RAG+ NEA E I+S V+ +W LLG CR H D
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+ + +KL+E+ S Y+LLS++Y + G+W DV +R++MK R V K PGCSW E++
Sbjct: 519 VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Query: 480 SLVHVFVVGD-SMHPQIDEIRSELRLLTKLMKDEGYQP 516
+ VH F G + HP+ + I L L L+++ GY P
Sbjct: 579 NKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNP 616
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 64/332 (19%)
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
AN +T ++ G + +A + F+ +K+ +W++MV GY + A +LF M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR 187
++ + LV Y K G + +AR
Sbjct: 79 IIS---------------------------------------WNGLVSGYMKNGEIDEAR 99
Query: 188 RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA 247
+ F+ + + +VV WT+++ GYV NG + A +L+ KM + N+++ +L
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDG 155
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKC--GSLDDGYLIFWRMPTRDVISWNAM 305
+D +++ +I N+ + S ++ C G +D+ IF M R VI+W M
Sbjct: 156 RIDDACKLYE-MIPDKDNI-----ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD 365
++G QN + A ++FD M + V++ ++L MG V G + + F+
Sbjct: 210 VTGYGQNNRVDDARKIFDVM----PEKTEVSWTSML-----MGYVQNG--RIEDAEELFE 258
Query: 366 ITPTVEHYAC--MVDILSRAGKLNEAKEFIES 395
+ P AC M+ L + G++ +A+ +S
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDS 290
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
D +F MP R++ISWN ++SG +NG ++A ++FD M + + V++ L+
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYV 121
Query: 346 HMGLVDRGWDYFKMMSDEFDITPTVEHYACMVD-ILSRAGKLNEA---KEFIESAEVDHG 401
H G VD F M ++ ++ TV + D + A KL E K+ I + HG
Sbjct: 122 HNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHG 181
Query: 402 LC 403
LC
Sbjct: 182 LC 183
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 286/506 (56%), Gaps = 2/506 (0%)
Query: 43 RTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSA 102
RT G Q+H +K+GL I VAN L+ Y+K D+ R FE S K+S TWS+
Sbjct: 27 RTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSS 86
Query: 103 MVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG 162
+++ +AQ+ +L M + P + L +C+ L GR +H S+K G
Sbjct: 87 IISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTG 146
Query: 163 FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
+ ++V SSLVDMYAKCG + AR+ F+ + Q +VV W+ ++ GY Q G+ E AL L+
Sbjct: 147 YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK 206
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCG 282
+ E + N+ + +SV+ C++ L+ G+Q+H IK F+ VGS+L ++Y+KCG
Sbjct: 207 EALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
+ Y +F +P +++ WNAM+ +Q+ H K +ELF +M L G KP+ +TF+N+L+
Sbjct: 267 VPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 343 ACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
ACSH GLVD G YF M E I PT +HYA +VD+L RAG+L EA E I + +D
Sbjct: 327 ACSHAGLVDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTE 385
Query: 403 CLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMM 462
+W LL C H+N ++ A+A +K+ ELG S ++ LS+ Y A G++ED R+++
Sbjct: 386 SVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLL 445
Query: 463 KARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLP 522
+ RG KE G SW+E ++ VH F G+ H + EI +L L + M+ GY S
Sbjct: 446 RDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIAD-TSYV 504
Query: 523 ESETTGDDLGDQEGSHEIQLRVCGGV 548
E GD+ H +L + G+
Sbjct: 505 LREVDGDEKNQTIRYHSERLAIAFGL 530
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 2/207 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GYA +G +EA+ LF++ E N++ +S++S + L+ GRQ+H L++K+
Sbjct: 188 MMYGYAQMGENEEALWLFKEA-LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKS 246
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S V ++LV+LY+KCG + A + F KN W+AM+ YAQ ++K + LF
Sbjct: 247 SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELF 306
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M SG+ P+ T + V+NACS + EGR + +SLVDM +
Sbjct: 307 KRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRA 366
Query: 181 GSLADARRGFEYVQ-QPDVVLWTSIIT 206
G L +A + P +W +++T
Sbjct: 367 GRLQEALEVITNMPIDPTESVWGALLT 393
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 288/521 (55%), Gaps = 15/521 (2%)
Query: 1 MLSGYASLG-LAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
+LSG + G EA+ +F M E E ++ TS+++ L RQ+H L +K
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDH-VSFTSVITTCCHETDLKLARQIHGLCIK 304
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G S++ V N L++ Y+KCG L+ F +N ++W+ M+ S + + A+ +
Sbjct: 305 RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSI 359
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F +M GV P+E T VG+INA I EG ++HG +K GF + V +S + +YAK
Sbjct: 360 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
+L DA++ FE + +++ W ++I+G+ QNG AL ++ E +PNE T SV
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSV 478
Query: 240 LKACSSLA--ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
L A + ++ QG++ HA ++K G N V SAL MYAK G++D+ +F M +
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
+ W ++IS S +G + LF KM+ E PD VTF+++L+AC+ G+VD+G++ F
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIF 598
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
MM + +++ P+ EHY+CMVD+L RAG+L EA+E + G + + +LG CR H N
Sbjct: 599 NMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGN 658
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
+GA E ME+ S +YV + +IY +W+ +R+ M+ + V+KE G SWI+
Sbjct: 659 VKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWID 718
Query: 478 LKS-----LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEG 513
+ + F GD HP+ DEI + ++ M EG
Sbjct: 719 VGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 207/393 (52%), Gaps = 15/393 (3%)
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEF 91
F ++ LS +E G Q+ S +K GL S + V N+ +T+Y++ GS A R F+
Sbjct: 175 FTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 92 SGNKNSITWSAMVTGYAQSGD-SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVE 150
K+ I+W+++++G +Q G +A+ +F M GV + VI C +
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
RQ+HG +K G+ L V + L+ Y+KCG L + F + + +VV WT++I+
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS---S 351
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
N D A++++ M+ + + PNE+T ++ A + +G ++H IK GF E V
Sbjct: 352 NKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
G++ +YAK +L+D F + R++ISWNAMISG +QNG ++AL++F E T
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-T 468
Query: 331 KPDTVTFVNLLSACSHMG--LVDRGWD-YFKMMSDEFDITPTVEHYACMVDILSRAGKLN 387
P+ TF ++L+A + V +G + ++ + P V + ++D+ ++ G ++
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNID 526
Query: 388 EA-KEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
E+ K F E ++ + +W ++ +H +++
Sbjct: 527 ESEKVFNEMSQKNQ--FVWTSIISAYSSHGDFE 557
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 156/298 (52%), Gaps = 9/298 (3%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L G Q+H + +G S V V+NA++ +Y K G D+AL FE + + ++W+ +++G
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 151
Query: 107 YAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
+ D++ AL M +GV+ FT ++ C + G Q+ +K G
Sbjct: 152 F---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFE-GALNLYGKMQ 225
L V +S + MY++ GS ARR F+ + D++ W S+++G Q G F A+ ++ M
Sbjct: 209 LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM 268
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
E + + ++ SV+ C L +Q+H IK G+ + VG+ L + Y+KCG L+
Sbjct: 269 REGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLE 328
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+F +M R+V+SW MIS + + A+ +F M +G P+ VTFV L++A
Sbjct: 329 AVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 6/216 (2%)
Query: 132 EFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE 191
E TL + AC + G Q+HG+S GF + V ++++ MY K G +A FE
Sbjct: 78 EVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFE 135
Query: 192 YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQ 251
+ PDVV W +I++G+ N + ALN +M+ ++ + T ++ L C
Sbjct: 136 NLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL 192
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ 311
G Q+ + ++K G ++ VG++ MY++ GS +F M +D+ISWN+++SGLSQ
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 312 NG-HGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
G G +A+ +F M+ EG + D V+F ++++ C H
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 282/479 (58%), Gaps = 7/479 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY + +A+E+F +M + NEF L+S + + + GR H + + +
Sbjct: 134 MMSGYVTGKEHVKALEVFVEMVSFGLDA-NEFTLSSAVKACSELGEVRLGRCFHGVVITH 192
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +++ L LY DA R F+ + I W+A+++ ++++ E+AL LF
Sbjct: 193 GFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF 252
Query: 121 HSMH-CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
++MH G++P T V+ AC +L + +G+++HG + G G + V SSL+DMY K
Sbjct: 253 YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK 312
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CGS+ +AR+ F + + + V W++++ GY QNG+ E A+ ++ +M+ + + +V
Sbjct: 313 CGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTV 368
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
LKAC+ LAA+ GK++H ++ G V V SAL +Y K G +D ++ +M R++
Sbjct: 369 LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM 428
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
I+WNAM+S L+QNG G +A+ F+ M+ +G KPD ++F+ +L+AC H G+VD G +YF +
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVL 488
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC-RNHRNY 418
M+ + I P EHY+CM+D+L RAG EA+ +E AE + LW +LLG C N
Sbjct: 489 MAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADAS 548
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
+ +++MEL +YVLLS++Y A+G+ D +R++M RGVAK G SWI+
Sbjct: 549 RVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 234/470 (49%), Gaps = 15/470 (3%)
Query: 8 LGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVS 67
LG EAI + E + + S+L N+ G Q H+ +K+GL + +
Sbjct: 39 LGQLTEAIRILNSTHSSEIPATPK-LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 68 VANALVTLYAKCGS-LDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCS 126
V N+L++LY K G + + R F+ K++I+W++M++GY + KAL +F M
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 127 GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADA 186
G+ +EFTL + ACS+L + GR HG + GF ++ S+L +Y DA
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 187 RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER-IIPNELTMASVLKACSS 245
RR F+ + +PDV+ WT++++ + +N +E AL L+ M + ++P+ T +VL AC +
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
L L QGK++H +I G V V S+L MY KCGS+ + +F M ++ +SW+A+
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD 365
+ G QNG KA+E+F +M + D F +L AC+ + V G +
Sbjct: 338 LGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 366 ITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG-CRNHRNYDIGAYA 424
+ A ++D+ ++G ++ A + + + W +L +N R + ++
Sbjct: 394 FGNVIVESA-LIDLYGKSGCIDSASRVYSKMSIRN-MITWNAMLSALAQNGRGEEAVSFF 451
Query: 425 GEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRR--MMKARGVAKEPG 472
+ + + P+ Y+ +I TA G V+ R ++ A+ +PG
Sbjct: 452 NDMVKKGIKPD---YISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPG 498
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 262/471 (55%), Gaps = 37/471 (7%)
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPS 131
L+ + + S+D A F + N N ++AM+ G+ SG S + L+H M + VLP
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPD 126
Query: 132 EFTLVGVINACS-DLCAIVEGRQMHGYSLKLGFG---------LQLY------------- 168
+ + V+ AC +C R++H LKLGFG +++Y
Sbjct: 127 NYVITSVLKACDLKVC-----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 169 ---------VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALN 219
+ +++ Y++CG + +A F+ V+ D V WT++I G V+N + AL
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALE 241
Query: 220 LYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
L+ +MQ+E + NE T VL ACS L AL+ G+ +H+ + L VG+AL MY+
Sbjct: 242 LFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYS 301
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
+CG +++ +F M +DVIS+N MISGL+ +G +A+ F M+ G +P+ VT V
Sbjct: 302 RCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVA 361
Query: 340 LLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVD 399
LL+ACSH GL+D G + F M F++ P +EHY C+VD+L R G+L EA FIE+ ++
Sbjct: 362 LLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIE 421
Query: 400 HGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVR 459
+ LL C+ H N ++G ++L E +P+S YVLLS++Y + G+W++ +R
Sbjct: 422 PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIR 481
Query: 460 RMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
M+ G+ KEPGCS IE+ + +H F+VGD HP + I L+ L ++++
Sbjct: 482 ESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 180/373 (48%), Gaps = 43/373 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ G+ S G + + + L+ +M +N +V+TS+L + L R++H+ +K
Sbjct: 98 MIDGFVSSGRSADGVSLYHRMIHNSVLPDN-YVITSVLKACD----LKVCREIHAQVLKL 152
Query: 61 GLLSIVSV-------------------------------ANALVTLYAKCGSLDDALRTF 89
G S SV A ++ Y++CG + +AL F
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF 212
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ K+++ W+AM+ G ++ + KAL LF M V +EFT V V++ACSDL A+
Sbjct: 213 QDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALE 272
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
GR +H + L +V ++L++MY++CG + +ARR F ++ DV+ + ++I+G
Sbjct: 273 LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP 269
+G A+N + M PN++T+ ++L ACS LD G ++ +K FN+E
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS-MKRVFNVEPQ 391
Query: 270 VGS--ALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKAL-ELFDKM 325
+ + + + G L++ Y +P D I ++S HGN L E K
Sbjct: 392 IEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI--HGNMELGEKIAKR 449
Query: 326 LLEGTKPDTVTFV 338
L E PD+ T+V
Sbjct: 450 LFESENPDSGTYV 462
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 41/290 (14%)
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
TL+ V+ +C ++ + +H ++ +V+ L+ + + S+ A F YV
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
P+V L+T++I G+V +G ++LY +M ++P+ + SVLKAC L +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCR 143
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR---------------- 297
++HA ++K GF VG + +Y K G L + +F MP R
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 298 ---------------DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
D + W AMI GL +N NKALELF +M +E + T V +LS
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 343 ACSHMGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE 391
ACS +G ++ G W + + + +++ V + ++++ SR G +NEA+
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGN--ALINMYSRCGDINEARR 311
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 290/512 (56%), Gaps = 2/512 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY + KEA+E F M + + E +TSI++ R L G ++H+ +K+
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSD-EVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S + V N L+ +Y+KC R F +K+ I+W+ ++ GYAQ+ +AL LF
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ + E L ++ A S L +++ +++H + L+ G L + + LVD+Y KC
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKC 534
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
++ A R FE ++ DVV WTS+I+ NG+ A+ L+ +M + + + + +L
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 594
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
A +SL+AL++G+++H +++ GF LE + A+ MYA CG L +F R+ + ++
Sbjct: 595 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 654
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+ +MI+ +G G A+ELFDKM E PD ++F+ LL ACSH GL+D G + K+M
Sbjct: 655 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 714
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
E+++ P EHY C+VD+L RA + EA EF++ + + +W LL CR+H +I
Sbjct: 715 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 774
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G A ++L+EL VL+S+++ G+W DVE VR MKA G+ K PGCSWIE+
Sbjct: 775 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 834
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE 512
VH F D HP+ EI +L +T+ ++ E
Sbjct: 835 KVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 179/354 (50%), Gaps = 15/354 (4%)
Query: 16 ELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN-GLLSIVSVANALVT 74
E F+++ E E +L + + GRQ+HS K + +A LV
Sbjct: 66 EAFQRLDVSENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVF 124
Query: 75 LYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFT 134
+Y KCGSLDDA + F+ ++ + W+ M+ Y +G+ AL L+ +M GV +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 135 LVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ 194
++ AC+ L I G ++H +KLG+ +++++LV MYAK L+ ARR F+ Q
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 195 QP-DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+ D VLW SI++ Y +G L L+ +M + PN T+ S L AC + GK
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 254 QMHAGIIKYG-FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
++HA ++K + E+ V +AL AMY +CG + I +M DV++WN++I G QN
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACS-----------HMGLVDRGWD 355
+ALE F M+ G K D V+ ++++A H ++ GWD
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 214/399 (53%), Gaps = 6/399 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+LS Y++ G + E +ELF +M N + + S L+ + + G+++H+ +K+
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313
Query: 61 GLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
S + V NAL+ +Y +CG + A R N + +TW++++ GY Q+ ++AL
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M +G E ++ +I A L ++ G ++H Y +K G+ L V ++L+DMY+K
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C R F + D++ WT++I GY QN AL L+ + +R+ +E+ + S+
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L+A S L ++ K++H I++ G L+ + + L +Y KC ++ +F + +DV
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 552
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFK 358
+SW +MIS + NG+ ++A+ELF +M+ G D+V + +LSA + + +++G + +
Sbjct: 553 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 612
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
++ F + ++ +VD+ + G L AK + E
Sbjct: 613 LLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE 649
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKY--GFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
A VL+ C A+ QG+Q+H+ I K F L+ G L MY KCGSLDD +F
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFD 140
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
MP R +WN MI NG AL L+ M +EG +F LL AC+ + +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 353 GWDYFKMM------SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR 406
G + ++ S F + V YA + L+ A+ + + LW
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYA-------KNDDLSAARRLFDGFQEKGDAVLWN 253
Query: 407 ILLGGCRNHRNYDIGAYAGEKL-----MELGSPESSAYVLLSSI 445
+L +Y + E L M + P ++Y ++S++
Sbjct: 254 SILS------SYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 295/548 (53%), Gaps = 39/548 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
ML A + + LF ++R + +N F L +L + R + G +VH A+K
Sbjct: 17 MLKSLADGKSFTKVLALFGELRGQGLYPDN-FTLPVVLKSIGRLRKVIEGEKVHGYAVKA 75
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL V+N+L+ +YA G ++ + F+ ++ ++W+ +++ Y +G E A+ +F
Sbjct: 76 GLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVF 135
Query: 121 HSMHCSGVLP-SEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M L E T+V ++ACS L + G +++ + + F + + + ++LVDM+ K
Sbjct: 136 KRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCK 194
Query: 180 CGSLADARRGFE-----------------------------YVQQP--DVVLWTSIITGY 208
CG L AR F+ + + P DVVLWT+++ GY
Sbjct: 195 CGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGY 254
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
VQ F+ AL L+ MQ I P+ + S+L C+ AL+QGK +H I + ++
Sbjct: 255 VQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDK 314
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
VG+AL MYAKCG ++ +F+ + RD SW ++I GL+ NG +AL+L+ +M
Sbjct: 315 VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENV 374
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G + D +TFV +L+AC+H G V G F M++ ++ P EH +C++D+L RAG L+E
Sbjct: 375 GVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDE 434
Query: 389 AKEFIES--AEVDHGLC-LWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSI 445
A+E I+ E D L ++ LL RN+ N I EKL ++ +SSA+ LL+S+
Sbjct: 435 AEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASV 494
Query: 446 YTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSM--HPQIDEIRSELR 503
Y + +WEDV VRR MK G+ K PGCS IE+ + H F+VGD + HP++DEI S L
Sbjct: 495 YASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLH 554
Query: 504 LLTKLMKD 511
T LM D
Sbjct: 555 QTTNLMLD 562
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 37/336 (11%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+ ++ M+ A K L LF + G+ P FTL V+ + L ++EG ++HGY
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGA 217
++K G YV +SL+ MYA G + + F+ + Q DVV W +I+ YV NG FE A
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 218 LNLYGKMQIERIIP-NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA 276
+ ++ +M E + +E T+ S L ACS+L L+ G++++ ++ F + V +G+AL
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVD 190
Query: 277 MYAKCGSLDD---------------------GY----------LIFWRMPTRDVISWNAM 305
M+ KCG LD GY ++F R P +DV+ W AM
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG-WDYFKMMSDEF 364
++G Q ++ALELF M G +PD V+LL+ C+ G +++G W + + +
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 365 DITPTVEHYACMVDILSRAGKLNEAKE-FIESAEVD 399
+ V +VD+ ++ G + A E F E E D
Sbjct: 311 TVDKVVG--TALVDMYAKCGCIETALEVFYEIKERD 344
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 193 VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG 252
+Q P ++++ ++ F L L+G+++ + + P+ T+ VLK+ L + +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 253 KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
+++H +K G + V ++L MYA G ++ + +F MP RDV+SWN +IS N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 313 GHGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
G A+ +F +M E K D T V+ LSACS + ++ G ++ + EF+++ +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+ +VD+ + G L++A+ +S + C ++ G
Sbjct: 186 N--ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFG 222
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 290/538 (53%), Gaps = 46/538 (8%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLL--SIVSVAN-ALVTLYAKCGSLDDALRTFEFSGNKNS 97
+++++ +D Q+H+ +++ LL V N L YA G + +L F + + +
Sbjct: 36 IDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDL 95
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
++A + + +G ++A L+ + S + P+EFT ++ +CS G+ +H +
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTH 151
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE----------------YVQQ------ 195
LK G G+ YV + LVD+YAK G + A++ F+ Y +Q
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 196 ---------PDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSS 245
D+V W +I GY Q+G AL L+ K+ E + P+E+T+ + L ACS
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
+ AL+ G+ +H + L V V + L MY+KCGSL++ L+F P +D+++WNAM
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 306 ISGLSQNGHGNKALELFDKML-LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEF 364
I+G + +G+ AL LF++M + G +P +TF+ L AC+H GLV+ G F+ M E+
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 391
Query: 365 DITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYA 424
I P +EHY C+V +L RAG+L A E I++ +D LW +LG C+ H ++ +G
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEI 451
Query: 425 GEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHV 484
E L+ L S YVLLS+IY ++G +E V VR +MK +G+ KEPG S IE+++ VH
Sbjct: 452 AEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHE 511
Query: 485 FVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSHEIQL 542
F GD H + EI + LR +++ +K GY +P + T DL + E +Q+
Sbjct: 512 FRAGDREHSKSKEIYTMLRKISERIKSHGY------VPNTNTVLQDLEETEKEQSLQV 563
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 117/220 (53%), Gaps = 9/220 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GYA G +A+ LF+++ E + +E + + LS ++ L+TGR +H +
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ V V L+ +Y+KCGSL++A+ F + K+ + W+AM+ GYA G S+ ALRLF
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 121 HSMH-CSGVLPSEFTLVGVINACSDLCAIVEG-RQMHGYSLKLGFGLQLYVLSSLVDMYA 178
+ M +G+ P++ T +G + AC+ + EG R + G ++ LV +
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 179 KCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDF 214
+ G L +R +E ++ D VLW+S++ +GDF
Sbjct: 409 RAGQL---KRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/514 (33%), Positives = 284/514 (55%), Gaps = 4/514 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G+ + K A L M + + +L+ L+ F + +QVH+ +K
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL +++ NA+++ YA CGS+ DA R F+ G+K+ I+W++M+ G+++ E A L
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M V +T G+++ACS + G+ +HG +K G ++L+ MY +
Sbjct: 293 FIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Query: 180 --CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
G++ DA FE ++ D++ W SIITG+ Q G E A+ + ++ I ++ +
Sbjct: 353 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS 412
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
++L++CS LA L G+Q+HA K GF V S+L MY+KCG ++ F ++ ++
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Query: 298 -DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
++WNAMI G +Q+G G +L+LF +M + K D VTF +L+ACSH GL+ G +
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
+M + I P +EHYA VD+L RAG +N+AKE IES ++ + + LG CR
Sbjct: 533 LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACG 592
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
++ L+E+ + YV LS +Y+ L +WE+ V++MMK RGV K PG SWI
Sbjct: 593 EIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
E+++ V F D +P +I ++ LT+ M+
Sbjct: 653 EIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 208/427 (48%), Gaps = 22/427 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY S G ++A LF M+ + + + + +L + + D G QVH L +K
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDG-YSFSRLLKGIASVKRFDLGEQVHGLVIKG 130
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V V ++LV +YAKC ++DA F+ NS++W+A++ G+ Q D + A L
Sbjct: 131 GYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLL 190
Query: 121 HSMHCSGVLPSEF-TLVGVINACSD--LCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
M + + T ++ D C ++ +Q+H LKLG ++ + ++++ Y
Sbjct: 191 GLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL--KQVHAKVLKLGLQHEITICNAMISSY 248
Query: 178 AKCGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
A CGS++DA+R F+ + D++ W S+I G+ ++ E A L+ +MQ + + T
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTY 308
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK--CGSLDDGYLIFWRM 294
+L ACS GK +H +IK G +AL +MY + G+++D +F +
Sbjct: 309 TGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
++D+ISWN++I+G +Q G A++ F + K D F LL +CS + + G
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 355 DYFKM------MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRIL 408
+ +S+EF I+ + Y S+ G + A++ + H W +
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMY-------SKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 409 LGGCRNH 415
+ G H
Sbjct: 482 ILGYAQH 488
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD 112
H A+K G +S + V+N ++ Y K G L A F+ ++S++W+ M++GY G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 113 SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS 172
E A LF M SG ++ ++ + + G Q+HG +K G+ +YV SS
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
LVDMYAKC + DA F+ + +P+ V W ++I G+VQ D + A L G M+++ +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 233 EL-TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
+ T A +L + KQ+HA ++K G E+ + +A+ + YA CGS+ D +F
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 292 WRM-PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+ ++D+ISWN+MI+G S++ A ELF +M + D T+ LLSACS
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%)
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHG 315
H IK G ++ V + + Y K G L ++F MP RD +SWN MISG + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
A LF M G+ D +F LL + + D G
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 278/520 (53%), Gaps = 10/520 (1%)
Query: 8 LGLAK-----EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN-G 61
LGL+K EA+ L E T +L + L G ++ SL + N
Sbjct: 103 LGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPS 162
Query: 62 LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSIT---WSAMVTGYAQSGDSEKALR 118
L + + L+TL++ C LD A + F+ + + +T W+AM GY+++G AL
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
++ M CS + P F++ + AC DL + GR +H +K + V + L+ +Y
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYM 282
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
+ G DAR+ F+ + + +VV W S+I+ + NL+ KMQ E I + T+ +
Sbjct: 283 ESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+L ACS +AAL GK++HA I+K +VP+ ++L MY KCG ++ +F M T+D
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ SWN M++ + NG+ + + LF+ M+ G PD +TFV LLS CS GL + G F+
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE 462
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M EF ++P +EHYAC+VDIL RAGK+ EA + IE+ +W LL CR H N
Sbjct: 463 RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNV 522
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+G A ++L L YV++S+IY W++V+ +R MMK RGV KE GCSW+++
Sbjct: 523 SVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQV 582
Query: 479 KSLVHVFVVGDSMH-PQIDEIRSELRLLTKLMKDEGYQPH 517
K + +FV G DE + L + ++ GY P+
Sbjct: 583 KDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPN 622
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 287/539 (53%), Gaps = 36/539 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY G +E LF M NEF L+S+L+ + G+QVH LA+K
Sbjct: 133 LITGYVQAGNEQEGFCLFSSML--SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKL 186
Query: 61 GLLSIVSVANALVTLYAKC---GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
GL + VANA++++Y +C + +A FE KN +TW++M+ + +KA+
Sbjct: 187 GLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAI 246
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDL-------------CAIVEGRQMHGYSLKLGFG 164
+F MH GV F ++N CS L C + Q+H ++K G
Sbjct: 247 GVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSKCCL----QLHSLTVKSGLV 299
Query: 165 LQLYVLSSLVDMYAK-CGSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
Q V ++L+ +Y++ D + F E D+V W IIT + D E A++L+G
Sbjct: 300 TQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFG 358
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCG 282
+++ E++ P+ T +SVLKAC+ L +HA +IK GF + + ++L YAKCG
Sbjct: 359 QLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCG 418
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
SLD +F M +RDV+SWN+M+ S +G + L +F KM PD+ TF+ LLS
Sbjct: 419 SLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLS 475
Query: 343 ACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
ACSH G V+ G F+ M ++ + P + HYAC++D+LSRA + EA+E I+ +D
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 403 CLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESS-AYVLLSSIYTALGQWEDVELVRRM 461
+W LLG CR H N +G A +KL EL P +S +Y+ +S+IY A G + + L +
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE 595
Query: 462 MKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDS 520
M+ V KEP SW E+ + VH F G P + + EL+ L +K+ GY P + S
Sbjct: 596 METWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRS 654
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 160/301 (53%), Gaps = 29/301 (9%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM-- 123
V +AN L+ +YAKCG++ A + F+ +N ++W+A++TGY Q+G+ ++ LF SM
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 124 HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
HC P+EFTL V+ +C G+Q+HG +LKLG +YV ++++ MY +C
Sbjct: 156 HC---FPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 184 ADARRG---FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
A A FE ++ ++V W S+I + + A+ ++ +M + + A++L
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLL 265
Query: 241 KACSS------LAALDQGK---QMHAGIIKYGFNLEVPVGSALSAMYAK-CGSLDDGYLI 290
CSS L + K Q+H+ +K G + V +AL +Y++ D Y +
Sbjct: 266 NICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL 325
Query: 291 FWRMP-TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
F M RD+++WN +I+ + +A+ LF ++ E PD TF ++L AC+ GL
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACA--GL 382
Query: 350 V 350
V
Sbjct: 383 V 383
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK--YGFNL 266
V++GD A++L+ +E + ++ A++ +AC+ L G +H ++ Y ++
Sbjct: 37 VRSGDIRRAVSLFYSAPVE--LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
V + + L MYAKCG++ +F MP R+V+SW A+I+G Q G+ + LF M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM- 153
Query: 327 LEGTKPDTVTFVNLLSACSH 346
L P+ T ++L++C +
Sbjct: 154 LSHCFPNEFTLSSVLTSCRY 173
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 234/372 (62%), Gaps = 1/372 (0%)
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G +H ++ GFG +YV +SL+ +YA CG +A A + F+ + + D+V W S+I G+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
NG E AL LY +M + I P+ T+ S+L AC+ + AL GK++H +IK G +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM-LLEG 329
+ L +YA+CG +++ +F M ++ +SW ++I GL+ NG G +A+ELF M EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
P +TFV +L ACSH G+V G++YF+ M +E+ I P +EH+ CMVD+L+RAG++ +A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 390 KEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTAL 449
E+I+S + + +WR LLG C H + D+ +A ++++L S YVLLS++Y +
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 450 GQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLM 509
+W DV+ +R+ M GV K PG S +E+ + VH F++GD HPQ D I ++L+ +T +
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 510 KDEGYQPHLDSL 521
+ EGY P + ++
Sbjct: 367 RSEGYVPQISNV 378
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 159/287 (55%), Gaps = 5/287 (1%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G +HS+ +++G S++ V N+L+ LYA CG + A + F+ K+ + W++++ G+A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
+G E+AL L+ M+ G+ P FT+V +++AC+ + A+ G+++H Y +K+G L+
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ-IER 228
+ L+D+YA+CG + +A+ F+ + + V WTS+I G NG + A+ L+ M+ E
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDG 287
++P E+T +L ACS + +G + + +Y + + + A+ G +
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 288 YLIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
Y MP + +V+ W ++ + HG+ L F ++ + +P+
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTV--HGDSDLAEFARIQILQLEPN 291
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 136/242 (56%), Gaps = 20/242 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G+A G +EA+ L+ +M + + + F + S+LS + L G++VH +K
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDG-FTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL + +N L+ LYA+CG +++A F+ +KNS++W++++ G A +G ++A+ LF
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 121 HSMHCS-GVLPSEFTLVGVINACSDLCAIVEG-----RQMHGYSLKLGFGLQLYVLSSLV 174
M + G+LP E T VG++ ACS + EG R Y ++ ++ +V
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE----PRIEHFGCMV 234
Query: 175 DMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
D+ A+ G + ++ +EY++ QP+VV+W +++ +GD + L + ++QI ++
Sbjct: 235 DLLARAGQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLE 289
Query: 231 PN 232
PN
Sbjct: 290 PN 291
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
+A + G+ +H+ +I+ GF + V ++L +YA CG + Y +F +MP +D+++WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD 365
I+G ++NG +AL L+ +M +G KPD T V+LLSAC+ +G + G M +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVG 119
Query: 366 ITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+T + ++D+ +R G++ EAK + VD W L+ G
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVG 164
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 267/520 (51%), Gaps = 3/520 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG A G A+ F +MR E N+F + TG+Q+H+LA+K
Sbjct: 79 LISGLAQNGHFSTALVEFFEMR-REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V V + +Y K DDA + F+ +N TW+A ++ G +A+ F
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
P+ T +NACSD + G Q+HG L+ GF + V + L+D Y KC
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ + F + + V W S++ YVQN + E A LY + + + + ++ ++SVL
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
AC+ +A L+ G+ +HA +K + VGSAL MY KCG ++D F MP ++++
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLE--GTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ N++I G + G + AL LF++M G P+ +TFV+LLSACS G V+ G F
Sbjct: 378 TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD 437
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M + I P EHY+C+VD+L RAG + A EFI+ + + +W L CR H
Sbjct: 438 SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKP 497
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+G A E L +L +S +VLLS+ + A G+W + VR +K G+ K G SWI +
Sbjct: 498 QLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITV 557
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHL 518
K+ VH F D H EI++ L L M+ GY+P L
Sbjct: 558 KNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL 597
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 197/410 (48%), Gaps = 7/410 (1%)
Query: 50 GRQVHSLAMKN-GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYA 108
GR VH+ +K +AN L+ +Y+K + A + +N ++W+++++G A
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
Q+G AL F M GV+P++FT A + L V G+Q+H ++K G L ++
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
V S DMY K DAR+ F+ + + ++ W + I+ V +G A+ + ++ R
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFRR 202
Query: 229 I--IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
I PN +T + L ACS L+ G Q+H +++ GF+ +V V + L Y KC +
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
+IF M T++ +SW ++++ QN KA L+ + + + ++LSAC+
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR 406
M ++ G + + + T+ + +VD+ + G + ++++ + + L
Sbjct: 323 MAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRN 380
Query: 407 ILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVE 456
L+GG + D+ E++ G + Y+ S+ +A + VE
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 301 bits (770), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 275/499 (55%), Gaps = 2/499 (0%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
E + L++QM E+ + ++ +I + L+ L+ G V A+ G + V V +++
Sbjct: 99 EVLRLYDQMIAEKIQPDSSTFTMTIKACLSGL-VLEKGEAVWCKAVDFGYKNDVFVCSSV 157
Query: 73 VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSE 132
+ LY KCG +D+A F ++ I W+ MVTG+AQ+G S KA+ + M G
Sbjct: 158 LNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDR 217
Query: 133 FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY 192
++G++ A DL GR +HGY + G + + V +SLVDMYAK G + A R F
Sbjct: 218 VVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSR 277
Query: 193 VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG 252
+ V W S+I+G+ QNG A +MQ P+ +T+ VL ACS + +L G
Sbjct: 278 MMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
Query: 253 KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
+ +H I+K L+ +AL MY+KCG+L IF + +D++ WN MIS +
Sbjct: 338 RLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIH 396
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
G+G + + LF KM +PD TF +LLSA SH GLV++G +F +M +++ I P+ +H
Sbjct: 397 GNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKH 456
Query: 373 YACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG 432
Y C++D+L+RAG++ EA + I S ++D+ L +W LL GC NHRN +G A K+++L
Sbjct: 457 YVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLN 516
Query: 433 SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMH 492
L+S+ + +W++V VR++M+ + K PG S IE+ + F++ D H
Sbjct: 517 PDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Query: 493 PQIDEIRSELRLLTKLMKD 511
+ + LR L ++D
Sbjct: 577 HEHYHMLQVLRNLKTEIRD 595
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 182/362 (50%), Gaps = 10/362 (2%)
Query: 52 QVHSLAMKNG-LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
Q+H+ + G LL+ S++ L+ + G + A + F+ + +++M+ Y++
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
+ ++ LRL+ M + P T I AC + +G + ++ G+ ++V
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
SS++++Y KCG + +A F + + DV+ WT+++TG+ Q G A+ Y +MQ E
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
+ + M +L+A L G+ +H + + G + V V ++L MYAK G ++ +
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F RM + +SW ++ISG +QNG NKA E +M G +PD VT V +L ACS +G +
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 351 DRGW--DYFKMMSDEFD-ITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
G + + D +T T ++D+ S+ G L+ ++E E +C W
Sbjct: 335 KTGRLVHCYILKRHVLDRVTATA-----LMDMYSKCGALSSSREIFEHVGRKDLVC-WNT 388
Query: 408 LL 409
++
Sbjct: 389 MI 390
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 181/354 (51%), Gaps = 26/354 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILS---DLNRTEFLDTGRQVHSLA 57
M++G+A G + +A+E + +M+ E G + V+ +L DL T+ GR VH
Sbjct: 188 MVTGFAQAGKSLKAVEFYREMQ-NEGFGRDRVVMLGLLQASGDLGDTKM---GRSVHGYL 243
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
+ GL V V +LV +YAK G ++ A R F K +++W ++++G+AQ+G + KA
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
M G P TLVGV+ ACS + ++ GR +H Y LK L ++L+DMY
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMY 362
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
+KCG+L+ +R FE+V + D+V W ++I+ Y +G+ + ++L+ KM I P+ T A
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 238 SVLKACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDGY-LIFWRMP 295
S+L A S ++QG+ + +I KY L + A+ G +++ +I
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKL 482
Query: 296 TRDVISWNAMISGLSQNGH-------GNKALELFDKMLLEGTKPDTVTFVNLLS 342
+ W A++SG + + NK L+L PD++ L+S
Sbjct: 483 DNALPIWVALLSGCINHRNLSVGDIAANKILQL---------NPDSIGIQTLVS 527
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 282/536 (52%), Gaps = 39/536 (7%)
Query: 25 EEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDD 84
E + E +++S++S L+ L+ +Q+H ++ GL + L+ K G D
Sbjct: 40 EISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD 99
Query: 85 --ALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINAC 142
A R E +N W+A++ GYA G ++A+ ++ M + P FT ++ AC
Sbjct: 100 PYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC 159
Query: 143 SDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDV---- 198
+ + GRQ H + +L +YV ++++DMY KC S+ AR+ F+ + + DV
Sbjct: 160 GTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWT 219
Query: 199 ---------------------------VLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
V WT+++TG+ QN + AL + +M+ I
Sbjct: 220 ELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279
Query: 232 NELTMASVLKACSSLAA---LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
+E+T+A + AC+ L A D+ Q+ A Y + V +GSAL MY+KCG++++
Sbjct: 280 DEVTVAGYISACAQLGASKYADRAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHM 347
+F M ++V ++++MI GL+ +G +AL LF M+ + KP+TVTFV L ACSH
Sbjct: 339 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHS 398
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
GLVD+G F M F + PT +HY CMVD+L R G+L EA E I++ V+ +W
Sbjct: 399 GLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGA 458
Query: 408 LLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGV 467
LLG CR H N +I A E L EL Y+LLS++Y + G W V VR+++K +G+
Sbjct: 459 LLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGL 518
Query: 468 AKEPGCSWIELKS-LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLP 522
K P SW+ K+ +H F G+ HP ++I+ +L L + + GYQP L S+P
Sbjct: 519 KKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVP 574
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 166/378 (43%), Gaps = 68/378 (17%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYA G EAI ++ MR +EE F +++L + L+ GRQ H+ +
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMR-KEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRT-------------------------------F 89
V V N ++ +Y KC S+D A + F
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
E K+ + W+AMVTG+AQ+ ++AL F M SG+ E T+ G I+AC+ L A
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 150 EGRQMHGYSLKLGFGLQLYVL--SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITG 207
+ + K G+ +V+ S+L+DMY+KCG++ +A F + +V ++S+I G
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 208 YVQNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
+G + AL+L+ M + I PN +T L ACS +DQG+Q+
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV----------- 407
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
D Y F PTRD + M+ L + G +ALEL M
Sbjct: 408 -----------------FDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTMS 448
Query: 327 LEGTKPDTVTFVNLLSAC 344
+E P + LL AC
Sbjct: 449 VE---PHGGVWGALLGAC 463
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 298/553 (53%), Gaps = 12/553 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G+ + L E ++LF +R + + F +L R G +HSL +K
Sbjct: 82 LINGFVNNHLFHETLDLFLSIR-KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V+ +L+++Y+ G L+DA + F+ +++ +TW+A+ +GY SG +A+ LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M GV P + +V V++AC + + G + Y ++ +V ++LV++YAKC
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + AR F+ + + D+V W+++I GY N + + L+ +M E + P++ ++ L
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
+C+SL ALD G+ + I ++ F + + +AL MYAKCG++ G+ +F M +D++
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
NA ISGL++NGH + +F + G PD TF+ LL C H GL+ G +F +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
S + + TVEHY CMVD+ RAG L++A I + +W LL GCR ++ +
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
++L+ L + YV LS+IY+ G+W++ VR MM +G+ K PG SWIEL+
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQE----- 535
VH F+ D HP D+I ++L L M+ G+ +P +E D+ ++E
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGF------VPTTEFVFFDVEEEEKERVL 614
Query: 536 GSHEIQLRVCGGV 548
G H +L V G+
Sbjct: 615 GYHSEKLAVALGL 627
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 158/316 (50%), Gaps = 10/316 (3%)
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
F + N +++++ G+ + + L LF S+ G+ FT V+ AC+ +
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
G +H +K GF + ++SL+ +Y+ G L DA + F+ + VV WT++ +GY
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
+G A++L+ KM + P+ + VL AC + LD G+ I+KY +E+
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW----IVKYMEEMEM 243
Query: 269 P----VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
V + L +YAKCG ++ +F M +D+++W+ MI G + N + +ELF +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAG 384
ML E KPD + V LS+C+ +G +D G ++ + D + + ++D+ ++ G
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 385 KLNEAKE-FIESAEVD 399
+ E F E E D
Sbjct: 363 AMARGFEVFKEMKEKD 378
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 126/222 (56%), Gaps = 2/222 (0%)
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F + Q P++ L+ S+I G+V N F L+L+ ++ + + T VLKAC+ ++
Sbjct: 68 FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
G +H+ ++K GFN +V ++L ++Y+ G L+D + +F +P R V++W A+ SG
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
+ +G +A++LF KM+ G KPD+ V +LSAC H+G +D G K M +E ++
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKN 246
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+V++ ++ GK+ +A+ +S V+ + W ++ G
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 260/450 (57%), Gaps = 7/450 (1%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N +++ Y + + + A F+ K++ +W+ M+TGYA+ G+ EKA LF+SM +
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
+ G I C DL + H + + G+ + M AK LA+A
Sbjct: 188 SWNAMISGYIE-CGDL-----EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
V + ++V W ++I+GYV+N E L L+ M E I PN ++S L CS L+AL
Sbjct: 242 DMTVNK-NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
G+Q+H + K +V ++L +MY KCG L D + +F M +DV++WNAMISG
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
+Q+G+ +KAL LF +M+ +PD +TFV +L AC+H GLV+ G YF+ M ++ + P
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 420
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM 429
+HY CMVD+L RAGKL EA + I S ++ LLG CR H+N ++ +A EKL+
Sbjct: 421 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 430 ELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGD 489
+L S ++ YV L++IY + +WEDV VR+ MK V K PG SWIE+++ VH F D
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD 540
Query: 490 SMHPQIDEIRSELRLLTKLMKDEGYQPHLD 519
+HP++D I +L+ L K MK GY+P L+
Sbjct: 541 RIHPELDSIHKKLKELEKKMKLAGYKPELE 570
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 166/345 (48%), Gaps = 43/345 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GYA G ++A ELF M +NE +++S L+ +A
Sbjct: 161 MITGYARRGEMEKARELFYSMM-----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G+++ A++T Y K ++ A F + + NKN +TW+AM++GY ++ E L+L
Sbjct: 216 GVVAWT----AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKL 271
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F +M G+ P+ L + CS+L A+ GRQ+H K + L+SL+ MY K
Sbjct: 272 FRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG L DA + FE +++ DVV W ++I+GY Q+G+ + AL L+ +M +I P+ +T +V
Sbjct: 332 CGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L AC+ HAG++ G A S+ Y + P D
Sbjct: 392 LLACN-----------HAGLVNIGM--------------AYFESMVRDYKV---EPQPD- 422
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
+ M+ L + G +AL+L M +P F LL AC
Sbjct: 423 -HYTCMVDLLGRAGKLEEALKLIRSMPF---RPHAAVFGTLLGAC 463
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 139/320 (43%), Gaps = 18/320 (5%)
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
+ ++ +SGD + ALR+FH M + L+G+ D ++E Q+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGI---SKDPSRMMEAHQLFDEIPE 121
Query: 161 LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
+ + ++ Y + + A+ F+ + D W ++ITGY + G+ E A L
Sbjct: 122 ----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 221 YGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK 280
+ M +E+ NE++ +++ L++ G V +A+ Y K
Sbjct: 178 FYSM-MEK---NEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMK 229
Query: 281 CGSLDDGYLIFWRMP-TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
++ +F M +++++WNAMISG +N L+LF ML EG +P++ +
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 340 LLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVD 399
L CS + + G +++S + V ++ + + G+L +A + E +
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-K 347
Query: 400 HGLCLWRILLGGCRNHRNYD 419
+ W ++ G H N D
Sbjct: 348 KDVVAWNAMISGYAQHGNAD 367
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 195 QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQ 254
Q + II V++GD +GAL ++ M+ + N +T S+L S D +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISK----DPSRM 109
Query: 255 MHAGIIKYGFNLEVPVGSALS-----AMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
M A + F+ E+P S + Y + + + F RMP +D SWN MI+G
Sbjct: 110 MEAHQL---FD-EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGY 165
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
++ G KA ELF M+ + + V++ ++S G +++ +FK + P
Sbjct: 166 ARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFK-------VAPV 214
Query: 370 --VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
V + M+ +A K+ A+ + V+ L W ++ G + + G
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 428 LMELG-SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE-LKSLVHVF 485
++E G P SS LSS + ++L R++ + V+K C+ + L SL+ ++
Sbjct: 275 MLEEGIRPNSSG---LSSALLGCSELSALQLGRQIHQI--VSKSTLCNDVTALTSLISMY 329
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 281/517 (54%), Gaps = 8/517 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
MLSG+ G +A LF +MR E ++ V+T I S + + L +H++ ++
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS-ASFEKSLKLLEAMHAVGIRL 182
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEF--SGNKNSITWSAMVTGYAQSGDSEKALR 118
G+ V+VAN ++ Y KCG LD A FE G++ ++W++M Y+ G++ A
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
L+ M P T + + +C + + +GR +H +++ LG + +++ + MY+
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
K AR F+ + V WT +I+GY + GD + AL L+ M P+ +T+ S
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLE-VPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
++ C +L+ GK + A YG + V + +AL MY+KCGS+ + IF P +
Sbjct: 363 LISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
V++W MI+G + NG +AL+LF KM+ KP+ +TF+ +L AC+H G +++GW+YF
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYF 482
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE--SAEVDHGLCLWRILLGGCRNH 415
+M ++I+P ++HY+CMVD+L R GKL EA E I SA+ D G +W LL C+ H
Sbjct: 483 HIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAG--IWGALLNACKIH 540
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
RN I A E L L ++ YV +++IY A G W+ +R +MK R + K PG S
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESV 600
Query: 476 IELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE 512
I++ H F VG+ H + + I L L+ KD+
Sbjct: 601 IQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKDK 637
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 24/411 (5%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
E++ LF +M+ E N F + R + VH+ +K+ S V V A
Sbjct: 35 ESLLLFREMKRGGFE-PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 73 VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSE 132
V ++ KC S+D A + FE +++ TW+AM++G+ QSG ++KA LF M + + P
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 133 FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY 192
T++ +I + S ++ MH ++LG +Q+ V ++ + Y KCG L A+ FE
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 193 VQQPD--VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALD 250
+ + D VV W S+ Y G+ A LY M E P+ T ++ +C + L
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 251 QGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLS 310
QG+ +H+ I G + ++ + +MY+K L+F M +R +SW MISG +
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTV 370
+ G ++AL LF M+ G KPD VT ++L+S C G ++ G K + DI
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG----KWIDARADI---- 385
Query: 371 EHYAC----------MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
Y C ++D+ S+ G ++EA++ ++ + + W ++ G
Sbjct: 386 --YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAG 433
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 140/269 (52%), Gaps = 2/269 (0%)
Query: 87 RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC 146
R + SG + W+ + D ++L LF M G P+ FT V AC+ L
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
+ +H + +K F ++V ++ VDM+ KC S+ A + FE + + D W ++++
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
G+ Q+G + A +L+ +M++ I P+ +T+ +++++ S +L + MHA I+ G ++
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPT--RDVISWNAMISGLSQNGHGNKALELFDK 324
+V V + + Y KCG LD L+F + R V+SWN+M S G A L+
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
ML E KPD TF+NL ++C + + +G
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 84/159 (52%)
Query: 187 RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSL 246
RR + V W I V D +L L+ +M+ PN T V KAC+ L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 247 AALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMI 306
A + + +HA +IK F +V VG+A M+ KC S+D +F RMP RD +WNAM+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 307 SGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
SG Q+GH +KA LF +M L PD+VT + L+ + S
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 291/529 (55%), Gaps = 43/529 (8%)
Query: 43 RTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSA 102
R L T + +H+ +K G++ +AN LV +Y KCG+ AL+ F+ +++ I W++
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 103 MVTGYAQSGDSEKALRLFHSMHCSGVL-PSEFTLVGVINACSDLCAIVEGRQMHGYSLKL 161
++T Q+ S K L +F S+ S L P +F ++ AC++L +I GRQ+H + +
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS 134
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLY 221
+ V SSLVDMYAKCG L A+ F+ ++ + + WT++++GY ++G E AL L+
Sbjct: 135 EYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Query: 222 ---------------------GK----------MQIERI-IPNELTMASVLKACSSLAAL 249
GK M+ ER+ I + L ++S++ AC++LAA
Sbjct: 195 RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAAS 254
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
G+Q+H +I GF+ V + +AL MYAKC + IF RM RDV+SW ++I G+
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
+Q+G KAL L+D M+ G KP+ VTFV L+ ACSH+G V++G + F+ M+ ++ I P+
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM 429
++HY C++D+L R+G L+EA+ I + W LL C+ +G + L+
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 430 ---ELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFV 486
+L P S Y+LLS+IY + W V RR + V K+PG S +E++ VF
Sbjct: 435 SSFKLKDP--STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFY 492
Query: 487 VGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQE 535
G++ HP ++I RLL KL +E + +P++ D+ +QE
Sbjct: 493 AGETSHPLKEDI---FRLLKKL--EEEMRIRNGYVPDTSWILHDMDEQE 536
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 180/358 (50%), Gaps = 37/358 (10%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
++FV ++++ +D GRQVH + + + V ++LV +YAKCG L+ A F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC----------SGVLPS-------- 131
+ KN+I+W+AMV+GYA+SG E+AL LF + SG + S
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 132 --------------EFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
L ++ AC++L A + GRQ+HG + LGF +++ ++L+DMY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
AKC + A+ F ++ DVV WTS+I G Q+G E AL LY M + PNE+T
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 238 SVLKACSSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP- 295
++ ACS + +++G+++ + K YG + + L + + G LD+ + MP
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPF 403
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFV---NLLSACSHMGLV 350
D +W A++S + G G + + D ++ D T++ N+ ++ S G V
Sbjct: 404 PPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKV 461
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG+ G EA +F +MR E + + VL+SI+ GRQVH L +
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G S V ++NAL+ +YAKC + A F +++ ++W++++ G AQ G +EKAL L+
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ--LYVLSSLVDMYA 178
M GV P+E T VG+I ACS + + +GR++ S+ +G++ L + L+D+
Sbjct: 328 DDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF-QSMTKDYGIRPSLQHYTCLLDLLG 386
Query: 179 KCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNG 212
+ G L +A + PD W ++++ + G
Sbjct: 387 RSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 19/190 (10%)
Query: 145 LCA----IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVL 200
LCA + + +H + +KLG + ++LV++Y KCG+ + A + F+ + D +
Sbjct: 12 LCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIA 71
Query: 201 WTSIITGYVQNGDFEGALNLYGKM--------QIERIIPNELTMASVLKACSSLAALDQG 252
W S++T Q NL GK + P++ ++++KAC++L ++D G
Sbjct: 72 WASVLTALNQA-------NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 253 KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
+Q+H I + + V S+L MYAKCG L+ +F + ++ ISW AM+SG +++
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 313 GHGNKALELF 322
G +ALELF
Sbjct: 185 GRKEEALELF 194
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
+IP+ L L+ C+ L K +HA I+K G P+ + L +Y KCG+
Sbjct: 2 LIPHYLHQ---LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL 58
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHM 347
+F MP RD I+W ++++ L+Q K L +F + +PD F L+ AC+++
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 118
Query: 348 GLVDRGWD-YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR 406
G +D G + + E+ V+ + +VD+ ++ G LN AK +S V + + W
Sbjct: 119 GSIDHGRQVHCHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WT 175
Query: 407 ILLGG 411
++ G
Sbjct: 176 AMVSG 180
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 255/470 (54%), Gaps = 7/470 (1%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD 112
+H+L +K G S N LV Y K ++ A + F+ N ++W+++++GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 113 SEKALRLFHSMH-CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
+ AL +F MH V P+E+T V ACS L G+ +H G + V S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 172 SLVDMYAKCGSLADARRGFEYV--QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ--IE 227
SLVDMY KC + ARR F+ + +VV WTS+IT Y QN A+ L+ +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
N+ +ASV+ ACSSL L GK H + + G+ V ++L MYAKCGSL
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 288 YLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
IF R+ VIS+ +MI +++G G A++LFD+M+ P+ VT + +L ACSH
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV--DHGLCLW 405
GLV+ G +Y +M++++ + P HY C+VD+L R G+++EA E ++ EV + G LW
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 406 RILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKAR 465
LL R H +I + A ++L++ +SAY+ LS+ Y G WED E +R MK
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 466 GVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQ 515
G KE CSWIE K V+VF GD + EI L+ L K MK+ G++
Sbjct: 471 GNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHR 520
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 193/383 (50%), Gaps = 13/383 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGY +G + A+ +F++M + NE+ S+ + G+ +H+ +
Sbjct: 101 VISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS 160
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE--FSGNKNSITWSAMVTGYAQSGDSEKALR 118
GL + V+++LV +Y KC ++ A R F+ +N ++W++M+T YAQ+ +A+
Sbjct: 161 GLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIE 220
Query: 119 LFHSMHC--SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
LF S + + ++F L VI+ACS L + G+ HG + G+ V +SL+DM
Sbjct: 221 LFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDM 280
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
YAKCGSL+ A + F ++ V+ +TS+I ++G E A+ L+ +M RI PN +T+
Sbjct: 281 YAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTL 340
Query: 237 ASVLKACSSLAALDQGKQMHAGII-KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
VL ACS +++G + + + KYG + + + M + G +D+ Y + +
Sbjct: 341 LGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIE 400
Query: 296 T---RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
+ + W A++S +G E K L++ + T ++ L +A + V
Sbjct: 401 VGAEQGALLWGALLSAGRLHGRVEIVSEA-SKRLIQSNQQVTSAYIALSNAYA----VSG 455
Query: 353 GWDYFKMMSDEFDITPTVEHYAC 375
GW+ + + E + V+ AC
Sbjct: 456 GWEDSESLRLEMKRSGNVKERAC 478
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 275/518 (53%), Gaps = 43/518 (8%)
Query: 46 FLDTG------RQVHSLAMKNGLLSIVSVANALVTLYAKCGS--LDDALRTFEFSGNKNS 97
LD+G RQ+H+ +G L + V A LD A + + S
Sbjct: 12 LLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTL 71
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSG--VLPSEFTLVGVINACSDLCAIVEGRQMH 155
++M+ + +S EK+ + + SG + P +T+ ++ AC+ L G Q+H
Sbjct: 72 FALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVH 131
Query: 156 GYSLKLGFGLQLYVLSSLVDMY-------------------------------AKCGSLA 184
G +++ GF +V + L+ +Y A+CG +
Sbjct: 132 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
AR+ FE + + D + W ++I+GY Q G+ ALN++ MQ+E + N + M SVL AC+
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACT 251
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
L ALDQG+ H+ I + + V + + L +YAKCG ++ +FW M ++V +W++
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEF 364
++GL+ NG G K LELF M +G P+ VTFV++L CS +G VD G +F M +EF
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 365 DITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYA 424
I P +EHY C+VD+ +RAG+L +A I+ + +W LL R ++N ++G A
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLA 431
Query: 425 GEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHV 484
+K++EL + AYVLLS+IY W++V VR+ MK++GV K+PGCS +E+ VH
Sbjct: 432 SKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHE 491
Query: 485 FVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLP 522
F VGD HP+ +I + + +++ ++ GY+ D+ P
Sbjct: 492 FFVGDKSHPKYTQIDAVWKDISRRLRLAGYKA--DTTP 527
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGYA +G ++EA+ +F M+ E + N + S+LS + LD GR HS +N
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVK-VNGVAMISVLSACTQLGALDQGRWAHSYIERN 269
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ V +A LV LYAKCG ++ A+ F KN TWS+ + G A +G EK L LF
Sbjct: 270 KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELF 329
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL--QLYVLSSLVDMYA 178
M GV P+ T V V+ CS + + EG Q H S++ FG+ QL LVD+YA
Sbjct: 330 SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYA 388
Query: 179 KCGSLADARRGFEYVQQ----PDVVLWTSII 205
+ G L DA +QQ P +W+S++
Sbjct: 389 RAGRLEDA---VSIIQQMPMKPHAAVWSSLL 416
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 260/483 (53%), Gaps = 8/483 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG++ + I LF MR + N + + L R L G+ VH +
Sbjct: 175 MISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + + V ++ +YAK + A R F+ KN +TWSAM+ GY ++ ++A +F
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 121 HSM----HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
M + + V P L+ + C+ + GR +H Y++K GF L L V ++++
Sbjct: 295 FQMLVNDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
YAK GSL DA R F + DV+ + S+ITG V N E + L+ +M+ I P+ T+
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
VL ACS LAAL G H + +G+ + + +AL MY KCG LD +F M
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
RD++SWN M+ G +G G +AL LF+ M G PD VT + +LSACSH GLVD G
Sbjct: 473 RDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Query: 357 FKMMSD-EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
F MS +F++ P ++HY CM D+L+RAG L+EA +F+ + + + LL C +
Sbjct: 533 FNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTY 592
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
+N ++G +K+ LG S VLLS+ Y+A +WED +R + K RG+ K PG SW
Sbjct: 593 KNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSW 651
Query: 476 IEL 478
+++
Sbjct: 652 VDV 654
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 165/323 (51%), Gaps = 14/323 (4%)
Query: 36 SILSDLNRTEFLDTGRQVHSLAMKNGL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGN 94
S+L R+ L G+ +H +K L LS +V L LYA C ++ A F+ +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 95 K--NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR 152
N I W M+ YA + +EKAL L++ M SGV P+++T V+ AC+ L AI +G+
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG 212
+H + F +YV ++LVD YAKCG L A + F+ + + D+V W ++I+G+ +
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 213 DFEGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
+ L+ M +I+ + PN T+ + A AL +GK +H + GF+ ++ V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTK 331
+ + +YAK + +F ++ ++W+AMI G +N +A E+F +ML+
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN--- 300
Query: 332 PDTVTFVN------LLSACSHMG 348
D V V +L C+ G
Sbjct: 301 -DNVAMVTPVAIGLILMGCARFG 322
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 260/486 (53%), Gaps = 10/486 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY++ +A+ +++M + + F +L + + G VH +K
Sbjct: 78 MIRGYSNSPNPDKALIFYQEM-LRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKT 136
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V+ L+ +Y CG ++ LR FE N + W ++++G+ + A+ F
Sbjct: 137 GFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAF 196
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF--------GLQLYVLSS 172
M +GV +E +V ++ AC IV G+ HG+ LGF G + + +S
Sbjct: 197 REMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATS 256
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
L+DMYAKCG L AR F+ + + +V W SIITGY QNGD E AL ++ M I P+
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
++T SV++A G+ +HA + K GF + + AL MYAK G + F
Sbjct: 317 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVD 351
+ +D I+W +I GL+ +GHGN+AL +F +M +G PD +T++ +L ACSH+GLV+
Sbjct: 377 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 436
Query: 352 RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
G YF M D + PTVEHY CMVDILSRAG+ EA+ +++ V + +W LL G
Sbjct: 437 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Query: 412 CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEP 471
C H N ++ + E S YVLLS+IY G+W DV+L+R MK++ V K
Sbjct: 497 CDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVL 556
Query: 472 GCSWIE 477
G S +E
Sbjct: 557 GHSSVE 562
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 197/421 (46%), Gaps = 13/421 (3%)
Query: 37 ILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCG---SLDDALRTFEFSG 93
ILS L L Q+H L +K+ ++ V + L+ C +L A FE
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ 153
+ W++M+ GY+ S + +KAL + M G P FT V+ ACS L I G
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
+HG+ +K GF + +YV + L+ MY CG + R FE + Q +VV W S+I+G+V N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN-------- 265
F A+ + +MQ + NE M +L AC + GK H + GF+
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
V + ++L MYAKCG L +F MP R ++SWN++I+G SQNG +AL +F M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
L G PD VTF++++ A G G +S +V++ ++ G
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKTGD 367
Query: 386 LNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSI 445
AK+ E E + W +++ G +H + + +++ E G+ L +
Sbjct: 368 AESAKKAFEDLEKKDTIA-WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 446 Y 446
Y
Sbjct: 427 Y 427
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 282/533 (52%), Gaps = 35/533 (6%)
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLL---SIVSVANALVTLYAKCGSLDDALRT 88
F L SD+++ +Q+H+ ++ + + + ++ L + ++ A R
Sbjct: 52 FSLAETCSDMSQL------KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105
Query: 89 FEFSGNKNSITWSAMVTGYAQS-GDSEKALRLFHSMHCSG-VLPSEFTLVGVINACSDLC 146
F+ N +S W+ ++ A E+A L+ M G P + T V+ AC+ +
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
EG+Q+H +K GFG +YV + L+ +Y CG L AR+ F+ + + +V W S+I
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK---YG 263
V+ G+++ AL L+ +MQ P+ TM SVL AC+ L +L G HA +++
Sbjct: 226 ALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFD 323
++V V ++L MY KCGSL +F M RD+ SWNAMI G + +G +A+ FD
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 324 KML--LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILS 381
+M+ E +P++VTFV LL AC+H G V++G YF MM ++ I P +EHY C+VD+++
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 382 RAGKLNEAKEFIESAEVDHGLCLWRILLGGC-RNHRNYDIGAYAGEKLMELGSPE----- 435
RAG + EA + + S + +WR LL C + + ++ + +G+ E
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNI--IGTKEDNESS 462
Query: 436 ----SSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSM 491
S AYVLLS +Y + +W DV +VR++M G+ KEPGCS IE+ + H F GD+
Sbjct: 463 NGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522
Query: 492 HPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSHEIQLRV 544
HPQ +I +L+++ ++ GY P P + T D GS E LR+
Sbjct: 523 HPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATND------GSKEYSLRL 569
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 165/330 (50%), Gaps = 9/330 (2%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
+EA L+ +M E ++ +L G+QVH +K+G V V N
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPS 131
L+ LY CG LD A + F+ ++ ++W++M+ + G+ + AL+LF M S P
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPD 250
Query: 132 EFTLVGVINACSDLCAIVEGRQMHGYSLK---LGFGLQLYVLSSLVDMYAKCGSLADARR 188
+T+ V++AC+ L ++ G H + L+ + + + V +SL++MY KCGSL A +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM--QIERIIPNELTMASVLKACSSL 246
F+ +Q+ D+ W ++I G+ +G E A+N + +M + E + PN +T +L AC+
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 247 AALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNA 304
+++G+Q +++ Y + + + A+ G + + + MP + D + W +
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDT 334
++ + G + E + ++ GTK D
Sbjct: 431 LLDACCKKGASVELSEEIARNII-GTKEDN 459
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 286/558 (51%), Gaps = 43/558 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTE-FLDTGRQVHSLAMK 59
M+ G++ + E + L+ M +E + +L+ L R L G+++H +K
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL S + V NALV +Y+ CG +D A F+ ++ +W+ M++GY + + E+++ L
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 120 FHSMHCSGVLPSEFTLVGVINACS-----DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
M + V P+ TL+ V++ACS DLC +++H Y + L + ++LV
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLC-----KRVHEYVSECKTEPSLRLENALV 278
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD--------------------- 213
+ YA CG + A R F ++ DV+ WTSI+ GYV+ G+
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 214 ----------FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
F +L ++ +MQ +IP+E TM SVL AC+ L +L+ G+ + I K
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK 398
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFD 323
+V VG+AL MY KCG + +F M RD +W AM+ GL+ NG G +A+++F
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFF 458
Query: 324 KMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRA 383
+M +PD +T++ +LSAC+H G+VD+ +F M + I P++ HY CMVD+L RA
Sbjct: 459 QMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 384 GKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLS 443
G + EA E + ++ +W LLG R H + + A +K++EL + Y LL
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
Query: 444 SIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELR 503
+IY +W+D+ VRR + + K PG S IE+ H FV GD H Q +EI +L
Sbjct: 579 NIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE 638
Query: 504 LLTKLMKDEGYQPHLDSL 521
L + Y P L
Sbjct: 639 ELAQESTFAAYLPDTSEL 656
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 35/391 (8%)
Query: 35 TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAK--CGSLDDALRTFEFS 92
+ +S L + D +Q+HS ++ G+ + L + G + A + F
Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI 94
Query: 93 GNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS-DLCAIVEG 151
+ + W+ M+ G+++ + +RL+ +M GV P T ++N D A+ G
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACG 154
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQN 211
+++H + +K G G LYV ++LV MY+ CG + AR F+ + DV W +I+GY +
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
++E ++ L +M+ + P +T+ VL ACS + D K++H + + + +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGH----------------- 314
+AL YA CG +D IF M RDVISW +++ G + G+
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 315 --------------GNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
N++LE+F +M G PD T V++L+AC+H+G ++ G ++ K
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTY 393
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKE 391
D+ I V ++D+ + G +A++
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 285/503 (56%), Gaps = 48/503 (9%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGS--LDDALRTFEFSGNKNSITWSAMVTGYA 108
R+ HS A N L + N++ L S + +A + F+ + I+ +A++ +
Sbjct: 14 RKYHSSA--NAL--VTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFV 69
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
+ +A + F + C G+ P+EFT VI + + + G+Q+H Y+LK+G ++
Sbjct: 70 KESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVF 129
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
V S++++ Y K +L DARR F+ + P+VV T++I+GY++ +FE AL+L+ M ER
Sbjct: 130 VGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP-ER 188
Query: 229 ---------------------------------IIPNELTMASVLKACSSLAALDQGKQM 255
+IPNE T + A S++A+ GK +
Sbjct: 189 SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSI 248
Query: 256 HAGIIKY-GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP--TRDVISWNAMISGLSQN 312
HA IK+ G V V ++L + Y+KCG+++D L F ++ R+++SWN+MI G + N
Sbjct: 249 HACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHN 308
Query: 313 GHGNKALELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTV- 370
G G +A+ +F+KM+ + +P+ VT + +L AC+H GL+ G+ YF +++D P +
Sbjct: 309 GRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLL 367
Query: 371 --EHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKL 428
EHYACMVD+LSR+G+ EA+E I+S +D G+ W+ LLGGC+ H N + A K+
Sbjct: 368 ELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKI 427
Query: 429 MELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVG 488
+EL + S+YV+LS+ Y+A+ W++V L+RR MK G+ + GCSWIE++ + VFV
Sbjct: 428 LELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNA 487
Query: 489 DSMHPQIDEIRSELRLLTKLMKD 511
D + DE+ L L+++ +++
Sbjct: 488 DKNNELKDEVYRMLALVSQHLEE 510
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 197/438 (44%), Gaps = 77/438 (17%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
EA + F+++ C NEF +++ + + G+Q+H A+K GL S V V +A+
Sbjct: 76 EASQAFKRLLCLGIR-PNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAV 134
Query: 73 VTLYAKCGSLDDALRTFEFSGNKN-------------------------------SITWS 101
+ Y K +L DA R F+ + + N +TW+
Sbjct: 135 LNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWN 194
Query: 102 AMVTGYAQSGDSEKALRLFHSMHCSG-VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
A++ G++Q+G +E+A+ F M G V+P+E T I A S++ + G+ +H ++K
Sbjct: 195 AVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIK 254
Query: 161 -LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV--QQPDVVLWTSIITGYVQNGDFEGA 217
LG ++V +SL+ Y+KCG++ D+ F + +Q ++V W S+I GY NG E A
Sbjct: 255 FLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEA 314
Query: 218 LNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG---FN-------- 265
+ ++ KM + + PN +T+ VL AC+ HAG+I+ G FN
Sbjct: 315 VAMFEKMVKDTNLRPNNVTILGVLFACN-----------HAGLIQEGYMYFNKAVNDYDD 363
Query: 266 ---LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS-WNAMISGLSQNGHGNKAL-E 320
LE+ + + M ++ G + + MP I W A++ G H NK L +
Sbjct: 364 PNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQI--HSNKRLAK 421
Query: 321 LFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC----- 375
L +LE D ++V L +A S M W ++ + T C
Sbjct: 422 LAASKILELDPRDVSSYVMLSNAYSAM----ENWQNVSLIRRKMKETGLKRFTGCSWIEV 477
Query: 376 --MVDILSRAGKLNEAKE 391
+ + A K NE K+
Sbjct: 478 RDQIRVFVNADKNNELKD 495
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 12/217 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ G++ G +EA+ F M E NE ++ ++ G+ +H+ A+K
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF 255
Query: 61 -GLLSIVSVANALVTLYAKCGSLDDALRTFEF--SGNKNSITWSAMVTGYAQSGDSEKAL 117
G V V N+L++ Y+KCG+++D+L F +N ++W++M+ GYA +G E+A+
Sbjct: 256 LGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAV 315
Query: 118 RLFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEG-----RQMHGYSLKLGFGLQLYVLS 171
+F M + + P+ T++GV+ AC+ I EG + ++ Y L+ Y +
Sbjct: 316 AMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY--A 373
Query: 172 SLVDMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITG 207
+VDM ++ G +A + + P + W +++ G
Sbjct: 374 CMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 284/516 (55%), Gaps = 11/516 (2%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
E+IELF + +E +E S ++ + ++ GRQ H KN + + N+L
Sbjct: 300 ESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSL 359
Query: 73 VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSE 132
+ +Y++CGS+ + F ++ ++W+ M++ + Q+G ++ L L + M G
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 419
Query: 133 FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE- 191
T+ +++A S+L G+Q H + ++ G + + S L+DMY+K G + +++ FE
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG 478
Query: 192 --YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
Y ++ D W S+I+GY QNG E ++ KM + I PN +T+AS+L ACS + ++
Sbjct: 479 SGYAER-DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSV 537
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
D GKQ+H I+ + V V SAL MY+K G++ +F + R+ +++ MI G
Sbjct: 538 DLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGY 597
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
Q+G G +A+ LF M G KPD +TFV +LSACS+ GL+D G F+ M + ++I P+
Sbjct: 598 GQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPS 657
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC-LWRILLGGCRNHRNYDIGAYAGEKL 428
EHY C+ D+L R G++NEA EF++ + + LW LLG C+ H ++ E+L
Sbjct: 658 SEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERL 717
Query: 429 MEL--GSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFV 486
+ G S VLLS++Y +W+ V+ VRR M+ +G+ KE G S IE+ V+ FV
Sbjct: 718 AKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFV 777
Query: 487 VGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLP 522
D HP EI + L K M+ + + L +LP
Sbjct: 778 SRDQEHPHSSEIYDVIDGLAKDMRGDSF---LTTLP 810
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 227/472 (48%), Gaps = 15/472 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGE-NEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
++ G+ L EA+ + +M+ + + +S L T+ L G+ VH ++
Sbjct: 76 IIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIR 135
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDAL------RTFEFSGNKNSITWSAMVTGYAQSGDS 113
S V N+L+ +Y C + D + F+ KN + W+ +++ Y ++G +
Sbjct: 136 CLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRN 195
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG--FGLQLYVLS 171
+A R F M V PS + V V A S +I + +G LKLG + L+V+S
Sbjct: 196 AEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVS 255
Query: 172 SLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLY-GKMQIERII 230
S + MYA+ G + +RR F+ + ++ +W ++I YVQN ++ L+ + + I+
Sbjct: 256 SAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIV 315
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
+E+T A S+L ++ G+Q H + K L + + ++L MY++CGS+ + +
Sbjct: 316 SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F M RDV+SWN MIS QNG ++ L L +M +G K D +T LLSA S++
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 351 DRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE-SAEVDHGLCLWRILL 409
+ G + + + Y ++D+ S++G + +++ E S + W ++
Sbjct: 436 EIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 410 GGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRM 461
G + + + K++E ++ V ++SI A Q V+L +++
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNA--VTVASILPACSQIGSVDLGKQL 543
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN--ELTMASVLKAC 243
AR+ F+ + +P VLW +II G++ N AL Y +M+ N T +S LKAC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 244 SSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY------LIFWRMPTR 297
+ L GK +H +I+ N V ++L MY C + D + +F M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
+V++WN +IS + G +A F M+ KP V+FVN+ A S + + ++
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 358 KMM--------SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
+M D F ++ + YA + DI E+ + + V+ + +W ++
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSCVERNIEVWNTMI 289
Query: 410 GGCRNHRNYDIGAYAGEKLME-LGSPE----SSAYVLLSSIYTALGQWE 453
G + D + E +E +GS E Y+L +S +AL Q E
Sbjct: 290 GV---YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVE 335
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 286/525 (54%), Gaps = 9/525 (1%)
Query: 29 ENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAK--CGSLDDAL 86
E V+ +L N + L R++HS + NGL S+ N L+ A GSL A
Sbjct: 3 EKARVIVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQ 59
Query: 87 RTFE-FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV-LPSEFTLVGVINACSD 144
F+ F + ++ W+ ++ G++ S ++ ++ M S V P FT + +C
Sbjct: 60 LLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCER 119
Query: 145 LCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSI 204
+ +I + ++HG ++ GF V +SLV Y+ GS+ A + F+ + D+V W +
Sbjct: 120 IKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVM 179
Query: 205 ITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF 264
I + G AL++Y +M E + + T+ ++L +C+ ++AL+ G +H
Sbjct: 180 ICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRC 239
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
V V +AL MYAKCGSL++ +F M RDV++WN+MI G +GHG +A+ F K
Sbjct: 240 ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAG 384
M+ G +P+ +TF+ LL CSH GLV G ++F++MS +F +TP V+HY CMVD+ RAG
Sbjct: 300 MVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAG 359
Query: 385 KLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSS 444
+L + E I ++ LWR LLG C+ HRN ++G A +KL++L + + YVL++S
Sbjct: 360 QLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTS 419
Query: 445 IYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRL 504
IY+A + +R+++++ + PG SWIE+ VH FVV D MHP+ I SEL
Sbjct: 420 IYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGE 479
Query: 505 LTKLMKDEGYQPHLDSLPESETTGDD-LGDQEGSHEIQLRVCGGV 548
+ GY+P DS + T D LG + SH +L + G+
Sbjct: 480 VINRAILAGYKPE-DSNRTAPTLSDRCLGSADTSHSEKLAIAYGL 523
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 152/309 (49%), Gaps = 4/309 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ G+++ +I + +M + F L R + + ++H +++
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G L VA +LV Y+ GS++ A + F+ ++ ++W+ M+ ++ G +AL ++
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M GV +TLV ++++C+ + A+ G +H + + ++V ++L+DMYAKC
Sbjct: 197 KRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKC 256
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
GSL +A F +++ DV+ W S+I GY +G A++ + KM + PN +T +L
Sbjct: 257 GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGS--ALSAMYAKCGSLDDGY-LIFWRMPTR 297
CS + +G + H I+ F+L V + +Y + G L++ +I+
Sbjct: 317 LGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE 375
Query: 298 DVISWNAMI 306
D + W ++
Sbjct: 376 DPVLWRTLL 384
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 281/529 (53%), Gaps = 42/529 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY G+ EA LF +M NE T + L +D R+++ +
Sbjct: 116 MVKGYMQEGMVGEAESLFWRM-----PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK 170
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+++ ++ L + G +D+A F+ +N +TW+ M+TGY Q+ + A +LF
Sbjct: 171 DVVASTNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 121 HSMHCSGVLPSE-----------FTLVGVINACSDLCAIVEGRQMHG-YSLKLGFGLQLY 168
V+P + +TL G I + ++ + + ++ +GFG
Sbjct: 227 E------VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG---- 276
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
+ G ++ ARR F+ ++ D W +I Y + G AL+L+ +MQ +
Sbjct: 277 ----------EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
+ P+ ++ S+L C++LA+L G+Q+HA +++ F+ +V V S L MY KCG L
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAK 386
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
L+F R ++D+I WN++ISG + +G G +AL++F +M GT P+ VT + +L+ACS+ G
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRIL 408
++ G + F+ M +F +TPTVEHY+C VD+L RAG++++A E IES + +W L
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 409 LGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVA 468
LG C+ H D+ A +KL E + YVLLSSI + +W DV +VR+ M+ V+
Sbjct: 507 LGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVS 566
Query: 469 KEPGCSWIELKSLVHVFVVGD-SMHPQIDEIRSELRLLTKLMKDEGYQP 516
K PGCSWIE+ VH+F G HP+ I L L+++ GY P
Sbjct: 567 KFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSP 615
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 177/417 (42%), Gaps = 62/417 (14%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGY S GL KEA +LF++M + R V S
Sbjct: 54 IVSGYFSNGLPKEARQLFDEM---------------------------SERNVVSW---- 82
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
N LV+ Y K + +A FE +N ++W+AMV GY Q G +A LF
Sbjct: 83 ---------NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS-LVDMYAK 179
M + G+I+ +GR L ++ V S+ ++ +
Sbjct: 134 WRMPERNEVSWTVMFGGLID---------DGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G + +AR F+ +++ +VV WT++ITGY QN + A L+ M + E++ S+
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSM 240
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L + ++ ++ + V +A+ + + G + +F M RD
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDN 296
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFK 358
+W MI + G +AL+LF +M +G +P + +++LS C+ + + G +
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
++ +FD V + ++ + + G+L +AK + + +W ++ G +H
Sbjct: 357 LVRCQFDDDVYVA--SVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASH 410
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 59/335 (17%)
Query: 73 VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSE 132
++ ++ G +++A + F+ K +W+++V+GY +G ++A +LF M SE
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM-------SE 76
Query: 133 FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY 192
+V + LV Y K + +AR FE
Sbjct: 77 RNVVS--------------------------------WNGLVSGYIKNRMIVEARNVFEL 104
Query: 193 VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG 252
+ + +VV WT+++ GY+Q G A +L+ +M ER NE++ + +D+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP-ER---NEVSWTVMFGGLIDDGRIDKA 160
Query: 253 KQMHAGI-IKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ 311
++++ + +K +V + + + G +D+ LIF M R+V++W MI+G Q
Sbjct: 161 RKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 312 NGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
N + A +LF+ M + V++ ++L + G ++ ++F++M + P +
Sbjct: 216 NNRVDVARKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPVIA 267
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR 406
A +V G++++A+ + E D WR
Sbjct: 268 CNAMIVG-FGEVGEISKARRVFDLME-DRDNATWR 300
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 169/488 (34%), Positives = 263/488 (53%), Gaps = 9/488 (1%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCG------SLDDALRTFEFSGN 94
L R +D +QVH+ +K L S + + V AKC S++ A F +
Sbjct: 37 LKRCHNIDEFKQVHARFIKLSLFYSSSFSASSV--LAKCAHSGWENSMNYAASIFRGIDD 94
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
+ ++ M+ GY E+AL ++ M G P FT ++ AC+ L +I EG+Q+
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG KLG ++V +SL++MY +CG + + FE ++ W+S+++ G +
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 215 EGALNLYGKMQIERIIPNELT-MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
L L+ M E + E + M S L AC++ AL+ G +H +++ L + V ++
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L MY KCG LD IF +M R+ ++++AMISGL+ +G G AL +F KM+ EG +PD
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 334 TVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
V +V++L+ACSH GLV G F M E + PT EHY C+VD+L RAG L EA E I
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 394 ESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWE 453
+S ++ +WR L CR +N ++G A ++L++L S Y+L+S++Y+ W+
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWD 454
Query: 454 DVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEG 513
DV R + +G+ + PG S +ELK H FV D HP+ EI L + +K EG
Sbjct: 455 DVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEG 514
Query: 514 YQPHLDSL 521
Y P L +
Sbjct: 515 YSPDLTQI 522
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 145/264 (54%), Gaps = 2/264 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY ++ +EA+ + +M E +N F +L R + + G+Q+H K
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDN-FTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL + V V N+L+ +Y +CG ++ + FE +K + +WS+MV+ A G + L LF
Sbjct: 162 GLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLF 221
Query: 121 HSMHCSGVLPSEFT-LVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M L +E + +V + AC++ A+ G +HG+ L+ L + V +SLVDMY K
Sbjct: 222 RGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVK 281
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG L A F+ +++ + + ++++I+G +G+ E AL ++ KM E + P+ + SV
Sbjct: 282 CGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSV 341
Query: 240 LKACSSLAALDQGKQMHAGIIKYG 263
L ACS + +G+++ A ++K G
Sbjct: 342 LNACSHSGLVKEGRRVFAEMLKEG 365
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S A +G+ E + LF M E E + S L T L+ G +H ++N
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ V +LV +Y KCG LD AL F+ +N++T+SAM++G A G+ E ALR+F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG-FGLQLYVLSSLVDMYAK 179
M G+ P V V+NACS + EGR++ LK G LVD+ +
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 180 CGSLADARRGFEYVQ-QPDVVLWTSIIT 206
G L +A + + + + V+W + ++
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 287/530 (54%), Gaps = 16/530 (3%)
Query: 12 KEAIELFE--QMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA 69
+EA ELFE ++RC + G + + +++ R + + ++V+ M NG +
Sbjct: 104 REAFELFEILEIRCSFKVGVSTY--DALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N ++ ++ KCG + DA R F+ +N ++ ++++G+ G+ +A LF M
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
T ++ A + L +I G+Q+H +LKLG +V L+DMY+KCG + DAR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
FE + + V W ++I GY +G E AL L M+ + ++ T++ +++ + LA L
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
+ KQ HA +I+ GF E+ +AL Y+K G +D +F ++P +++ISWNA++ G
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
+ +G G A++LF+KM+ P+ VTF+ +LSAC++ GL ++GW+ F MS+ I P
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM 429
HYACM+++L R G L+EA FI A + + +W LL CR N ++G EKL
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLY 521
Query: 430 ELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGD 489
+G + YV++ ++Y ++G+ + V ++++G++ P C+W+E+ H F+ GD
Sbjct: 522 GMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
Query: 490 -----------SMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTG 528
++ ++DE+ E+ +++ P +D E E G
Sbjct: 582 RFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDE-KEEERVG 630
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 158/310 (50%), Gaps = 3/310 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG+ + G EA ELF+ M E + E +L + G+Q+H A+K
Sbjct: 195 IISGFVNFGNYVEAFELFKMMWEELSDCETH-TFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G++ V+ L+ +Y+KCG ++DA FE K ++ W+ ++ GYA G SE+AL L
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLL 313
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M SGV +FTL +I + L + +Q H ++ GF ++ ++LVD Y+K
Sbjct: 314 YDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKW 373
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + AR F+ + + +++ W +++ GY +G A+ L+ KM + PN +T +VL
Sbjct: 374 GRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVL 433
Query: 241 KACSSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
AC+ +QG ++ + + +G + + + + G LD+ R P +
Sbjct: 434 SACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTT 493
Query: 300 IS-WNAMISG 308
++ W A+++
Sbjct: 494 VNMWAALLNA 503
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 277/506 (54%), Gaps = 8/506 (1%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKC---GSLDDALRTFEFSGNKNSITWSAMVTGY 107
RQ+H+L ++ L+ V + ++ A ++ + R F N + M+ +
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 108 AQSGDSEKALRLFHSMHCSGVLPSE-FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
+ S + RLF S+ + LP+ + + C ++ G Q+HG GF
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 147
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
++++L+D+Y+ C + DA + F+ + + D V W + + Y++N L L+ KM+
Sbjct: 148 SLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN 207
Query: 227 ER---IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGS 283
+ + P+ +T L+AC++L ALD GKQ+H I + G + + + + L +MY++CGS
Sbjct: 208 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 284 LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+D Y +F+ M R+V+SW A+ISGL+ NG G +A+E F++ML G P+ T LLSA
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 344 CSHMGLVDRGWDYF-KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
CSH GLV G +F +M S EF I P + HY C+VD+L RA L++A I+S E+
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 387
Query: 403 CLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMM 462
+WR LLG CR H + ++G L+EL + E+ YVLL + Y+ +G+WE V +R +M
Sbjct: 388 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 447
Query: 463 KARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLP 522
K + + +PGCS IEL+ VH F+V D HP+ +EI L + + +K GY + S
Sbjct: 448 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSEL 507
Query: 523 ESETTGDDLGDQEGSHEIQLRVCGGV 548
+ + ++ G H +L + G+
Sbjct: 508 HNLESEEEKGYALRYHSEKLAIAFGI 533
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 10/309 (3%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
E LF +R N + L ++ L G Q+H +G LS + L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 73 VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCS---GVL 129
+ LY+ C + DA + F+ +++++W+ + + Y ++ + L LF M V
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P T + + AC++L A+ G+Q+H + + G L + ++LV MY++CGS+ A +
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F +++ +VV WT++I+G NG + A+ + +M I P E T+ +L ACS +
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLV 334
Query: 250 DQG----KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNA 304
+G +M +G K NL G + + + LD Y + M + D W
Sbjct: 335 AEGMMFFDRMRSGEFKIKPNLH-HYGCVVD-LLGRARLLDKAYSLIKSMEMKPDSTIWRT 392
Query: 305 MISGLSQNG 313
++ +G
Sbjct: 393 LLGACRVHG 401
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMR-----CEEEEGENEFVLTSILSDLNRTEFLDTGRQVHS 55
+ S Y ++ + LF++M+ C + +G + ++L LD G+QVH
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGA---LDFGKQVHD 241
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEK 115
+NGL ++++N LV++Y++CGS+D A + F +N ++W+A+++G A +G ++
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR----QMHGYSLKLGFGLQLYVLS 171
A+ F+ M G+ P E TL G+++ACS + EG +M K+ L Y
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHY--G 359
Query: 172 SLVDMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFE 215
+VD+ + L A + ++ +PD +W +++ +GD E
Sbjct: 360 CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 277/553 (50%), Gaps = 78/553 (14%)
Query: 33 VLTSILSDLNRTEFLDTGRQVHS------LAMKNGLLSIVSVANALVTLYAKCGSLDDAL 86
+L S+L T+ L G+ +H N LLS N L+ +Y KCG DA
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLS-----NHLIGMYMKCGKPIDAC 102
Query: 87 RTFE-------FSGN------------------------KNSITWSAMVTGYAQSGDSEK 115
+ F+ +S N ++ ++W+ MV GYAQ G+ +
Sbjct: 103 KVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHE 162
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
AL + SG+ +EF+ G++ AC + RQ HG L GF + + S++D
Sbjct: 163 ALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIID 222
Query: 176 MYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGA------------------ 217
YAKCG + A+R F+ + D+ +WT++I+GY + GD E A
Sbjct: 223 AYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTAL 282
Query: 218 -------------LNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF 264
L+L+ KM + P + T +S L A +S+A+L GK++H +I+
Sbjct: 283 IAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNV 342
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRM--PTRDVISWNAMISGLSQNGHGNKALELF 322
V S+L MY+K GSL+ +F R+ D + WN MIS L+Q+G G+KAL +
Sbjct: 343 RPNAIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
D M+ +P+ T V +L+ACSH GLV+ G +F+ M+ + I P EHYAC++D+L R
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 383 AGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLL 442
AG E IE + +W +LG CR H N ++G A ++L++L S+ Y+LL
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILL 521
Query: 443 SSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGD--SMHPQIDEIRS 500
SSIY G+WE VE +R +MK R V KE SWIE++ V F V D H + +EI
Sbjct: 522 SSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYF 581
Query: 501 ELRLLTKLMKDEG 513
L L ++++E
Sbjct: 582 ILHNLAAVIEEEA 594
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 160/378 (42%), Gaps = 66/378 (17%)
Query: 102 AMVTGYAQSGDSEKALRLFHSMHCSGV-LPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
+ ++ +A + +A+ S+ G+ LP + L ++ C D ++ +G+ +H +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 161 LGFGLQLYVLSS-LVDMYAKCGS-------------------------------LADARR 188
GF +LS+ L+ MY KCG L AR
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA 248
F+ + + DVV W +++ GY Q+G+ AL Y + + I NE + A +L AC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD---------------------DG 287
L +Q H ++ GF V + ++ YAKCG ++ G
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 288 YL----------IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
Y +F MP ++ +SW A+I+G + G GN+AL+LF KM+ G KP+ TF
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
+ L A + + + G + M ++ P + ++D+ S++G L ++ +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 398 VDHGLCLWRILLGGCRNH 415
H W ++ H
Sbjct: 374 DKHDCVFWNTMISALAQH 391
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 280/513 (54%), Gaps = 5/513 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S Y +++A+ F +M E N L S+LS + G+ VH A++
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIE-PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Query: 61 GL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
L + S++ ALV LYA+CG L D ++N + W+++++ YA G +AL L
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M + P FTL I+AC + + G+Q+HG+ ++ + +V +SL+DMY+K
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSK 451
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
GS+ A F ++ VV W S++ G+ QNG+ A++L+ M + NE+T +V
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
++ACSS+ +L++GK +H +I G ++ +AL MYAKCG L+ +F M +R +
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSI 570
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW++MI+ +G A+ F++M+ GTKP+ V F+N+LSAC H G V+ G YF +
Sbjct: 571 VSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNL 630
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M F ++P EH+AC +D+LSR+G L EA I+ +W L+ GCR H+ D
Sbjct: 631 MK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMD 689
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
I L ++ + ++ Y LLS+IY G+WE+ +R MK+ + K PG S IE+
Sbjct: 690 IIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE 512
V F G+ Q DEI L L L +E
Sbjct: 750 QKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 216/417 (51%), Gaps = 20/417 (4%)
Query: 10 LAKEAIELFEQMRCEEEEGENEFVLTSILSDL-NRTEFLDTGRQVHSLAMKNGLLSIVSV 68
L AI+L+ ++ E + ++FV S+L E L G +VH +K G+ +
Sbjct: 80 LLDAAIDLYHRLVSETTQ-ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 69 ANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
+L+ +Y + G+L DA + F+ ++ + WS +V+ ++G+ KALR+F M GV
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
P T++ V+ C++L + R +HG + F L + +SL+ MY+KCG L + R
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDF-EGALNLYGKMQIERIIPNELTMASVLKACSSLA 247
FE + + + V WT++I+ Y G+F E AL + +M I PN +T+ SVL +C +
Sbjct: 259 IFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGS-ALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMI 306
+ +GK +H ++ + S AL +YA+CG L D + + R++++WN++I
Sbjct: 318 LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLI 377
Query: 307 SGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM-----MS 361
S + G +AL LF +M+ + KPD T + +SAC + GLV G +S
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 362 DEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH-GLCLWRILLGGCRNHRN 417
DEF V++ ++D+ S++G ++ A ++ H + W +L G + N
Sbjct: 438 DEF-----VQN--SLIDMYSKSGSVDSASTVFN--QIKHRSVVTWNSMLCGFSQNGN 485
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
Query: 138 VINACSDLCAIVEGRQMHGYSLKLG-FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP 196
+ +CS L + Q+H + L G ++ L++ YA GS +R FE P
Sbjct: 7 LFRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS-SLAALDQGKQM 255
D ++ +I V + A++LY ++ E ++ SVL+AC+ S L G ++
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHG 315
H IIK G + + + ++L MY + G+L D +F MP RD+++W+ ++S +NG
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
KAL +F M+ +G +PD VT ++++ C+ +G
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 269/513 (52%), Gaps = 37/513 (7%)
Query: 26 EEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDA 85
E EN F+ L R + + +++++ + +GL + +V K +D A
Sbjct: 7 REVENYFI-----PFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYA 61
Query: 86 LRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM-HCSGVLPSEFTLVGVINACSD 144
R F N N +++++ Y + +R++ + S LP FT + +C+
Sbjct: 62 TRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCAS 121
Query: 145 LCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSI 204
L + G+Q+HG+ K G + ++L+DMY K L DA + F+ + + DV+ W S+
Sbjct: 122 LGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSL 181
Query: 205 ITGYVQNGDFEGA-------------------------------LNLYGKMQIERIIPNE 233
++GY + G + A ++ + +MQ+ I P+E
Sbjct: 182 LSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
+++ SVL +C+ L +L+ GK +H + GF + V +AL MY+KCG + +F +
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
M +DVISW+ MISG + +G+ + A+E F++M KP+ +TF+ LLSACSH+G+ G
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Query: 354 WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCR 413
YF MM ++ I P +EHY C++D+L+RAGKL A E ++ + +W LL CR
Sbjct: 362 LRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR 421
Query: 414 NHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGC 473
N D+ A + L+EL + YVLL++IY LG+WEDV +R+M++ + K PG
Sbjct: 422 TPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGG 481
Query: 474 SWIELKSLVHVFVVGDSMHPQIDEIRSELRLLT 506
S IE+ ++V FV GD+ P EI L+L T
Sbjct: 482 SLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFT 514
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 13/225 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY +G EA++ F +M+ E +E L S+L + L+ G+ +H A +
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIE-PDEISLISVLPSCAQLGSLELGKWIHLYAERR 270
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G L V NAL+ +Y+KCG + A++ F K+ I+WS M++GYA G++ A+ F
Sbjct: 271 GFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETF 330
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ---MHGYSLKLGFGLQLYVLSSLVDMY 177
+ M + V P+ T +G+++ACS + EG + M ++ ++ Y L+D+
Sbjct: 331 NEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHY--GCLIDVL 388
Query: 178 AKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGAL 218
A+ G L R E + +PD +W S+++ G+ + AL
Sbjct: 389 ARAGKL---ERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 265/490 (54%), Gaps = 34/490 (6%)
Query: 51 RQVHSLAMKNGLLS-IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
+Q+H+ +K GL+S V+ + L A ++ A F +KN W+ ++ G+++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 110 SGDSEKALRLFHSMHCSG--VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL 167
S E A+ +F M CS V P T V A L +GRQ+HG +K G
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 168 YVLSSLVDMYAKCGSLADARR------GFEYV-------------------------QQP 196
++ ++++ MY CG L +A R GF+ V Q
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
+ V W S+I+G+V+NG F+ AL+++ +MQ + + P+ TM S+L AC+ L A +QG+ +H
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGN 316
I++ F L V +AL MY KCG +++G +F P + + WN+MI GL+ NG
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 317 KALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACM 376
+A++LF ++ G +PD+V+F+ +L+AC+H G V R ++F++M +++ I P+++HY M
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 377 VDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPES 436
V++L AG L EA+ I++ V+ +W LL CR N ++ A + L +L E+
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 437 SAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQID 496
YVLLS+ Y + G +E+ R +MK R + KE GCS IE+ VH F+ HP+
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSA 521
Query: 497 EIRSELRLLT 506
EI S L +L
Sbjct: 522 EIYSLLDILN 531
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 179/402 (44%), Gaps = 45/402 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENE-FVLTSILSDLNRTEFLDTGRQVHSLAMK 59
++ G++ + AI +F M C + + S+ R GRQ+H + +K
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ---------- 109
GL + N ++ +Y CG L +A R F + + W++M+ G+A+
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 110 ---------------------SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
+G + AL +F M V P FT+V ++NAC+ L A
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
+GR +H Y ++ F L V+++L+DMY KCG + + FE + + W S+I G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
NG E A++L+ +++ + P+ ++ VL AC+ + + + ++K + +E
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR-LMKEKYMIEP 393
Query: 269 PVG--SALSAMYAKCGSLDDGYLIFWRMPT-RDVISWNAMISGLSQNGH---GNKALELF 322
+ + + + G L++ + MP D + W++++S + G+ +A +
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCL 453
Query: 323 DKMLLEGTKPD-TVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
K+ PD T +V L +A + GL + + +M +
Sbjct: 454 KKL-----DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 248/438 (56%), Gaps = 9/438 (2%)
Query: 33 VLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFS 92
+ S+L +D G +VH L L + + +++ LV LYA CG + A F+
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 93 GNKNS--ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVE 150
++S W+++++GYA+ G E A+ L+ M GV P FT V+ AC + ++
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G +H +K GFG +YVL++LV MYAKCG + AR F+ + D V W S++TGY+
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
+G AL+++ M I P+++ ++SVL + + + G+Q+H +I+ G E+ V
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
+AL +Y+K G L IF +M RD +SWNA+IS S+N +G L+ F++M
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANA 387
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK 390
KPD +TFV++LS C++ G+V+ G F +MS E+ I P +EHYACMV++ RAG + EA
Sbjct: 388 KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
Query: 391 EFI-ESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTAL 449
I + ++ G +W LL C H N DIG A ++L EL + LL IY+
Sbjct: 448 SMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKA 507
Query: 450 GQWEDVELVRRMMKARGV 467
+ EDVE VR+MM RG+
Sbjct: 508 KRAEDVERVRQMMVDRGL 525
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 153/289 (52%), Gaps = 8/289 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGYA LG ++A+ L+ QM E+ + F +L + G +H +K
Sbjct: 166 LISGYAELGQYEDAMALYFQM-AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V V NALV +YAKCG + A F+ +K+ ++W++M+TGY G +AL +F
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF 284
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M +G+ P + + V+ + + + GRQ+HG+ ++ G +L V ++L+ +Y+K
Sbjct: 285 RLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKR 341
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G L A F+ + + D V W +II+ + +N + L + +M P+ +T SVL
Sbjct: 342 GQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVL 398
Query: 241 KACSSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGY 288
C++ ++ G+++ + + K YG + ++ + + +Y + G +++ Y
Sbjct: 399 SLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 178/587 (30%), Positives = 283/587 (48%), Gaps = 75/587 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+L S GL + A+EL+ MR G+ ++L IL R H+ ++
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGDG-YILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL + V N L+TLY K G + DA F +N ++W+ M+ G++Q D E A+++F
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 121 HSMHCSGVLPSEFTLVGVIN-----------------------------------ACSDL 145
M P E T V++ C++L
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL 307
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSII 205
A+ ++HGY +K GF L ++L+ +Y K G + DA F ++ + W S+I
Sbjct: 308 EALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLI 367
Query: 206 TGYVQNGDFEGALNLYG---------------------------------------KMQI 226
T +V G + AL+L+ +MQ
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
+++ N +T+ +L C+ L AL+ G+++H +I+ + + V +AL MYAKCG L +
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
G L+F + +D+ISWN++I G +G KAL +FD+M+ G PD + V +LSACSH
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSH 547
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR 406
GLV++G + F MS F + P EHYAC+VD+L R G L EA E +++ ++ +C+
Sbjct: 548 AGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLG 607
Query: 407 ILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARG 466
LL CR H+N DI +L L + +Y+LLS+IY+A G+WE+ VR + K +
Sbjct: 608 ALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKD 667
Query: 467 VAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEG 513
+ K G SWIE+K + F G + + + I L L M +G
Sbjct: 668 LKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 171/384 (44%), Gaps = 44/384 (11%)
Query: 51 RQVHS-LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGN---KNSITWSAMVTG 106
RQVH+ + + + + S+A L+++YA+ G L DA FE + W++++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 107 YAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
G E AL L+ M G+ + L ++ AC L R H +++G
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
L+V++ L+ +Y K G + DA F + + + W +I G+ Q D E A+ ++ MQ
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 227 ERIIPNELTMASVL-----------------------------------KACSSLAALDQ 251
E P+E+T SVL C+ L AL
Sbjct: 253 EEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSI 312
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ 311
+++H +IK GF +P +AL +Y K G + D +F ++ + + SWN++I+
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 312 NGHGNKALELFDKM----LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
G ++AL LF ++ + K + VT+ +++ C+ G D +YF+ M +
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 368 PTVEHYACMVDILSRAGKLNEAKE 391
+V C++ I + LN +E
Sbjct: 433 NSVT-ICCILSICAELPALNLGRE 455
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 259/449 (57%), Gaps = 6/449 (1%)
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEF 91
F + + + G+Q+H + K G + V N+LV Y CG +A + F
Sbjct: 107 FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGE 166
Query: 92 SGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEG 151
++ ++W+ ++TG+ ++G ++AL F M V P+ T V V+ + + + G
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLG 223
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQN 211
+ +HG LK + L ++L+DMY KC L+DA R F +++ D V W S+I+G V
Sbjct: 224 KGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC 283
Query: 212 GDFEGALNLYGKMQIER-IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
+ A++L+ MQ I P+ + SVL AC+SL A+D G+ +H I+ G + +
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHI 343
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
G+A+ MYAKCG ++ IF + +++V +WNA++ GL+ +GHG ++L F++M+ G
Sbjct: 344 GTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGF 403
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYF-KMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
KP+ VTF+ L+AC H GLVD G YF KM S E+++ P +EHY CM+D+L RAG L+EA
Sbjct: 404 KPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEA 463
Query: 390 KEFIESAEVDHGLCLWRILLGGCRNHRNY-DIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
E +++ V + + +L C+N ++ + +++ +S YVLLS+I+ A
Sbjct: 464 LELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAA 523
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIE 477
+W+DV +RR+MK +G++K PG S+IE
Sbjct: 524 NRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 181/387 (46%), Gaps = 18/387 (4%)
Query: 37 ILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK- 95
+L ++R L +Q+ + + LL + N +VT K S
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 96 -NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
+S +++ +++ YA + + + +G P FT V AC I EG+Q+
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
HG K+GF +YV +SLV Y CG +A + F + DVV WT IITG+ + G +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
+ AL+ + KM +E PN T VL + + L GK +H I+K + + G+AL
Sbjct: 189 KEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 275 SAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLL-EGTKPD 333
MY KC L D +F + +D +SWN+MISGL +A++LF M G KPD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 334 TVTFVNLLSACSHMGLVDRG-WDYFKMMSDEFDITPTVE---HY-ACMVDILSRAGKLNE 388
++LSAC+ +G VD G W + E+ +T ++ H +VD+ ++ G +
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVH------EYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNH 415
A E + W LLGG H
Sbjct: 360 ALEIFNGIR-SKNVFTWNALLGGLAIH 385
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG +KEAI+LF M+ + +LTS+LS +D GR VH +
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ + A+V +YAKCG ++ AL F +KN TW+A++ G A G ++LR F
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGR----QMHGYSLKLGFGLQLYVLSSLVDM 176
M G P+ T + +NAC + EGR +M L L+ Y ++D+
Sbjct: 396 EEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY--GCMIDL 453
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNG 212
+ G L +A E V+ +PDV + +I++ G
Sbjct: 454 LCRAGLLDEA---LELVKAMPVKPDVRICGAILSACKNRG 490
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 265/510 (51%), Gaps = 39/510 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY G ++ LF +MR E + N L + G Q+H L +
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L + + N+L+++Y+K G + +A F NK+S++W++++TG Q +A LF
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G+ M ++ ++ ++
Sbjct: 365 EKM--------------------------PGKDMVSWT-------------DMIKGFSGK 385
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G ++ F + + D + WT++I+ +V NG +E AL + KM + + PN T +SVL
Sbjct: 386 GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
A +SLA L +G Q+H ++K ++ V ++L +MY KCG+ +D Y IF + +++
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
S+N MISG S NG G KAL+LF + G +P+ VTF+ LLSAC H+G VD GW YFK M
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
++I P +HYACMVD+L R+G L++A I + +W LL + H D+
Sbjct: 566 KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
A +KL+EL ++ YV+LS +Y+ +G+ D + + + K++ + K+PG SWI LK
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
VH F+ GD ++EI L+++ K M+
Sbjct: 686 EVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 160/317 (50%), Gaps = 28/317 (8%)
Query: 63 LSIVSVANALVT--LYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL- 119
+ + + NA++T + KC L A F KN+++++ M+TG+ ++G ++A L
Sbjct: 109 VRVTTSYNAMITAMIKNKC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY 167
Query: 120 ------FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL 173
F S VL S + G N R G ++K ++ SS+
Sbjct: 168 AETPVKFRDSVASNVLLSGYLRAGKWNEAV--------RVFQGMAVK-----EVVSCSSM 214
Query: 174 VDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPN 232
V Y K G + DAR F+ + + +V+ WT++I GY + G FE L+ +M+ E + N
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVN 274
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
T+A + KAC +G Q+H + + ++ +G++L +MY+K G + + +F
Sbjct: 275 SNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFG 334
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
M +D +SWN++I+GL Q ++A ELF+KM D V++ +++ S G + +
Sbjct: 335 VMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEISK 390
Query: 353 GWDYFKMMSDEFDITPT 369
+ F MM ++ +IT T
Sbjct: 391 CVELFGMMPEKDNITWT 407
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 164/407 (40%), Gaps = 100/407 (24%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILS--DLNR--------------- 43
M+S YA G +A ++F++M N + I + DL +
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 44 -----TEFLDTGR--QVHSLAMKNGLLSIVSVA-NALVTLYAKCGSLDDALRTFEFSGNK 95
T F+ GR + L + + SVA N L++ Y + G ++A+R F+ K
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK 206
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLP------------------------- 130
++ S+MV GY + G A LF M V+
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 131 -------SEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
+ TL + AC D EG Q+HG ++ L++ +SL+ MY+K G +
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 184 ADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKAC 243
+A+ F ++ D V W S+ITG VQ A L+ KM
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------------------- 367
Query: 244 SSLAALDQGKQMHA--GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS 301
GK M + +IK GF+ + + +KC L F MP +D I+
Sbjct: 368 -------PGKDMVSWTDMIK-GFSGKGEI--------SKCVEL------FGMMPEKDNIT 405
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
W AMIS NG+ +AL F KML + P++ TF ++LSA + +
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 95/236 (40%), Gaps = 30/236 (12%)
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
++ +S + +A+ G+L +A F + +V W ++I+ Y +NG A ++ +M +
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 227 ERIIP-NELTMASVLKACSSLAALD-----------QGKQMHAGIIKYG-------FNLE 267
N + A + C A + M G ++ G E
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 268 VPV-------GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALE 320
PV + L + Y + G ++ +F M ++V+S ++M+ G + G A
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 321 LFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACM 376
LFD+M T+ + +T+ ++ G + G+ F M E D+ A M
Sbjct: 230 LFDRM----TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 278 YAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
+A+ G+L + IF +M R ++SW AMIS ++NG +KA ++FD+M + T
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
++ +G + ++ F + ++ ++ YA M+ RAG+ +EA EF+
Sbjct: 120 TAMIKNKCDLG---KAYELFCDIPEKNAVS-----YATMITGFVRAGRFDEA-EFL 166
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 174/632 (27%), Positives = 292/632 (46%), Gaps = 112/632 (17%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSV 68
G ++A+ELF +M+ + + + +L + E GRQ+H ++ GL S VS+
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 69 ANALVTLYAKCGSLDDALRTFEFSGNKN-------------------------------- 96
N+L+ +Y++ G L+ + + F ++N
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 97 ---SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ 153
+TW+++++GYA G S+ A+ + M +G+ PS ++ ++ A ++ + G+
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ------------------- 194
+HGY L+ +YV ++L+DMY K G L AR F+ +
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 195 ----------------QPDVVLWTSIITGYVQNGDFEGALNLYG---------------- 222
+PD + W S+ +GY G E AL++ G
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 223 -------------------KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
KMQ E + PN TM+++LK L+ L GK++H ++
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFD 323
+ V +AL MY K G L IFW + + + SWN M+ G + G G + + F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 324 KMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRA 383
ML G +PD +TF ++LS C + GLV GW YF +M + I PT+EH +CMVD+L R+
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 384 GKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLS 443
G L+EA +FI++ + +W L C+ HR+ ++ A ++L L S+ Y+++
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMI 606
Query: 444 SIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELR 503
++Y+ L +WEDVE +R +M+ V + SWI++ VH+F HP +I EL
Sbjct: 607 NLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELY 666
Query: 504 LLTKLMKDEGYQPHLDSLPESETTGDDLGDQE 535
L MK GY +P++ D+ D E
Sbjct: 667 KLVSEMKKSGY------VPDTSCIHQDISDSE 692
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 187/385 (48%), Gaps = 38/385 (9%)
Query: 50 GRQVHSLAMKNGL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYA 108
G +H +K GL S V +A + Y +C SL A + F+ ++ + W+ +V
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
+SG+ EKA+ LF M SG + T+V ++ CS+ EGRQ+HGY L+LG +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQ---------------------------------- 194
+ +SL+ MY++ G L +R+ F ++
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 195 -QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+PD+V W S+++GY G + A+ + +MQI + P+ +++S+L+A + L GK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNG 313
+H I++ +V V + L MY K G L ++F M +++++WN+++SGLS
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 314 HGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHY 373
A L +M EG KPD +T+ +L S + +G ++ D M ++ + P V +
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSW 364
Query: 374 ACMVDILSRAGKLNEA-KEFIESAE 397
+ S+ G A K FI+ E
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQE 389
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 148/379 (39%), Gaps = 73/379 (19%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+LSGYAS GL+K+AI + ++M+ + + +S+L + L G+ +H ++N
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI-SSLLQAVAEPGHLKLGKAIHGYILRN 254
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKN------------------------ 96
L V V L+ +Y K G L A F+ KN
Sbjct: 255 QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALM 314
Query: 97 -----------SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSD- 144
+ITW+++ +GYA G EKAL + M GV P+ + + + CS
Sbjct: 315 IRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 145 ----------------------------------LCAIVEGRQMHGYSLKLGFGLQLYVL 170
L + G+++HG+ L+ YV
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
++LVDMY K G L A F ++ + W ++ GY G E + + M +
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 494
Query: 231 PNELTMASVLKACSSLAALDQG-KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
P+ +T SVL C + + +G K +YG + S + + + G LD+ +
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWD 554
Query: 290 IFWRMPTR-DVISWNAMIS 307
M + D W A +S
Sbjct: 555 FIQTMSLKPDATIWGAFLS 573
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 274/539 (50%), Gaps = 67/539 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+L GY G A+EA+ LF+++ + LT++L E L G+Q+H+ +
Sbjct: 161 LLHGYILNGYAEEALRLFKELNFSADA----ITLTTVLKACAELEALKCGKQIHAQILIG 216
Query: 61 GLLSIVSVANALVTLYAKCGSL--------------DDALRT-----------------F 89
G+ + ++LV +YAKCG L D +L F
Sbjct: 217 GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLF 276
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ N+ I W++M++GY + +AL LF+ M S TL VINAC L +
Sbjct: 277 DRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLE 335
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS--------------------------- 182
G+QMH ++ K G + V S+L+DMY+KCGS
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 183 ----LADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
+ DA+R FE ++ ++ W S+ G+ QNG L + +M + +E++++S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
V+ AC+S+++L+ G+Q+ A G + + V S+L +Y KCG ++ G +F M D
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ WN+MISG + NG G +A++LF KM + G +P +TF+ +L+AC++ GLV+ G F+
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M + P EH++CMVD+L+RAG + EA +E D +W +L GC +
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYK 635
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
+G A EK++EL S AYV LS+I+ G WE LVR++M+ V K PG SW +
Sbjct: 636 AMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 174/379 (45%), Gaps = 76/379 (20%)
Query: 51 RQVHSLAMKNGLLS-IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
RQ + L +K G LS IV VAN L+ +Y++ G + A F+ ++N +W+ M+ GY
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
SG+ +LR F M + GYS +
Sbjct: 106 SGEKGTSLRFFDMMP----------------------------ERDGYSWNV-------- 129
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
+V +AK G L+ ARR F + + DVV S++ GY+ NG E AL L+ ++
Sbjct: 130 ---VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS-- 184
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL----- 284
+ +T+ +VLKAC+ L AL GKQ+HA I+ G + + S+L +YAKCG L
Sbjct: 185 -ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 285 --------DD--------GYL----------IFWRMPTRDVISWNAMISGLSQNGHGNKA 318
DD GY +F R R VI WN+MISG N +A
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 319 LELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVD 378
L LF++M E T+ D+ T +++AC +G ++ G + +F + + + ++D
Sbjct: 304 LVLFNEMRNE-TREDSRTLAAVINACIGLGFLETG-KQMHCHACKFGLIDDIVVASTLLD 361
Query: 379 ILSRAGKLNEAKEFIESAE 397
+ S+ G EA + E
Sbjct: 362 MYSKCGSPMEACKLFSEVE 380
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 234/401 (58%), Gaps = 4/401 (0%)
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
+ M S V PS +T VI +C+DL A+ G+ +H +++ GFGL YV ++LV Y+K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG + AR+ F+ + + +V W S+++G+ QNG + A+ ++ +M+ P+ T S+
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L AC+ A+ G +H II G +L V +G+AL +Y++CG + +F +M +V
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLE-GTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+W AMIS +G+G +A+ELF+KM + G P+ VTFV +LSAC+H GLV+ G +K
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVD---HGLCLWRILLGGCRNH 415
M+ + + P VEH+ CMVD+L RAG L+EA +FI + LW +LG C+ H
Sbjct: 335 RMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
RNYD+G ++L+ L +V+LS+IY G+ ++V +R M + K+ G S
Sbjct: 395 RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSV 454
Query: 476 IELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
IE+++ ++F +GD H + EI L L K+ GY P
Sbjct: 455 IEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAP 495
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 165/310 (53%), Gaps = 7/310 (2%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
+ + TS++ L G+ VH A+ +G V ALVT Y+KCG ++ A + F
Sbjct: 106 SNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVF 165
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ K+ + W+++V+G+ Q+G +++A+++F+ M SG P T V +++AC+ A+
Sbjct: 166 DRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS 225
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
G +H Y + G L + + ++L+++Y++CG + AR F+ +++ +V WT++I+ Y
Sbjct: 226 LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 210 QNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSSLAALDQGKQMHAGIIK-YGFNLE 267
+G + A+ L+ KM+ + IPN +T +VL AC+ +++G+ ++ + K Y
Sbjct: 286 THGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS----WNAMISGLSQNGHGNKALELFD 323
V + M + G LD+ Y ++ + W AM+ + + + +E+
Sbjct: 346 VEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAK 405
Query: 324 KML-LEGTKP 332
+++ LE P
Sbjct: 406 RLIALEPDNP 415
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 279/514 (54%), Gaps = 4/514 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGYAS+G E ++L +MR + + + + LS L+ GR +H +K
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQ-TFGASLSVSGTMCDLEMGRMLHCQIVKT 274
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + + AL+T+Y KCG + + R E NK+ + W+ M++G + G +EKAL +F
Sbjct: 275 GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVF 334
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M SG S + V+ +C+ L + G +HGY L+ G+ L L+SL+ MYAKC
Sbjct: 335 SEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKC 394
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP-NELTMASV 239
G L + FE + + D+V W +II+GY QN D AL L+ +M+ + + + T+ S+
Sbjct: 395 GHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSL 454
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L+ACSS AL GK +H +I+ V +AL MY+KCG L+ F + +DV
Sbjct: 455 LQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW +I+G +G G+ ALE++ + L G +P+ V F+ +LS+CSH G+V +G F
Sbjct: 515 VSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSS 574
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M +F + P EH AC+VD+L RA ++ +A +F + + + I+L CR + +
Sbjct: 575 MVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+ E ++EL ++ YV L + A+ +W+DV M++ G+ K PG S IE+
Sbjct: 635 VEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMN 694
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEG 513
F + + H D+ S L+LL++ M G
Sbjct: 695 GKTTTFFMNHTSHS--DDTVSLLKLLSREMMQFG 726
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 188/348 (54%), Gaps = 4/348 (1%)
Query: 6 ASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSI 65
+S G K+ + F M + + F S+L + L G +H + NG S
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDT-FTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSD 80
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
++++LV LYAK G L A + FE ++ + W+AM+ Y+++G +A L + M
Sbjct: 81 FYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF 140
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
G+ P TL+ ++ S + I + + +H +++ GF + V++S++++Y KC + D
Sbjct: 141 QGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS 245
A+ F+ ++Q D+V W ++I+GY G+ L L +M+ + + P++ T + L +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
+ L+ G+ +H I+K GF++++ + +AL MY KCG + Y + +P +DV+ W M
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
ISGL + G KAL +F +ML G+ + +++++C+ +G D G
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 167/313 (53%), Gaps = 7/313 (2%)
Query: 100 WSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL 159
+++ + + GD ++ L F SM + +LP FT ++ AC+ L + G +H L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 160 KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALN 219
GF Y+ SSLV++YAK G LA AR+ FE +++ DVV WT++I Y + G A +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 220 LYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
L +M+ + I P +T+ +L S + + Q + +H + YGF+ ++ V +++ +Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
KC + D +F +M RD++SWN MISG + G+ ++ L+L +M +G +PD TF
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 340 LLSACSHMGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV 398
LS M ++ G + +++ FD+ ++ ++ + + GK + +E+
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIPN 308
Query: 399 DHGLCLWRILLGG 411
+C W +++ G
Sbjct: 309 KDVVC-WTVMISG 320
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 277/483 (57%), Gaps = 5/483 (1%)
Query: 31 EFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE 90
+F + +L+ ++ G+ +H+ + + L+ + + NAL+ +Y CG + +A F
Sbjct: 300 QFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFG 359
Query: 91 FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM-HCSGVLPSEFTLVGVINACSDLCAIV 149
N N ++W+++++G +++G E+A+ ++ + S P E+T I+A ++ V
Sbjct: 360 RIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFV 419
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
G+ +HG KLG+ ++V ++L+ MY K A++ F+ +++ DVVLWT +I G+
Sbjct: 420 HGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHS 479
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP 269
+ G+ E A+ + +M E+ + +++SV+ ACS +A L QG+ H I+ GF+ +
Sbjct: 480 RLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS 539
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
V AL MY K G + IF D+ WN+M+ SQ+G KAL F+++L G
Sbjct: 540 VCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG 599
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
PD VT+++LL+ACSH G +G + M ++ I +HY+CMV+++S+AG ++EA
Sbjct: 600 FMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEA 658
Query: 390 KEFIESAEVDHGLC-LWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
E IE + + LWR LL C N RN IG YA E++++L +++ ++LLS++Y
Sbjct: 659 LELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAV 718
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIEL-KSLVHVFVVGDSMHPQ-IDEIRSELRLLT 506
G+WEDV +RR ++ +K+PG SWIE+ + VF GD +P+ + + + EL L
Sbjct: 719 NGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLK 778
Query: 507 KLM 509
+ M
Sbjct: 779 RNM 781
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 166/302 (54%), Gaps = 5/302 (1%)
Query: 47 LDTGRQVHSLAMKNGLLSIVS---VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAM 103
L RQ+H+L + G + N L+++Y +CGSL+ A + F+ ++N ++++A+
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 104 VTGYAQSGD-SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG 162
+ Y+++ D + A L M V P+ T ++ C+ L ++ G ++ +KLG
Sbjct: 170 YSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLG 229
Query: 163 FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
+ + V +S++ MY+ CG L ARR F+ V D V W ++I G ++N E L +
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCG 282
M + + P + T + VL CS L + GK +HA II ++P+ +AL MY CG
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT-KPDTVTFVNLL 341
+ + + +F R+ +++SWN++ISG S+NG G +A+ ++ ++L T +PD TF +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 342 SA 343
SA
Sbjct: 410 SA 411
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 214/440 (48%), Gaps = 4/440 (0%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
N TS++ E + G ++S +K G V V +++ +Y+ CG L+ A R F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ N++++ W+ M+ G ++ E L F +M SGV P++FT V+N CS L +
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
G+ +H + L + ++L+DMY CG + +A F + P++V W SII+G
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 210 QNGDFEGALNLYGK-MQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
+NG E A+ +Y + +++ P+E T ++ + A + GK +H + K G+ V
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
VG+ L +MY K + +F M RDV+ W MI G S+ G+ A++ F +M E
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
+ D + +++ ACS M ++ +G + F ++ + +VD+ + GK E
Sbjct: 498 KNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY-E 555
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG-SPESSAYVLLSSIYT 447
E I S + L W +LG H + E+++E G P++ Y+ L + +
Sbjct: 556 TAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 448 ALGQWEDVELVRRMMKARGV 467
G + + MK +G+
Sbjct: 616 HRGSTLQGKFLWNQMKEQGI 635
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 18/389 (4%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAM--VTGYAQSGDS--EKALRL--FHSM 123
N L+++Y +C SL+ A + F+ +N +T + V Y G S + ++L F +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 124 HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL---YVLSSLVDMYAKC 180
+ ++V + C + + RQ+H L G G Y ++L+ MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEG-ALNLYGKMQIERIIPNELTMASV 239
GSL AR+ F+ + +VV + ++ + Y +N DF A L M E + PN T S+
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
++ C+ L + G +++ IIK G++ V V +++ MY+ CG L+ IF + RD
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
++WN MI G +N L F ML+ G P T+ +L+ CS +G G K+
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG----KL 321
Query: 360 MSDEFDITPTVEHYA---CMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
+ ++ ++ ++D+ G + EA ++ + L W ++ GC +
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENG 380
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSI 445
+ +L+ + +P Y ++I
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 144/299 (48%), Gaps = 8/299 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG + G ++A+ ++ ++ +E+ ++ +S E G+ +H K
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V V L+++Y K + A + F+ ++ + W+ M+ G+++ G+SE A++ F
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M+ F+L VI ACSD+ + +G H +++ GF + V +LVDMY K
Sbjct: 492 IEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKN 551
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G A F PD+ W S++ Y Q+G E AL+ + ++ +P+ +T S+L
Sbjct: 552 GKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLL 611
Query: 241 KACSSLAALDQGK----QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
ACS + QGK QM IK GF S + + +K G +D+ + + P
Sbjct: 612 AACSHRGSTLQGKFLWNQMKEQGIKAGFKHY----SCMVNLVSKAGLVDEALELIEQSP 666
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 154/337 (45%), Gaps = 20/337 (5%)
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVV--LWTSIITGYVQNG-DFEGALNLYGKM 224
Y ++L+ MY +C SL AR+ F+ + Q ++V S + YV G + G
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 225 QIERIIP-NEL--TMASVLKACSSLAALDQGKQMHAGIIKYGFN--LEVP-VGSALSAMY 278
Q+ +P NE+ ++ + + C S+ L + +Q+HA ++ G E P + L +MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 279 AKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN-GHGNKALELFDKMLLEGTKPDTVTF 337
+CGSL+ +F +MP R+V+S+NA+ S S+N + A L M E KP++ TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
+L+ C+ + V G + + + V ++ + S G L A+ +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQII-KLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 398 VDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVEL 457
+ +++G +N + D + LM P Y ++ + + LG + +L
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 458 VR-RMMKARGVAKEP--------GCSWIELKSLVHVF 485
+ R++ + +A P CS +++ +VF
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVF 358
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 257/473 (54%), Gaps = 12/473 (2%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSL--DDALR 87
+ F +L + +L + +H+ K GL S + V NAL+ Y++CG L DA++
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 88 TFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCA 147
FE +++++W++M+ G ++G+ A RLF M ++ S T++ C ++
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI-SWNTMLDGYARCREMSK 234
Query: 148 IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP--DVVLWTSII 205
E + + + S++V Y+K G + AR F+ + P +VV WT II
Sbjct: 235 AFELFEKMPERNTVSW-------STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 206 TGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN 265
GY + G + A L +M + + + S+L AC+ L G ++H+ + +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
V +AL MYAKCG+L + +F +P +D++SWN M+ GL +GHG +A+ELF +M
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
EG +PD VTF+ +L +C+H GL+D G DYF M +D+ P VEHY C+VD+L R G+
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 386 LNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSI 445
L EA + +++ ++ + +W LLG CR H DI + L++L + Y LLS+I
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI 527
Query: 446 YTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEI 498
Y A WE V +R MK+ GV K G S +EL+ +H F V D HP+ D+I
Sbjct: 528 YAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQI 580
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 18/384 (4%)
Query: 38 LSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNS 97
L DL + L+ +Q+H+ ++ L + +A L++ + C + A+R F N
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
++++ +AQ+ +A +F M G+ FT ++ ACS + + MH +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLA--DARRGFEYVQQPDVVLWTSIITGYVQNGDFE 215
KLG +YV ++L+D Y++CG L DA + FE + + D V W S++ G V+ G+
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 216 GALNLYGKMQIERIIPNELTMASVLKACSSLA-ALDQGKQM-HAGIIKYGFNLEVPVGSA 273
A L+ +M +R + + TM C ++ A + ++M + + S
Sbjct: 203 DARRLFDEMP-QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW---------ST 252
Query: 274 LSAMYAKCGSLDDGYLIFWRM--PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTK 331
+ Y+K G ++ ++F +M P ++V++W +I+G ++ G +A L D+M+ G K
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 332 PDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE 391
D +++L+AC+ GL+ G ++ ++ ++D+ ++ G L +A +
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKAFD 371
Query: 392 FIESAEVDHGLCLWRILLGGCRNH 415
L W +L G H
Sbjct: 372 VFNDIP-KKDLVSWNTMLHGLGVH 394
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GYA GL KEA L +QM + + V+ SIL+ + L G ++HS+ ++
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI-SILAACTESGLLSLGMRIHSILKRS 344
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L S V NAL+ +YAKCG+L A F K+ ++W+ M+ G G ++A+ LF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL--QLYVLSSLVDMYA 178
M G+ P + T + V+ +C+ I EG + YS++ + L Q+ LVD+
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 179 KCGSLADARRGFEYVQ-QPDVVLWTSII 205
+ G L +A + + + +P+VV+W +++
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALL 491
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 305/602 (50%), Gaps = 72/602 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGY G EA LF +M+ + + NE+ L S+L L G Q+H +K
Sbjct: 96 LISGYCKSGSKVEAFNLFWEMQSDGIK-PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT 154
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G V+V N L+ +YA+C + +A FE G KN++TW++M+TGY+Q+G + KA+
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F + G +++T V+ AC+ + A G Q+H +K GF +YV S+L+DMYAK
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C + AR E ++ DVV W S+I G V+ G AL+++G+M + ++ T+ S+
Sbjct: 275 CREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSI 334
Query: 240 LKACSSLAALDQ--GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
L C +L+ + H I+K G+ V +AL MYAK G +D +F M +
Sbjct: 335 LN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK 393
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW--- 354
DVISW A+++G + NG ++AL+LF M + G PD + ++LSA + + L++ G
Sbjct: 394 DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVH 453
Query: 355 -DYFK---------------------MMSDEFDITPTVE-----HYACMVDILSRAGKLN 387
+Y K + D I ++E + C++ ++ G L
Sbjct: 454 GNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLE 513
Query: 388 EAKEFIESAEVDHGL------------------------------------CLWRILLGG 411
+A+ + +S +G+ +W+ +L
Sbjct: 514 DAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAA 573
Query: 412 CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEP 471
R H N + G A + LMEL + YV LS++Y+A G+ ++ VRR+MK+R ++KEP
Sbjct: 574 SRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEP 633
Query: 472 GCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLD-SLPESETTGDD 530
GCSW+E K VH F+ D HP++ EI S++ + L+K+ GY + +L + + G +
Sbjct: 634 GCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKE 693
Query: 531 LG 532
LG
Sbjct: 694 LG 695
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 233/478 (48%), Gaps = 66/478 (13%)
Query: 37 ILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKN 96
+L DL+++ +D RQ+ + + N ++ Y+ L DA + F + KN
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPERDEFTW----NTMIVAYSNSRRLSDAEKLFRSNPVKN 89
Query: 97 SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG 156
+I+W+A+++GY +SG +A LF M G+ P+E+TL V+ C+ L ++ G Q+HG
Sbjct: 90 TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 157 YSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFE 215
+++K GF L + V++ L+ MYA+C +++A FE ++ + + V WTS++TGY QNG
Sbjct: 150 HTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAF 209
Query: 216 GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALS 275
A+ + ++ E N+ T SVL AC+S++A G Q+H I+K GF + V SAL
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 276 AMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTV 335
MYAKC ++ + M DV+SWN+MI G + G +AL +F +M K D
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 336 TFVNLL------------SACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRA 383
T ++L ++ +H +V G+ +K++++ +VD+ ++
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN------------ALVDMYAKR 377
Query: 384 GKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD------------------------ 419
G ++ A + E ++ + W L+ G ++ +YD
Sbjct: 378 GIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASV 436
Query: 420 IGAYAGEKLMELGSPESSAYVL------------LSSIYTALGQWEDVELVRRMMKAR 465
+ A A L+E G Y+ L ++YT G ED ++ M+ R
Sbjct: 437 LSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 268/468 (57%), Gaps = 8/468 (1%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+ V S++ ++G + + LV Y + G A + F+ ++ ++W+++++GY+
Sbjct: 56 KVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 111 GDSEKALRLFHSMHCS--GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
G K + M S G P+E T + +I+AC + EGR +HG +K G ++
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
V+++ ++ Y K G L + + FE + ++V W ++I ++QNG E L + +
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
P++ T +VL++C + + + +H I+ GF+ + +AL +Y+K G L+D
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSS 290
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
+F + + D ++W AM++ + +G G A++ F+ M+ G PD VTF +LL+ACSH G
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRIL 408
LV+ G YF+ MS + I P ++HY+CMVD+L R+G L +A I+ ++ +W L
Sbjct: 351 LVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Query: 409 LGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVA 468
LG CR +++ +G A E+L EL + YV+LS+IY+A G W+D +R +MK +G+
Sbjct: 411 LGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470
Query: 469 KEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE-GYQ 515
+ GCS+IE + +H FVVGD HP+ ++I+ +L+ + K MK E GY+
Sbjct: 471 RASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYK 518
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 267/497 (53%), Gaps = 32/497 (6%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
RQVH ++ G S V V N ++T Y KC +++ A + F+ ++ ++W++M++GY+Q
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 110 SGDSEKALRLFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
SG E +++ +M CS P+ T++ V AC ++ G ++H ++ + L
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI-- 226
+ ++++ YAKCGSL AR F+ + + D V + +II+GY+ +G + A+ L+ +M+
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 227 -----------------ERII------------PNELTMASVLKACSSLAALDQGKQMHA 257
E +I PN +T++S+L + + + L GK++HA
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNK 317
I+ G + + V +++ YAK G L +F R +I+W A+I+ + +G +
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
A LFD+M GTKPD VT +LSA +H G D F M ++DI P VEHYACMV
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMV 510
Query: 378 DILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESS 437
+LSRAGKL++A EFI +D +W LL G + +I +A ++L E+ +
Sbjct: 511 SVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTG 570
Query: 438 AYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDE 497
Y +++++YT G+WE+ E+VR MK G+ K PG SWIE + + F+ DS + E
Sbjct: 571 NYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKE 630
Query: 498 IRSELRLLTKLMKDEGY 514
+ + L + M D+ Y
Sbjct: 631 MYEIIEGLVESMSDKEY 647
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 199/444 (44%), Gaps = 57/444 (12%)
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHS----- 122
+A+ L++ Y + AL F+ +N+ +++A++ Y A LF S
Sbjct: 59 LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSS 118
Query: 123 -MHCSGVLPSEFTLVGVINA---CSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
P ++ V+ A C D RQ+HG+ ++ GF ++V + ++ Y
Sbjct: 119 CYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYT 178
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-QIERIIPNELTMA 237
KC ++ AR+ F+ + + DVV W S+I+GY Q+G FE +Y M PN +T+
Sbjct: 179 KCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVI 238
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
SV +AC + L G ++H +I+ +++ + +A+ YAKCGSLD +F M +
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 298 DVI-------------------------------SWNAMISGLSQNGHGNKALELFDKML 326
D + +WNAMISGL QN H + + F +M+
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 327 LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM------SDEFDITPTVEHYACMVDIL 380
G++P+TVT +LL + ++ + G + ++ + T +++YA
Sbjct: 359 RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA------ 412
Query: 381 SRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYV 440
+ G L A+ ++ + D L W ++ H + D +++ LG+ V
Sbjct: 413 -KLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDD--V 468
Query: 441 LLSSIYTALGQWEDVELVRRMMKA 464
L+++ +A D ++ + + +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDS 492
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 165/343 (48%), Gaps = 33/343 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY+ G ++ ++++ M + N + S+ ++ L G +VH ++N
Sbjct: 204 MISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN 263
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSI---------------------- 98
+ +S+ NA++ YAKCGSLD A F+ K+S+
Sbjct: 264 HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 99 ---------TWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
TW+AM++G Q+ E+ + F M G P+ TL ++ + + +
Sbjct: 324 SEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLK 383
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
G+++H ++++ G +YV +S++D YAK G L A+R F+ + ++ WT+IIT Y
Sbjct: 384 GGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYA 443
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII-KYGFNLEV 268
+GD + A +L+ +MQ P+++T+ +VL A + D + + ++ KY V
Sbjct: 444 VHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGV 503
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS-WNAMISGLS 310
+ + ++ ++ G L D +MP + W A+++G S
Sbjct: 504 EHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGAS 546
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 46/256 (17%)
Query: 1 MLSGYASLGLAKEAIELFEQMRC-----------------EEEEGENEF----------- 32
++SGY + GL KEA+ LF +M EE N F
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPN 365
Query: 33 --VLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE 90
L+S+L L + L G+++H+ A++NG + + V +++ YAK G L A R F+
Sbjct: 366 TVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD 425
Query: 91 FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINAC-----SDL 145
+++ I W+A++T YA GDS+ A LF M C G P + TL V++A SD+
Sbjct: 426 NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDM 485
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLW 201
+ + Y ++ G++ Y + +V + ++ G L+DA E++ + P +W
Sbjct: 486 AQHIFDSMLTKYDIEP--GVEHY--ACMVSVLSRAGKLSDA---MEFISKMPIDPIAKVW 538
Query: 202 TSIITGYVQNGDFEGA 217
+++ G GD E A
Sbjct: 539 GALLNGASVLGDLEIA 554
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 12/258 (4%)
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG 212
Q+H + ++ S L+ Y + A F+ + + + +++ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 213 DFEGALNLY------GKMQIERIIPNELTMASVLKA---CSSLAALDQGKQMHAGIIKYG 263
+ A +L+ + P+ ++++ VLKA C +Q+H +I+ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFD 323
F+ +V VG+ + Y KC +++ +F M RDV+SWN+MISG SQ+G +++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 324 KML-LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
ML KP+ VT +++ AC + G + K M E I + ++ ++
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMI-ENHIQMDLSLCNAVIGFYAK 281
Query: 383 AGKLNEAKE-FIESAEVD 399
G L+ A+ F E +E D
Sbjct: 282 CGSLDYARALFDEMSEKD 299
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 281/512 (54%), Gaps = 10/512 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG+ AKEA+ F +MR + N F ++ILS + LD G+Q+HS +K
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQ-PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 61 GLLSIVSVANALVTLYAKCGSLD-DALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G V NALV +Y KC + + +A R F + N ++W+ ++ G G + L
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGL 414
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M V P+ TL GV+ ACS L + ++H Y L+ ++ V +SLVD YA
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYAS 474
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
+ A +++ D + +TS++T + + G E AL++ M + I ++L++
Sbjct: 475 SRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGF 534
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ A ++L AL+ GK +H +K GF+ V ++L MY+KCGSL+D +F + T DV
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SWN ++SGL+ NG + AL F++M ++ T+PD+VTF+ LLSACS+ L D G +YF++
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQV 654
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M ++I P VEHY +V IL RAG+L EA +E+ + +++ LL CR N
Sbjct: 655 MKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLS 714
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
+G K + L + + Y+LL+ +Y G+ E + R +M + ++K+ G S +E++
Sbjct: 715 LGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Query: 480 SLVHVFVVGD--------SMHPQIDEIRSELR 503
VH FV D ++ +I+ I+ E++
Sbjct: 775 GKVHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 183/353 (51%), Gaps = 3/353 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S + A+ LFE+M NEF +S++ + G +VH +K
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTH-PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V ++L LY+KCG +A F N ++I+W+ M++ + +AL+ +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M +GV P+EFT V ++ A S L + G+ +H + G L + + +SLVD Y++
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+ DA R + DV LWTS+++G+V+N + A+ + +M+ + PN T +++L
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD-DGYLIFWRMPTRDV 299
CS++ +LD GKQ+H+ IK GF VG+AL MY KC + + + +F M + +V
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
+SW +I GL +G L +M+ +P+ VT +L ACS + V R
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRR 445
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 231/438 (52%), Gaps = 12/438 (2%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFL--DTGRQVHSLAMKNGLLSIVSVA 69
+EA++ + +M + NEF +L + FL + G+ +HS + G+ V +
Sbjct: 207 REALQFYSEM-VKAGVPPNEFTFVKLL---GASSFLGLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
+LV Y++ ++DA+R SG ++ W+++V+G+ ++ +++A+ F M G+
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC-GSLADARR 188
P+ FT +++ CS + ++ G+Q+H ++K+GF V ++LVDMY KC S +A R
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA 248
F + P+VV WT++I G V +G + L +M + PN +T++ VL+ACS L
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISG 308
+ + ++HA +++ + E+ VG++L YA +D + + M RD I++ ++++
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 309 LSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITP 368
++ G AL + + M +G + D ++ +SA +++G ++ G + S + +
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSG 561
Query: 369 TVEHYACMVDILSRAGKLNEAKE-FIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
+VD+ S+ G L +AK+ F E A D + W L+ G ++ A E+
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEEIATPD--VVSWNGLVSGLASNGFISSALSAFEE 619
Query: 428 L-MELGSPESSAYVLLSS 444
+ M+ P+S +++L S
Sbjct: 620 MRMKETEPDSVTFLILLS 637
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 1/304 (0%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G +H +K GLL + + N L++LY K + +A + F+ ++ W+ M++ + +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
S + AL LF M SG P+EFT V+ +C+ L I G ++HG +K GF V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
SSL D+Y+KCG +A F +Q D + WT +I+ V + AL Y +M +
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
PNE T +L A SS L+ GK +H+ II G L V + ++L Y++ ++D
Sbjct: 222 PPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+ +DV W +++SG +N +A+ F +M G +P+ T+ +LS CS +
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 350 VDRG 353
+D G
Sbjct: 341 LDFG 344
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 153/304 (50%), Gaps = 12/304 (3%)
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G +H +K G L + ++L+ +Y K + +AR+ F+ + V WT +I+ + +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
+ +F AL+L+ +M PNE T +SV+++C+ L + G ++H +IK GF V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
GS+LS +Y+KCG + +F + D ISW MIS L +AL+ + +M+ G
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEF---DITPTVEHYACMVDILSRAGKLN 387
P+ TFV LL A S +GL ++ K + I V +VD S+ K+
Sbjct: 222 PPNEFTFVKLLGASSFLGL-----EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 388 EAKEFIESAEVDHGLCLWRILLGG-CRNHRNYD-IGAYAGEKLMELGSPESSAYVLLSSI 445
+A + S+ + + LW ++ G RN R + +G + + + L P + Y + S+
Sbjct: 277 DAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL-QPNNFTYSAILSL 334
Query: 446 YTAL 449
+A+
Sbjct: 335 CSAV 338
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 263/502 (52%), Gaps = 39/502 (7%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDD-------ALRTFEFSGNKNSITWSAMVT 105
+H ++ L+S V VA+ L+ L + + A F N N ++ ++
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 106 GYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL 165
++ + KA + M S + P T +I A S++ ++ G Q H ++ GF
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTS---------------------- 203
+YV +SLV MYA CG +A A R F + DVV WTS
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 204 ---------IITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQ 254
+I GY +N FE A++L+ M+ E ++ NE M SV+ +C+ L AL+ G++
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 255 MHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGH 314
+ ++K + + +G+AL M+ +CG ++ +F +P D +SW+++I GL+ +GH
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 315 GNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYA 374
+KA+ F +M+ G P VTF +LSACSH GLV++G + ++ M + I P +EHY
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 375 CMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSP 434
C+VD+L RAGKL EA+ FI V + LLG C+ ++N ++ G L+++
Sbjct: 391 CIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPE 450
Query: 435 ESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSM-HP 493
S YVLLS+IY GQW+ +E +R MMK + V K PG S IE+ ++ F +GD HP
Sbjct: 451 HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHP 510
Query: 494 QIDEIRSELRLLTKLMKDEGYQ 515
++ +IR + + ++ GY+
Sbjct: 511 EMGKIRRKWEEILGKIRLIGYK 532
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 159/349 (45%), Gaps = 42/349 (12%)
Query: 49 TGRQVHSLAMKNGLLSIVSVANALVTLYA------------------------------- 77
G Q HS ++ G + V V N+LV +YA
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 78 KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVG 137
KCG +++A F+ ++N TWS M+ GYA++ EKA+ LF M GV+ +E +V
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
VI++C+ L A+ G + + Y +K + L + ++LVDM+ +CG + A FE + + D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
+ W+SII G +G A++ + +M IP ++T +VL ACS +++G +++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 258 GIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGN 316
+ K +G + + M + G L + +M + + G +
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 317 KALELFDKMLLEGTKPDTVTFVNLLS---ACSHMGLVDRGWDYFKMMSD 362
+ E ML++ KP+ + LLS AC+ WD + + D
Sbjct: 435 EVAERVGNMLIK-VKPEHSGYYVLLSNIYACAGQ------WDKIESLRD 476
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 167/376 (44%), Gaps = 47/376 (12%)
Query: 136 VGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM------YAKCGSLADARRG 189
+ ++ +CS + + +HG+ L+ ++V S L+ + + K +L G
Sbjct: 16 LALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 190 -FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA 248
F +Q P++ ++ +I + + A Y +M RI P+ +T ++KA S +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISG 308
+ G+Q H+ I+++GF +V V ++L MYA CG + IF +M RDV+SW +M++G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 309 LSQNG-------------HGN------------------KALELFDKMLLEGTKPDTVTF 337
+ G H N KA++LF+ M EG +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
V+++S+C+H+G ++ G ++ + +T + +VD+ R G + +A E
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKS-HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 398 VDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS-PESSAYVLLSSIYTALGQWED-V 455
L W ++ G H + + +++ LG P + + S + G E +
Sbjct: 312 ETDSLS-WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 456 ELVRRMMKARGVAKEP 471
E+ M K G+ EP
Sbjct: 371 EIYENMKKDHGI--EP 384
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GYA ++AI+LFE M+ E NE V+ S++S L+ G + + +K+
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMK-REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ + + ALV ++ +CG ++ A+ FE +S++WS+++ G A G + KA+ F
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYF 338
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ--LYVLSSLVDMYA 178
M G +P + T V++ACS + +G +++ ++K G++ L +VDM
Sbjct: 339 SQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE-NMKKDHGIEPRLEHYGCIVDMLG 397
Query: 179 KCGSLADA 186
+ G LA+A
Sbjct: 398 RAGKLAEA 405
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 249/468 (53%), Gaps = 2/468 (0%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+++H++ ++ G S+ L+ G + A + F+ W+ + GY ++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
++L L+ M GV P EFT V+ A S L G +H + +K GFG V
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
+ LV MY K G L+ A FE +Q D+V W + + VQ G+ AL + KM + +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
+ T+ S+L AC L +L+ G++++ K + + V +A M+ KCG+ + ++
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F M R+V+SW+ MI G + NG +AL LF M EG +P+ VTF+ +LSACSH GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 351 DRGWDYFKMM--SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRIL 408
+ G YF +M S++ ++ P EHYACMVD+L R+G L EA EFI+ V+ +W L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 409 LGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVA 468
LG C HR+ +G + L+E S +VLLS+IY A G+W+ V+ VR M+ G
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 469 KEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
K S +E + +H F GD HPQ I +L + K ++ GY P
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVP 495
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 171/347 (49%), Gaps = 9/347 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+ GY L E++ L+++MR + +EF ++ +++ G +H+ +K
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + VA LV +Y K G L A FE K+ + W+A + Q+G+S AL F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M V FT+V +++AC L ++ G +++ + K + V ++ +DM+ KC
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G+ AR FE ++Q +VV W+++I GY NGD AL L+ MQ E + PN +T VL
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 241 KACSSLAALDQGKQMHAGIIKYG-FNLEVPVGSALSAMY---AKCGSLDDGYLIFWRMPT 296
ACS +++GK+ + +++ NLE P + M + G L++ Y +MP
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQSNDKNLE-PRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 297 R-DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
D W A++ + H + L +L T PD ++ LLS
Sbjct: 378 EPDTGIWGALLGACAV--HRDMILGQKVADVLVETAPDIGSYHVLLS 422
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 238/433 (54%), Gaps = 4/433 (0%)
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
F+ + + + G +G ++A+ L S SG+ T ++ C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWS---SGLQVEPETYAVLLQECKQRKEY 124
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
+G+++H +GF L Y+ L+ +YA G L A F ++ D++ W ++I+GY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
VQ G + L +Y M+ RI+P++ T ASV +ACS+L L+ GK+ HA +IK +
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
V SAL MY KC S DG+ +F ++ TR+VI+W ++ISG +G ++ L+ F+KM E
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G +P+ VTF+ +L+AC+H GLVD+GW++F M ++ I P +HYA MVD L RAG+L E
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A EF+ + +W LLG CR H N + A K +EL YV+ ++ Y +
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKL 508
G E VRR M+ GV K+PG S IEL+ VH F+ D+ H ++I ++ +T
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSF 484
Query: 509 MKDEGYQPH-LDS 520
D Y P LDS
Sbjct: 485 FMDIDYYPDGLDS 497
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 20/353 (5%)
Query: 2 LSGYASLGLAKEAIELF--EQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
L G G KEA+ L ++ E E +L + + + G+++H+
Sbjct: 83 LKGLCVTGRLKEAVGLLWSSGLQVEPE------TYAVLLQECKQRKEYTKGKRIHAQMFV 136
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G + L+ LYA G L A F ++ I W+AM++GY Q G ++ L +
Sbjct: 137 VGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFI 196
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
++ M + ++P ++T V ACS L + G++ H +K + V S+LVDMY K
Sbjct: 197 YYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFK 256
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C S +D R F+ + +V+ WTS+I+GY +G L + KM+ E PN +T V
Sbjct: 257 CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVV 316
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMY---AKCGSLDDGYLIFWRMPT 296
L AC+ +D+G + H +K + +E P G +AM + G L + Y + P
Sbjct: 317 LTACNHGGLVDKGWE-HFYSMKRDYGIE-PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPC 374
Query: 297 RDVIS-WNAMISGLSQNGHGN-KALELFDKMLLE---GTKPDTVTFVNLLSAC 344
++ W +++ HGN K LEL LE + V F N ++C
Sbjct: 375 KEHPPVWGSLLGAC--RIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASC 425
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 29/236 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY GL +E + ++ MR + +++ S+ + + L+ G++ H++ +K
Sbjct: 180 MISGYVQKGLEQEGLFIYYDMR-QNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR 238
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ S + V +ALV +Y KC S D R F+ +N ITW+++++GY G + L+ F
Sbjct: 239 CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCF 298
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL----QLYVLSSLVDM 176
M G P+ T + V+ AC+ + +G + H YS+K +G+ Q Y +++VD
Sbjct: 299 EKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHY--AAMVDT 355
Query: 177 YAKCGSLADARRGFEYV------QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
+ G L +A +E+V + P V W S++ GA ++G +++
Sbjct: 356 LGRAGRLQEA---YEFVMKSPCKEHPPV--WGSLL----------GACRIHGNVKL 396
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 257/486 (52%), Gaps = 29/486 (5%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
++F L+ +L +R F+ G Q+H K GL S + + N L+ LY KCG L + + F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFH--SMHCSGVLPSEFTLVGV------INA 141
+ ++S+++++M+ GY + G A LF M ++ + G ++
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 142 CSDLCA------------IVEGRQMHGYSLKLGFGL-------QLYVLSSLVDMYAKCGS 182
S L A +++G HG ++ GL + ++++D YAK G
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHG-RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGF 298
Query: 183 LADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASVLK 241
+ A+ F+ + DVV + S++ GYVQN AL ++ M+ E ++P++ T+ VL
Sbjct: 299 VHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLP 358
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS 301
A + L L + MH I++ F L +G AL MY+KCGS+ L+F + + +
Sbjct: 359 AIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 418
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMS 361
WNAMI GL+ +G G A ++ ++ KPD +TFV +L+ACSH GLV G F++M
Sbjct: 419 WNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMR 478
Query: 362 DEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIG 421
+ I P ++HY CMVDILSR+G + AK IE V+ +WR L C +H+ ++ G
Sbjct: 479 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG 538
Query: 422 AYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSL 481
+ L+ S+YVLLS++Y + G W+DV VR MMK R + K PGCSWIEL
Sbjct: 539 ELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGR 598
Query: 482 VHVFVV 487
VH F V
Sbjct: 599 VHEFFV 604
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 229/495 (46%), Gaps = 63/495 (12%)
Query: 31 EFVLTSILSDLNRTEFLDTGRQVHSLAMKNGL-----------LSIVSVANALVTLYAKC 79
E ++S + L + D Q+H +K G+ L+ S + +A+C
Sbjct: 9 ECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARC 68
Query: 80 GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI 139
+ + +F F ++ W+A++ ++ D +AL L M +GV +F+L V+
Sbjct: 69 VFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVL 128
Query: 140 NACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVV 199
ACS L + G Q+HG+ K G L++ + L+ +Y KCG L +R+ F+ + + D V
Sbjct: 129 KACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV 188
Query: 200 LWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA-ALDQGKQMHA- 257
+ S+I GYV+ G A L+ M +E + N ++ S++ + + +D ++ A
Sbjct: 189 SYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 258 --------------GIIKYG--------FNL----EVPVGSALSAMYAKCGSLDDGYLIF 291
G +K+G F++ +V + + YAK G + +F
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 292 WRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLV 350
+MP RDV+++N+M++G QN + +ALE+F M E PD T V +L A + +G +
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 351 DRGWD-YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK---EFIESAEVDHGLCLWR 406
+ D + ++ +F + + ++D+ S+ G + A E IE+ +DH W
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIENKSIDH----WN 420
Query: 407 ILLGGCRNHRNYDIGAYAGEKLMELG----SPESSAYVLLSSIYTALGQWED----VELV 458
++GG H +G A + L+++ P+ +V + + + G ++ EL+
Sbjct: 421 AMIGGLAIH---GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELM 477
Query: 459 RRMMKARGVAKEPGC 473
RR K + GC
Sbjct: 478 RRKHKIEPRLQHYGC 492
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 168/386 (43%), Gaps = 87/386 (22%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRT-EFLDTGRQVHSLAMK 59
M+ GY GL A ELF+ M E +N S++S +T + +D ++ + +
Sbjct: 193 MIDGYVKCGLIVSARELFDLM---PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE 249
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
L+S N+++ Y K G ++DA F+ ++ +TW+ M+ GYA+ G A L
Sbjct: 250 KDLIS----WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTL 305
Query: 120 FHSM--------------------HC------------SGVLPSEFTLVGVINACSDLCA 147
F M H S +LP + TLV V+ A + L
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 148 IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITG 207
+ + MH Y ++ F L + +L+DMY+KCGS+ A FE ++ + W ++I G
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 208 YVQNGDFEGALNLYGKMQIER--IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN 265
+G E A ++ +QIER + P+++T VL ACS H+G++K
Sbjct: 426 LAIHGLGESAFDML--LQIERLSLKPDDITFVGVLNACS-----------HSGLVK---- 468
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS-----WNAMISGLSQNGHGNKALE 320
+G L F M + I + M+ LS++G A
Sbjct: 469 --------------------EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKN 508
Query: 321 LFDKMLLEGTKPDTVTFVNLLSACSH 346
L ++M +E P+ V + L+ACSH
Sbjct: 509 LIEEMPVE---PNDVIWRTFLTACSH 531
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GY EA+E+F M E ++ L +L + + L +H ++
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ AL+ +Y+KCGS+ A+ FE NK+ W+AM+ G A G E A +
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEG-------RQMHGYSLKLGFGLQLYVLSSL 173
+ + P + T VGV+NACS + EG R+ H K+ LQ Y +
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH----KIEPRLQHY--GCM 493
Query: 174 VDMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFE 215
VD+ ++ GS+ A+ E + +P+ V+W + +T + +FE
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFE 536
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 278/501 (55%), Gaps = 9/501 (1%)
Query: 15 IELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGL-LSIVSVANALV 73
++LF++M E + + +TS+L E +D GR VH +++ G L+ V V N+L+
Sbjct: 210 LKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLI 269
Query: 74 TLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEF 133
+Y+K +D A R F+ + +N ++W++++ G+ + ++AL +FH M V E
Sbjct: 270 DMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEV 329
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
T+V ++ C + + +HG ++ G+ LSSL+D Y C + DA + +
Sbjct: 330 TVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM 389
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
DVV +++I+G G + A++++ M R PN +T+ S+L ACS A L K
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSK 446
Query: 254 QMHAGIIKYGFNL-EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
H I+ + ++ VG+++ YAKCG+++ F ++ +++ISW +IS + N
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
G +KAL LFD+M +G P+ VT++ LSAC+H GLV +G FK M +E D P+++H
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQH 565
Query: 373 YACMVDILSRAGKLNEAKEFIES--AEVDHGLCLWRILLGGCRNH-RNYDIGAYAGEKLM 429
Y+C+VD+LSRAG+++ A E I++ +V G W +L GCRN + I + +++
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL 625
Query: 430 ELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGD 489
EL SS Y+L SS + A WEDV ++RR++K R V G S + +L F+ GD
Sbjct: 626 ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Query: 490 SMHPQIDEIRSELRLLTKLMK 510
+ E+ ++ L + MK
Sbjct: 686 KLSQSDSELNDVVQSLHRCMK 706
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 176/317 (55%), Gaps = 21/317 (6%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N++ Y KCG L LR F+ +++S++W+ +V G G E+ L F + G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P+ TLV VI+AC L +G ++HGY ++ GF V +S++ MYA SL+ AR+
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSSLAA 248
F+ + + DV+ W+ +I YVQ+ + L L+ +M E + P+ +T+ SVLKAC+ +
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 249 LDQGKQMHAGIIKYGFNL-EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
+D G+ +H I+ GF+L +V V ++L MY+K +D + +F R+++SWN++++
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 301
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS-----------HMGLVDRGWDY 356
G N ++ALE+F M+ E + D VT V+LL C H ++ RG++
Sbjct: 302 GFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE- 360
Query: 357 FKMMSDEFDITPTVEHY 373
S+E ++ ++ Y
Sbjct: 361 ----SNEVALSSLIDAY 373
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 180/344 (52%), Gaps = 9/344 (2%)
Query: 4 GYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLL 63
G G +E + F ++R E ++ I + R+ + D G ++H +++G
Sbjct: 101 GLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHA--CRSLWFD-GEKIHGYVIRSGFC 157
Query: 64 SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM 123
I SV N+++ +YA SL A + F+ ++ I+WS ++ Y QS + L+LF M
Sbjct: 158 GISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM 216
Query: 124 -HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL-QLYVLSSLVDMYAKCG 181
H + P T+ V+ AC+ + I GR +HG+S++ GF L ++V +SL+DMY+K
Sbjct: 217 VHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGF 276
Query: 182 SLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
+ A R F+ ++V W SI+ G+V N ++ AL ++ M E + +E+T+ S+L+
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR 336
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS 301
C K +H II+ G+ S+L Y C +DD + M +DV+S
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
+ MISGL+ G ++A+ +F M P+ +T ++LL+ACS
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACS 437
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG A G + EAI +F MR + N + S+L+ + + L T + H +A++
Sbjct: 400 MISGLAHAGRSDEAISIFCHMR----DTPNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 61 GL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
L ++ +SV ++V YAKCG+++ A RTF+ KN I+W+ +++ YA +G +KAL L
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALAL 515
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M G P+ T + ++AC+ + +G + ++ L S +VDM ++
Sbjct: 516 FDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSR 575
Query: 180 CGSLADA 186
G + A
Sbjct: 576 AGEIDTA 582
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/484 (32%), Positives = 253/484 (52%), Gaps = 50/484 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
+L G A ++ + L+ +M E+ G + + T +L ++ E+ G H +
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEM---EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVV 139
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
++G + V NAL+ +A CG L A F+ S + + WS+M +GYA+ G ++A+R
Sbjct: 140 RHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMR 199
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M + + G +
Sbjct: 200 LFDEMPYKDQVAWNVMITGCL--------------------------------------- 220
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KC + AR F+ + DVV W ++I+GYV G + AL ++ +M+ P+ +T+ S
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 239 VLKACSSLAALDQGKQMHAGIIKYG-----FNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
+L AC+ L L+ GK++H I++ + P+ +AL MYAKCGS+D +F
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+ RD+ +WN +I GL+ + H ++E+F++M P+ VTF+ ++ ACSH G VD G
Sbjct: 341 VKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 354 WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCR 413
YF +M D ++I P ++HY CMVD+L RAG+L EA F+ES +++ +WR LLG C+
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACK 459
Query: 414 NHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGC 473
+ N ++G YA EKL+ + ES YVLLS+IY + GQW+ V+ VR+M V K G
Sbjct: 460 IYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGV 519
Query: 474 SWIE 477
S IE
Sbjct: 520 SLIE 523
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 46/375 (12%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALV--TLYAKCGSLDDALRTFEFSGNKNSITWSAMV 104
+ T +Q+H+ + NGL+S +SV L+ + G+L A + F+ + + ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 105 TGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFG 164
G AQS EK + L+ M GV P +T V+ ACS L G HG ++ GF
Sbjct: 85 RGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 165 LQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
L YV ++L+ +A CG L A F+ + V W+S+ +GY + G + A+ L+ +M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 225 QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ +++ ++ C KC +
Sbjct: 205 PYK----DQVAWNVMITGC-----------------------------------LKCKEM 225
Query: 285 DDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
D +F R +DV++WNAMISG G+ +AL +F +M G PD VT ++LLSAC
Sbjct: 226 DSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 345 SHMGLVDRGWDYFKMMSDEFDITPTV----EHYACMVDILSRAGKLNEAKEFIESAEVDH 400
+ +G ++ G + + ++ ++ + ++D+ ++ G ++ A E + D
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK-DR 344
Query: 401 GLCLWRILLGGCRNH 415
L W L+ G H
Sbjct: 345 DLSTWNTLIVGLALH 359
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 267/481 (55%), Gaps = 6/481 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S ++ G +A+ LF++M E+ N+F S+L L G Q+H K
Sbjct: 84 MISRFSRCGYHPDALLLFKEMH-REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG 142
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ V +AL++LYA+CG +++A F+ ++ ++W+AM+ GY + ++ + LF
Sbjct: 143 NCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLF 202
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G P FT ++ A + + ++HG ++KLGFG ++ SLV+ Y KC
Sbjct: 203 QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKC 262
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQ-NGDFEGALNLYGKMQIERIIPNELTMASV 239
GSLA+A + E ++ D++ T++ITG+ Q N A +++ M + +E+ ++S+
Sbjct: 263 GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSM 322
Query: 240 LKACSSLAALDQGKQMHAGIIKYG-FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
LK C+++A++ G+Q+H +K +V +G++L MYAK G ++D L F M +D
Sbjct: 323 LKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKD 382
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
V SW ++I+G ++G+ KA++L+++M E KP+ VTF++LLSACSH G + GW +
Sbjct: 383 VRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYD 442
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE--VDHGLCLWRILLGGCRNHR 416
M ++ I EH +C++D+L+R+G L EA I S E V W L CR H
Sbjct: 443 TMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARG-VAKEPGCSW 475
N + A +L+ + + Y+ L+S+Y A G W++ R++MK G K PG S
Sbjct: 503 NVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSL 562
Query: 476 I 476
+
Sbjct: 563 V 563
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 4/369 (1%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD 112
+H ++ NG S + + + L+ LY K G + A + F+ ++ ++W+AM++ +++ G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 113 SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS 172
AL LF MH V ++FT V+ +C DL + EG Q+HG K L V S+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
L+ +YA+CG + +AR F+ +++ D+V W ++I GY N + + +L+ M E P+
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
T S+L+A + L+ ++H IK GF + +L Y KCGSL + + +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 293 RMPTRDVISWNAMISGLS-QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
RD++S A+I+G S QN + A ++F M+ TK D V ++L C+ + V
Sbjct: 274 GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVT 333
Query: 352 RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK-EFIESAEVDHGLCLWRILLG 410
G I V ++D+ +++G++ +A F E E D + W L+
Sbjct: 334 IGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKD--VRSWTSLIA 391
Query: 411 GCRNHRNYD 419
G H N++
Sbjct: 392 GYGRHGNFE 400
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
LK CS Q +H I GF + + L +Y K G + +F R+ RDV
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW AMIS S+ G+ AL LF +M E K + T+ ++L +C +G + G
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG------ 132
Query: 360 MSDEFDITPTVEHYAC---------MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
I +VE C ++ + +R GK+ EA+ +S + + L W ++
Sbjct: 133 ----MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMID 187
Query: 411 G 411
G
Sbjct: 188 G 188
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 281/557 (50%), Gaps = 40/557 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++S G + +A +LF +M E G + F L+++LS + L GR++H A++
Sbjct: 255 VVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
Query: 61 GLLSIVSVANALVTLYAKC-------------------------------GSLDDALRTF 89
GL+ +SV NAL+ Y+K G +D A+ F
Sbjct: 315 GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
KN+IT++A++ G+ ++G KAL+LF M GV ++F+L ++AC +
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKK 434
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVV----LWTSII 205
Q+HG+ +K G + ++L+DM +C +ADA F+ Q P + TSII
Sbjct: 435 VSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD--QWPSNLDSSKATTSII 492
Query: 206 TGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF 264
GY +NG + A++L+ + E ++ +E+++ +L C +L + G Q+H +K G+
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
++ +G++L +MYAKC DD IF M DVISWN++IS +G++AL L+ +
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 325 MLLEGTKPDTVTFVNLLSACSHM--GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
M + KPD +T ++SA + + D F M +DI PT EHY V +L
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGH 672
Query: 383 AGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLL 442
G L EA++ I S V + + R LL CR H N + + ++ S Y+L
Sbjct: 673 WGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILK 732
Query: 443 SSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSEL 502
S+IY+A G W E++R M+ RG K P SWI ++ +H F D+ HPQ +I L
Sbjct: 733 SNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGL 792
Query: 503 RLLTKLMKDEGYQPHLD 519
+L GY+P+ +
Sbjct: 793 EILIMECLKVGYEPNTE 809
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 189/391 (48%), Gaps = 37/391 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG++ L L EA+++F +MR NE+ +IL+ R G Q+H L +K+
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 61 GLLSIVSVANALVTLYAK--CGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
G L+ V V+N+L++LY K S DD L+ F+ ++ +W+ +V+ + G S KA
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFD 270
Query: 119 LFHSMH-CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
LF+ M+ G FTL ++++C+D ++ GR++HG ++++G +L V ++L+ Y
Sbjct: 271 LFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFY 330
Query: 178 AKCGSLADARRGFEYVQQPDVVLWTSIIT------------------------------- 206
+K + +E + D V +T +IT
Sbjct: 331 SKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMA 390
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
G+ +NG AL L+ M + + ++ S + AC ++ +Q+H IK+G
Sbjct: 391 GFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAF 450
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTR--DVISWNAMISGLSQNGHGNKALELFDK 324
+ +AL M +C + D +F + P+ + ++I G ++NG +KA+ LF +
Sbjct: 451 NPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHR 510
Query: 325 MLLEGTK-PDTVTFVNLLSACSHMGLVDRGW 354
L E D V+ +L+ C +G + G+
Sbjct: 511 TLCEQKLFLDEVSLTLILAVCGTLGFREMGY 541
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 191/393 (48%), Gaps = 56/393 (14%)
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
+ NAL++ Y K G +A+ F + ++++A+++G+++ +AL++F M +G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 128 -VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK--CGSLA 184
V P+E+T V ++ AC + G Q+HG +K GF ++V +SL+ +Y K S
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-QIERIIPNELTMASVLKAC 243
D + F+ + Q DV W ++++ V+ G A +L+ +M ++E + T++++L +C
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 244 SSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK----------------------- 280
+ + L +G+++H I+ G E+ V +AL Y+K
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 281 --------CGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
G +D IF + ++ I++NA+++G +NGHG KAL+LF ML G +
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 333 DTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD---------ITPTVEHYACMVDILSRA 383
+ + + AC GLV K +S++ P ++ ++D+ +R
Sbjct: 416 TDFSLTSAVDAC---GLVSE-----KKVSEQIHGFCIKFGTAFNPCIQ--TALLDMCTRC 465
Query: 384 GKLNEAKEFIES--AEVDHGLCLWRILLGGCRN 414
++ +A+E + + +D I+ G RN
Sbjct: 466 ERMADAEEMFDQWPSNLDSSKATTSIIGGYARN 498
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 271/519 (52%), Gaps = 56/519 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GYA G +A+ELF++M N S++ L + +D + +
Sbjct: 146 MIDGYAQSGRIDKALELFDEM-----PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
++S ++ + L AK G +D+A R F+ +N I+W+AM+TGYAQ+ ++A +LF
Sbjct: 201 DVVSWTAMVDGL----AKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + G I R+M+ C
Sbjct: 257 QVMPERDFASWNTMITGFI----------RNREMN----------------------KAC 284
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASV 239
G F+ + + +V+ WT++ITGYV+N + E ALN++ KM + + PN T S+
Sbjct: 285 GL-------FDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR--MPTR 297
L ACS LA L +G+Q+H I K V SAL MY+K G L +F + R
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
D+ISWN+MI+ + +GHG +A+E++++M G KP VT++NLL ACSH GLV++G ++F
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
K + + + EHY C+VD+ RAG+L + FI + + +L C H
Sbjct: 458 KDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNE 517
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
I +K++E GS ++ YVL+S+IY A G+ E+ +R MK +G+ K+PGCSW++
Sbjct: 518 VSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVK 577
Query: 478 LKSLVHVFVVGDSMHPQ---IDEIRSELRLLTKLMKDEG 513
+ H+FVVGD HPQ +D I S+LR K+ K++
Sbjct: 578 VGKQNHLFVVGDKSHPQFEALDSILSDLR--NKMRKNKN 614
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 49/245 (20%)
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
L+ K G +A+AR+ F+ + + DVV WT +ITGY++ GD A L+ ++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---- 107
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
V +A+ + Y + L ++F
Sbjct: 108 ----------------------------------NVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
MP R+V+SWN MI G +Q+G +KALELFD+M + + V++ +++ A G +D
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDE 189
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG- 411
+ F+ M V + MVD L++ GK++EA+ + + + W ++ G
Sbjct: 190 AMNLFERMPRR-----DVVSWTAMVDGLAKNGKVDEARRLFDCMP-ERNIISWNAMITGY 243
Query: 412 CRNHR 416
+N+R
Sbjct: 244 AQNNR 248
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 46/248 (18%)
Query: 78 KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVG 137
K G + +A + F+ ++ +TW+ ++TGY + GD +A LF
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR--------------- 102
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
V+ R+ + +++V Y + L+ A F+ + + +
Sbjct: 103 -----------VDSRK------------NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN 139
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
VV W ++I GY Q+G + AL L+ +M I+ + S++KA +D+ +
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFE 195
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNK 317
+ + +V +A+ AK G +D+ +F MP R++ISWNAMI+G +QN ++
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 318 ALELFDKM 325
A +LF M
Sbjct: 252 ADQLFQVM 259
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 266/492 (54%), Gaps = 45/492 (9%)
Query: 61 GLLSIVSVAN-ALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GLL +V + + AL+T + ++ S ++ +++W++ + ++G +A +
Sbjct: 2 GLLPVVGITSPALIT---HKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKE 58
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVE--GRQMHGYSLKLGFGL-QLYVLSSLVDM 176
F M +GV P+ T + +++ C D + E G +HGY+ KLG + V ++++ M
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM------------ 224
Y+K G AR F+Y++ + V W ++I GY+++G + A ++ KM
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 225 -------------------QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN 265
QI + P+ + + + L AC++L AL G +H ++ F
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
V V ++L +Y +CG ++ +F+ M R V+SWN++I G + NG+ +++L F KM
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
+G KPD VTF L+ACSH+GLV+ G YF++M ++ I+P +EHY C+VD+ SRAG+
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 386 LNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM----ELGSPESSAYVL 441
L +A + ++S + + LL C NH N + A E+LM +L S YV+
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA---ERLMKHLTDLNVKSHSNYVI 415
Query: 442 LSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSE 501
LS++Y A G+WE +RR MK G+ K+PG S IE+ +HVF+ GD+ H + IR
Sbjct: 416 LSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREV 475
Query: 502 LRLLTKLMKDEG 513
L L++ ++ +G
Sbjct: 476 LELISSDLRLQG 487
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 34/245 (13%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++G+ G +EA+ F +M+ + + ++ ++ + N L G VH +
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA-LSFGLWVHRYVLSQ 235
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ V V+N+L+ LY +CG ++ A + F + ++W++++ G+A +G++ ++L F
Sbjct: 236 DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYF 295
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G P T G + ACS + + E GL+ + + KC
Sbjct: 296 RKMQEKGFKPDAVTFTGALTACSHVGLVEE-------------GLRYFQI-------MKC 335
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+Y P + + ++ Y + G E AL L M ++ PNE+ + S+L
Sbjct: 336 ----------DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK---PNEVVIGSLL 382
Query: 241 KACSS 245
ACS+
Sbjct: 383 AACSN 387
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 256/483 (53%), Gaps = 23/483 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ Y G EAI LF M N LTS+L G+ +H A+K
Sbjct: 372 MIASYEQAGQHDEAISLFRDMM-RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA 430
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ S + A A++++YAKCG AL+ FE K+++ ++A+ GY Q GD+ KA ++
Sbjct: 431 DIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVY 490
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+M GV P T+VG++ C+ G ++G +K GF + +V +L++M+ KC
Sbjct: 491 KNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKC 550
Query: 181 GSLADA-----RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
+LA A + GFE V W ++ GY+ +G E A+ + +M++E+ PN +T
Sbjct: 551 DALAAAIVLFDKCGFE----KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
++++A + L+AL G +H+ +I+ GF + PVG++L MYAKCG ++ F +
Sbjct: 607 FVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS 666
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
+ ++SWN M+S + +G + A+ LF M KPD+V+F+++LSAC H GLV+ G
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
F+ M + I VEHYACMVD+L +AG EA E + V + +W LL R H
Sbjct: 727 IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
N + A +L++L S Y S LG+ +V ++++ P CSW
Sbjct: 787 CNLWLSNAALCQLVKLEPLNPSHY----SQDRRLGEVNNVSRIKKV---------PACSW 833
Query: 476 IEL 478
IE+
Sbjct: 834 IEV 836
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 207/414 (50%), Gaps = 10/414 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMR--CEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
M+SG A G + A+ LF MR C + + + + L +S L ++ D R +H L +
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKS---DVCRCLHGLVI 228
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K G I + ++ L+ +Y C L A FE K+ +W M+ YA +G E+ L
Sbjct: 229 KKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLE 286
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M V ++ + A + + +V+G +H Y+++ G + V +SL+ MY+
Sbjct: 287 LFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYS 346
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG L A + F ++ DVV W+++I Y Q G + A++L+ M I PN +T+ S
Sbjct: 347 KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS 406
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL+ C+ +AA GK +H IK E+ +A+ +MYAKCG F R+P +D
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG-WDYF 357
+++NA+ G +Q G NKA +++ M L G PD+ T V +L C+ RG Y
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+++ FD V H ++++ ++ L A + + W I++ G
Sbjct: 527 QIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNG 578
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 197/395 (49%), Gaps = 5/395 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY GL +EA+ F M E+ +++ T L + G ++H L +
Sbjct: 70 MIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEM 129
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S V + ALV +Y K L A + F+ K+ +TW+ MV+G AQ+G S AL LF
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS-LVDMYAK 179
H M V +L +I A S L R +HG +K GF ++ SS L+DMY
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCN 246
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C L A FE V + D W +++ Y NG FE L L+ M+ + N++ AS
Sbjct: 247 CADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASA 306
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L+A + + L +G +H ++ G +V V ++L +MY+KCG L+ +F + RDV
Sbjct: 307 LQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDV 366
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SW+AMI+ Q G ++A+ LF M+ KP+ VT ++L C+ + R
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA-ASRLGKSIHC 425
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+ + DI +E ++ + ++ G+ + A + E
Sbjct: 426 YAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 7/275 (2%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
QVH + +GL N L+ Y+ D + F+ + + W++M+ GY ++G
Sbjct: 23 QVHGSLIVSGL----KPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 112 DSEKALRLFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
+AL F M G+ P +++ + AC+ +G ++H ++G +Y+
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
++LV+MY K L AR+ F+ + DVV W ++++G QNG AL L+ M+ +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
+ +++ +++ A S L D + +H +IK GF S L MY C L +
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESV 256
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
F + +D SW M++ + NG + LELFD M
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER-IIPNELTMASVLKACS 244
+R F+ V+ P VVLW S+I GY + G AL +G M E+ I P++ + LKAC+
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
+G ++H I + G +V +G+AL MY K L +F +M +DV++WN
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
M+SGL+QNG + AL LF M D V+ NL+ A S +
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 271/551 (49%), Gaps = 38/551 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++ YA L +E I +++M + + F S+L T + GR VH +
Sbjct: 115 LIASYAKNELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS 173
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S + V NAL+++Y + ++ A R F+ +++++W+A++ YA G +A LF
Sbjct: 174 SYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELF 233
Query: 121 HSMHCSGV--------------------------------LPSEFTLVGVI---NACSDL 145
M SGV P+ V +I ACS +
Sbjct: 234 DKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLI 293
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSII 205
AI G+++HG ++ + V ++L+ MY+KC L A F ++ + W SII
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSII 353
Query: 206 TGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG-F 264
+GY Q E A +L +M + PN +T+AS+L C+ +A L GK+ H I++ F
Sbjct: 354 SGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCF 413
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
+ ++L +YAK G + + M RD +++ ++I G G G AL LF +
Sbjct: 414 KDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKE 473
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAG 384
M G KPD VT V +LSACSH LV G F M E+ I P ++H++CMVD+ RAG
Sbjct: 474 MTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAG 533
Query: 385 KLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSS 444
L +AK+ I + W LL C H N IG +A EKL+E+ YVL+++
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIAN 593
Query: 445 IYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRL 504
+Y A G W + VR +M+ GV K+PGC+WI+ S +F VGD+ P+ L
Sbjct: 594 MYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDG 653
Query: 505 LTKLMKDE-GY 514
L +LMKD GY
Sbjct: 654 LNQLMKDNAGY 664
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 190/425 (44%), Gaps = 39/425 (9%)
Query: 6 ASLGLAKEAIELFEQMRCEEEEG-ENEFVL---TSILSDLNRTEFLDTGRQVHSLAMKNG 61
AS G +A + F +R + ++ VL S+LS G QVH+ + +G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 62 LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFH 121
+ + LVT Y+ ++A E S + + W+ ++ YA++ E+ + +
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
M G+ P FT V+ AC + + GR +HG + LYV ++L+ MY +
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFR 193
Query: 182 SLADARRGFEYVQQPDVVLWTSIITGY--------------------------------- 208
++ ARR F+ + + D V W ++I Y
Sbjct: 194 NMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISG 253
Query: 209 --VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
+Q G++ GAL L +M+ + + M LKACS + A+ GK++H I ++
Sbjct: 254 GCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDG 313
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
V + L MY+KC L ++F + + +WN++ISG +Q +A L +ML
Sbjct: 314 IDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREML 373
Query: 327 LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKL 386
+ G +P+++T ++L C+ + + G ++ + + +VD+ +++GK+
Sbjct: 374 VAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 387 NEAKE 391
AK+
Sbjct: 434 VAAKQ 438
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/351 (39%), Positives = 225/351 (64%), Gaps = 7/351 (1%)
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER-- 228
+S+V+ YAK G + DAR+ F+ + + +V+ W+ +I GYV G ++ AL+L+ +MQ+ +
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 229 ---IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
+ PNE TM++VL AC L AL+QGK +HA I KY +++ +G+AL MYAKCGSL+
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 286 DGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFDKMLL-EGTKPDTVTFVNLLSA 343
+F + ++ DV +++AMI L+ G ++ +LF +M + P++VTFV +L A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 344 CSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC 403
C H GL++ G YFKMM +EF ITP+++HY CMVD+ R+G + EA+ FI S ++ +
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 404 LWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMK 463
+W LL G R + A ++L+EL S AYVLLS++Y G+W +V+ +R M+
Sbjct: 372 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Query: 464 ARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
+G+ K PGCS++E++ +VH FVVGD + + I + L + + +++ GY
Sbjct: 432 VKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGY 482
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 13/289 (4%)
Query: 29 ENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRT 88
++ FV TS+L+ + L + ++V + L + SV NA YAK G +DDA +
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA----YAKAGLIDDARKL 150
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG-----VLPSEFTLVGVINACS 143
F+ +N I+WS ++ GY G ++AL LF M V P+EFT+ V++AC
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV-QQPDVVLWT 202
L A+ +G+ +H Y K + + + ++L+DMYAKCGSL A+R F + + DV ++
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 203 SIITGYVQNGDFEGALNLYGKMQI-ERIIPNELTMASVLKACSSLAALDQGKQMHAGII- 260
++I G + L+ +M + I PN +T +L AC +++GK +I
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Query: 261 KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISG 308
++G + + +Y + G + + MP DV+ W +++SG
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 11/230 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEE----GENEFVLTSILSDLNRTEFLDTGRQVHSL 56
+++GY G KEA++LF +M+ + NEF ++++LS R L+ G+ VH+
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSI-TWSAMVTGYAQSGDSEK 115
K + + + AL+ +YAKCGSL+ A R F G+K + +SAM+ A G +++
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 116 ALRLFHSMHCS-GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL-KLGFGLQLYVLSSL 173
+LF M S + P+ T VG++ AC I EG+ + + G + +
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 174 VDMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDF---EGALN 219
VD+Y + G + +A + +PDV++W S+++G GD EGAL
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALK 394
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 40/235 (17%)
Query: 200 LWTSIITGYVQN---GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
LW II V N +++Y +M+ R+ P+ T +L + + L G++ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSL-------------------------------D 285
A I+ +G + + V ++L MY+ CG L D
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-----TKPDTVTFVNL 340
D +F MP R+VISW+ +I+G G +AL+LF +M L +P+ T +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 341 LSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
LSAC +G +++G + D++ + + ++D+ ++ G L AK +
Sbjct: 206 LSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 260/508 (51%), Gaps = 33/508 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQM--------RC-------------------EEEEGE--NE 31
++SGY GL EA+ LF +M C + EG +
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDG 238
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF-- 89
F L L + L G+Q+H +K+GL S +AL+ +Y+ CGSL A F
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ 298
Query: 90 -EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
+ + N + W++M++G+ + ++E AL L ++ S + +TL G + C + +
Sbjct: 299 EKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNL 358
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
G Q+H + G+ L V S LVD++A G++ DA + F + D++ ++ +I G
Sbjct: 359 RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGC 418
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
V++G A L+ ++ + ++ ++++LK CSSLA+L GKQ+H IK G+ E
Sbjct: 419 VKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
+AL MY KCG +D+G ++F M RDV+SW +I G QNG +A F KM+
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G +P+ VTF+ LLSAC H GL++ + M E+ + P +EHY C+VD+L +AG E
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
A E I ++ +W LL C H+N + EKL++ + S Y LS+ Y
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYAT 658
Query: 449 LGQWEDVELVRRMMKARGVAKEPGCSWI 476
LG W+ + VR K G AKE G SWI
Sbjct: 659 LGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 192/387 (49%), Gaps = 35/387 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY S G +AIEL+ +M EEE NEF+ +++L + G V+ K
Sbjct: 77 MVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L V + N++V +Y K G L +A +F+ +S +W+ +++GY ++G ++A+ LF
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 121 HSM--------HC----------------------SGVLPSEFTLVGVINACSDLCAIVE 150
H M +C G++ F L + ACS +
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL---ADARRGFEYVQQPDVVLWTSIITG 207
G+Q+H +K G + +S+L+DMY+ CGSL AD + V +W S+++G
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 208 YVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
++ N + E AL L ++ + + T++ LK C + L G Q+H+ ++ G+ L+
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLL 327
VGS L ++A G++ D + +F R+P +D+I+++ +I G ++G + A LF +++
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGW 354
G D N+L CS L GW
Sbjct: 437 LGLDADQFIVSNILKVCS--SLASLGW 461
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 182/435 (41%), Gaps = 58/435 (13%)
Query: 43 RTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSA 102
+ + G + + +K G+ V +AN ++++Y L DA + F+ +N +TW+
Sbjct: 17 KVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTT 76
Query: 103 MVTGYAQSGDSEKALRLFHSMHCS-GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL 161
MV+GY G KA+ L+ M S +EF V+ AC + I G ++ K
Sbjct: 77 MVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLY 221
+ +++S+VDMY K G L +A F+ + +P W ++I+GY + G + A+ L+
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 222 G------------------------------KMQIERIIPNELTMASVLKACSSLAALDQ 251
+MQ E ++ + + LKACS L
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR---MPTRDVISWNAMISG 308
GKQ+H ++K G SAL MY+ CGSL +F + V WN+M+SG
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 309 LSQNGHGNKALEL----------FDKMLLEGTKPDTVTFVNL-LSACSHMGLVDRGWDYF 357
N AL L FD L G + +VNL L H +V G++
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
++ + +VD+ + G + +A + + + + L+ GC
Sbjct: 377 YIVG------------SILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGF 423
Query: 418 YDIGAYAGEKLMELG 432
+ Y +L++LG
Sbjct: 424 NSLAFYLFRELIKLG 438
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+A+ L+ C + A +G+ + A +IK G + V + + + +MY L D + +F M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKML-LEGTKPDTVTFVNLLSACSHMGLVDRGW 354
R++++W M+SG + +G NKA+EL+ +ML E + + +L AC +G + G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA----KEFIESAEVDHGLCLWRILLG 410
++ + E ++ V +VD+ + G+L EA KE + + W L+
Sbjct: 128 LVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS-----WNTLIS 181
Query: 411 G 411
G
Sbjct: 182 G 182
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 255/493 (51%), Gaps = 36/493 (7%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L T +Q H + GL + + G L A F N+ + M+
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 107 YA---QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF 163
+ + A+ ++ + P FT V+ + + GRQ+HG + GF
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 164 GLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDV------------------------- 198
++V++ L+ MY CG L DAR+ F+ + DV
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 199 --------VLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALD 250
V WT +I+GY ++G A+ ++ +M +E + P+E+T+ +VL AC+ L +L+
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 251 QGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLS 310
G+++ + + G N V + +A+ MYAK G++ +F + R+V++W +I+GL+
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTV 370
+GHG +AL +F++M+ G +P+ VTF+ +LSACSH+G VD G F M ++ I P +
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNI 387
Query: 371 EHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLME 430
EHY CM+D+L RAGKL EA E I+S +W LL H + ++G A +L++
Sbjct: 388 EHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK 447
Query: 431 LGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDS 490
L S Y+LL+++Y+ LG+W++ ++R MMK GV K G S IE+++ V+ F+ GD
Sbjct: 448 LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDL 507
Query: 491 MHPQIDEIRSELR 503
HPQ++ I L+
Sbjct: 508 THPQVERIHEILQ 520
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 118/218 (54%), Gaps = 5/218 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGYA G A EAIE+F++M E E +E L ++LS L+ G ++ S
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVE-PDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ VS+ NA++ +YAK G++ AL FE +N +TW+ ++ G A G +AL +F
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV--LSSLVDMYA 178
+ M +GV P++ T + +++ACS + + G+++ S++ +G+ + ++D+
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN-SMRSKYGIHPNIEHYGCMIDLLG 398
Query: 179 KCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFE 215
+ G L +A + + + + +W S++ + D E
Sbjct: 399 RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 268 bits (684), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 245/417 (58%), Gaps = 3/417 (0%)
Query: 62 LLSIVSVANALVTLYAKCGSL-DDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L S V +++ LV Y+K L +L F +N +W+ ++ +++SG + K++ LF
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 121 HSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M S V P +FTL ++ ACS G +H LKLGF L+V S+LV MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G L AR+ F+ + D VL+T++ GYVQ G+ L ++ +M + + M S+
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L AC L AL GK +H I+ L + +G+A++ MY KC LD + +F M RDV
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
ISW+++I G +G + +LFD+ML EG +P+ VTF+ +LSAC+H GLV++ W YF++
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 361
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M E++I P ++HYA + D +SRAG L EA++F+E V + +L GC+ + N +
Sbjct: 362 M-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVE 420
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
+G +L++L ++S YV L+ +Y+A G++++ E +R+ MK + ++K PGCS I
Sbjct: 421 VGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 179/391 (45%), Gaps = 46/391 (11%)
Query: 5 YASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLS 64
++ G A ++I+LF +M E ++F L IL + + +G +H L +K G S
Sbjct: 108 FSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSS 167
Query: 65 IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH 124
+ V++ALV +Y G L A + F+ ++S+ ++AM GY Q G++ L +F M
Sbjct: 168 SLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMG 227
Query: 125 CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLA 184
SG +V ++ AC L A+ G+ +HG+ ++ L L + +++ DMY KC L
Sbjct: 228 YSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILD 287
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
A F + + DV+ W+S+I GY +GD + L+ +M E I PN +T VL AC+
Sbjct: 288 YAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS--- 301
H G++ + +L F M +++
Sbjct: 348 -----------HGGLV------------------------EKSWLYFRLMQEYNIVPELK 372
Query: 302 -WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+ ++ +S+ G +A + + M KPD +LS C G V+ G ++
Sbjct: 373 HYASVADCMSRAGLLEEAEKFLEDM---PVKPDEAVMGAVLSGCKVYGNVEVGE---RVA 426
Query: 361 SDEFDITP-TVEHYACMVDILSRAGKLNEAK 390
+ + P +Y + + S AG+ +EA+
Sbjct: 427 RELIQLKPRKASYYVTLAGLYSAAGRFDEAE 457
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 229/434 (52%), Gaps = 40/434 (9%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
V + L+ Y+ G + +A + F+ ++ I W+ MV+ Y + D + A L + M
Sbjct: 904 VKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM-- 961
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
SE N + C L++ Y G+L
Sbjct: 962 -----SE------KNEATSNC--------------------------LINGYMGLGNLEQ 984
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS 245
A F + D++ WT++I GY QN + A+ ++ KM E IIP+E+TM++V+ AC+
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
L L+ GK++H ++ GF L+V +GSAL MY+KCGSL+ L+F+ +P +++ WN++
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD 365
I GL+ +G +AL++F KM +E KP+ VTFV++ +AC+H GLVD G ++ M D++
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 366 ITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAG 425
I VEHY MV + S+AG + EA E I + E + +W LL GCR H+N I A
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAF 1224
Query: 426 EKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE-PGCSWIELKSLVHV 484
KLM L S Y LL S+Y +W DV +R M+ G+ K PG S I + H+
Sbjct: 1225 NKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHL 1284
Query: 485 FVVGDSMHPQIDEI 498
F D H DE+
Sbjct: 1285 FAAADKSHSASDEV 1298
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 182/362 (50%), Gaps = 45/362 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQV-HSLAMK 59
++ Y++ G +EA ++F++M ++ T+++S R +D+ + + ++ K
Sbjct: 910 LIDFYSATGRIREARKVFDEM-----PERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK 964
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
N + +N L+ Y G+L+ A F K+ I+W+ M+ GY+Q+ +A+ +
Sbjct: 965 NE-----ATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAV 1019
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F+ M G++P E T+ VI+AC+ L + G+++H Y+L+ GF L +Y+ S+LVDMY+K
Sbjct: 1020 FYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK 1079
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CGSL A F + + ++ W SII G +G + AL ++ KM++E + PN +T SV
Sbjct: 1080 CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
AC+ +D+G++++ +I D Y I +V
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMI-------------------------DDYSI-----VSNV 1169
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS-HMGLVDRGWDYFK 358
+ M+ S+ G +ALEL M E P+ V + LL C H LV + K
Sbjct: 1170 EHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDGCRIHKNLVIAEIAFNK 1226
Query: 359 MM 360
+M
Sbjct: 1227 LM 1228
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 78/339 (23%)
Query: 193 VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG 252
+Q+P+V ++ ++ G+V +L LY +M + + P+ T +S++KA S + G
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--G 888
Query: 253 KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQ- 311
+ + A I K+GF V + + L Y+ G + + +F MP RD I+W M+S +
Sbjct: 889 ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV 948
Query: 312 -------------------------NGH---GN--KALELFDKM---------------- 325
NG+ GN +A LF++M
Sbjct: 949 LDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYS 1008
Query: 326 ---------------LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTV 370
+ EG PD VT ++SAC+H+G+++ G + M + + V
Sbjct: 1009 QNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKE-VHMYTLQNGFVLDV 1067
Query: 371 EHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKL-- 428
+ +VD+ S+ G L A + + C W ++ G H +A E L
Sbjct: 1068 YIGSALVDMYSKCGSLERALLVFFNLPKKNLFC-WNSIIEGLAAH------GFAQEALKM 1120
Query: 429 ---MELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKA 464
ME+ S + +A V S++TA V+ RR+ ++
Sbjct: 1121 FAKMEMESVKPNA-VTFVSVFTACTHAGLVDEGRRIYRS 1158
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 240/434 (55%), Gaps = 8/434 (1%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G QVH LA+K G V+NA +T+Y+ A + FE K+ +TW+ M++ Y Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
+ + A+ ++ MH GV P EFT ++ DL + + +K G ++ +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEI 423
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG-DFEGALNLYGKMQIE- 227
++L+ Y+K G + A FE + +++ W +II+G+ NG FEG ++ E
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
RI+P+ T++++L C S ++L G Q HA ++++G E +G+AL MY++CG++ +
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 288 YLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSH 346
+F +M +DV+SWN++IS S++G G A+ + M EG PD TF +LSACSH
Sbjct: 544 LEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSH 603
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG--LCL 404
GLV+ G + F M + + V+H++C+VD+L RAG L+EA+ ++ +E G + +
Sbjct: 604 AGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDV 663
Query: 405 WRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKA 464
W L C H + +G + LME + S YV LS+IY G W++ E RR +
Sbjct: 664 WWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINM 723
Query: 465 RGVAKEPGCSWIEL 478
G K+ GCSW+ L
Sbjct: 724 IGAMKQRGCSWMRL 737
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 186/348 (53%), Gaps = 14/348 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S Y L K A+ ++++M + +EF S+L+ + LD V + +K
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVK-PDEFTFGSLLAT---SLDLDVLEMVQACIIKF 415
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S + ++NAL++ Y+K G ++ A FE S KN I+W+A+++G+ +G + L F
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Query: 121 HSMHCSGV--LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
+ S V LP +TL +++ C +++ G Q H Y L+ G + + ++L++MY+
Sbjct: 476 SCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMA 237
+CG++ ++ F + + DVV W S+I+ Y ++G+ E A+N Y MQ E ++IP+ T +
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFS 595
Query: 238 SVLKACSSLAALDQGKQMHAGIIKY-GFNLEVPVGSALSAMYAKCGSLDDG---YLIFWR 293
+VL ACS +++G ++ ++++ G V S L + + G LD+ I +
Sbjct: 596 AVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEK 655
Query: 294 MPTRDVISWNAMISGLSQNGHGNKAL-ELFDKMLLEGTKPDTVTFVNL 340
V W A+ S + HG+ L ++ K+L+E K D +V L
Sbjct: 656 TIGSRVDVWWALFSACA--AHGDLKLGKMVAKLLMEKEKDDPSVYVQL 701
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 204/450 (45%), Gaps = 56/450 (12%)
Query: 2 LSGYASLGLAKEAIELFEQM-RCEEEEGENEFVLTSILS--DLNRTEFLDTGRQVHSLAM 58
L+G G + A++LF + RC + V +I + L T F G QVH A+
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIF---GGQVHCYAI 84
Query: 59 KNGLLSIVSVANALVTLYAKCGSL-------------------------------DDALR 87
++GLL V+N L++LY + G+L + A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 88 TFEFSGNKNSIT-WSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC 146
F+ ++ + W+AM+TG +SG E ++ LF MH GV +F +++ C D
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYG 203
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY--VQQPDVVLWTSI 204
++ G+Q+H +K GF + V+++L+ MY C + DA FE V D V + +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 205 ITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF 264
I G E L ++ KM + P +LT SV+ +CS A G Q+H IK G+
Sbjct: 264 IDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGY 319
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
V +A MY+ + +F + +D+++WN MIS +Q G A+ ++ +
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD---EFDITPTVEHYACMVDILS 381
M + G KPD TF +LL+ + D +M+ +F ++ +E ++ S
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDL-------DVLEMVQACIIKFGLSSKIEISNALISAYS 432
Query: 382 RAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
+ G++ +A E + + L W ++ G
Sbjct: 433 KNGQIEKADLLFERS-LRKNLISWNAIISG 461
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 124/254 (48%), Gaps = 11/254 (4%)
Query: 1 MLSGYASLGLAKEAIELFE-QMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
++SG+ G E +E F + E + + L+++LS T L G Q H+ ++
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+G + NAL+ +Y++CG++ ++L F K+ ++W+++++ Y++ G+ E A+
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 120 FHSMHCSG-VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL-GFGLQLYVLSSLVDMY 177
+ +M G V+P T V++ACS + EG ++ ++ G + S LVD+
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLL 637
Query: 178 AKCGSLADARRGFEYVQQP---DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
+ G L +A + ++ V +W ++ + +GD + GKM + ++ E
Sbjct: 638 GRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLK-----LGKMVAKLLMEKEK 692
Query: 235 TMASVLKACSSLAA 248
SV S++ A
Sbjct: 693 DDPSVYVQLSNIYA 706
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 254/482 (52%), Gaps = 8/482 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY+ + A +F Q+R + + F + L +R + G +H +A+++
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLT-LDRFSFITTLKSCSRELCVSIGEGLHGIALRS 154
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G + + NAL+ Y CG + DA + F E + +++T+S ++ GY Q AL L
Sbjct: 155 GFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDL 214
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M S V+ + TL+ ++A SDL + H +K+G L L+++++L+ MY K
Sbjct: 215 FRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGK 274
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G ++ ARR F+ + DVV W +I Y + G E + L +M+ E++ PN T +
Sbjct: 275 TGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGL 334
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L +C+ A G+ + + + L+ +G+AL MYAK G L+ IF RM +DV
Sbjct: 335 LSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDV 394
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTK--PDTVTFVNLLSACSHMGLVDRGWDYF 357
SW AMISG +G +A+ LF+KM E K P+ +TF+ +L+ACSH GLV G F
Sbjct: 395 KSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCF 454
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
K M + + TP VEHY C+VD+L RAG+L EA E I + + WR LL CR + N
Sbjct: 455 KRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN 514
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
D+G +L E+G + +LL+ + G E L + K R KE G S IE
Sbjct: 515 ADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK-SLDNELNKGR---KEAGYSAIE 570
Query: 478 LK 479
++
Sbjct: 571 IE 572
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 164/328 (50%), Gaps = 3/328 (0%)
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
FE N N ++ M+ GY+ S + E+A +F+ + G+ F+ + + +CS +
Sbjct: 82 FEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCV 141
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF-EYVQQPDVVLWTSIITG 207
G +HG +L+ GF + + ++L+ Y CG ++DAR+ F E Q D V +++++ G
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNG 201
Query: 208 YVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
Y+Q AL+L+ M+ ++ N T+ S L A S L L + H IK G +L+
Sbjct: 202 YLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD 261
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLL 327
+ + +AL MY K G + IF +DV++WN MI ++ G + + L +M
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLN 387
E KP++ TFV LLS+C++ G ++ +E + A +VD+ ++ G L
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA-LVDMYAKVGLLE 380
Query: 388 EAKEFIESAEVDHGLCLWRILLGGCRNH 415
+A E + D + W ++ G H
Sbjct: 381 KAVEIFNRMK-DKDVKSWTAMISGYGAH 407
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 258/512 (50%), Gaps = 44/512 (8%)
Query: 2 LSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNG 61
+SG G ++A +F R G N + S+L E G Q+H LAMK+G
Sbjct: 104 VSGLLENGFCRDAFRMFGDARVSGS-GMNSVTVASVLGGCGDIE---GGMQLHCLAMKSG 159
Query: 62 LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFH 121
V V +LV++Y++CG A R FE +K+ +T++A ++G ++G +F+
Sbjct: 160 FEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFN 219
Query: 122 SMH-CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M S P++ T V I AC+ L + GRQ+HG +K F + V ++L+DMY+KC
Sbjct: 220 LMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKC 279
Query: 181 GSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT---- 235
A F E +++ W S+I+G + NG E A+ L+ K+ E + P+ T
Sbjct: 280 RCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSL 339
Query: 236 -------------------------------MASVLKACSSLAALDQGKQMHAGIIKYGF 264
+ S+L ACS + L GK++H +IK
Sbjct: 340 ISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAA 399
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRM--PTRDVISWNAMISGLSQNGHGNKALELF 322
++ V ++L MY KCG IF R +D + WN MISG ++G A+E+F
Sbjct: 400 ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
+ + E +P TF +LSACSH G V++G F++M +E+ P+ EH CM+D+L R
Sbjct: 460 ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGR 519
Query: 383 AGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLL 442
+G+L EAKE I+ LLG CR H + +G A KL EL + +V+L
Sbjct: 520 SGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVIL 578
Query: 443 SSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
SSIY AL +WEDVE +R+++ + + K PG S
Sbjct: 579 SSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 191/356 (53%), Gaps = 13/356 (3%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
N+F +L + + GR +H+ +K G V A ALV++Y K + DAL+
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 90 EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIV 149
+ + + +A V+G ++G A R+F SG + T+ V+ C D I
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IE 146
Query: 150 EGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
G Q+H ++K GF +++YV +SLV MY++CG A R FE V VV + + I+G +
Sbjct: 147 GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 210 QNGDFE---GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
+NG NL K E PN++T + + AC+SL L G+Q+H ++K F
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMP-TRDVISWNAMISGLSQNGHGNKALELFDKM 325
E VG+AL MY+KC Y++F + TR++ISWN++ISG+ NG A+ELF+K+
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILS 381
EG KPD+ T+ +L+S S +G V + +F+ M + P+++ C+ +LS
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLK---CLTSLLS 376
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 170/337 (50%), Gaps = 9/337 (2%)
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P++FT ++ +C+ L +V+GR +H +K GF + ++ ++LV MY K + DA +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
+ + + + + ++G ++NG A ++G ++ N +T+ASVL C +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
+ G Q+H +K GF +EV VG++L +MY++CG +F ++P + V+++NA ISGL
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 310 SQNGHGNKALELFDKML-LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM-MSDEFDIT 367
+NG N +F+ M +P+ VTFVN ++AC+ + + G + M EF
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
V ++D+ S+ A + L W ++ G + ++ EK
Sbjct: 266 TMVG--TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 428 LMELG-SPESSAYVLLSSIYTALGQ-WEDVELVRRMM 462
L G P+S+ + L S ++ LG+ E + RM+
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 22/199 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQM---------RCEEEEGENEFVLTSILSDLNRTEFLDTGR 51
++SG++ LG EA + FE+M +C LTS+LS + L G+
Sbjct: 339 LISGFSQLGKVIEAFKFFERMLSVVMVPSLKC----------LTSLLSACSDIWTLKNGK 388
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEF--SGNKNSITWSAMVTGYAQ 109
++H +K + V +L+ +Y KCG A R F+ K+ + W+ M++GY +
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG-YSLKLGFGLQLY 168
G+ E A+ +F + V PS T V++ACS + +G Q+ + G+
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 169 VLSSLVDMYAKCGSLADAR 187
+ ++D+ + G L +A+
Sbjct: 509 HIGCMIDLLGRSGRLREAK 527
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 272/515 (52%), Gaps = 49/515 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGY GL ++AI + + MR E+ + + L +++S RTE L G++V +++
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDC-VTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S + +A+ ++ +YAKCGS+ DA + F+ + K+ I W+ ++ YA+SG S +ALRLF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M GV P+ T L +LS L +
Sbjct: 465 YGMQLEGVPPNVITW------------------------------NLIILSLL-----RN 489
Query: 181 GSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
G + +A+ F +Q P+++ WT+++ G VQNG E A+ KMQ + PN ++
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLE----VPVGSALSAMYAKCGSLDDGYLIFW 292
L AC+ LA+L G+ +H II+ NL+ V + ++L MYAKCG ++ +F
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIR---NLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
++ NAMIS + G+ +A+ L+ + G KPD +T N+LSAC+H G +++
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC 412
+ F + + + P +EHY MVD+L+ AG+ +A IE + + L+ C
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 413 RNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPG 472
R ++ Y KL+E S YV +S+ Y G W++V +R MMKA+G+ K+PG
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 473 CSWIEL--KSLVHVFVVGDSMHPQIDEIRSELRLL 505
CSWI++ + VHVFV D H +I+EI+ L LL
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 215/390 (55%), Gaps = 2/390 (0%)
Query: 8 LGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVS 67
+GL + A+ F +M E E + FV+ ++ ++ GR VH +K+GL V
Sbjct: 151 IGLCEGALMGFVEM-LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
VA++L +Y KCG LDDA + F+ ++N++ W+A++ GY Q+G +E+A+RLF M G
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR 187
V P+ T+ ++A +++ + EG+Q H ++ G L + +SL++ Y K G + A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 188 RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA 247
F+ + + DVV W II+GYVQ G E A+ + M++E++ + +T+A+++ A +
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
L GK++ I++ F ++ + S + MYAKCGS+ D +F +D+I WN +++
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLA 449
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
+++G +AL LF M LEG P+ +T+ ++ + G VD D F M I
Sbjct: 450 AYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GII 508
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAE 397
P + + M++ + + G EA F+ +
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 194/370 (52%), Gaps = 10/370 (2%)
Query: 47 LDTGRQVHSLAMKNGLLSIVS--VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMV 104
L TG+Q+H+ +KNG + + LV YAKC +L+ A F +N +W+A++
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 105 TGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFG 164
+ G E AL F M + + P F + V AC L GR +HGY +K G
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 165 LQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
++V SSL DMY KCG L DA + F+ + + V W +++ GYVQNG E A+ L+ M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 225 QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ + + P +T+++ L A +++ +++GKQ HA I G L+ +G++L Y K G +
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 285 DDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
+ ++F RM +DV++WN +ISG Q G A+ + M LE K D VT L+SA
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 345 SHMGLVDRGWD---YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG 401
+ + G + Y S E DI + ++D+ ++ G + +AK+ +S V+
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLA----STVMDMYAKCGSIVDAKKVFDST-VEKD 440
Query: 402 LCLWRILLGG 411
L LW LL
Sbjct: 441 LILWNTLLAA 450
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 188/395 (47%), Gaps = 32/395 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY G +EAI LF MR + E V T + + N ++ G+Q H++A+ N
Sbjct: 245 LMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG-VEEGKQSHAIAIVN 303
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ + +L+ Y K G ++ A F+ K+ +TW+ +++GY Q G E A+ +
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + TL +++A + + G+++ Y ++ F + + S+++DMYAKC
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
GS+ DA++ F+ + D++LW +++ Y ++G AL L+ MQ+E + PN +T ++
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
+ +D+ K M + G +P ++I
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGI---IP----------------------------NLI 512
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
SW M++G+ QNG +A+ KM G +P+ + LSAC+H+ + G +
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI 572
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
+ V +VD+ ++ G +N+A++ S
Sbjct: 573 IRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 191 EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALD 250
E P + ++ +NG+ + AL+L +M + +L+ C L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 251 QGKQMHAGIIKYG--FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISG 308
GKQ+HA I+K G + + + L YAKC +L+ ++F ++ R+V SW A+I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 309 LSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITP 368
+ G AL F +ML PD N+ AC + W F + +
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGAL-----KWSRFGRGVHGYVVKS 202
Query: 369 TVEH----YACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRN 417
+E + + D+ + G L++A + + + + +++G +N +N
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 273/552 (49%), Gaps = 71/552 (12%)
Query: 38 LSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDAL----RTFEFSG 93
LS LN + L Q+H L +K G+ + L+ A S+ DAL R
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAI--SISDALPYARRLLLCFP 66
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG-VLPSEFTLVGVINACSDLCAIVEGR 152
++ ++ +V GY++S + ++ +F M G V P F+ VI A + ++ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT------ 206
QMH +LK G L+V ++L+ MY CG + AR+ F+ + QP++V W ++IT
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 207 -------------------------GYVQNGDFEGALNLYGKM----------------- 224
GY++ G+ E A ++ +M
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 225 ------------QIER--IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
+++R + PNE+++ VL ACS + + GK +H + K G++ V V
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMP-TRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
+AL MY++CG++ L+F M R ++SW +MI+GL+ +G G +A+ LF++M G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
PD ++F++LL ACSH GL++ G DYF M + I P +EHY CMVD+ R+GKL +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 390 KEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTAL 449
+FI + +WR LLG C +H N ++ ++L EL S VLLS+ Y
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 450 GQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLM 509
G+W+DV +R+ M + + K S +E+ ++ F G+ E +L+ + +
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 510 KDE-GYQPHLDS 520
KDE GY P + S
Sbjct: 547 KDEAGYTPEVAS 558
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 249/487 (51%), Gaps = 43/487 (8%)
Query: 37 ILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK- 95
+L ++ F GR +H+ +KN + V +LV +YAK G L A + FE S ++
Sbjct: 132 VLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRI 191
Query: 96 ---NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR 152
+ + W+ ++ GY ++ D A LF SM P N+ S
Sbjct: 192 KKESILIWNVLINGYCRAKDMHMATTLFRSM------PER-------NSGS--------- 229
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG 212
S+L+ Y G L A++ FE + + +VV WT++I G+ Q G
Sbjct: 230 -----------------WSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTG 272
Query: 213 DFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGS 272
D+E A++ Y +M + + PNE T+A+VL ACS AL G ++H I+ G L+ +G+
Sbjct: 273 DYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGT 332
Query: 273 ALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
AL MYAKCG LD +F M +D++SW AMI G + +G ++A++ F +M+ G KP
Sbjct: 333 ALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKP 392
Query: 333 DTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
D V F+ +L+AC + VD G ++F M ++ I PT++HY +VD+L RAGKLNEA E
Sbjct: 393 DEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Query: 393 IESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQW 452
+E+ ++ L W L C+ H+ Y + L+EL +Y+ L + + G
Sbjct: 453 VENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNI 512
Query: 453 EDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDE 512
+DVE R ++ R + G S+IEL ++ F GD H EI +L + L +
Sbjct: 513 QDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQK 572
Query: 513 GYQPHLD 519
GY P D
Sbjct: 573 GYNPGAD 579
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 159/327 (48%), Gaps = 10/327 (3%)
Query: 5 YASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQV-HSLAMKNGLL 63
YA G K A ++FE+ + + E+ + +++ R + + + S+ +N
Sbjct: 171 YAKTGQLKHAFQVFEE-SPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS-- 227
Query: 64 SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM 123
+ L+ Y G L+ A + FE KN ++W+ ++ G++Q+GD E A+ + M
Sbjct: 228 ---GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 124 HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
G+ P+E+T+ V++ACS A+ G ++HGY L G L + ++LVDMYAKCG L
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 184 ADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKAC 243
A F + D++ WT++I G+ +G F A+ + +M P+E+ +VL AC
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 244 SSLAALDQGKQMHAGI-IKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVIS 301
+ + +D G + + Y + + + + G L++ + + MP D+ +
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLE 328
W A+ + G + E + LLE
Sbjct: 465 WAALYRACKAH-KGYRRAESVSQNLLE 490
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 177/412 (42%), Gaps = 50/412 (12%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
R VH+ ++ G+LS VA LV+ + S D +L F S +N +A++ G ++
Sbjct: 46 RHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTEN 104
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
E ++R F M GV P T V+ + S L GR +H +LK +V
Sbjct: 105 ARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVR 164
Query: 171 SSLVDMYAKCGSLADARRGFE----YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
SLVDMYAK G L A + FE +++ +++W +I GY + D A L+ M
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP- 223
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
ER N + ++++K Y G L+
Sbjct: 224 ER---NSGSWSTLIKG-----------------------------------YVDSGELNR 245
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
+F MP ++V+SW +I+G SQ G A+ + +ML +G KP+ T +LSACS
Sbjct: 246 AKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCL-W 405
G + G + D I +VD+ ++ G+L+ A + ++H L W
Sbjct: 306 SGALGSGIRIHGYILDN-GIKLDRAIGTALVDMYAKCGELDCAATVF--SNMNHKDILSW 362
Query: 406 RILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVEL 457
++ G H + ++M G E V+ ++ TA +V+L
Sbjct: 363 TAMIQGWAVHGRFHQAIQCFRQMMYSG--EKPDEVVFLAVLTACLNSSEVDL 412
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 272/524 (51%), Gaps = 43/524 (8%)
Query: 36 SILSDLNRTEFLDTGRQVHSLAMKNGLLSIVS-VANALVTLYAKCGSLDDALRTFEFSGN 94
+ L + + FL +Q+H + +G LS+ + + N+LV Y + G+ A + F +
Sbjct: 135 TFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH 194
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
+ +++ M+ GYA+ G S +AL+L+ M G+ P E+T++ ++ C L I G+ +
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 155 HGYSLKLG--FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNG 212
HG+ + G + L + ++L+DMY KC A+R F+ +++ D+ W +++ G+V+ G
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 213 DFEGALNLYGKMQ---------------------------------IERIIPNELTMASV 239
D E A ++ +M +E++ P+ +TM S+
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ ++ L G+ +H +I+ + + SAL MY KCG ++ +++F +DV
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
W +MI+GL+ +G+G +AL+LF +M EG P+ VT + +L+ACSH GLV+ G F
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESA-EVDHGLCLWRILLGGCRNHRNY 418
M D+F P EHY +VD+L RAG++ EAK+ ++ + +W +L CR +
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+ A +L++L + YVLLS+IY +G+W + R M+ RGV K G S +
Sbjct: 555 ETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
Query: 479 KSLVHVFVVGDSM-HPQIDEIRSELRLLTKLMKDEGYQPHLDSL 521
+H FV + HP+ EI+ L+ L MK P LD L
Sbjct: 615 VEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK-----PKLDCL 653
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 39/346 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GYA G + EA++L+ +M + E +E+ + S+L + G+ VH +
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIE-PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 61 GLL--SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
G + S + ++NAL+ +Y KC A R F+ K+ +W+ MV G+ + GD E A
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 119 LFHSMH---------------------------------CSGVLPSEFTLVGVINACSDL 145
+F M V P T+V +I+ ++
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSII 205
+ GR +HG ++L ++ S+L+DMY KCG + A F+ + DV LWTS+I
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 206 TGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII-KYGF 264
TG +G+ + AL L+G+MQ E + PN +T+ +VL ACS +++G + + K+GF
Sbjct: 442 TGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGF 501
Query: 265 NLEVPVGSALSAMYAKCGSLDDGY-LIFWRMPTRDVIS-WNAMISG 308
+ E +L + + G +++ ++ +MP R S W +++S
Sbjct: 502 DPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 171/369 (46%), Gaps = 55/369 (14%)
Query: 91 FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVE 150
F+ N N ++ M++ A S + L+ SM V P T + ++ A S L E
Sbjct: 94 FTPNPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLS---E 148
Query: 151 GRQMHGYSLKLG-FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
+Q+H + + G L Y+ +SLV Y + G+ A + F + PDV + +I GY
Sbjct: 149 VKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA 208
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYG--FNLE 267
+ G AL LY KM + I P+E T+ S+L C L+ + GK +H I + G ++
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 268 VPVGSALSAMYAKC-------------------------------GSLDDGYLIFWRMPT 296
+ + +AL MY KC G ++ +F +MP
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Query: 297 RDVISWNAMISGLSQNGHGNKAL-ELFDKM-LLEGTKPDTVTFVNLLSACSHMGLVDRG- 353
RD++SWN+++ G S+ G + + ELF +M ++E KPD VT V+L+S ++ G + G
Sbjct: 329 RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR 388
Query: 354 WDY-----FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRIL 408
W + ++ D F + ++ Y C I+ RA + F + E D + LW +
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMY-CKCGIIERAFMV-----FKTATEKD--VALWTSM 440
Query: 409 LGGCRNHRN 417
+ G H N
Sbjct: 441 ITGLAFHGN 449
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 1 MLSGYASLGLAKEAI-ELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
+L GY+ G + + ELF +M E+ + + S++S L GR VH L ++
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
L +++AL+ +Y KCG ++ A F+ + K+ W++M+TG A G+ ++AL+L
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY-SLKLGFGLQLYVLSSLVDMYA 178
F M GV P+ TL+ V+ ACS + EG + + K GF + SLVD+
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLC 516
Query: 179 KCGSLADARRGFEYVQQ-----PDVVLWTSIITGYVQNGDFEGA 217
+ G + +A+ + VQ+ P +W SI++ D E A
Sbjct: 517 RAGRVEEAK---DIVQKKMPMRPSQSMWGSILSACRGGEDIETA 557
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 243/433 (56%), Gaps = 8/433 (1%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
+ G Q+H L +K GL S + +LV Y KCG + +A R FE +++ + W+A+V+
Sbjct: 158 MKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSS 217
Query: 107 YAQSGDSEKALRLFHSMHC--SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFG 164
Y +G ++A L M + FT +++AC I +G+Q+H K+ +
Sbjct: 218 YVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQ 273
Query: 165 LQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
+ V ++L++MYAK L+DAR FE + +VV W ++I G+ QNG+ A+ L+G+M
Sbjct: 274 FDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM 333
Query: 225 QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+E + P+ELT ASVL +C+ +A+ + KQ+ A + K G + V ++L + Y++ G+L
Sbjct: 334 LLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNL 393
Query: 285 DDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
+ L F + D++SW ++I L+ +G ++L++F+ M L+ +PD +TF+ +LSAC
Sbjct: 394 SEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSAC 452
Query: 345 SHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCL 404
SH GLV G FK M++ + I EHY C++D+L RAG ++EA + + S +
Sbjct: 453 SHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHA 512
Query: 405 WRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKA 464
GGC H + + +KL+E+ + Y +LS+ Y + G W L+R+ +
Sbjct: 513 LAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERR 572
Query: 465 RGV-AKEPGCSWI 476
K PGCSW+
Sbjct: 573 NCYNPKTPGCSWL 585
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 168/308 (54%), Gaps = 13/308 (4%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ- 109
+Q H +K G+ + + + N L+ Y K DDA + F+ +N +TW+ ++ G Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTL-----VGVINACSDLCAIVEGRQMHGYSLKLGFG 164
GD+ L + S +L ++ +L +G+I C+D + G Q+H +K G
Sbjct: 116 DGDTNHRAHLGFC-YLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 165 LQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
+ +SLV Y KCG + +ARR FE V D+VLW ++++ YV NG + A L M
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 225 --QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCG 282
R + T +S+L AC ++QGKQ+HA + K + ++PV +AL MYAK
Sbjct: 235 GSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN 290
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
L D F M R+V+SWNAMI G +QNG G +A+ LF +MLLE +PD +TF ++LS
Sbjct: 291 HLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLS 350
Query: 343 ACSHMGLV 350
+C+ +
Sbjct: 351 SCAKFSAI 358
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 159/332 (47%), Gaps = 28/332 (8%)
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ- 210
+Q HG+ +K G L++ + L+ Y K DA + F+ + ++V W +I G +Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASV-----LKACSSLAALDQGKQMHAGIIKYGFN 265
+GD +L G + RI+ ++++ V ++ C+ + G Q+H ++K G
Sbjct: 116 DGDTNHRAHL-GFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELF--- 322
++L Y KCG + + +F + RD++ WNA++S NG ++A L
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 323 --DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM---SDEFDITPTVEHYACMV 377
DK G D TF +LLSAC +++G ++ S +FDI P ++
Sbjct: 235 GSDKNRFRG---DYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDI-PVA---TALL 283
Query: 378 DILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESS 437
++ +++ L++A+E ES V + + +++G +N + G+ L+E P+
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 438 AYV-LLSSIYTALGQWEDVELVRRMMKARGVA 468
+ +LSS WE ++ V+ M+ +G A
Sbjct: 344 TFASVLSSCAKFSAIWE-IKQVQAMVTKKGSA 374
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ G+A G +EA+ LF QM E + +E S+LS + + +QV ++ K
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQ-PDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +SVAN+L++ Y++ G+L +AL F + ++W++++ A G +E++L++F
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEG 151
SM + P + T + V++ACS + EG
Sbjct: 432 ESM-LQKLQPDKITFLEVLSACSHGGLVQEG 461
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 252/477 (52%), Gaps = 8/477 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ Y+ GL +EAI +F+ M + E S ++ +N + +H L +K
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVE-------ISPVTIINLLSAHVSHEPLHCLVVKC 275
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+++ +SV +LV Y++CG L A R + + + + +++V+ YA+ GD + A+ F
Sbjct: 276 GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 335
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ LVG+++ C I G +HGY++K G + V++ L+ MY+K
Sbjct: 336 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 395
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER-IIPNELTMASV 239
+ FE +Q+ ++ W S+I+G VQ+G A ++ +M + ++P+ +T+AS+
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L CS L L+ GK++H ++ F E V +AL MYAKCG+ +F +
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT 515
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+WN+MISG S +G ++AL + +M +G KPD +TF+ +LSAC+H G VD G F+
Sbjct: 516 ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRA 575
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M EF I+PT++HYA MV +L RA EA I ++ +W LL C HR +
Sbjct: 576 MIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELE 635
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
+G Y K+ L YVL+S++Y W+DV VR MMK G G S I
Sbjct: 636 VGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 208/401 (51%), Gaps = 15/401 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ G +A +LF M ++ + L ++L + F+ GR VH +A K+
Sbjct: 122 LICGYSRNGYECDAWKLFIVML-QQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS 180
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL V NAL++ Y+KC L A F +K++++W+ M+ Y+QSG E+A+ +F
Sbjct: 181 GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+M V E + V +IN L A V +H +K G + V++SLV Y++C
Sbjct: 241 KNMFEKNV---EISPVTIINL---LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G L A R + +Q +V TSI++ Y + GD + A+ + K + + + + + +L
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGIL 354
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
C + +D G +H IK G + V + L MY+K ++ +F ++ +I
Sbjct: 355 HGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLI 414
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLE-GTKPDTVTFVNLLSACSHMGLVDRGWD-YFK 358
SWN++ISG Q+G + A E+F +M+L G PD +T +LL+ CS + ++ G + +
Sbjct: 415 SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGY 474
Query: 359 MMSDEFDITPTVEHYAC--MVDILSRAGKLNEAKEFIESAE 397
+ + F+ E++ C ++D+ ++ G +A+ +S +
Sbjct: 475 TLRNNFE----NENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 145/302 (48%), Gaps = 6/302 (1%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
QV + K+GL V V +L+ LY K G + A F+ ++++ W+A++ GY+++G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
A +LF M G PS TLV ++ C + +GR +HG + K G L V +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 172 SLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
+L+ Y+KC L A F ++ V W ++I Y Q+G E A+ ++ M + +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
+ +T+ ++L A S + +H ++K G ++ V ++L Y++CG L ++
Sbjct: 251 SPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 292 WRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
++ +++S ++ G + A+ F K K D V V +L C +D
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 352 RG 353
G
Sbjct: 365 IG 366
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 19/294 (6%)
Query: 113 SEKALRLFHSMHCSGVLPSEFTLVGVINACSDL--CAIVEGRQMHGYSLKLGFGLQLYVL 170
S + +F + S + P+ FT+ + A + ++ Q+ + K G +YV
Sbjct: 29 SSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVK 88
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
+SL+++Y K G + A+ F+ + + D V+W ++I GY +NG A L+ M +
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
P+ T+ ++L C + QG+ +H K G L+ V +AL + Y+KC L ++
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA-CSHMGL 349
F M + +SWN MI SQ+G +A+ +F M + + VT +NLLSA SH L
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
Query: 350 ----VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVD 399
V G M++D +T V Y SR G L A+ SA+ D
Sbjct: 269 HCLVVKCG-----MVNDISVVTSLVCAY-------SRCGCLVSAERLYASAKQD 310
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 269/476 (56%), Gaps = 19/476 (3%)
Query: 9 GLAKEAIELFEQM-RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVS 67
G + + LF Q+ R + + F T +L + + +TGRQVH+L +K G +
Sbjct: 63 GNPNDTLALFLQIHRASPDLSSHTF--TPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 68 VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
AL+ +Y+K G L D++R FE K+ ++W+A+++G+ ++G ++AL +F +M+
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL-SSLVDMYAKCGSLADA 186
V SEFTL V+ C+ L + +G+Q+H ++ + G L VL ++++ Y+ G + +A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVH--AMVVVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 187 RRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS 245
+ + + D V+ S+I+G ++N +++ A L + + PN ++S L CS
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSD 293
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAM 305
+ L GKQ+H ++ GF + + + L MY KCG + IF +P++ V+SW +M
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTK--PDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
I + NG G KALE+F +M EG+ P++VTF+ ++SAC+H GLV G + F MM ++
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Query: 364 FDITPTVEHYACMVDILSRAGKLNEAKEFIES-AEVDH---GLCLWRILLGGCRNHRNYD 419
+ + P EHY C +DILS+AG+ E +E E D+ +W +L C + +
Sbjct: 414 YRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLT 473
Query: 420 IGAYAGEKLMELGSPE-SSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
G Y +LME PE +S YVL+S+ Y A+G+W+ VE +R +K +G+ K G S
Sbjct: 474 RGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 134/238 (56%), Gaps = 7/238 (2%)
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
+SG+ L LF +H + S T V+ ACS L GRQ+H +K G
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
++L+DMY+K G L D+ R FE V++ D+V W ++++G+++NG + AL ++ M ER
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
+ +E T++SV+K C+SL L QGKQ+HA ++ G +L V +G+A+ + Y+ G +++
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAM 239
Query: 289 LIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
++ + D + N++ISG +N + +A +L+ +P+ + L+ CS
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCS 292
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 177/354 (50%), Gaps = 23/354 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+LSG+ G KEA+ +F M E E +EF L+S++ + L G+QVH++ +
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVE-ISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G +V + A+++ Y+ G +++A++ + + + + + +++++G ++ + ++A L
Sbjct: 215 G-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
P+ L + CSD + G+Q+H +L+ GF + + L+DMY K
Sbjct: 274 MSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE--RIIPNELTMA 237
CG + AR F + VV WTS+I Y NGD AL ++ +M E ++PN +T
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGS----ALSAMYAKCGSLDDGYLIFWR 293
V+ AC+ + +GK+ G++K + L VP G+ + +K G ++ + + R
Sbjct: 389 VVISACAHAGLVKEGKECF-GMMKEKYRL-VP-GTEHYVCFIDILSKAGETEEIWRLVER 445
Query: 294 MPTRDVIS-----WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
M D S W A++S S N + E + L+E T P+ + L+S
Sbjct: 446 MMENDNQSIPCAIWVAVLSACSLNMDLTRG-EYVARRLMEETGPENASIYVLVS 498
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 223/400 (55%), Gaps = 2/400 (0%)
Query: 78 KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVG 137
+ G ++ R F + W+AM++GY+ E+A+ F M + P + TL
Sbjct: 362 RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE-YVQQP 196
++++C+ L + G+Q+HG ++ +++S L+ +Y++C + + F+ + +
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQM 255
D+ W S+I+G+ N AL L+ +M Q + PNE + A+VL +CS L +L G+Q
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHG 315
H ++K G+ + V +AL+ MY KCG +D F + ++ + WN MI G NG G
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRG 601
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC 375
++A+ L+ KM+ G KPD +TFV++L+ACSH GLV+ G + M I P ++HY C
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC 661
Query: 376 MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPE 435
+VD L RAG+L +A++ E+ LW ILL CR H + + EKLM L
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS 721
Query: 436 SSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
S+AYVLLS+ Y++L QW+D ++ +M V K PG SW
Sbjct: 722 SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 176/330 (53%), Gaps = 15/330 (4%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
NA +T K G L +A F+ ++ ++W+ M++ + G EKAL ++ M C G L
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD-ARR 188
PS FTL V++ACS + V G + HG ++K G ++V ++L+ MYAKCG + D R
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-----QIERI-IPNELTMASVLKA 242
FE + QP+ V +T++I G + A+ ++ M Q++ + + N L++++ +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 243 CSSLAAL---DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
C SL+ + + GKQ+H ++ GF ++ + ++L +YAK ++ LIF MP +V
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+SWN MI G Q +K++E +M G +P+ VT +++L AC G V+ G F
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEA 389
+ P+V + M+ S EA
Sbjct: 376 IPQ-----PSVSAWNAMLSGYSNYEHYEEA 400
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 221/483 (45%), Gaps = 51/483 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDT---------GR 51
++ G A EA+++F M CE+ + L++ILS E D+ G+
Sbjct: 211 VIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGK 269
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
Q+H LA++ G + + N+L+ +YAK ++ A F N ++W+ M+ G+ Q
Sbjct: 270 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 329
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
S+K++ M SG P+E T + V+ AC
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------------------- 360
Query: 172 SLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
+ G + RR F + QP V W ++++GY +E A++ + +MQ + + P
Sbjct: 361 ------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKP 414
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
++ T++ +L +C+ L L+ GKQ+H +I+ + + S L A+Y++C ++ IF
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 292 WRMPTR-DVISWNAMISGLSQNGHGNKALELFDKMLLEGTK-PDTVTFVNLLSACSHMGL 349
D+ WN+MISG N KAL LF +M P+ +F +LS+CS +
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
+ G + ++ ++ + A + D+ + G+++ A++F + A + +W ++
Sbjct: 535 LLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFFD-AVLRKNTVIWNEMI 592
Query: 410 GGCRNHRNYDIGAYAGEKLMELG-SPESSAYVLLSSIYTALGQWED-VELVRRMMKARGV 467
G ++ D K++ G P+ +V + + + G E +E++ M + G+
Sbjct: 593 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 468 AKE 470
E
Sbjct: 653 EPE 655
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 46/363 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S G ++A+ ++++M C+ + F L S+LS ++ G + H +A+K
Sbjct: 109 MISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKT 167
Query: 61 GLLSIVSVANALVTLYAKCGSL-DDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL + V NAL+++YAKCG + D +R FE N ++++A++ G A+ +A+++
Sbjct: 168 GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQM 227
Query: 120 FHSMHCSGVLPSEFTLVGVIN------ACSDLCAIVE---GRQMHGYSLKLGFGLQLYVL 170
F M GV L +++ C L I G+Q+H +L+LGFG L++
Sbjct: 228 FRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLN 287
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
+SL+++YAK + A F + + +VV W +I G+ Q + ++ +M+
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
PNE+T SVL AC + G ++ G I
Sbjct: 348 PNEVTCISVLGAC-----------------------------------FRSGDVETGRRI 372
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F +P V +WNAM+SG S H +A+ F +M + KPD T +LS+C+ + +
Sbjct: 373 FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
Query: 351 DRG 353
+ G
Sbjct: 433 EGG 435
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 32/226 (14%)
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS-------------------------- 182
+ G+ +HG+ +++G Y+ + L+D+Y +CG
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 183 -----LADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
L +A F+ + + DVV W ++I+ V+ G E AL +Y +M + +P+ T+A
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL-DDGYLIFWRMPT 296
SVL ACS + G + H +K G + + VG+AL +MYAKCG + D G +F +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
+ +S+ A+I GL++ +A+++F M +G + D+V N+LS
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG+ L +A+ LF +M NE ++LS +R L GRQ H L +K+
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS 548
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +S V AL +Y KCG +D A + F+ KN++ W+ M+ GY +G ++A+ L+
Sbjct: 549 GYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL-GFGLQLYVLSSLVDMYAK 179
M SG P T V V+ ACS + G ++ ++ G +L +VD +
Sbjct: 609 RKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGR 668
Query: 180 CGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
G L DA + E + VLW +++ +GD A + K+
Sbjct: 669 AGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+AS+L+ GK +H I++ G + + + L +Y +CG D +F M
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
RDV SWNA ++ + G +A E+FD M + D V++ N++S G ++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGM----PERDVVSWNNMISVLVRKGFEEKALV 124
Query: 356 YFKMM 360
+K M
Sbjct: 125 VYKRM 129
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 249/469 (53%), Gaps = 48/469 (10%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G+++H+ +K G ++++ L+ L+ KCG L A + F+ ++ M++GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSD----------LCAIVEGRQMHGYSL 159
G ++ L L M SG +TL V+ A + LC +V H +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLV-----HARII 167
Query: 160 KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALN 219
K L ++++LVD Y K G L AR FE ++ +VV TS+I+GY+ G E A
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 220 LYGKMQIERII--------------------------------PNELTMASVLKACSSLA 247
++ +++ I+ PN T ASV+ ACS L
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
+ + G+Q+HA I+K G + +GS+L MYAKCG ++D +F +M ++V SW +MI
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
G +NG+ +ALELF +M +P+ VTF+ LSACSH GLVD+G++ F+ M ++ +
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
P +EHYAC+VD++ RAG LN+A EF + +W LL C H N ++ + A +
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASE 467
Query: 428 LMELGSPESS-AYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
L +L + + AY+ LS++Y + +W++V +R +MK R ++K G SW
Sbjct: 468 LFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 176/358 (49%), Gaps = 42/358 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLN---RTEFLDTG--RQVHS 55
M+SGY GL KE + L ++M E+ + + L+ +L N T L R VH+
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADG-YTLSMVLKASNSRGSTMILPRSLCRLVHA 164
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNS------------------ 97
+K + + ALV Y K G L+ A FE ++N
Sbjct: 165 RIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVED 224
Query: 98 -------------ITWSAMVTGYAQSGDSEK-ALRLFHSMHCSGVLPSEFTLVGVINACS 143
+ ++AMV G+++SG++ K ++ ++ SM +G P+ T VI ACS
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACS 284
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTS 203
L + G+Q+H +K G + + SSL+DMYAKCG + DARR F+ +Q+ +V WTS
Sbjct: 285 VLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTS 344
Query: 204 IITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK-Y 262
+I GY +NG+ E AL L+ +M+ RI PN +T L ACS +D+G ++ + + Y
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 263 GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKAL 319
++ + + + + G L+ + MP R D W A++S S N HGN L
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS--SCNLHGNVEL 460
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 129/244 (52%), Gaps = 28/244 (11%)
Query: 1 MLSGYASLG-LAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
M+ G++ G AK +++++ M+ N S++ + + G+QVH+ MK
Sbjct: 243 MVEGFSRSGETAKRSVDMYISMQ-RAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMK 301
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+G+ + + + ++L+ +YAKCG ++DA R F+ KN +W++M+ GY ++G+ E+AL L
Sbjct: 302 SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALEL 361
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM-----HGYSLKLGFGLQLYVLSSLV 174
F M + P+ T +G ++ACS + +G ++ YS+K ++ + +V
Sbjct: 362 FTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK----PKMEHYACIV 417
Query: 175 DMYAKCGSLADARRGFEYV----QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
D+ + G D + FE+ ++PD +W ++++ + NL+G +++ I
Sbjct: 418 DLMGRAG---DLNKAFEFARAMPERPDSDIWAALLS----------SCNLHGNVELASIA 464
Query: 231 PNEL 234
+EL
Sbjct: 465 ASEL 468
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+A L+ + A GK++HA IIK GF ++ + L ++ KCG L +F +P
Sbjct: 37 IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP 96
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG---LVDR 352
+ ++N MISG ++G + L L +M G K D T +L A + G ++ R
Sbjct: 97 KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 353 G---WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
+ +++ + ++ + +VD ++GKL A+ E+ + ++ +C ++
Sbjct: 157 SLCRLVHARIIKCDVELDDVL--ITALVDTYVKSGKLESARTVFETMKDENVVCCTSMIS 214
Query: 410 G 410
G
Sbjct: 215 G 215
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 219/401 (54%), Gaps = 6/401 (1%)
Query: 92 SGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEG 151
S + TW+ + GY+ S +++ ++ M G+ P++ T ++ AC+ + G
Sbjct: 73 SSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAG 132
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQN 211
RQ+ LK GF +YV ++L+ +Y C +DAR+ F+ + + +VV W SI+T V+N
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
G + +M +R P+E TM +L AC L GK +H+ ++ L +G
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLG 250
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT- 330
+AL MYAK G L+ L+F RM ++V +W+AMI GL+Q G +AL+LF KM+ E +
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK 390
+P+ VTF+ +L ACSH GLVD G+ YF M I P + HY MVDIL RAG+LNEA
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 391 EFIESAEVDHGLCLWRILLGGCRNHRNYD---IGAYAGEKLMELGSPESSAYVLLSSIYT 447
+FI+ + +WR LL C H + D IG ++L+EL S V++++ +
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFA 430
Query: 448 ALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVG 488
W + VRR+MK + K G S +EL H F G
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 186/440 (42%), Gaps = 68/440 (15%)
Query: 1 MLS-GYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
MLS GY+S E+I ++ +M+ N+ +L L GRQ+ +K
Sbjct: 83 MLSRGYSSSDSPVESIWVYSEMK-RRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLK 141
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+G V V N L+ LY C DA + F+ +N ++W++++T ++G
Sbjct: 142 HGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFEC 201
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M P E T+V +++AC ++ G+ +H + L + ++LVDMYAK
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAK 259
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII-PNELTMAS 238
G L AR FE + +V W+++I G Q G E AL L+ KM E + PN +T
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL ACS H G++ DDGY F M
Sbjct: 320 VLCACS-----------HTGLV------------------------DDGYKYFHEMEKIH 344
Query: 299 -----VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS-HMGLVDR 352
+I + AM+ L + G N+A + KM E PD V + LLSACS H D
Sbjct: 345 KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE---PDAVVWRTLLSACSIHHDEDDE 401
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC 412
G K+ ++ P +V A + EA+ + E+AEV
Sbjct: 402 GIGE-KVKKRLIELEPKRSGNLVIV-----ANRFAEARMWAEAAEVR------------- 442
Query: 413 RNHRNYDIGAYAGEKLMELG 432
R + + AGE +ELG
Sbjct: 443 RVMKETKMKKIAGESCLELG 462
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 8/247 (3%)
Query: 168 YVLSSLVDM--YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
+++S LV + + LA AR + W + GY + ++ +Y +M+
Sbjct: 46 FIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMK 105
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
I PN+LT +LKAC+S L G+Q+ ++K+GF+ +V VG+ L +Y C
Sbjct: 106 RRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTS 165
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS 345
D +F M R+V+SWN++++ L +NG N E F +M+ + PD T V LLSAC
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 346 HMGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCL 404
G + G + ++M E ++ + +VD+ +++G L A+ E VD +
Sbjct: 226 --GNLSLGKLVHSQVMVRELELNCRLG--TALVDMYAKSGGLEYARLVFERM-VDKNVWT 280
Query: 405 WRILLGG 411
W ++ G
Sbjct: 281 WSAMIVG 287
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 247/480 (51%), Gaps = 15/480 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY++ L E + + +M +E+ ++ + + G VH L ++
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRI 139
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V V + V Y KC L A + F +N+++W+A+V Y +SG+ E+A +F
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M L S LV + DL V +++ K + +S++D YAK
Sbjct: 200 DLMPERN-LGSWNALVDGLVKSGDL---VNAKKLFDEMPKR----DIISYTSMIDGYAKG 251
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G + AR FE + DV W+++I GY QNG A ++ +M + + P+E M ++
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 241 KACSSLAALDQGKQ----MHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
ACS + + ++ +H + K+ + VP AL M AKCG +D +F MP
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDRAAKLFEEMPQ 368
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
RD++S+ +M+ G++ +G G++A+ LF+KM+ EG PD V F +L C LV+ G Y
Sbjct: 369 RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRY 428
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHR 416
F++M ++ I + +HY+C+V++LSR GKL EA E I+S + W LLGGC H
Sbjct: 429 FELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
Query: 417 NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
N +I L EL + +YVLLS+IY AL +W DV +R M G+ K G SWI
Sbjct: 489 NTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 16/280 (5%)
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII-PNELTMASVLKACSSLAA 248
FE V P LW +I GY F +++ +M + P+E T V+K CS+
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISG 308
+ G +H +++ GF+ +V VG++ Y KC L +F MP R+ +SW A++
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 309 LSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM-GLVDRGWDYFKMMSDEFDIT 367
++G +A +FD M P+ NL S + + GLV G D FD
Sbjct: 186 YVKSGELEEAKSMFDLM------PER----NLGSWNALVDGLVKSG-DLVN-AKKLFDEM 233
Query: 368 PT--VEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAG 425
P + Y M+D ++ G + A++ E A ++LG +N + +
Sbjct: 234 PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 426 EKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKAR 465
E + P+ V L S + +G +E E V + R
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR 333
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 289/577 (50%), Gaps = 70/577 (12%)
Query: 1 MLSGYASL-GLAKEAIELFEQMRCEEEEGE--NEFVLTSILSDLNRTEFLDTGRQVHSLA 57
+LSG+A G EAIE+F +M +E++ ++F +T+++ + + G Q+H +
Sbjct: 92 LLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVL 151
Query: 58 MKNGLLSIVSVANALVTLYAKCGS---------------------------------LDD 84
+K G ++L+ +Y+KCG +D
Sbjct: 152 VKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDK 211
Query: 85 ALRTFEFSGNKN-SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS 143
AL F + N +I+W+ ++ GYAQ+G E+AL++ SM +G+ E + V+N S
Sbjct: 212 ALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLS 271
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS--------------------- 182
L ++ G+++H LK G +V S +VD+Y KCG+
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASS 331
Query: 183 ----------LADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL-YGKMQIERIIP 231
+ +A+R F+ + + ++V+WT++ GY+ + L L + E P
Sbjct: 332 MIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTP 391
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
+ L M SVL ACS A ++ GK++H ++ G ++ + +A MY+KCG+++ IF
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF 451
Query: 292 WRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
RD + +NAMI+G + +GH K+ + F+ M G KPD +TF+ LLSAC H GLV
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVL 511
Query: 352 RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESA-EVDHGLCLWRILLG 410
G YFK M + ++I+P HY CM+D+ +A +L++A E +E +V+ + L
Sbjct: 512 EGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLN 571
Query: 411 GCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
C ++N ++ EKL+ + S Y+ +++ Y + G+W++++ +R M+ + +
Sbjct: 572 ACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIF 631
Query: 471 PGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTK 507
GCSW + H+F D H + + I + L +TK
Sbjct: 632 SGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTK 668
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/602 (21%), Positives = 234/602 (38%), Gaps = 108/602 (17%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L G H ++K+G +N LV LY+K G L +A F+ +N +W+A++
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 107 YAQSGDSEKALRLFHSMHC-----------SGVLPSE----------------------- 132
Y + + ++A LF S +C SG ++
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 133 --FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF 190
FT+ ++ + L + G Q+HG +K G + +SSL+ MY+KCG + F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 191 -----EYV--------------------------QQP---DVVLWTSIITGYVQNGDFEG 216
E+V + P D + W ++I GY QNG E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 217 ALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA 276
AL + M+ + +E + +VL SSL +L GK++HA ++K G V S +
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 277 MYAKCGSLD-------------------------------DGYLIFWRMPTRDVISWNAM 305
+Y KCG++ + +F + ++++ W AM
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM 363
Query: 306 ISGLSQNGHGNKALELFDKMLL-EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEF 364
G + LEL + E PD++ V++L ACS ++ G + S
Sbjct: 364 FLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKE-IHGHSLRT 422
Query: 365 DITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYA 424
I + VD+ S+ G + A+ +S+ + ++ ++ GC +H +
Sbjct: 423 GILMDKKLVTAFVDMYSKCGNVEYAERIFDSS-FERDTVMYNAMIAGCAHHGHEAKSFQH 481
Query: 425 GEKLMELG-SPESSAYVLLSSIYTALG-QWEDVELVRRMMKARGVAKEPG--CSWIELKS 480
E + E G P+ ++ L S G E + + M++A ++ E G I+L
Sbjct: 482 FEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYG 541
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSHEI 540
+ + ID++ + +L + + + + + E E + GS I
Sbjct: 542 KAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYI 601
Query: 541 QL 542
Q+
Sbjct: 602 QI 603
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 254/477 (53%), Gaps = 4/477 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++ A G +E+ ++F +M+ + + V++ ++++L + + G+ H +++
Sbjct: 302 IIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+V N+L+++Y K L A + F S N W+ M+ GY + K + L
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL 420
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F + G+ + VI++CS + A++ G+ +H Y +K L + V++SL+D+Y K
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
G L A R F +V+ W ++I YV E A+ L+ +M E P+ +T+ ++
Sbjct: 481 MGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTL 539
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L AC + +L++G+ +H I + + + + +AL MYAKCG L+ +F +D
Sbjct: 540 LMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDA 599
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+ WN MISG +G A+ LFD+M KP TF+ LLSAC+H GLV++G F
Sbjct: 600 VCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLK 659
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
M ++D+ P ++HY+C+VD+LSR+G L EA+ + S +W LL C H ++
Sbjct: 660 M-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Query: 420 IGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
+G E+ + Y++L+++Y+A G+WE+ E R MM+ GV K G S +
Sbjct: 719 MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 199/390 (51%), Gaps = 10/390 (2%)
Query: 27 EGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSI-VSVANALVTLYAKCGSLDDA 85
+ + F ++S + G VH L +K+G +V + V Y+KCG L DA
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDA 180
Query: 86 LRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV---LPSEFTLVGVINAC 142
F+ +++ + W+A+++G+ Q+G+SE L MH +G P+ TL AC
Sbjct: 181 CLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQAC 240
Query: 143 SDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWT 202
S+L A+ EGR +HG+++K G +V SS+ Y+K G+ ++A F + D+ WT
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWT 300
Query: 203 SIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY 262
SII ++GD E + +++ +MQ + + P+ + ++ ++ + + QGK H +I++
Sbjct: 301 SIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Query: 263 GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKALEL 321
F+L+ V ++L +MY K L +F R+ + +WN M+ G + K +EL
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL 420
Query: 322 FDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDEFDITPTVEHYACMVDIL 380
F K+ G + D+ + +++S+CSH+G V G + ++ D+T +V + ++D+
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN--SLIDLY 478
Query: 381 SRAGKLNEAKEFIESAEVDHGLCLWRILLG 410
+ G L A E D + W ++
Sbjct: 479 GKMGDLTVAWRMF--CEADTNVITWNAMIA 506
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 185/351 (52%), Gaps = 13/351 (3%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
L++ R+ ++L + GL + VA+ L++ YA G + + R F ++ W++++
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 107 YAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL-GFGL 165
+ +GD ++L F SM SG P FT V++AC++L G +HG LK GF
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
V +S V Y+KCG L DA F+ + DVV WT+II+G+VQNG+ EG L KM
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMH 219
Query: 226 -----IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK 280
+++ PN T+ +ACS+L AL +G+ +H +K G V S++ + Y+K
Sbjct: 220 SAGSDVDK--PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 281 CGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
G+ + YL F + D+ SW ++I+ L+++G ++ ++F +M +G PD V L
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 341 LSACSHMGLVDRGWDYFKMMSDE-FDITPTVEH----YACMVDILSRAGKL 386
++ M LV +G + + F + TV + C ++LS A KL
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 226/426 (53%), Gaps = 44/426 (10%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTG 106
+ GRQ+H L +K+GL++ V V N LV +Y + G + A + + +++++W+++++
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 107 YAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
Y + G ++A LF M V F + G
Sbjct: 216 YLEKGLVDEARALFDEMEERNVESWNFMISG----------------------------- 246
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-- 224
YA G + +A+ F+ + DVV W +++T Y G + L ++ KM
Sbjct: 247 ----------YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 225 -QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGS 283
E+ P+ T+ SVL AC+SL +L QG+ +H I K+G +E + +AL MY+KCG
Sbjct: 297 DSTEK--PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 284 LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+D +F RDV +WN++IS LS +G G ALE+F +M+ EG KP+ +TF+ +LSA
Sbjct: 355 IDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Query: 344 CSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC 403
C+H+G++D+ F+MMS + + PT+EHY CMVD+L R GK+ EA+E + D
Sbjct: 415 CNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASI 474
Query: 404 LWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMK 463
L LLG C+ + +L+EL +SS Y +S++Y + G+WE V RR M+
Sbjct: 475 LLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Query: 464 ARGVAK 469
A V +
Sbjct: 535 AERVNR 540
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 17/300 (5%)
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
LRL + + T V +++ ++ E +Q H + LK G + S LV
Sbjct: 21 LRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAF 80
Query: 177 YA---KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNE 233
A + +++ A + P+ S+I Y + E AL ++ +M + + P++
Sbjct: 81 AATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDK 140
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
+ VLKAC++ ++G+Q+H IK G +V V + L +Y + G + + R
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
MP RD +SWN+++S + G ++A LFD+M E ++ F ++S + GLV
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEM--EERNVESWNF--MISGYAAAGLVKEA 256
Query: 354 WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI-----ESAEVDHGLCLWRIL 408
+ F M V + MV + G NE E +S E G L +L
Sbjct: 257 KEVFDSMP-----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVL 311
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ YA +G E +E+F +M + E + F L S+LS L G VH K+
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ +A ALV +Y+KCG +D AL F + ++ TW+++++ + G + AL +F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
M G P+ T +GV++AC+ + + + R++
Sbjct: 394 SEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL 427
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 264/475 (55%), Gaps = 10/475 (2%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRT-EFLDTGRQVHSLAMKNGLLS-IV 66
GL EA++L ++M ++E V S+L+ R R H+L + + + V
Sbjct: 127 GLLYEAMKLIKEMYFYGFIPKSELV-ASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 67 SVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCS 126
++ ALV +Y K A F+ KN ++W+AM++G + + E + LF +M
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 127 GVLPSEFTLVGVINACSDL---CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
+ P+ TL+ V+ AC +L ++V +++HG+S + G + ++ + MY +CG++
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLV--KEIHGFSFRHGCHADERLTAAFMTMYCRCGNV 303
Query: 184 ADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKAC 243
+ +R FE + DVV+W+S+I+GY + GD +NL +M+ E I N +T+ +++ AC
Sbjct: 304 SLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSAC 363
Query: 244 SSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWN 303
++ L +H+ I+K GF + +G+AL MYAKCGSL +F+ + +D++SW+
Sbjct: 364 TNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWS 423
Query: 304 AMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
+MI+ +GHG++ALE+F M+ G + D + F+ +LSAC+H GLV+ F + +
Sbjct: 424 SMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGK 482
Query: 364 FDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI-GA 422
+ + T+EHYAC +++L R GK+++A E + + +W LL C H D+ G
Sbjct: 483 YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGK 542
Query: 423 YAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
+LM+ + YVLLS I+T G + E VRR+M+ R + K G S IE
Sbjct: 543 IIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 190/360 (52%), Gaps = 17/360 (4%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G Q+H L +K G V+N+L+++YAK + F+ +++++++ +++ Q
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
G +A++L M+ G +P + ++ C+ + + + +M + + +Q V
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 170 L--SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
L ++LVDMY K A A F+ ++ + V WT++I+G V N ++E ++L+ MQ E
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 228 RIIPNELTMASVLKACSSLAALDQG----KQMHAGIIKYGFNLEVPVGSALSAMYAKCGS 283
+ PN +T+ SVL AC L+ G K++H ++G + + + +A MY +CG+
Sbjct: 246 NLRPNRVTLLSVLPAC---VELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN 302
Query: 284 LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+ ++F RDV+ W++MISG ++ G ++ + L ++M EG + ++VT + ++SA
Sbjct: 303 VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSA 362
Query: 344 CSHMGLVDRGWDYFKMMSDEFDITPTVEHY---ACMVDILSRAGKLNEAKE-FIESAEVD 399
C++ L+ + + + + H ++D+ ++ G L+ A+E F E E D
Sbjct: 363 CTNSTLL----SFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 17/238 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGYA G E + L QMR E E N L +I+S + L VHS +K
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEA-NSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G +S + + NAL+ +YAKCGSL A F K+ ++WS+M+ Y G +AL +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G + + +++AC+ + E + + + K + L + +++ +
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRF 502
Query: 181 GSLADARRGFEYV----QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
G + DA FE +P +W+S+++ + G L++ GK II NEL
Sbjct: 503 GKIDDA---FEVTINMPMKPSARIWSSLLSA----CETHGRLDVAGK-----IIANEL 548
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 114 EKALRLF----HSMHCSG---VLPSEFTLVGVINACS-DLCAIVEGRQMHGYSLKLGFGL 165
++ALRL+ HS+ +G +LPS VI AC+ + G Q+H LK G
Sbjct: 27 DEALRLYKLKIHSLGTNGFTAILPS------VIKACAFQQEPFLLGAQLHCLCLKAGADC 80
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
V +SL+ MYAK R+ F+ + D V + SII Q+G A+ L +M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE--VPVGSALSAMYAKCGS 283
IP +AS+L C+ + + + +M ++ ++ V + +AL MY K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 284 LDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+ +F +M ++ +SW AMISG N + ++LF M E +P+ VT +++L A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 344 C 344
C
Sbjct: 261 C 261
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 279/547 (51%), Gaps = 37/547 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GYAS +A +LF + + + + + SIL + L +G+++HS +++
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 61 G-LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
LL SV NAL++ YA+ G A F K+ I+W+A++ +A S + L L
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF---GLQLYVLSSLVDM 176
H + + T++ ++ C ++ I + +++HGYS+K G + + ++L+D
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 177 YAKCGSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM----------- 224
YAKCG++ A + F ++ +V + S+++GYV +G + A L+ +M
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 225 --------------------QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF 264
Q + PN +T+ ++L C+ LA+L +Q H II+ G
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 265 NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDK 324
++ + L +YAKCGSL Y +F RD++ + AM++G + +G G +AL ++
Sbjct: 600 G-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSH 658
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAG 384
M KPD V +L+AC H GL+ G + + + PT+E YAC VD+++R G
Sbjct: 659 MTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGG 718
Query: 385 KLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSS 444
+L++A F+ V+ +W LL C + D+G L++ S ++ +VL+S+
Sbjct: 719 RLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISN 778
Query: 445 IYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRL 504
+Y A +WE V +R +MK + + K GCSW+E+ +VFV GD HP+ D I +
Sbjct: 779 MYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNA 838
Query: 505 LTKLMKD 511
L MK+
Sbjct: 839 LYLQMKE 845
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 8/339 (2%)
Query: 16 ELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTL 75
+ + R G + V ++ L +GR +H K G ++ V+ +++ +
Sbjct: 6 QFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNM 65
Query: 76 YAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG-VLPSEFT 134
YAKC +DD + F + + + W+ ++TG + S E +R F +MH + PS T
Sbjct: 66 YAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRE-TMRFFKAMHFADEPKPSSVT 124
Query: 135 LVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL-ADARRGFEYV 193
V+ C L G+ MH Y +K G V ++LV MYAK G + DA F+ +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSL---AALD 250
DVV W +II G+ +N A + M E PN T+A+VL C+S+ A
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACR 244
Query: 251 QGKQMHAGIIKYGF-NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
G+Q+H+ +++ + V V ++L + Y + G +++ +F RM ++D++SWN +I+G
Sbjct: 245 SGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 310 SQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHM 347
+ N KA +LF ++ +G PD+VT +++L C+ +
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 7/345 (2%)
Query: 7 SLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIV 66
S+ +E + F+ M +E + +L R G+ +HS +K GL
Sbjct: 98 SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT 157
Query: 67 SVANALVTLYAKCGSL-DDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
V NALV++YAK G + DA F+ +K+ ++W+A++ G++++ A R F M
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217
Query: 126 SGVLPSEFTLVGVINACSDL---CAIVEGRQMHGYSLKLGF-GLQLYVLSSLVDMYAKCG 181
P+ T+ V+ C+ + A GRQ+H Y ++ + ++V +SLV Y + G
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 182 SLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASVL 240
+ +A F + D+V W +I GY N ++ A L+ + + + P+ +T+ S+L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLE-VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
C+ L L GK++H+ I+++ + LE VG+AL + YA+ G Y F M T+D+
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
ISWNA++ + + + L L +L E D+VT ++LL C
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 193/389 (49%), Gaps = 42/389 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSIL---SDLNRTEFLDTGRQVHSLA 57
+++G++ + +A F M E E N + ++L + +++ +GRQ+HS
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTE-PNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 58 MKNGLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
++ L V V N+LV+ Y + G +++A F G+K+ ++W+ ++ GYA + + KA
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKA 313
Query: 117 LRLFHSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ-LYVLSSLV 174
+LFH++ H V P T++ ++ C+ L + G+++H Y L+ + L+ V ++L+
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI 373
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
YA+ G + A F + D++ W +I+ + + LNL + E I + +
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSV 433
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGF---NLEVPVGSALSAMYAKCGSL------- 284
T+ S+LK C ++ + + K++H +K G E +G+AL YAKCG++
Sbjct: 434 TILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF 493
Query: 285 -------------------------DDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKAL 319
DD ++F M T D+ +W+ M+ +++ N+A+
Sbjct: 494 LGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAI 553
Query: 320 ELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
+F ++ G +P+TVT +NLL C+ +
Sbjct: 554 GVFREIQARGMRPNTVTIMNLLPVCAQLA 582
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 137/303 (45%), Gaps = 31/303 (10%)
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
SG + V+ AC+ + + GR +HG KLG V S+++MYAKC + D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 186 ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI-ERIIPNELTMASVLKACS 244
++ F + D V+W ++TG + E + + M + P+ +T A VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVSCGRE-TMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL-DDGYLIFWRMPTRDVISWN 303
L GK MH+ IIK G + VG+AL +MYAK G + D Y F + +DV+SWN
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 304 AMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS--------------HMGL 349
A+I+G S+N A F ML E T+P+ T N+L C+ H +
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE-FIESAEVDHGLCLWRIL 408
V R W + + F V Y R G++ EA F D L W ++
Sbjct: 254 VQRSW----LQTHVFVCNSLVSFYL-------RVGRIEEAASLFTRMGSKD--LVSWNVV 300
Query: 409 LGG 411
+ G
Sbjct: 301 IAG 303
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 253/495 (51%), Gaps = 43/495 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG G+ +A+++F +M N + S +S + + ++ G +VHS+A+K
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + V V N+LV +Y+KCG L+DA + F+ NK+ TW++M+TGY Q+G KA LF
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + + P+ T ++++ Y K
Sbjct: 442 TRMQDANLRPNIITW-----------------------------------NTMISGYIKN 466
Query: 181 GSLADARRGFEYVQ-----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
G +A F+ ++ Q + W II GY+QNG + AL L+ KMQ R +PN +T
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
+ S+L AC++L +++H +++ + V +AL+ YAK G ++ IF M
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 296 TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
T+D+I+WN++I G +G AL LF++M +G P+ T +++ A MG VD G
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
F +++++ I P +EH + MV + RA +L EA +FI+ + +W L GCR H
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIH 706
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEP-GCS 474
+ D+ +A E L L ++ ++S IY ALG L + + K+P G S
Sbjct: 707 GDIDMAIHAAENLFSLEPENTATESIVSQIY-ALGAKLGRSLEGNKPRRDNLLKKPLGQS 765
Query: 475 WIELKSLVHVFVVGD 489
WIE+++L+H F GD
Sbjct: 766 WIEVRNLIHTFTTGD 780
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 198/398 (49%), Gaps = 34/398 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ Y+ +E +LF M ++ ++F+ IL ++ G+ +HS+ +K
Sbjct: 152 MIGAYSRENRWREVAKLFRLMM-KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL 210
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ S + V+N+++ +YAKCG LD A + F ++ I W++++ Y Q+G E+A+ L
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M G+ P T +I GY+ +LG KC
Sbjct: 271 KEMEKEGISPGLVTWNILIG---------------GYN-QLG----------------KC 298
Query: 181 GSLADARRGFE-YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
+ D + E + DV WT++I+G + NG AL+++ KM + ++PN +T+ S
Sbjct: 299 DAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
+ ACS L ++QG ++H+ +K GF +V VG++L MY+KCG L+D +F + +DV
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
+WN+MI+G Q G+ KA ELF +M +P+ +T+ ++S G D F+
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
M + + + ++ + GK +EA E +
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 180/364 (49%), Gaps = 38/364 (10%)
Query: 50 GRQVHSLAMKNGLLS--IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGY 107
GR +H+ + GL + V V L+++YAKCG + DA + F+ +N TWSAM+ Y
Sbjct: 100 GRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 108 AQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL 167
++ + +LF M GVLP +F ++ C++ + G+ +H +KLG L
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
V +S++ +YAKCG L A + F +++ DV+ W S++ Y QNG E A+ L +M+ E
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
I P +T ++ + L D + + +G
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI----------------------- 313
Query: 288 YLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
T DV +W AMISGL NG +AL++F KM L G P+ VT ++ +SACS +
Sbjct: 314 --------TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
++++G + ++ + V +VD+ S+ GKL +A++ +S + + + W
Sbjct: 366 KVINQGSEVHS-IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNS 423
Query: 408 LLGG 411
++ G
Sbjct: 424 MITG 427
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 147/277 (53%), Gaps = 13/277 (4%)
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL----QL 167
++EKAL S+ G T + ++ +C D +I GR +H FGL +
Sbjct: 64 EAEKAL---DSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-----FGLFTEPDV 115
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
+V + L+ MYAKCG +ADAR+ F+ +++ ++ W+++I Y + + L+ M +
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
++P++ +L+ C++ ++ GK +H+ +IK G + + V +++ A+YAKCG LD
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 288 YLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
F RM RDVI+WN+++ QNG +A+EL +M EG P VT+ L+ + +
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAG 384
G D D + M + F IT V + M+ L G
Sbjct: 296 GKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNG 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 8/252 (3%)
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLE--VPVGSALSAMYAKCGSLDDGYLIFW 292
T +L++C ++ G+ +HA ++G E V V + L +MYAKCG + D +F
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
M R++ +W+AMI S+ + +LF M+ +G PD F +L C++ G V+
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC 412
G + + ++ + ++ + ++ G+L+ A +F + +LL C
Sbjct: 200 G-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYC 258
Query: 413 RNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPG 472
+N ++ + E E SP + +L Y LG+ + + + M+ G+ +
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV- 317
Query: 473 CSWIELKS-LVH 483
+W + S L+H
Sbjct: 318 FTWTAMISGLIH 329
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 218/379 (57%), Gaps = 2/379 (0%)
Query: 133 FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY 192
+ L + +C G H +LK GF +Y+ SSLV +Y G + +A + FE
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 193 VQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG 252
+ + +VV WT++I+G+ Q + L LY KM+ PN+ T ++L AC+ AL QG
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 253 KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQN 312
+ +H + G + + ++L +MY KCG L D + IF + +DV+SWN+MI+G +Q+
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 313 GHGNKALELFDKMLLE-GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
G +A+ELF+ M+ + GTKPD +T++ +LS+C H GLV G +F +M+ E + P +
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELN 359
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMEL 431
HY+C+VD+L R G L EA E IE+ + +W LL CR H + G A E+ + L
Sbjct: 360 HYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLML 419
Query: 432 GSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSM 491
++ +V L+++Y ++G W++ VR++MK +G+ PGCSWIE+ + V +F D
Sbjct: 420 EPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGS 479
Query: 492 HPQIDEIRSELRLLTKLMK 510
+ ++ EI L L M+
Sbjct: 480 NCRMLEIVHVLHCLIDHME 498
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 170/329 (51%), Gaps = 13/329 (3%)
Query: 41 LNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITW 100
LNR TG H LA+K G +S V + ++LV LY G +++A + FE +N ++W
Sbjct: 132 LNRD--FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSW 189
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
+AM++G+AQ + L+L+ M S P+++T +++AC+ A+ +GR +H +L
Sbjct: 190 TAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLH 249
Query: 161 LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
+G L++ +SL+ MY KCG L DA R F+ DVV W S+I GY Q+G A+ L
Sbjct: 250 MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIEL 309
Query: 221 YGKMQIER-IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYA 279
+ M + P+ +T VL +C + +G++ + ++G E+ S L +
Sbjct: 310 FELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLG 369
Query: 280 KCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGH---GNKALELFDKMLLEGTKPD-T 334
+ G L + + MP + + + W +++ +G G +A E ++++LE PD
Sbjct: 370 RFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAE--ERLMLE---PDCA 424
Query: 335 VTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
T V L + + +G K+M D+
Sbjct: 425 ATHVQLANLYASVGYWKEAATVRKLMKDK 453
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 3/215 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG+A ++L+ +MR + N++ T++LS + L GR VH +
Sbjct: 192 MISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM 250
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
GL S + ++N+L+++Y KCG L DA R F+ NK+ ++W++M+ GYAQ G + +A+ LF
Sbjct: 251 GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELF 310
Query: 121 H-SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M SG P T +GV+++C + EGR+ + G +L S LVD+ +
Sbjct: 311 ELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGR 370
Query: 180 CGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGD 213
G L +A E + +P+ V+W S++ +GD
Sbjct: 371 FGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 234/440 (53%), Gaps = 18/440 (4%)
Query: 80 GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLV--- 136
G + A + F KN + W++M+ GY + D A R F L E +V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD-------LSPERDIVLWN 94
Query: 137 GVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP 196
+I+ ++ ++E R + + +++++ YA G + R F+ + +
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMP----CRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSSLAALDQGKQM 255
+V W +I GY QNG L + +M E ++PN+ TM VL AC+ L A D GK +
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 256 HAGIIKYGFN-LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGH 314
H G+N ++V V +AL MY KCG+++ +F + RD+ISWN MI+GL+ +GH
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 315 GNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYA 374
G +AL LF +M G PD VTFV +L AC HMGLV+ G YF M +F I P +EH
Sbjct: 271 GTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG 330
Query: 375 CMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSP 434
C+VD+LSRAG L +A EFI V +W LLG + ++ DIG A E+L++L
Sbjct: 331 CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR 390
Query: 435 ESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQ 494
+ +V+LS+IY G+++D ++ M+ G KE G SWIE + F HP+
Sbjct: 391 NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPR 450
Query: 495 IDEIRSELRLLT--KLMKDE 512
+E++ LR L +++DE
Sbjct: 451 TEELQRILRELKSFNILRDE 470
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 143/310 (46%), Gaps = 44/310 (14%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY +G EA LF+QM C R V S
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPC---------------------------RDVMSW---- 124
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
N ++ YA G ++ R F+ +N +W+ ++ GYAQ+G + L F
Sbjct: 125 ---------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSF 175
Query: 121 HSMHCSG-VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFG-LQLYVLSSLVDMYA 178
M G V+P++ T+ V++AC+ L A G+ +H Y LG+ + + V ++L+DMY
Sbjct: 176 KRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYG 235
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KCG++ A F+ +++ D++ W ++I G +G ALNL+ +M+ I P+++T
Sbjct: 236 KCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVG 295
Query: 239 VLKACSSLAALDQG-KQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
VL AC + ++ G ++ + E+ + + ++ G L +MP +
Sbjct: 296 VLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVK 355
Query: 298 -DVISWNAMI 306
D + W ++
Sbjct: 356 ADAVIWATLL 365
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 31/246 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYA G E + F++M E N+ +T +LS + D G+ VH
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 61 GLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G + V+V NAL+ +Y KCG+++ A+ F+ ++ I+W+ M+ G A G +AL L
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
FH M SG+ P + T VGV+ AC + + +G L + ++ S++
Sbjct: 278 FHEMKNSGISPDKVTFVGVLCACKHMGLVEDG---------LAYFNSMFTDFSIMPEIEH 328
Query: 180 CGSLAD--ARRGF-----EYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
CG + D +R GF E++ + D V+W +++ GA +Y K+ I
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL----------GASKVYKKVDIGE 378
Query: 229 IIPNEL 234
+ EL
Sbjct: 379 VALEEL 384
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 173 LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER---- 228
L M G +A A + F + + +VVLWTS+I GY+ N D A Y + ER
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSA-RRYFDLSPERDIVL 92
Query: 229 ---IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
+I + M ++L+A S + M + G YA G ++
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEG--------------YANIGDME 138
Query: 286 DGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT-KPDTVTFVNLLSAC 344
+F MP R+V SWN +I G +QNG ++ L F +M+ EG+ P+ T +LSAC
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 345 SHMGLVDRG 353
+ +G D G
Sbjct: 199 AKLGAFDFG 207
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 252/483 (52%), Gaps = 44/483 (9%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ A G +E+++ F +M ++ + F++ S+L + G+ +H L +K
Sbjct: 88 MIGACARNGYYQESLDFFREMY-KDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S + ++L+ +Y+K G + +A + F G ++ + ++AM++GYA + +++AL L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 121 HSMHCSGVLPSEFTLVGVINACSDL------CAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
M G+ P T +I+ S + I+E + GY
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY----------------- 249
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
+PDVV WTSII+G V N E A + + +M + PN
Sbjct: 250 --------------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
T+ ++L AC++LA + GK++H + G V SAL MY KCG + + ++F +
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
P + +++N+MI + +G +KA+ELFD+M G K D +TF +L+ACSH GL D G
Sbjct: 350 PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ 409
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
+ F +M +++ I P +EHYACMVD+L RAGKL EA E I++ ++ L +W LL CRN
Sbjct: 410 NLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRN 469
Query: 415 HRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
H N ++ A + L EL S +LL+S+Y G WE V +++M+K + + G S
Sbjct: 470 HGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSS 529
Query: 475 WIE 477
W+E
Sbjct: 530 WVE 532
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 148/311 (47%), Gaps = 31/311 (9%)
Query: 43 RTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSA 102
R GR +H+ + +G+ + +A LVT Y +CG + DA + F+ ++
Sbjct: 28 RDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVV 87
Query: 103 MVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG 162
M+ A++G +++L F M+ G+ F + ++ A +L G+ +H LK
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 163 FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
+ +++SSL+DMY+K G + +AR+ F + + D+V++ ++I+GY N + ALNL
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCG 282
M++ I P+ +T +++ S + E V L M
Sbjct: 208 DMKLLGIKPDVITWNALISGFSHMRN------------------EEKVSEILELMCL--- 246
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
DGY DV+SW ++ISGL N KA + F +ML G P++ T + LL
Sbjct: 247 ---DGY-------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 343 ACSHMGLVDRG 353
AC+ + + G
Sbjct: 297 ACTTLAYMKHG 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 128 VLPSEFTLVGV------INACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
++PS F L+ + I A GR +H + + G + + LV Y +CG
Sbjct: 6 IVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECG 65
Query: 182 SLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
+ DAR+ F+ + + D+ +I +NG ++ +L+ + +M + + + + S+LK
Sbjct: 66 KVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLK 125
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS 301
A +L + GK +H ++K+ + + + S+L MY+K G + + +F + +D++
Sbjct: 126 ASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVV 185
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
+NAMISG + N ++AL L M L G KPD +T+ L+S SHM
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM 231
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 253/470 (53%), Gaps = 14/470 (2%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDD----ALRTFEFSGNKNSITWSAMVTG 106
+ HSL + +GL + L+T + +L+ A F+ NS + M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 107 YAQSGDSEKALRLFHSM---HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF 163
++S LR F M + PS T +I AC C G+Q+H + +K G
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 164 GLQL-YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
L +V + ++ +Y + L DAR+ F+ + QPDVV W ++ GYV+ G L ++
Sbjct: 148 FLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFK 207
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF-NLEVPVGSALSAMYAKC 281
+M + I P+E ++ + L AC+ + AL QGK +H + K + +V VG+AL MYAKC
Sbjct: 208 EMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKC 267
Query: 282 GSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE-GTKPDTVTFVNL 340
G ++ +F ++ R+V SW A+I G + G+ KA D++ E G KPD+V + +
Sbjct: 268 GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGV 327
Query: 341 LSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH 400
L+AC+H G ++ G + M + ITP EHY+C+VD++ RAG+L++A + IE +
Sbjct: 328 LAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKP 387
Query: 401 GLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS----PESSAYVLLSSIYTALGQWEDVE 456
+W LL GCR H+N ++G A + L++L E +A V LS+IY ++ + +
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAF 447
Query: 457 LVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLT 506
VR M++ RG+ K PG S +E+ +V FV GD HP + +I + + LL+
Sbjct: 448 KVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLS 497
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 137/268 (51%), Gaps = 5/268 (1%)
Query: 46 FLDTGRQVHSLAMKNGL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMV 104
F G+Q+H +KNG+ LS V ++ +Y + L DA + F+ + + W ++
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLM 190
Query: 105 TGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY-SLKLGF 163
GY + G + L +F M G+ P EF++ + AC+ + A+ +G+ +H + K
Sbjct: 191 NGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWI 250
Query: 164 GLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGK 223
++V ++LVDMYAKCG + A FE + + +V W ++I GY G + A +
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 224 MQIER-IIPNELTMASVLKACSSLAALDQGKQMHAGI-IKYGFNLEVPVGSALSAMYAKC 281
++ E I P+ + + VL AC+ L++G+ M + +YG + S + + +
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRA 370
Query: 282 GSLDDGYLIFWRMPTRDVIS-WNAMISG 308
G LDD + +MP + + S W A+++G
Sbjct: 371 GRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY GL E +E+F++M E +EF +T+ L+ + L G+ +H K
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIE-PDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 61 GLL-SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ S V V ALV +YAKCG ++ A+ FE +N +W+A++ GYA G ++KA
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 120 FHSMHCS-GVLPSEFTLVGVINACSDLCAIVEGRQM-HGYSLKLGFGLQLYVLSSLVDMY 177
+ G+ P L+GV+ AC+ + EGR M + G + S +VD+
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 178 AKCGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGDFE-GALNLYGKMQIER 228
+ G L DA E + +P +W +++ G + + E G L + + +E+
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEK 420
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 256/479 (53%), Gaps = 14/479 (2%)
Query: 42 NRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDD----ALRTFEFSGNKNS 97
R + + HSL + +GL + L+T + +L+ A F+ NS
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSM---HCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
+ M+ ++S LR F M + PS T +I AC C G+Q+
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 155 HGYSLKLGFGLQ-LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
H + +K G L +V + ++ +Y + L DAR+ F+ + QPDVV W ++ GYV+ G
Sbjct: 139 HCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF-NLEVPVGS 272
L ++ +M ++ + P+E ++ + L AC+ + AL QGK +H + K + +V VG+
Sbjct: 199 GSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGT 258
Query: 273 ALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE-GTK 331
AL MYAKCG ++ +F ++ R+V SW A+I G + G+ KA+ +++ E G K
Sbjct: 259 ALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIK 318
Query: 332 PDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE 391
PD+V + +L+AC+H G ++ G + M ++ITP EHY+C+VD++ RAG+L++A
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALN 378
Query: 392 FIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS----PESSAYVLLSSIYT 447
IE + +W LL GCR H+N ++G A + L++L E +A V LS+IY
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYF 438
Query: 448 ALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLT 506
++ + + VR M++ RGV K PG S +E+ V FV GD HP + +I + + LL+
Sbjct: 439 SVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLS 497
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY GL E +E+F +M + E +EF +T+ L+ + L G+ +H K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLE-PDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 61 GLL-SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ S V V ALV +YAKCG ++ A+ F+ +N +W+A++ GYA G ++KA+
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 120 FHSMHCS-GVLPSEFTLVGVINACSDLCAIVEGRQM-HGYSLKLGFGLQLYVLSSLVDMY 177
+ G+ P L+GV+ AC+ + EGR M + + S +VD+
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 178 AKCGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGDFE-GALNLYGKMQIER 228
+ G L DA E + +P +W +++ G + + E G L + + +E+
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEK 420
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 251/489 (51%), Gaps = 37/489 (7%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYA--KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
++H+L + GL + ++ A G +D A + + + W+ ++ G++
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
S + EK++ ++ M G+LP T ++ + S L G +H +K G L++
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 170 LSSLV-------------------------------DMYAKCGSLADARRGFEYVQQPDV 198
++L+ D YAK G + AR F+ + + DV
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 199 VLWTSIITGYVQNGDFEGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
V W+S+I GYV+ G++ AL ++ +M ++ NE+TM SV+ AC+ L AL++GK +H
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR--DVISWNAMISGLSQNGHG 315
I+ L V + ++L MYAKCGS+ D + +F+R + D + WNA+I GL+ +G
Sbjct: 266 YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFI 325
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC 375
++L+LF KM PD +TF+ LL+ACSH GLV W +FK + E P EHYAC
Sbjct: 326 RESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYAC 384
Query: 376 MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPE 435
MVD+LSRAG + +A +FI + + LL GC NH N ++ G+KL+EL
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHN 444
Query: 436 SSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQI 495
YV L+++Y Q+ +R M+ +GV K G S ++L H F+ D H
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 496 DEIRSELRL 504
D+I + L+L
Sbjct: 505 DKIYAVLQL 513
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY G +A+E+F+QM NE + S++ L+ G+ VH +
Sbjct: 211 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 270
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK--NSITWSAMVTGYAQSGDSEKALR 118
L V + +L+ +YAKCGS+ DA F + K +++ W+A++ G A G ++L+
Sbjct: 271 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 330
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LFH M S + P E T + ++ ACS + E + G + + +VD+ +
Sbjct: 331 LFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLS 390
Query: 179 KCGSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
+ G + DA E +P + +++ G + +G+ E A + GK IE
Sbjct: 391 RAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV-GKKLIE 439
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 257/509 (50%), Gaps = 40/509 (7%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+Q+H+ ++ G+ + L+ + +L A + F+ N + ++ ++ Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
+++ L++ + G+ PS T + A + + R +H + GF +
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
++L+ YAK G+L ARR F+ + + DV +W ++ITGY + GD + A+ L+ M + +
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 231 --------------------------------PNELTMASVLKACSSLAALDQGKQMHAG 258
PN +T+ SVL AC++L L+ G+++
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 259 IIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM-PTRDVISWNAMISGLSQNGHGNK 317
+ GF + V +A MY+KCG +D +F + R++ SWN+MI L+ +G ++
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
AL LF +ML EG KPD VTFV LL AC H G+V +G + FK M + I+P +EHY CM+
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 378 DILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESS 437
D+L R GKL EA + I++ + +W LLG C H N +I A E L +L
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPG 420
Query: 438 AYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW-IELKSLVHVFVVGDSMHPQID 496
V++S+IY A +W+ V +R++MK + K G S+ +E+ VH F V D HP+
Sbjct: 421 NCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSY 480
Query: 497 EIRSELRLLTKLMKDEGYQPHLDSLPESE 525
EI L + + MK E + DSL + E
Sbjct: 481 EIYQVLEEIFRRMKLE--KSRFDSLLQPE 507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 25/238 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG++ G EA+++F M ++ N + S+L L+ GR++ A +N
Sbjct: 185 VISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN 244
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGN-KNSITWSAMVTGYAQSGDSEKALRL 119
G + V NA + +Y+KCG +D A R FE GN +N +W++M+ A G ++AL L
Sbjct: 245 GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTL 304
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM-------HGYSLKLGFGLQLYVLSS 172
F M G P T VG++ AC +V+G+++ H S KL
Sbjct: 305 FAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH------YGC 358
Query: 173 LVDMYAKCGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
++D+ + G L +A + + +PD V+W +++ GA + +G ++I I
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL----------GACSFHGNVEIAEI 406
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/481 (31%), Positives = 256/481 (53%), Gaps = 10/481 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTG--RQVHSLAM 58
++ YA + LF Q+ + +N F + +E DT R +H +A+
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDN-FTYACLARGF--SESFDTKGLRCIHGIAI 133
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
+GL +A+V Y+K G + +A + F + + W+ M+ GY G +K +
Sbjct: 134 VSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGIN 193
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF+ M G P+ +T+V + + D ++ +H + LK+ YV +LV+MY+
Sbjct: 194 LFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYS 253
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
+C +A A F + +PD+V +S+ITGY + G+ + AL+L+ ++++ P+ + +A
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL +C+ L+ GK++H+ +I+ G L++ V SAL MY+KCG L +F +P ++
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
++S+N++I GL +G + A E F ++L G PD +TF LL C H GL+++G + F+
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE--VDHGLCLWRILLGGCRNHR 416
M EF I P EHY MV ++ AGKL EA EF+ S + +D G + LL C H
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSG--ILGALLSCCEVHE 491
Query: 417 NYDIGAYAGEKLMELGSPESSAY-VLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
N + E + + G S Y V+LS++Y G+W++VE +R + K PG SW
Sbjct: 492 NTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Query: 476 I 476
Sbjct: 552 F 552
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 156/342 (45%), Gaps = 7/342 (2%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+++HS K+ L A L YA L A + F+ ++ W++++ YA++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
L LF + S P FT + S+ R +HG ++ G G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
S++V Y+K G + +A + F + PD+ LW +I GY G ++ +NL+ MQ
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
PN TM ++ + L +HA +K + VG AL MY++C + +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 291 FWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
F + D+++ +++I+G S+ G+ +AL LF ++ + G KPD V +L +C+ +
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 351 DRGWD---YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
G + Y + E DI + ++D+ S+ G L A
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVC----SALIDMYSKCGLLKCA 362
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 232/441 (52%), Gaps = 36/441 (8%)
Query: 72 LVTLYAKCGSL---DDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
L + CGSL D A R F N N + ++AM+ Y+ G ++L F SM G+
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
E+T ++ +CS L + G+ +HG ++ GF + +V++Y G + DA++
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII------------------ 230
F+ + + +VV+W +I G+ +GD E L+L+ +M I+
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 231 -------------PNELTMASVLKACSSLAALDQGKQMHAGIIKYG-FNLEVPVGSALSA 276
P+E T+ +VL +SL LD GK +H+ G F + VG+AL
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 277 MYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTV 335
Y K G L+ IF +M R+V+SWN +ISG + NG G ++LFD M+ EG P+
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 336 TFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
TF+ +L+ CS+ G V+RG + F +M + F + EHY MVD++SR+G++ EA +F+++
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 396 AEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDV 455
V+ +W LL CR+H + + A +L+++ S YVLLS++Y G+W+DV
Sbjct: 399 MPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 456 ELVRRMMKARGVAKEPGCSWI 476
E VR +MK + K G S I
Sbjct: 459 EKVRTLMKKNRLRKSTGQSTI 479
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 158/368 (42%), Gaps = 40/368 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ Y+ +G E++ F M+ + E+ +L + L G+ VH ++
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWAD-EYTYAPLLKSCSSLSDLRFGKCVHGELIRT 131
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + + +V LY G + DA + F+ +N + W+ M+ G+ SGD E+ L LF
Sbjct: 132 GFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLF 191
Query: 121 HSM----------------HC---------------SGVLPSEFTLVGVINACSDLCAIV 149
M C G P E T+V V+ + L +
Sbjct: 192 KQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLD 251
Query: 150 EGRQMHGYSLKLG-FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
G+ +H + G F + V ++LVD Y K G L A F +Q+ +VV W ++I+G
Sbjct: 252 TGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGS 311
Query: 209 VQNGDFEGALNLYGKMQIE-RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
NG E ++L+ M E ++ PNE T VL CS +++G+++ G++ F LE
Sbjct: 312 AVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELF-GLMMERFKLE 370
Query: 268 VPVG--SALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFDK 324
A+ + ++ G + + + MP + W +++S HG+ L
Sbjct: 371 ARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSAC--RSHGDVKLAEVAA 428
Query: 325 MLLEGTKP 332
M L +P
Sbjct: 429 MELVKIEP 436
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 264/517 (51%), Gaps = 12/517 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ Y ++ L+ +R E + F T++ + + + G Q+HS +
Sbjct: 48 MIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRF 107
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + + V+ +V +YAK G + A F+ +++ ++W+A+++GY + G+ + A +LF
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 121 HSM-HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M H V+ + G + + A +M ++ ++++ Y
Sbjct: 168 DQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV--------ITWTTMIHGYCN 219
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ-IERIIPNELTMAS 238
+ AR+ F+ + + ++V W ++I GY QN + + L+ +MQ + P+++T+ S
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
VL A S AL G+ H + + + +V V +A+ MY+KCG ++ IF MP +
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
V SWNAMI G + NG+ AL+LF M++E KPD +T + +++AC+H GLV+ G +F
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
+M E + +EHY CMVD+L RAG L EA++ I + + + L C +++
Sbjct: 399 VMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDI 457
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+ +K +EL YVLL ++Y A +W+D +V+ +M+ KE GCS IE+
Sbjct: 458 ERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQ 515
+V F+ GD+ HP I L L M +E Y
Sbjct: 518 NYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 280/549 (51%), Gaps = 50/549 (9%)
Query: 46 FLDTGRQVHSLAMKNGLLSIVS--VANALVTLYAKCGSLDDALRTFEFS--GNKNSITWS 101
FL G+++H++ +GL ++NAL YA G + A + F+ K+++ W+
Sbjct: 21 FLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWT 80
Query: 102 AMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL 161
+++ +++ G +++LF M V + ++V + C+ L + +Q HG ++K+
Sbjct: 81 TLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLY 221
G + V ++L+DMY KCG +++ +R FE +++ VV WT ++ V+ E ++
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 222 GKMQIERIIP--------------------------------NELTMASVLKACSSLAAL 249
+M + N +T+ S+L AC+ L
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 250 DQGKQMHAGIIKYGFNL-------EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISW 302
G+ +H +K + +V VG+AL MYAKCG++D +F M R+V++W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 303 NAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD 362
NA+ SGL+ +G G +++F +M+ E KPD +TF +LSACSH G+VD GW F +
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF 379
Query: 363 EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGA 422
+ + P V+HYACMVD+L RAG + EA+ + V + LLG C H +I
Sbjct: 380 -YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 423 YAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLV 482
+L+++ + +L+S++Y A G+ + + +R ++ RG+ K PG S I + V
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSV 498
Query: 483 HVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGS---HE 539
H F GD HP+ EI +L + + ++ GY P + L S + G DL ++E + H
Sbjct: 499 HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLV-SHSEG-DLEEKEQALCCHS 556
Query: 540 IQLRVCGGV 548
+L VC G+
Sbjct: 557 EKLAVCFGL 565
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 164/336 (48%), Gaps = 43/336 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+LS ++ GL +++LF +MR + E ++ V+ + + E L +Q H +A+K
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVC-LFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-------------------FSG-------- 93
G+L+ V V NAL+ +Y KCG + + R FE + G
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 94 ----NKNSITWSAMVTGYAQSGDSEKALRLFHSM--HCSGVLPSEFTLVGVINACSDLCA 147
+N++ W+ MV GY +G + + L L M C L + TL +++AC+
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL-NFVTLCSMLSACAQSGN 259
Query: 148 IVEGRQMHGYSLKLGFGL-------QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVL 200
+V GR +H Y+LK + + V ++LVDMYAKCG++ + F +++ +VV
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVT 319
Query: 201 WTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII 260
W ++ +G +G ++++ +M I + P++LT +VL ACS +D+G + +
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR 378
Query: 261 KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
YG +V + + + + G +++ ++ MP
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 27/250 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GY G +E +EL +M G N L S+LS ++ L GR VH A+K
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKK 273
Query: 61 GLL-------SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDS 113
++ V V ALV +YAKCG++D ++ F +N +TW+A+ +G A G
Sbjct: 274 EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKG 333
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEG-RQMHGYSLKLGFGLQLYV--L 170
+ +F M V P + T V++ACS + EG R H SL+ +GL+ V
Sbjct: 334 RMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFH--SLRF-YGLEPKVDHY 389
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQP--DVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
+ +VD+ + G + +A + P +VVL G G+ +++GK++I
Sbjct: 390 ACMVDLLGRAGLIEEAEILMREMPVPPNEVVL-----------GSLLGSCSVHGKVEIAE 438
Query: 229 IIPNELTMAS 238
I EL S
Sbjct: 439 RIKRELIQMS 448
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 206/346 (59%), Gaps = 1/346 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY GL EA LFE NE + +L+ +R + GRQVH +K
Sbjct: 154 MIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV 213
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ +++ V ++LV YA+CG L ALR F+ K+ I+W+A+++ ++ G KA+ +F
Sbjct: 214 GVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M LP+EFT+ ++ ACS+ A+ GRQ+H +K ++V +SL+DMYAKC
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
G ++D R+ F+ + + V WTSII + + G E A++L+ M+ +I N LT+ S+L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
+AC S+ AL GK++HA IIK V +GS L +Y KCG D + + ++P+RDV+
Sbjct: 393 RACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVV 452
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
SW AMISG S GH ++AL+ +M+ EG +P+ T+ + L AC++
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 169/299 (56%), Gaps = 2/299 (0%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+++H++A+K ++ N L++ + G L A + F+ KN++TW+AM+ GY +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 111 GDSEKALRLFHSMHCSGV-LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
G ++A LF G+ +E V ++N CS GRQ+HG +K+G G L V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIV 220
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
SSLV YA+CG L A R F+ +++ DV+ WT++I+ + G A+ ++ M
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
+PNE T+ S+LKACS AL G+Q+H+ ++K +V VG++L MYAKCG + D
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
+F M R+ ++W ++I+ ++ G G +A+ LF M + +T V++L AC +G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 246/457 (53%), Gaps = 34/457 (7%)
Query: 5 YASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLS 64
Y +G EA+ +F +M N V +S++ +R+ L+ G+ +H++A+K +++
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTV-SSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 65 IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH 124
V+ ++ +Y KC L+ A R F+ + +K+ +W++ ++GYA SG + +A LF M
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 125 CSGVLP-------------------------------SEFTLVGVINACSDLCAIVEGRQ 153
++ TLV ++N CS + + G+Q
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ-PDVVLWTSIITGYVQNG 212
HG+ + G+ + V ++L+DMY KCG+L A F + + D V W +++TG + G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 213 DFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGS 272
E AL+ + MQ+E P++ T+A++L C+++ AL+ GK +H +I+ G+ ++V +
Sbjct: 477 RSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 273 ALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
A+ MY+KC D +F TRD+I WN++I G +NG + ELF + EG KP
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 333 DTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
D VTF+ +L AC G V+ G+ YF MS ++ I+P VEHY CM+++ + G L++ +EF
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEF 655
Query: 393 IESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM 429
+ D + + + C+ +R +GA+A ++LM
Sbjct: 656 LLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 224/485 (46%), Gaps = 72/485 (14%)
Query: 2 LSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTS------------ILSDLNR------ 43
+ Y G +A ELFE+M E + G V+T+ + +NR
Sbjct: 103 IEAYGKCGCVDDARELFEEMP-ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRAT 161
Query: 44 -TEF------------LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFE 90
T F L RQ+H +K G V + ++V +Y KC + DA R F+
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 91 FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVE 150
N + ++W+ +V Y + G +++A+ +F M V P T+ V+ ACS A+
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEV 281
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G+ +H ++KL V +S+ DMY KC L ARR F+ + D+ WTS ++GY
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAM 341
Query: 211 NGDFEGALNLYGKMQIERIIP-------------------------------NELTMASV 239
+G A L+ M I+ + +T+ +
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI 401
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT-RD 298
L CS ++ + GKQ H I ++G++ V V +AL MY KCG+L + F +M RD
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+SWNA+++G+++ G +AL F+ M +E KP T LL+ C+++ ++ G
Sbjct: 462 EVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHG 520
Query: 359 -MMSDEFDITPTVEHYACMVDILSRAGKLNEAKE-FIESAEVDHGLCLWR-ILLGGCRNH 415
++ D + I + MVD+ S+ + A E F E+A D L LW I+ G CRN
Sbjct: 521 FLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATRD--LILWNSIIRGCCRNG 576
Query: 416 RNYDI 420
R+ ++
Sbjct: 577 RSKEV 581
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 167/316 (52%), Gaps = 4/316 (1%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
R+V S + L + + N + Y KCG +DDA FE ++ +W+A++T AQ
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
+G S++ R+F M+ GV +E + GV+ +C + + RQ+H +K G+ + +
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDL 199
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
+S+VD+Y KC ++DARR F+ + P V W I+ Y++ G + A+ ++ KM +
Sbjct: 200 ETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV 259
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
P T++SV+ ACS AL+ GK +HA +K + V +++ MY KC L+
Sbjct: 260 RPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARR 319
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+F + ++D+ SW + +SG + +G +A ELFD M + + V++ +L H
Sbjct: 320 VFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM----PERNIVSWNAMLGGYVHAHE 375
Query: 350 VDRGWDYFKMMSDEFD 365
D D+ +M E +
Sbjct: 376 WDEALDFLTLMRQEIE 391
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 7/256 (2%)
Query: 93 GNKNSITWSAMVTGYAQSGDSEKALR-LFHSMHCSGVLPSEFTLV-GVINACSDLCAIVE 150
G +T + + + + G+ KA+ LF S P + L + +CS +V+
Sbjct: 25 GTGTKLTVTRQILEHLEGGNVSKAVSVLFASPE-----PVSYWLYERLFRSCSSKALVVQ 79
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
R++ + + +++L+ ++ Y KCG + DAR FE + + D W ++IT Q
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
NG + ++ +M + + E + A VLK+C + L +Q+H ++KYG++ V +
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDL 199
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
+++ +Y KC + D +F + +SWN ++ + G ++A+ +F KML
Sbjct: 200 ETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV 259
Query: 331 KPDTVTFVNLLSACSH 346
+P T +++ ACS
Sbjct: 260 RPLNHTVSSVMLACSR 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 97/189 (51%), Gaps = 13/189 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+L+G A +G +++A+ FE M+ E + +++ L ++L+ L+ G+ +H +++
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEAKP--SKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G V + A+V +Y+KC D A+ F+ + ++ I W++++ G ++G S++ LF
Sbjct: 526 GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY------SLKLGFGLQLYVLSSLV 174
+ GV P T +G++ AC I EG G+ S K Q+ ++
Sbjct: 586 MLLENEGVKPDHVTFLGILQAC-----IREGHVELGFQYFSSMSTKYHISPQVEHYDCMI 640
Query: 175 DMYAKCGSL 183
++Y K G L
Sbjct: 641 ELYCKYGCL 649
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 234/449 (52%), Gaps = 16/449 (3%)
Query: 38 LSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNS 97
L+ +++ + L +Q+H+ + GL + L+ L + L AL N +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSV 71
Query: 98 ITWSAMVTGYAQSGDSEKALRLFH------SMHCSGVLPSEFTLVGVINACS-DLCAIVE 150
++ +++ + +S + F S + V P+EFT + A D
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 151 GRQMHGYSLKL--GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
GR +H + LK +V ++LV YA CG L +AR FE +++PD+ W +++ Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 209 VQNGDF---EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFN 265
+ + E L L+ +MQ+ PNEL++ +++K+C++L +G H ++K
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 266 LEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
L VG++L +Y+KCG L +F M RDV +NAMI GL+ +G G + +EL+ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
+ +G PD+ TFV +SACSH GLVD G F M + I P VEHY C+VD+L R+G+
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 386 LNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSI 445
L EA+E I+ V LWR LG + H +++ G A + L+ L S YVLLS+I
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 446 YTALGQWEDVELVRRMMKARGVAKEPGCS 474
Y + +W DVE R +MK V K PG S
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 1 MLSGYAS---LGLAKEAIELFEQMRCEEEEGENEFVLTSIL-SDLNRTEFLDTGRQVHSL 56
+L+ YA+ + +E + LF +M+ NE L +++ S N EF+ G H
Sbjct: 187 LLAAYANSEEIDSDEEVLLLFMRMQVRP----NELSLVALIKSCANLGEFV-RGVWAHVY 241
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
+KN L V +L+ LY+KCG L A + F+ ++ ++AM+ G A G ++
Sbjct: 242 VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEG 301
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV--LSSLV 174
+ L+ S+ G++P T V I+ACS + EG Q+ S+K +G++ V LV
Sbjct: 302 IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFN-SMKAVYGIEPKVEHYGCLV 360
Query: 175 DMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFE 215
D+ + G L +A + + +P+ LW S + +GDFE
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 269/550 (48%), Gaps = 80/550 (14%)
Query: 2 LSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNG 61
L+ + S+G+ + A+EL + E + L +L ++ RQ+H K+G
Sbjct: 31 LARFGSIGVLRAAVELIN-----DGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHG 85
Query: 62 LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFH 121
+S ++N+L+ Y SL+DA + F+ + + I+W+++V+GY QSG ++ + LF
Sbjct: 86 FVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFL 145
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL-QLYVLSSLVDMYAKC 180
+H S V P+EF+ + AC+ L G +H +KLG + V + L+DMY KC
Sbjct: 146 ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC 205
Query: 181 GSLADARRGFEYVQQ-------------------------------PDVVLWTSIITGYV 209
G + DA F+++++ PD V + +I +V
Sbjct: 206 GFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFV 265
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVL-----------------KACSSLAALDQ- 251
++GDF A + M PN + ++L K SS D+
Sbjct: 266 KSGDFNNAFQVLSDMPN----PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEY 321
Query: 252 -----------------GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
G +HA K G + V V SAL MY+KCG L L+FW M
Sbjct: 322 SLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTM 381
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGL-VDR 352
P +++I WN MISG ++NG +A++LF+++ E KPD TF+NLL+ CSH + ++
Sbjct: 382 PRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEV 441
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGC 412
YF+MM +E+ I P+VEH ++ + + G++ +AK+ I+ + WR LLG C
Sbjct: 442 MLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGAC 501
Query: 413 RNHRNYDIGAYAGEKLMELGSPESSA--YVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
++ K++ELG + Y+++S++Y +W +V +R++M+ GV KE
Sbjct: 502 SARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKE 561
Query: 471 PGCSWIELKS 480
G SWI+ ++
Sbjct: 562 VGSSWIDSRT 571
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 11/299 (3%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
+S +WS +V A+ G S LR + G P LV ++ + + RQ+H
Sbjct: 20 SSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFE 215
GY K GF + +SL+ Y SL DA + F+ + PDV+ W S+++GYVQ+G F+
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 216 GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL-EVPVGSAL 274
+ L+ ++ + PNE + + L AC+ L G +H+ ++K G V VG+ L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 275 SAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
MY KCG +DD L+F M +D +SWNA+++ S+NG L F +M PDT
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDT 254
Query: 335 VTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
VT+ L+ A G + F+++SD + P + ++ + K EA EF
Sbjct: 255 VTYNELIDAFVKSGDFNNA---FQVLSDMPN--PNSSSWNTILTGYVNSEKSGEATEFF 308
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 12/246 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQV-HSLAMK 59
++ Y G +A+ +F+ M E ++ +I++ +R L+ G H +
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHM-----EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ + N L+ + K G ++A + N NS +W+ ++TGY S S +A
Sbjct: 253 DTV-----TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEF 307
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F MH SGV E++L V+ A + L + G +H + KLG ++ V S+L+DMY+K
Sbjct: 308 FTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSK 367
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII-PNELTMAS 238
CG L A F + + ++++W +I+GY +NGD A+ L+ +++ ER + P+ T +
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 239 VLKACS 244
+L CS
Sbjct: 428 LLAVCS 433
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 283/590 (47%), Gaps = 106/590 (17%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSL---- 56
ML+ G +++A+ELF++M N ++++ L R ++ +QV
Sbjct: 144 MLTALCDDGRSEDAVELFDEM-----PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR 198
Query: 57 ------AMKNGLL-----------------SIVSVANALVTLYAKCGSLDDALRTFEFSG 93
AM G + V ++V Y + G + +A R F
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMH--CSGVLPSEFTLVGVINACSDLCAIVE- 150
+N ++W+AM++G+A + +AL LF M V P+ TL+ + AC L
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 151 -GRQMHGYSLKLGFG------------LQLYVLSSLV--------------------DMY 177
G Q+H + G+ + +Y S L+ + Y
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRY 378
Query: 178 AKCGSLADARRGFEYVQQ-PDVVLWTSIITGYVQNGDFEGALNLYGKMQ----------I 226
K G L A FE V+ D V WTS+I GY++ GD A L+ K+ I
Sbjct: 379 LKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 227 ERIIPNEL---------------------TMASVLKACSSLAALDQGKQMHAGIIKYG-- 263
++ NEL T + +L + + + LDQGK +H I K
Sbjct: 439 SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC 498
Query: 264 FNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFD 323
++ ++ + ++L +MYAKCG+++D Y IF +M +D +SWN+MI GLS +G +KAL LF
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 324 KMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRA 383
+ML G KP++VTF+ +LSACSH GL+ RG + FK M + + I P ++HY M+D+L RA
Sbjct: 559 EMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRA 618
Query: 384 GKLNEAKEFIESAEVDHGLCLWRILLGGC-RNHRNYD---IGAYAGEKLMELGSPESSAY 439
GKL EA+EFI + ++ LLG C N R+ D I A +L+EL + +
Sbjct: 619 GKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGH 678
Query: 440 VLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGD 489
V L ++Y LG+ + + +R+ M +GV K PGCSW+ + +VF+ GD
Sbjct: 679 VALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 173/377 (45%), Gaps = 62/377 (16%)
Query: 35 TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKC--------------- 79
TS+LS +T +LD R + + + +++ NA++T Y KC
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVT----CNAMLTGYVKCRRMNEAWTLFREMPK 136
Query: 80 ---------------GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH 124
G +DA+ F+ +N ++W+ +VTG ++GD EKA ++F +M
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 125 CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFG----LQLYVLSSLVDMYAKC 180
V+ + G I E M KL FG + +S+V Y +
Sbjct: 197 SRDVVSWNAMIKGYI----------ENDGME--EAKLLFGDMSEKNVVTWTSMVYGYCRY 244
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ--IERIIPNELTMAS 238
G + +A R F + + ++V WT++I+G+ N + AL L+ +M+ ++ + PN T+ S
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 239 VLKACSSLAALDQ--GKQMHAGIIKYGF---NLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
+ AC L + G+Q+HA +I G+ + + + +L MYA G + +
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLL-- 362
Query: 294 MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
+ D+ S N +I+ +NG +A LF+++ + D V++ +++ G V R
Sbjct: 363 NESFDLQSCNIIINRYLKNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRA 419
Query: 354 WDYFKMMSDEFDITPTV 370
+ F+ + D+ +T TV
Sbjct: 420 FGLFQKLHDKDGVTWTV 436
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 27/258 (10%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+ W+++++ YA++G ++A LF V+P ++ + L V+ R+M+
Sbjct: 78 VYWTSLLSKYAKTGYLDEARVLFE------VMPER----NIVTCNAMLTGYVKCRRMN-E 126
Query: 158 SLKLGFGLQLYVLSSLVDMYAKC--GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFE 215
+ L + V+S V + A C G DA F+ + + +VV W +++TG ++NGD E
Sbjct: 127 AWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDME 186
Query: 216 GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALS 275
A ++ M ++ + +++K +++ K + +G E V + S
Sbjct: 187 KAKQVFDAMPSRDVV----SWNAMIKGYIENDGMEEAKLL------FGDMSEKNVVTWTS 236
Query: 276 AMYAKC--GSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML--LEGTK 331
+Y C G + + Y +F MP R+++SW AMISG + N +AL LF +M ++
Sbjct: 237 MVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVS 296
Query: 332 PDTVTFVNLLSACSHMGL 349
P+ T ++L AC +G+
Sbjct: 297 PNGETLISLAYACGGLGV 314
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/538 (30%), Positives = 263/538 (48%), Gaps = 77/538 (14%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYA EA+ELF +MR NE L +++S + + R + SLA+K
Sbjct: 144 LIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKL 202
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L V V+ L+ +Y C L DA + F+ +N +TW+ M+ GY+++G E+A LF
Sbjct: 203 KLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELF 262
Query: 121 HS--------------------------------MHCSGVLPSEFTLVGVINACSDLCAI 148
+ C G+ PSE +V +++A +
Sbjct: 263 DQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLSASARSVGS 321
Query: 149 VEGRQMHGYSLKLGFGLQLYVLSSLVDMYA------------------------------ 178
+G Q+HG +K GF ++ ++++ YA
Sbjct: 322 SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF 381
Query: 179 -KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-QIERIIPNELTM 236
K G + AR F+ D+ W ++I+GY Q+ + AL+L+ +M ++ P+ +TM
Sbjct: 382 VKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITM 441
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA----MYAKCGSLDDGYLIFW 292
SV A SSL +L++GK+ H Y +P L+A MYAKCGS++ IF
Sbjct: 442 VSVFSAISSLGSLEEGKRAH----DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH 497
Query: 293 R---MPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+ + + + WNA+I G + +GH AL+L+ + KP+++TFV +LSAC H GL
Sbjct: 498 QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGL 557
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
V+ G YF+ M + I P ++HY CMVD+L +AG+L EAKE I+ V + +W +LL
Sbjct: 558 VELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLL 617
Query: 410 GGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGV 467
R H N +I A +L + V+LS++Y G+WEDV LVR M+ R V
Sbjct: 618 SASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 202/461 (43%), Gaps = 101/461 (21%)
Query: 26 EEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKC------ 79
E + E L S L + + GRQ+H +K+GL S + N+++ +YAKC
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 80 -------GSLD------------------DALRTFEFSGNKNSITWSAMVTGYAQSGDSE 114
LD DAL+ F+ ++ ++++ ++ GYAQ+
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
+A+ LF M G++ +E TL VI+ACS L I + R + ++KL +++V ++L+
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII---- 230
MY C L DAR+ F+ + + ++V W ++ GY + G E A L+ ++ + I+
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 231 ---------------------------PNELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
P+E+ M +L A + +G Q+H I+K G
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 264 FNL-------------------------------EVPVGSALSAMYAKCGSLDDGYLIFW 292
F+ + +AL A + K G ++ +F
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLVD 351
+ +D+ SWNAMISG +Q+ AL LF +M+ KPD +T V++ SA S +G ++
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 352 ---RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
R DY + I P A ++D+ ++ G + A
Sbjct: 456 EGKRAHDYLNFST----IPPNDNLTAAIIDMYAKCGSIETA 492
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 248/486 (51%), Gaps = 28/486 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDT---GRQVHSLA 57
M+S ++ G +A LF+++ E ++F L+++L+ L + D+ G+ VH
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVV--SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
K G L+ LR S ++ +W+++++G A SG ++L
Sbjct: 524 QKLGDLT------------------SAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 118 RLFHSMHCSGVLPSEF-TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
R F +M G + + TL+G I+A +L +++GR HG ++K L + ++L+ M
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
Y +C + A + F + P++ W +I+ QN L+ +++E PNE+T
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITF 682
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
+L A + L + G Q H +I+ GF V +AL MY+ CG L+ G +F
Sbjct: 683 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV 742
Query: 297 RDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLVDRGWD 355
+ +WN++IS +G G KA+ELF ++ +P+ +F++LLSACSH G +D G
Sbjct: 743 NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLS 802
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNH 415
Y+K M ++F + P EH +VD+L RAGKL EA EFI +W LL C H
Sbjct: 803 YYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYH 862
Query: 416 RNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
+ +G E L E+ +S Y+ L++ Y LG WE+ +R+M++ + K PG S
Sbjct: 863 GDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSV 922
Query: 476 IELKSL 481
I+++ L
Sbjct: 923 IDVRCL 928
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 181/366 (49%), Gaps = 26/366 (7%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGD 112
+H LA++ GL+ S+ NAL+ LYAK +L A F +++ ++W+ ++T +G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 113 SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL-- 170
K+L+ F SM SG T VI+ACS + + G +HG +K G+ + +V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ-IERI 229
+S++ MY+KCG A FE + DV+ +I+ G+ NG FE A + +MQ +++I
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF-NLEVPVGSALSAMYAKCGSLDDGY 288
P+ T+ S+ C L+ +G+ +H ++ + + V +++ MY KCG
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE--GTKPDTVTFVNLLSACSH 346
L+F RD++SWN+MIS SQNG +KA LF +++ E +K T + +L++C
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDS 509
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWR 406
SD +V + L + G L A +E+ L W
Sbjct: 510 --------------SDSLIFGKSVHCW------LQKLGDLTSAFLRLETMSETRDLTSWN 549
Query: 407 ILLGGC 412
++ GC
Sbjct: 550 SVISGC 555
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 217/456 (47%), Gaps = 41/456 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+L+G+A+ G+ +EA + QM+ ++ + + SI S F GR VH ++
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 61 GLLS-IVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ S + V N+++ +Y KCG A F+ + +++ ++W++M++ ++Q+G + KA L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 120 FHSM----HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
F + CS S T++ ++ +C +++ G+ +H + KLG L
Sbjct: 483 FKEVVSEYSCSKFSLS--TVLAILTSCDSSDSLIFGKSVHCWLQKLG---------DLTS 531
Query: 176 MYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL- 234
+ + ++++ R D+ W S+I+G +G +L + M E I ++L
Sbjct: 532 AFLRLETMSETR---------DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
T+ + A +L + QG+ H IK L+ + + L MY +C ++ +F +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
++ SWN +IS LSQN G + +LF + LE P+ +TFV LLSA + +G G
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGM 699
Query: 355 D-YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCR 413
+ ++ F P V A +VD+ S G L + ++ V+ + W ++
Sbjct: 700 QAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISA-- 754
Query: 414 NHRNYDIGAYAGEKLMELGS-----PESSAYVLLSS 444
H + +G A E EL S P S+++ L S
Sbjct: 755 -HGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 175/328 (53%), Gaps = 10/328 (3%)
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEF 91
F+ + S + RTE +T R VH A+K GLL ++ ++ L+T Y + G L + F+
Sbjct: 89 FLRDVLRSFMMRTE-TETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDE 147
Query: 92 SGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEG 151
K+ I W++M+T Q+G A+ LF M G +EF ++ A S L ++
Sbjct: 148 LKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLS 204
Query: 152 RQ---MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
R+ +H +++ G + ++L+++YAK +L+ A F +++ D+V W +I+T
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE- 267
+ NG +L + M + +T + V+ ACSS+ L G+ +H +IK G++ E
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 268 -VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML 326
V VG+++ +MY+KCG + +F + RDVIS NA+++G + NG +A + ++M
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 327 -LEGTKPDTVTFVNLLSACSHMGLVDRG 353
++ +PD T V++ S C + G
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREG 412
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 202/401 (50%), Gaps = 37/401 (9%)
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEY-------------------- 192
Q H KLG+G +L S V Y +C ARR +
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 193 -------------VQQPDVVLWTSIITGYVQNGDFEGALN-LYGKMQIERIIPNELTMAS 238
+V+ W +I GYV+N +E AL L + I PN+ + AS
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
L AC+ L L K +H+ +I G L + SAL +YAKCG + +F+ + D
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
V WNAMI+G + +G +A+ +F +M E PD++TF+ LL+ CSH GL++ G +YF
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG 290
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
+MS F I P +EHY MVD+L RAG++ EA E IES ++ + +WR LL R ++N
Sbjct: 291 LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNP 350
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
++G A + L +S YVLLS+IY++ +WE + VR +M G+ K G SW+E
Sbjct: 351 ELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEF 407
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLD 519
++H F GD+ H + I L L + K +G+ D
Sbjct: 408 GGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTD 448
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 144/279 (51%), Gaps = 8/279 (2%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM-HCSGV 128
N ++ K G A + + ++N ITW+ M+ GY ++ E+AL+ +M + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
P++F+ + AC+ L + + +H + G L + S+LVD+YAKCG + +R
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA 248
F V++ DV +W ++ITG+ +G A+ ++ +M+ E + P+ +T +L CS
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 249 LDQGKQMHAGIIKYGFNLEVPVG--SALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAM 305
L++GK+ + G++ F+++ + A+ + + G + + Y + MP DV+ W ++
Sbjct: 282 LEEGKE-YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 306 ISGLSQNGHGNKAL-ELFDKMLLEGTKPDTVTFVNLLSA 343
+S S + N L E+ + L + D V N+ S+
Sbjct: 341 LS--SSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSS 377
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 4/209 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY +EA++ + M + N+F S L+ R L + VHSL + +
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSIT-WSAMVTGYAQSGDSEKALRL 119
G+ +++ALV +YAKCG + + F +S +N ++ W+AM+TG+A G + +A+R+
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVF-YSVKRNDVSIWNAMITGFATHGLATEAIRV 253
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG-YSLKLGFGLQLYVLSSLVDMYA 178
F M V P T +G++ CS + EG++ G S + +L ++VD+
Sbjct: 254 FSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLG 313
Query: 179 KCGSLADARRGFEYVQ-QPDVVLWTSIIT 206
+ G + +A E + +PDVV+W S+++
Sbjct: 314 RAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 220/413 (53%), Gaps = 9/413 (2%)
Query: 72 LVTLYAKCGSL-------DDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH 124
L TL + C SL D R+ + W+ ++ Y + A++++ M
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 125 CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLA 184
S VLP ++L VI A + G+++H +++LGF + S + +Y K G
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
+AR+ F+ + + W +II G G A+ ++ M+ + P++ TM SV +C
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 245 SLAALDQGKQMHAGII--KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISW 302
L L Q+H ++ K ++ + ++L MY KCG +D IF M R+V+SW
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 303 NAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD 362
++MI G + NG+ +ALE F +M G +P+ +TFV +LSAC H GLV+ G YF MM
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 363 EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGA 422
EF++ P + HY C+VD+LSR G+L EAK+ +E + + +W L+GGC + ++
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 423 YAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
+ ++EL YV+L+++Y G W+DVE VR++MK + VAK P S+
Sbjct: 410 WVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 144/269 (53%), Gaps = 6/269 (2%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G+++HS+A++ G + + +TLY K G ++A + F+ + + +W+A++ G
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL--KLGFGLQL 167
+G + +A+ +F M SG+ P +FT+V V +C L + Q+H L K +
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
+L+SL+DMY KCG + A FE ++Q +VV W+S+I GY NG+ AL + +M+
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG--SALSAMYAKCGSLD 285
+ PN++T VL AC +++GK A ++K F LE + + + ++ G L
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 286 DGYLIFWRMPTR-DVISWNAMISGLSQNG 313
+ + MP + +V+ W ++ G + G
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 117/223 (52%), Gaps = 9/223 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHS--LAM 58
++ G G A EA+E+F M+ E ++F + S+ + L Q+H L
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLE-PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQA 247
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K S + + N+L+ +Y KCG +D A FE +N ++WS+M+ GYA +G++ +AL
Sbjct: 248 KTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALE 307
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ---MHGYSLKLGFGLQLYVLSSLVD 175
F M GV P++ T VGV++AC + EG+ M +L GL Y +VD
Sbjct: 308 CFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY--GCIVD 365
Query: 176 MYAKCGSLADARRGFEYV-QQPDVVLWTSIITGYVQNGDFEGA 217
+ ++ G L +A++ E + +P+V++W ++ G + GD E A
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 217/393 (55%), Gaps = 1/393 (0%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++G A EA+ LF M EE+ N +LT+IL L + L G++VH+ +K+
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 61 -GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
+ V + L+ LY KCG + R F S +N+I+W+A+++GYA +G ++ALR
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M G P T+ V+ C++L AI +G+++H Y+LK F + +++SL+ MY+K
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSK 465
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG R F+ ++Q +V WT++I YV+N D + ++ M + + P+ +TM V
Sbjct: 466 CGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRV 525
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L CS L AL GK++H I+K F V + + MY KCG L F + +
Sbjct: 526 LTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGS 585
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKM 359
++W A+I N A+ F++M+ G P+T TF +LS CS G VD + +F +
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNL 645
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
M +++ P+ EHY+ ++++L+R G++ EA+
Sbjct: 646 MLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 227/444 (51%), Gaps = 10/444 (2%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
++ + F +MR E N + L+++ L G + H+LA+KNGL + V + +
Sbjct: 196 QDVLSTFTEMR-ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTS 254
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC-SGVLP 130
LV +Y KCG + A R F+ ++ + W AM+ G A + +AL LF +M + P
Sbjct: 255 LVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYP 314
Query: 131 SEFTLVGVINACSDLCAIVEGRQMHGYSLK-LGFGLQLYVLSSLVDMYAKCGSLADARRG 189
+ L ++ D+ A+ G+++H + LK + Q +V S L+D+Y KCG +A RR
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F +Q + + WT++++GY NG F+ AL MQ E P+ +T+A+VL C+ L A+
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
QGK++H +K F V + ++L MY+KCG + +F R+ R+V +W AMI
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKMMSDEFDITP 368
+N +E+F MLL +PD+VT +L+ CS + + G + + ++ EF+ P
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 369 TVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLG-GCRNHRNYDIGAYAGEK 427
V A ++ + + G L A ++ V L I+ GC I + E+
Sbjct: 555 FVS--ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCF--EQ 610
Query: 428 LMELG-SPESSAYVLLSSIYTALG 450
++ G +P + + + SI + G
Sbjct: 611 MVSRGFTPNTFTFTAVLSICSQAG 634
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 4/328 (1%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
N +++L R + L G+QVH NGL S + LV +Y CGS+ DA + F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 90 EFSGNKNSITWSAMVTGYAQSGDS--EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCA 147
+ S + N +W+A++ G SG + L F M GV + ++L V + + A
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 148 IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITG 207
+ +G + H ++K G +++ +SLVDMY KCG + ARR F+ + + D+V+W ++I G
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 208 YVQNGDFEGALNLYGKM-QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
N AL L+ M E+I PN + + ++L + AL GK++HA ++K +
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 267 EVP-VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
E P V S L +Y KCG + G +F+ R+ ISW A++SG + NG ++AL M
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRG 353
EG +PD VT +L C+ + + +G
Sbjct: 410 QQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 158/331 (47%), Gaps = 8/331 (2%)
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ 153
+KN + +A+ + E AL + + G+ + T ++ AC +++ G+Q
Sbjct: 73 SKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQ 132
Query: 154 MHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
+H + G ++ + LV MY CGS+ DA++ F+ +V W +++ G V +G
Sbjct: 133 VHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGK 192
Query: 214 --FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
++ L+ + +M+ + N ++++V K+ + +AL QG + HA IK G V +
Sbjct: 193 KRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK 252
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLL-EGT 330
++L MY KCG + +F + RD++ W AMI+GL+ N +AL LF M+ E
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFK--MMSDEFDITPTVEHYACMVDILSRAGKLNE 388
P++V +L + + G + + S + P V ++ ++D+ + G +
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV--HSGLIDLYCKCGDMAS 370
Query: 389 AKEFIESAEVDHGLCLWRILLGGCRNHRNYD 419
+ ++ + + W L+ G + +D
Sbjct: 371 GRRVFYGSKQRNAIS-WTALMSGYAANGRFD 400
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 241/467 (51%), Gaps = 26/467 (5%)
Query: 80 GSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH---------CS-GVL 129
G L A++ F + + W+A++ G+A S A + SM C L
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
FTL AC+ Q+H + G + ++L+D Y+K G L A +
Sbjct: 111 TCSFTL----KACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F+ + DV W ++I G V A+ LY +M+ E I +E+T+ + L ACS L +
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP-TRDVISWNAMISG 308
+G+ + G N V V +A MY+KCG +D Y +F + + V++WN MI+G
Sbjct: 227 KEGENIFHGYS----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 309 LSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITP 368
+ +G ++ALE+FDK+ G KPD V+++ L+AC H GLV+ G F M+ + +
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVER 341
Query: 369 TVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKL 428
++HY C+VD+LSRAG+L EA + I S + LW+ LLG + + ++ A ++
Sbjct: 342 NMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREI 401
Query: 429 MELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVG 488
E+G +VLLS++Y A G+W+DV VR M+++ V K PG S+IE K +H F
Sbjct: 402 KEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNS 461
Query: 489 DSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQE 535
D H Q EI ++ + ++++GY + ++ D+G++E
Sbjct: 462 DKSHEQWREIYEKIDEIRFKIREDGY------VAQTGLVLHDIGEEE 502
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 18/217 (8%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
Q+H + GL + + L+ Y+K G L A + F+ ++ +W+A++ G
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM-HGYSLKLGFGLQLYVL 170
+ +A+ L+ M G+ SE T+V + ACS L + EG + HGYS + V
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVS 244
Query: 171 SSLVDMYAKCGSLADARRGFE-YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
++ +DMY+KCG + A + FE + + VV W ++ITG+ +G+ AL ++ K++ I
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
P++++ + L AC HAG+++YG ++
Sbjct: 305 KPDDVSYLAALTACR-----------HAGLVEYGLSV 330
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 255/487 (52%), Gaps = 7/487 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SG S G + I +F M+ E EF SIL+ L + G Q+H A+ +
Sbjct: 107 MISGLVSCGFHEYGIRVFFDMQ-RWEIRPTEFTF-SILASL--VTCVRHGEQIHGNAICS 162
Query: 61 GLLSI-VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G+ + V N+++ +Y + G D AL F +++ ++W+ ++ + SG+ E AL
Sbjct: 163 GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQ 222
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F M + P E+T+ V++ CSDL + +G+Q +K+GF VL + +DM++K
Sbjct: 223 FWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSK 282
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
C L D+ + F +++ D VL S+I Y + E AL L+ + + P++ T +SV
Sbjct: 283 CNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSV 342
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L + +++ LD G +H+ +IK GF+L+ V ++L MY K GS+D +F + +D+
Sbjct: 343 LSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDL 401
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLL-EGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
I WN +I GL++N ++L +F+++L+ + KPD VT + +L AC + G V+ G F
Sbjct: 402 IFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS 461
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M + P EHYAC++++L R G +NEAK+ + + +W +L + +
Sbjct: 462 SMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDT 521
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+ + ++E S Y++L IY +WE+ +R M + G S I +
Sbjct: 522 RLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISI 581
Query: 479 KSLVHVF 485
+S V F
Sbjct: 582 ESSVFSF 588
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 205/460 (44%), Gaps = 47/460 (10%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWS-------- 101
+ VH+ ++ G + N + LY K GS+ +AL+ F+ +KN+ITW+
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 102 -----------------------AMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGV 138
M++G G E +R+F M + P+EFT +
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 139 INACSDLCAIVEGRQMHGYSLKLGFG-LQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
S + + G Q+HG ++ G L V +S++DMY + G A F ++ D
Sbjct: 143 ---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
VV W +I +G+ E AL+ + M+ I P+E T++ V+ CS L L +GKQ A
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNK 317
IK GF V A M++KC LDD +F + D + N+MI S + G
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD-EFDITPTVEHYACM 376
AL LF + + +PD TF ++LS+ + + ++D G D ++ FD+ V +
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVA--TSL 376
Query: 377 VDILSRAGKLNEAKEFIESAEVDHGLCLWR-ILLGGCRNHRNYDIGAYAGEKLMELG-SP 434
+++ + G ++ A + L W +++G RN R + A + LM P
Sbjct: 377 MEMYFKTGSVDLAMGVFAKTD-GKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKP 435
Query: 435 ESSAY--VLLSSIYTALGQWEDVELVRRMMKARGVAKEPG 472
+ +L++ Y E +++ M KA GV PG
Sbjct: 436 DRVTLMGILVACCYAGFVN-EGIQIFSSMEKAHGV--NPG 472
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 211/416 (50%), Gaps = 34/416 (8%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGV-INACSDLCAIVEGRQMHG 156
I+ + ++ YA G+ E+AL LF MH S LP + + + + +C+ V G +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 157 YSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEG 216
+S+K F +V +L+DMY KC S++ AR+ F+ + Q + V+W ++I+ Y G +
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 217 ALNLYGKMQIE---------------------------------RIIPNELTMASVLKAC 243
A+ LY M + R PN +T+ +++ AC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 244 SSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWN 303
S++ A K++H+ + + S L Y +CGS+ L+F M RDV++W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 304 AMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
++IS + +G AL+ F +M L PD + F+N+L ACSH GL D YFK M +
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 364 FDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAY 423
+ + + +HY+C+VD+LSR G+ EA + I++ W LLG CRN+ ++
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 424 AGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELK 479
A +L+ + + YVLL IY ++G+ E+ E +R MK GV PG SW K
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCLFK 428
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 161/353 (45%), Gaps = 47/353 (13%)
Query: 2 LSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNG 61
LS YA+ G ++A+ LF QM + V + L G VH+ ++K+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 62 LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFH 121
LS V AL+ +Y KC S+ A + F+ +N++ W+AM++ Y G ++A+ L+
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 122 SMHCSGVLPSE------------------------------------FTLVGVINACSDL 145
+M V+P+E TL+ +++ACS +
Sbjct: 139 AM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSII 205
A +++H Y+ + + S LV+ Y +CGS+ + F+ ++ DVV W+S+I
Sbjct: 196 GAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLI 255
Query: 206 TGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQG----KQMHAGIIK 261
+ Y +GD E AL + +M++ ++ P+++ +VLKACS D+ K+M
Sbjct: 256 SAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---D 312
Query: 262 YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI-SWNAMISGLSQNG 313
YG S L + ++ G ++ Y + MP + +W A++ G
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 54/275 (19%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGE------------------------------- 29
M+S Y G KEA+EL+E M E
Sbjct: 120 MISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFK 179
Query: 30 -NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRT 88
N L +++S + +++HS A +N + + + LV Y +CGS+
Sbjct: 180 PNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLV 239
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC-- 146
F+ +++ + WS++++ YA GD+E AL+ F M + V P + + V+ ACS
Sbjct: 240 FDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLA 299
Query: 147 --AIVEGRQMHGYSLKLGFGLQLYV--LSSLVDMYAKCGSLADARRGFEYV-QQPDVVLW 201
A+V ++M G +GL+ S LVD+ ++ G +A + + + ++P W
Sbjct: 300 DEALVYFKRMQG-----DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTW 354
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
+++ GA YG++++ I EL M
Sbjct: 355 GALL----------GACRNYGEIELAEIAARELLM 379
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 254/486 (52%), Gaps = 9/486 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
+L + G +K E++ +M E EG +N ++ + + G+Q+HSL +
Sbjct: 184 LLRCFCQTGESKRLFEVYLRM---ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 59 KNGL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKAL 117
K+G +S + VAN LV Y+ CG L ++R+F K+ I+W+++V+ A G +L
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSL 300
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ-LYVLSSLVDM 176
LF M G PS + +N CS I G+Q+H Y LK+GF + L+V S+L+DM
Sbjct: 301 DLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM 360
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
Y KC + ++ ++ + ++ S++T + G + + ++G M E +E+T+
Sbjct: 361 YGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTL 420
Query: 237 ASVLKACS-SLA-ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
++VLKA S SL +L +H IK G+ +V V +L Y K G + +F +
Sbjct: 421 STVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDEL 480
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
T ++ ++I+G ++NG G +++ +M PD VT +++LS CSH GLV+ G
Sbjct: 481 DTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGE 540
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
F + ++ I+P + YACMVD+L RAG + +A+ + A D W LL CR
Sbjct: 541 LIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRI 600
Query: 415 HRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
HRN IG A E LM L + Y+ +S Y +G +E +R + +R + +E G S
Sbjct: 601 HRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYS 660
Query: 475 WIELKS 480
+ +K+
Sbjct: 661 SVVVKN 666
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 206/430 (47%), Gaps = 30/430 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQM-RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
++SG + G + AIEL+ +M C E + F S+LS + F G QVH +
Sbjct: 83 LISGNSRYGCSLRAIELYAEMVSCGLRESASTF--PSVLSVCSDELFCREGIQVHCRVIS 140
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
G + V +ALV LYA +D AL+ F+ ++N + ++ + Q+G+S++ +
Sbjct: 141 LGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEV 200
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL-QLYVLSSLVDMYA 178
+ M GV + T +I CS + EG+Q+H +K G+ + ++V + LVD Y+
Sbjct: 201 YLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYS 260
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
CG L+ + R F V + DV+ W SI++ G +L+L+ KMQ P+ S
Sbjct: 261 ACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMS 320
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNL-EVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
L CS + + GKQ+H ++K GF++ + V SAL MY KC +++ L++ +P
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCL 380
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS------------ 345
++ N++++ L G +E+F M+ EGT D VT +L A S
Sbjct: 381 NLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTL 440
Query: 346 -HMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCL 404
H + G+ V ++D +++G+ +++ + + + CL
Sbjct: 441 VHCCAIKSGY------------AADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCL 488
Query: 405 WRILLGGCRN 414
I+ G RN
Sbjct: 489 TSIINGYARN 498
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 162/312 (51%), Gaps = 3/312 (0%)
Query: 44 TEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAM 103
T F+ T R S ++ +V N + K G+L A F+ ++ +T++ +
Sbjct: 24 TPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLL 83
Query: 104 VTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF 163
++G ++ G S +A+ L+ M G+ S T V++ CSD EG Q+H + LGF
Sbjct: 84 ISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGF 143
Query: 164 GLQLYVLSSLVDMYAKCGSLAD-ARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
G ++V S+LV +YA C L D A + F+ + ++ + ++ + Q G+ + +Y
Sbjct: 144 GCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYL 202
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL-EVPVGSALSAMYAKC 281
+M++E + N LT +++ CS + +GKQ+H+ ++K G+N+ + V + L Y+ C
Sbjct: 203 RMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC 262
Query: 282 GSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLL 341
G L F +P +DVISWN+++S + G +L+LF KM G +P F++ L
Sbjct: 263 GDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFL 322
Query: 342 SACSHMGLVDRG 353
+ CS + G
Sbjct: 323 NFCSRNSDIQSG 334
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 262/514 (50%), Gaps = 46/514 (8%)
Query: 26 EEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYA-KCGSLDD 84
E+ N+F+ I +++ L+ +QV S + +GL + L+ + +L
Sbjct: 20 EQLLNQFISAVI----SKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSY 75
Query: 85 ALRTFEFSGNKNSITWSAMVTGYAQSGD--SEKALRLFHSMHCSGV-LPSEFTLVGVINA 141
A F+ N+ ++A++T Y+ S + A F M V P+ F V+ +
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 142 CSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS-LADARRGFEYVQQPDVVL 200
L + +H + K GF L + V ++L+ YA S + AR+ F+ + + +VV
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 201 WTSIITGYVQNGDFEGALNLYGKMQ--------------------------IERII---- 230
WT++++GY ++GD A+ L+ M R+I
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 231 --PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
PNE+T+ VL AC+ L K +HA + + +V V ++L +Y KCG+L++
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 289 LIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKML---LEGTKPDTVTFVNLLSACS 345
+F + + +WN+MI+ + +G +A+ +F++M+ + KPD +TF+ LL+AC+
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 346 HMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLW 405
H GLV +G YF +M++ F I P +EHY C++D+L RAG+ +EA E + + ++ +W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 406 RILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYV-LLSSIYTALGQWEDVELVRRMMKA 464
LL C+ H + D+ A + L+ L +P + YV +++++Y +G WE+ R+M+K
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVAL-NPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 465 RGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEI 498
+ K PG S IE+ + VH F D HP+ +EI
Sbjct: 495 QNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEI 528
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 157/357 (43%), Gaps = 46/357 (12%)
Query: 1 MLSGYAS-LGL-AKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQ---VHS 55
+L+ Y+S L L A A F M N F+ +L T +L + VH+
Sbjct: 94 VLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS---TPYLSSAFSTPLVHT 150
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGS-LDDALRTFEFSGNKNSITWSAMVTGYAQSGDSE 114
K+G V V AL+ YA S + A + F+ +N ++W+AM++GYA+SGD
Sbjct: 151 HLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 115 KALRLFHSMH-------------CS-------------------GVLPSEFTLVGVINAC 142
A+ LF M C+ + P+E T+V V++AC
Sbjct: 211 NAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSAC 270
Query: 143 SDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWT 202
+ + + +H ++ + ++V +SLVD+Y KCG+L +A F+ + + W
Sbjct: 271 AQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWN 330
Query: 203 SIITGYVQNGDFEGALNLYG---KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGI 259
S+I + +G E A+ ++ K+ I I P+ +T +L AC+ + +G+ +
Sbjct: 331 SMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLM 390
Query: 260 I-KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGH 314
++G + L + + G D+ + M + D W ++++ +GH
Sbjct: 391 TNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSV 68
GL EA+ LF +M E NE + +LS +T L + +H+ A + L S V V
Sbjct: 238 GLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFV 297
Query: 69 ANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM---HC 125
+N+LV LY KCG+L++A F+ + K+ W++M+ +A G SE+A+ +F M +
Sbjct: 298 SNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGY----SLKLGFGLQLYVLSSLVDMYAKCG 181
+ + P T +G++NAC+ + +GR GY + + G ++ L+D+ + G
Sbjct: 358 NDIKPDHITFIGLLNACTHGGLVSKGR---GYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Query: 182 SLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGA 217
+A ++ + D +W S++ +G + A
Sbjct: 415 RFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 218/433 (50%), Gaps = 40/433 (9%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
+A++LF M E N+ S+L + + L GRQ+H + +KNG + + + NAL
Sbjct: 299 KALKLFVSMP-EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNAL 357
Query: 73 VTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSE 132
+ YAKCG+L+D+ F++ +KN + W+A+++GYA D L LF M G P+E
Sbjct: 358 IDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPTE 416
Query: 133 FTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADA------ 186
+T + +C + E +Q+H +++G+ YVLSSL+ YAK + DA
Sbjct: 417 YTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 187 ------------------RRG--------FEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
RRG ++QPD V W I ++ E + L
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 221 YGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL-EVPVGSALSAMYA 279
+ M I P++ T S+L CS L L G +H I K F+ + V + L MY
Sbjct: 533 FKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYG 592
Query: 280 KCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVN 339
KCGS+ +F +++I+W A+IS L +G+G +ALE F + L G KPD V+F++
Sbjct: 593 KCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFIS 652
Query: 340 LLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVD 399
+L+AC H G+V G F+ M D + + P ++HY C VD+L+R G L EA+ I
Sbjct: 653 ILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFP 711
Query: 400 HGLCLWRILLGGC 412
+WR L GC
Sbjct: 712 ADAPVWRTFLDGC 724
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 238/488 (48%), Gaps = 57/488 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQM-RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK 59
M+S G KE + F ++ R E+ F+ +L ++ + LD +Q+H A K
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFL--GVLKGVSCVKDLDISKQLHCSATK 243
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL +SV N+L++ Y KCG+ A R F+ +G+ + ++W+A++ A+S + KAL+L
Sbjct: 244 KGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKL 303
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F SM G P++ T V V+ S + + GRQ+HG +K G + + ++L+D YAK
Sbjct: 304 FVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK 363
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG+L D+R F+Y++ ++V W ++++GY N D L+L+ +M P E T ++
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF-WRM-PTR 297
LK+C + + +Q+H+ I++ G+ V S+L YAK ++D L+ W PT
Sbjct: 423 LKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 298 ------------------------------DVISWNAMISGLSQNGHGNKALELFDKMLL 327
D +SWN I+ S++ + + +ELF ML
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD-EFDITPTVEHYAC--MVDILSRAG 384
+PD TFV++LS CS + + G +++ +F T + C ++D+ + G
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT---FVCNVLIDMYGKCG 595
Query: 385 KLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS----PESSAYV 440
+ + E + L W L+ C Y G A EK E S P+ +++
Sbjct: 596 SIRSVMKVFEETR-EKNLITWTALI-SCLGIHGY--GQEALEKFKETLSLGFKPDRVSFI 651
Query: 441 LLSSIYTA 448
SI TA
Sbjct: 652 ---SILTA 656
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 33/440 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY+ G +A +F +MR N+ ++ +LS + + G Q+H L++K
Sbjct: 86 IIKGYSKYGDVDKAWGVFSEMR-YFGYLPNQSTVSGLLSCASLD--VRAGTQLHGLSLKY 142
Query: 61 GL-LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRL 119
GL ++ V L+ LY + L+ A + FE K+ TW+ M++ G ++ +
Sbjct: 143 GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 120 FHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
F + G +E + +GV+ S + + +Q+H + K G ++ V++SL+ Y K
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 180 CGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
CG+ A R F+ D+V W +II ++ + AL L+ M PN+ T SV
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV 299
L S + L G+Q+H +IK G + +G+AL YAKCG+L+D L F + +++
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 300 ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACS-------HMGLVDR 352
+ WNA++SG + N G L LF +ML G +P TF L +C H +V
Sbjct: 383 VCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRM 441
Query: 353 GW---DYF-----------KMMSDEFDIT-----PT-VEHYACMVDILSRAGKLNEAKEF 392
G+ DY ++M+D + PT V + I SR G+ +E+ +
Sbjct: 442 GYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKL 501
Query: 393 IESAEVDHGLCLWRILLGGC 412
I + E + W I + C
Sbjct: 502 ISTLEQPDTVS-WNIAIAAC 520
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 195/397 (49%), Gaps = 8/397 (2%)
Query: 21 MRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMK--NGLLSIVSVANALVTLYAK 78
+ C + N+ V+ S+L+ + + +H+L++ + LL V V N +++LY K
Sbjct: 3 LSCGDLANHNDRVV-SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEK 61
Query: 79 CGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGV 138
G + A + F+ +N ++++ ++ GY++ GD +KA +F M G LP++ T+ G+
Sbjct: 62 LGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGL 121
Query: 139 INACSDLCAIVEGRQMHGYSLKLG-FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
+ +C+ L + G Q+HG SLK G F +V + L+ +Y + L A + FE +
Sbjct: 122 L-SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS 179
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
+ W +++ G + + + ++ E + VLK S + LD KQ+H
Sbjct: 180 LETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHC 239
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNK 317
K G + E+ V ++L + Y KCG+ +F + D++SWNA+I +++ + K
Sbjct: 240 SATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLK 299
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
AL+LF M G P+ T+V++L S + L+ G M+ T V A ++
Sbjct: 300 ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA-LI 358
Query: 378 DILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
D ++ G L +++ + D + W LL G N
Sbjct: 359 DFYAKCGNLEDSRLCFDYIR-DKNIVCWNALLSGYAN 394
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
Query: 29 ENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRT 88
+N++VL+S++ + + ++ + L +G S+V + N + +Y++ G ++++
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLL--LDWASGPTSVVPL-NIVAGIYSRRGQYHESVKL 501
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAI 148
++++W+ + ++S E+ + LF M S + P ++T V +++ CS LC +
Sbjct: 502 ISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDL 561
Query: 149 VEGRQMHGYSLKLGFGL-QLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITG 207
G +HG K F +V + L+DMY KCGS+ + FE ++ +++ WT++I+
Sbjct: 562 TLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISC 621
Query: 208 YVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
+G + AL + + P+ ++ S+L AC + +G + + YG E
Sbjct: 622 LGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPE 681
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMP-TRDVISWNAMISGLSQ 311
+ + A+ G L + + MP D W + G ++
Sbjct: 682 MDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGL-LSIVSVAN 70
+E IELF+ M + +++ SILS ++ L G +H L K + V N
Sbjct: 527 EEVIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCN 585
Query: 71 ALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLP 130
L+ +Y KCGS+ ++ FE + KN ITW+A+++ G ++AL F G P
Sbjct: 586 VLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKP 645
Query: 131 SEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF 190
+ + ++ AC + EG + G ++ VD+ A+ G L +A
Sbjct: 646 DRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLI 705
Query: 191 EYVQQP-DVVLWTSIITG 207
+ P D +W + + G
Sbjct: 706 REMPFPADAPVWRTFLDG 723
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 234/436 (53%), Gaps = 17/436 (3%)
Query: 88 TFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF-HSMHCSGVLPSEFTLVGVINACS-DL 145
+F + S+ + + Y +SG+ KAL F H S F+++ I S
Sbjct: 19 SFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQK 78
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF-EYVQQPDVVLWTSI 204
+ ++GRQ+H KLGF + + +SLV Y+ G + AR+ F E ++ ++VLWT++
Sbjct: 79 ASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAM 138
Query: 205 ITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGF 264
I+ Y +N + A+ L+ +M+ E+I + + + L AC+ L A+ G+++++ IK
Sbjct: 139 ISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKR 198
Query: 265 NL--EVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELF 322
L ++ + ++L MY K G + +F +DV ++ +MI G + NG ++LELF
Sbjct: 199 RLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELF 258
Query: 323 DKM-LLEGTK-----PDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACM 376
KM ++ ++ P+ VTF+ +L ACSH GLV+ G +FK M ++++ P H+ CM
Sbjct: 259 KKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318
Query: 377 VDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPES 436
VD+ R+G L +A EFI + +WR LLG C H N ++G ++ EL
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Query: 437 SAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVG-DSMHPQI 495
YV LS+IY + G W++ +R ++ R + PG SWIEL S+++ FV G D+ Q+
Sbjct: 379 GDYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSGPDNNDEQL 435
Query: 496 --DEIRSELRLLTKLM 509
EI LR L M
Sbjct: 436 MMGEISEVLRCLVSCM 451
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 163/328 (49%), Gaps = 22/328 (6%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSIT-WSAMVTGYA 108
GRQ+H+L K G +++ + +LV Y+ G +D A + F+ + K +I W+AM++ Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG--FGLQ 166
++ +S +A+ LF M + + ++AC+DL A+ G +++ S+K +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 167 LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM-- 224
L + +SL++MY K G AR+ F+ + DV +TS+I GY NG + +L L+ KM
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 225 ----QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM--- 277
Q I PN++T VL ACS +++GK+ +I +NL+ P + M
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMI-MDYNLK-PREAHFGCMVDL 321
Query: 278 YAKCGSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKAL-ELFDKMLLEGTKPDTV 335
+ + G L D + +MP + + + W ++ S HGN L E + + E +
Sbjct: 322 FCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSL--HGNVELGEEVQRRIFELDRDHVG 379
Query: 336 TFVNLLSACSHMGLVDRGWDYFKMMSDE 363
+V L + + G+ WD M D
Sbjct: 380 DYVALSNIYASKGM----WDEKSKMRDR 403
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 127/240 (52%), Gaps = 29/240 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+S Y + EAIELF++M E+ E + ++T LS + G +++S ++K
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDG-VIVTVALSACADLGAVQMGEEIYSRSIKR 196
Query: 61 G--LLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
L +++ N+L+ +Y K G + A + F+ S K+ T+++M+ GYA +G ++++L
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLE 256
Query: 119 LFHSMHC------SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV--L 170
LF M + + P++ T +GV+ ACS + EG++ H S+ + + L+
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHF 315
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
+VD++ + G L DA E++ Q P+ V+W +++ GA +L+G +++
Sbjct: 316 GCMVDLFCRSGHLKDAH---EFINQMPIKPNTVIWRTLL----------GACSLHGNVEL 362
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 236/459 (51%), Gaps = 39/459 (8%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQ 109
G+ +HS ++K G+ S V V ++L+++Y KCG + A + F+ +N TW+AM+ GY
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 110 SGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM-----------HGYS 158
+GD+ A LF + V + T + +I I + R++ +S
Sbjct: 125 NGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS 181
Query: 159 LKLGFGLQ------------------LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVL 200
+ LG + +V S ++ Y + G + +AR F V D+V+
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 201 WTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII 260
W ++I GY QNG + A++ + MQ E P+ +T++S+L AC+ LD G+++H+ I
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 261 KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALE 320
G L V +AL MYAKCG L++ +F + R V N+MIS L+ +G G +ALE
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 321 LFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDIL 380
+F M KPD +TF+ +L+AC H G + G F M + D+ P V+H+ C++ +L
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLL 420
Query: 381 SRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAY- 439
R+GKL EA ++ V + LLG C+ H + ++ A K++E +++Y
Sbjct: 421 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEM-AEQVMKIIETAGSITNSYS 479
Query: 440 ----VLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
+S++Y +W+ E +R M+ RG+ K PG S
Sbjct: 480 ENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 39/335 (11%)
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGV-LPSEFTLVGVINACSDLCA-IVEGRQMHGYS 158
S ++ + G +AL L+ + GV P L+ + AC+ + +V G+ +H S
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI--LRACACVVPRVVLGKLLHSES 72
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGAL 218
+K G + V SSL+ MY KCG + AR+ F+ + + +V W ++I GY+ NGD A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 219 NLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM-----------HAGIIKYG---- 263
L+ ++ + R N +T ++K +++ +++ A + G
Sbjct: 133 GLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVN 189
Query: 264 ---------FNLEVP-----VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
F ++P V S + + Y + G + + IF+R+ RD++ WN +I+G
Sbjct: 190 NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGY 249
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE-FDITP 368
+QNG+ + A++ F M EG +PD VT ++LSAC+ G +D G + +++ ++
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQ 309
Query: 369 TVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC 403
V + ++D+ ++ G L A ES V C
Sbjct: 310 FVSN--ALIDMYAKCGDLENATSVFESISVRSVAC 342
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GYA G + +AI+ F M+ E E + ++SILS ++ LD GR+VHSL
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYE-PDAVTVSSILSACAQSGRLDVGREVHSLINHR 303
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G+ V+NAL+ +YAKCG L++A FE ++ ++M++ A G ++AL +F
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+M + P E T + V+ AC ++EG ++ + L+ + +
Sbjct: 364 STMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRS 423
Query: 181 GSLADARRGFE--YVQQPDVVL 200
G L +A R + +V+ D VL
Sbjct: 424 GKLKEAYRLVKEMHVKPNDTVL 445
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 109/212 (51%), Gaps = 11/212 (5%)
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERI-IPNELTMASVLKACSSLAA-LDQGKQMHAGI 259
+++I ++ G AL LYG ++ + P + + +L+AC+ + + GK +H+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSES 72
Query: 260 IKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKAL 319
IK+G +V VGS+L +MY KCG + +F MP R+V +WNAMI G NG A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 320 ELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDI 379
LF+++ +TVT++ ++ +++ + F+ M E V+ ++ M+ +
Sbjct: 133 GLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK---NVKAWSVMLGV 186
Query: 380 LSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
K+ +A++F E + +W +++ G
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAF-VWSLMMSG 217
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 244/470 (51%), Gaps = 28/470 (5%)
Query: 34 LTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSG 93
+TS+L + E + G+ +H+ A+KNGL V V LV LY++ G ++ A + F+
Sbjct: 107 VTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIA 166
Query: 94 NKNSITWSAMVTGYAQSGDSEKALRLFHSMH-----CSGVLPSEFTLVGVI-NACSDLCA 147
KN+++W++++ GY +SG+ ++A R+F + ++ S + G + NACS A
Sbjct: 167 EKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSA 226
Query: 148 I---------------VEGRQMHGYSLKLGFGLQLYVLS--SLVDMYAKCGSLADARRGF 190
+ V R+M Q +S +++ Y K G + A F
Sbjct: 227 MPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 191 EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER---IIPNELTMASVLKACSSLA 247
+ + D +++ ++I Y QNG + AL L+ +M +ER I P+E+T++SV+ A S L
Sbjct: 287 RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM-LERNSYIQPDEITLSSVVSANSQLG 345
Query: 248 ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
G + + I ++G ++ + ++L +Y K G + +F + +D +S++AMI
Sbjct: 346 NTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIM 405
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
G NG +A LF M+ + P+ VTF LLSA SH GLV G+ F M D ++
Sbjct: 406 GCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH-NLE 464
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEK 427
P+ +HY MVD+L RAG+L EA E I+S + +W LL H N + G A
Sbjct: 465 PSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSH 524
Query: 428 LMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIE 477
++L + + L+ IY+++G+W+D VR +K + + K GCSW+E
Sbjct: 525 CVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 145/283 (51%), Gaps = 26/283 (9%)
Query: 91 FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVE 150
F+G+ +S +W +V +Q ++ + ++ MH SG+ PS + V+ AC + +V+
Sbjct: 64 FNGH-DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVD 122
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQ 210
G+ +H +LK G +YV + LV +Y++ G + A++ F+ + + + V W S++ GY++
Sbjct: 123 GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLE 182
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLK------ACSSLAALDQGKQMHAGIIKYGF 264
+G+ + A ++ K+ + + L ++S K ACS +A+ I+ G+
Sbjct: 183 SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGY 242
Query: 265 -NLE-----------VPVGSALSAM-----YAKCGSLDDGYLIFWRMPTRDVISWNAMIS 307
N +P + +S + Y K G + +F M +D + ++AMI+
Sbjct: 243 VNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIA 302
Query: 308 GLSQNGHGNKALELFDKMLLEGT--KPDTVTFVNLLSACSHMG 348
+QNG AL+LF +ML + +PD +T +++SA S +G
Sbjct: 303 CYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 61/262 (23%)
Query: 1 MLSGYASLGLAKEAIELFEQMR------------CEEEEGE------------------- 29
M+SGY LG + A ELF M C + G+
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 30 -NEFVLTSIL---SDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDA 85
+E L+S++ S L T F G V S ++G+ ++ +L+ LY K G A
Sbjct: 329 PDEITLSSVVSANSQLGNTSF---GTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKA 385
Query: 86 LRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDL 145
+ F K+++++SAM+ G +G + +A LF +M + P+ T G+++A S
Sbjct: 386 FKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHS 445
Query: 146 CAIVEGRQ----MHGYSLKLG---FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ---- 194
+ EG + M ++L+ +G+ +VDM + G L +A +E ++
Sbjct: 446 GLVQEGYKCFNSMKDHNLEPSADHYGI-------MVDMLGRAGRLEEA---YELIKSMPM 495
Query: 195 QPDVVLWTSII--TGYVQNGDF 214
QP+ +W +++ +G N +F
Sbjct: 496 QPNAGVWGALLLASGLHNNVEF 517
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 243/500 (48%), Gaps = 42/500 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQV--HSLAM 58
M++G+ G A+ LF +M ++ L ++++ L + E L V ++
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSP-----LCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTF-------------EFSGN--KNSITWSAM 103
+G +V N L+ Y + G ++ A F EF KN ++W++M
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 104 VTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS-----DLCAIVEGRQMHGYS 158
+ Y + GD A LF M + + G ++ L + + R H ++
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN 347
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGAL 218
+ +V YA G++ AR FE + V W SII Y +N D++ A+
Sbjct: 348 M-------------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAV 394
Query: 219 NLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMY 278
+L+ +M IE P+ T+ S+L A + L L G QMH ++K +VPV +AL MY
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMY 453
Query: 279 AKCGSLDDGYLIFWRMP-TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
++CG + + IF M R+VI+WNAMI G + +G+ ++AL LF M G P +TF
Sbjct: 454 SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
V++L+AC+H GLVD F M + I P +EHY+ +V++ S G+ EA I S
Sbjct: 514 VSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
Query: 398 VDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVEL 457
+ +W LL CR + N + A E + L S+ YVLL ++Y +G W++
Sbjct: 574 FEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQ 633
Query: 458 VRRMMKARGVAKEPGCSWIE 477
VR M+++ + KE G SW++
Sbjct: 634 VRMNMESKRIKKERGSSWVD 653
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 205/462 (44%), Gaps = 59/462 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY +A +LF+ M + N + S FL+ R++
Sbjct: 77 MISGYVKRREMNQARKLFDVMPKRDVVTWNTMI--SGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
S N +++ YAK + +AL FE +N+++WSAM+TG+ Q+G+ + A+ LF
Sbjct: 135 DSFSW----NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLF 190
Query: 121 HSMHCSGVLPSEFTLVGVI-NACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
M P + G+I N A V G+ +G SL G +Y ++L+ Y +
Sbjct: 191 RKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ--YG-SLVSGREDLVYAYNTLIVGYGQ 247
Query: 180 CGSLADARRGFEYVQQPD-----------------VVLWTSIITGYVQNGDFEGALNLYG 222
G + AR F+ Q PD VV W S+I Y++ GD A L+
Sbjct: 248 RGQVEAARCLFD--QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL--EVPVGSALS----- 275
+M+ I S + G +H ++ F L E+P A S
Sbjct: 306 QMKDRDTI--------------SWNTMIDG-YVHVSRMEDAFALFSEMPNRDAHSWNMMV 350
Query: 276 AMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTV 335
+ YA G+++ F + P + +SWN++I+ +N +A++LF +M +EG KPD
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 336 TFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
T +LLSA + + + G +++ + P V + ++ + SR G++ E++ +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVK--TVIPDVPVHNALITMYSRCGEIMESRRIFDE 468
Query: 396 AEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESS 437
++ + W ++GG H N A E L GS +S+
Sbjct: 469 MKLKREVITWNAMIGGYAFHGN------ASEALNLFGSMKSN 504
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 154/356 (43%), Gaps = 32/356 (8%)
Query: 78 KCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVG 137
+ G + +A FE +N++TW+ M++GY + + +A +LF M V+ + G
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 138 VINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD 197
+ +C + + E R++ + ++++ YAK + +A FE + + +
Sbjct: 112 YV-SCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK---------ACSSLAA 248
V W+++ITG+ QNG+ + A+ L+ KM ++ P +A ++K +
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 249 LDQGKQ-----MHAGIIKYGFNLEVPVGSALSAMYAK-CGSLDDGYLIFWRMPTRDVISW 302
L G++ + I+ YG +V L CG DD F ++V+SW
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG--DDHGGEFRERFCKNVVSW 284
Query: 303 NAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD 362
N+MI + G A LFD+M DT+++ ++ H+ ++ + F M +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 363 EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
+ MV + G + A+ + E H + W ++ +++Y
Sbjct: 341 R-----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-WNSIIAAYEKNKDY 390
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 204/422 (48%), Gaps = 34/422 (8%)
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
+ + Y S ++AL + + G +P +T V +I+ C + G+ HG ++K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 161 LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
G L V +SL+ MY CG+L A++ F + + D+V W SII G V+NGD A L
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 221 YGKMQIERIIP-------------------------------NELTMASVLKACSSLAAL 249
+ +M + II NE T+ +L AC A L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
+G+ +HA +I+ N V + +AL MY KC + IF + R+ ++WN MI
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
+G LELF+ M+ +PD VTFV +L C+ GLV +G Y+ +M DEF I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 370 VEHYACMVDILSRAGKLNEAKEFIES---AEVDHGLCLWRILLGGCRNHRNYDIGAYAGE 426
H CM ++ S AG EA+E +++ +V W LL R N +G +
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 427 KLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFV 486
L+E Y LL +IY+ G+WEDV VR M+K R + + PGC ++LK +VH
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLR 506
Query: 487 VG 488
+G
Sbjct: 507 LG 508
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 161/350 (46%), Gaps = 42/350 (12%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLD------ 83
+ + S++S + +T +D+G+ H A+K+G ++ V N+L+ +Y CG+LD
Sbjct: 117 DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLF 176
Query: 84 -------------------------DALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
A + F+ +KN I+W+ M++ Y + + ++
Sbjct: 177 VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSIS 236
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
LF M +G +E TLV ++NAC + EGR +H ++ + + ++L+DMY
Sbjct: 237 LFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYG 296
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
KC + ARR F+ + + V W +I + +G EG L L+ M + P+E+T
Sbjct: 297 KCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVG 356
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGS--ALSAMYAKCGSLDDGYLIFWRMPT 296
VL C+ + QG+ ++ ++ F ++ G ++ +Y+ G ++ +P
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 297 RDV----ISWNAMISGLSQNGHGNKAL-ELFDKMLLEGTKPDTVTFVNLL 341
DV W ++S S GN L E K L+E T P + +LL
Sbjct: 416 EDVTPESTKWANLLS--SSRFTGNPTLGESIAKSLIE-TDPLNYKYYHLL 462
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 188/344 (54%), Gaps = 19/344 (5%)
Query: 151 GRQMHGYSLKLGFGLQLYVL-SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYV 209
GR +HG KLGF + ++ ++L+ YAK G L AR+ F+ + + V W ++I GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 210 QNGDFEGALNLYGKMQIER--------IIPNELTMASVLKACSSLAALDQGKQMHAGIIK 261
+ D +G N M + R + P + TM VL A S L+ G +H I K
Sbjct: 190 SHKD-KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 262 YGFNLEVPV--GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKAL 319
GF EV V G+AL MY+KCG L++ + +F M ++V +W +M +GL+ NG GN+
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 320 ELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDI 379
L ++M G KP+ +TF +LLSA H+GLV+ G + FK M F +TP +EHY C+VD+
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 380 LSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLME-------LG 432
L +AG++ EA +FI + + L R L C + +G G+ L+E L
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 433 SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
E YV LS++ G+W +VE +R+ MK R + PG S++
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 11 AKEAIELFEQMRC-EEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSV- 68
A++A+ LF + C + + +LS +++T L+ G VH K G V V
Sbjct: 199 ARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF 258
Query: 69 -ANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSG 127
ALV +Y+KCG L++A FE KN TW++M TG A +G + L + M SG
Sbjct: 259 IGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
Query: 128 VLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV--LSSLVDMYAKCGSLAD 185
+ P+E T +++A + + EG ++ S+K FG+ + +VD+ K G + +
Sbjct: 319 IKPNEITFTSLLSAYRHIGLVEEGIELFK-SMKTRFGVTPVIEHYGCIVDLLGKAGRIQE 377
Query: 186 ARRGFEYVQ----QPDVVLWTSI 204
A ++++ +PD +L S+
Sbjct: 378 A---YQFILAMPIKPDAILLRSL 397
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 206/416 (49%), Gaps = 36/416 (8%)
Query: 95 KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQM 154
K ++ ++ Y +G+ + +L LF M S V P+ T +I A ++ G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR-------------------------- 188
HG +LK GF +V +S V Y + G L +R+
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 189 --GFEYVQQ---PDVVLWTSIITGYVQNGDFEGALNLYGKM-QIER--IIPNELTMASVL 240
FEY Q+ DVV WT++I G+ + G AL ++G+M Q ER I PNE T SVL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 241 KACSSL--AALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+C++ + GKQ+H ++ L +G+AL MY K G L+ IF ++ +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
V +WNA+IS L+ NG +ALE+F+ M P+ +T + +L+AC+ LVD G F
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
+ E+ I PT EHY C+VD++ RAG L +A FI+S + + LLG C+ H N
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCS 474
++G G++L+ L YV LS+ W + E +R+ M G+ K P S
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 11/236 (4%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA-NALVTLYAKCGSLDDALRT 88
+ FV TS + L++ R+ M + +L+ VA N+L+ + G +D A
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRK-----MFDDILNPCVVACNSLLDACGRNGEMDYAFEY 174
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSM---HCSGVLPSEFTLVGVINACS-- 143
F+ + ++W+ ++ G+++ G KAL +F M + + P+E T V V+++C+
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTS 203
D I G+Q+HGY + L + ++L+DMY K G L A F+ ++ V W +
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 204 IITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGI 259
II+ NG + AL ++ M+ + PN +T+ ++L AC+ +D G Q+ + I
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEE--GENEFVLTSILSDLNRTEF--LDTGRQVHSL 56
+++G++ GL +A+ +F +M E NE S+LS + + G+Q+H
Sbjct: 189 VINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGY 248
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
M ++ ++ AL+ +Y K G L+ AL F+ +K W+A+++ A +G ++A
Sbjct: 249 VMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQA 308
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACS 143
L +F M S V P+ TL+ ++ AC+
Sbjct: 309 LEMFEMMKSSYVHPNGITLLAILTACA 335
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 187/354 (52%), Gaps = 36/354 (10%)
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGAL 218
LKLGF +YV ++LV MY G++ DA + F+ + + + V W +ITG GDFE AL
Sbjct: 150 LKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKAL 209
Query: 219 NLYGKMQIERII--------------------------------PNELTMASVLKACSSL 246
KM ++ PNE+T+ ++L A +L
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 247 AALDQGKQMHAGIIKYGF-NLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT--RDVISWN 303
L +HA + K GF ++ V ++L YAKCG + + F +P ++++SW
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 304 AMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW-DYFKMMSD 362
MIS + +G G +A+ +F M G KP+ VT +++L+ACSH GL + + ++F M +
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 363 EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGA 422
E+ ITP V+HY C+VD+L R G+L EA++ ++ +WR+LLG C + + ++
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 423 YAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
KLMEL YVL+S+I+ G++ D + R+ M RGVAK PG S +
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K G S V V ALV +Y G++ DA + F+ +N +TW+ M+TG GD EKAL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 119 LFHSMH--------------------------------CSGVLPSEFTLVGVINACSDLC 146
M C + P+E T++ ++ A +L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 147 AIVEGRQMHGYSLKLGF-GLQLYVLSSLVDMYAKCGSLADARRGFEYVQ--QPDVVLWTS 203
+ +H Y K GF + V +SL+D YAKCG + A + F + + ++V WT+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 204 IITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS--LAALDQGKQMHAGIIK 261
+I+ + +G + A++++ M+ + PN +TM SVL ACS LA + + + + +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 262 YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD-VISWNAMISGLS 310
Y +V L M + G L++ I +P + + W ++ S
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACS 440
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 13/238 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GYA + KEAI LF +M + NE + +IL + L VH+ K
Sbjct: 226 IIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKR 285
Query: 61 GLLSI-VSVANALVTLYAKCGSLDDALRTF-EF-SGNKNSITWSAMVTGYAQSGDSEKAL 117
G + + V N+L+ YAKCG + A + F E +G KN ++W+ M++ +A G ++A+
Sbjct: 286 GFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAV 345
Query: 118 RLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYS-----LKLGFGLQLYVLSS 172
+F M G+ P+ T++ V+NACS + E + ++ K+ ++ Y
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMVNEYKITPDVKHY--GC 402
Query: 173 LVDMYAKCGSLADARR-GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGK-MQIER 228
LVDM + G L +A + E + V+W ++ D E A + K M++ER
Sbjct: 403 LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELER 460
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 233/497 (46%), Gaps = 40/497 (8%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
+E++ ++++M + + EF S++ GR VH + + V NA
Sbjct: 166 QESVSVYKRMMSKGIRAD-EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNA 224
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPS 131
L+++Y + G +D A R F+ +++++W+A++ Y +A +L M+ SGV S
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 132 EFT-------------LVGVIN----------------------ACSDLCAIVEGRQMHG 156
T +G +N ACS + A+ G+ H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 157 YSLK-LGFGLQL-YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
++ F + V +SL+ MY++C L A F+ V+ + W SII+G+ N
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY-GFNLEVPVGSA 273
E L +M + PN +T+AS+L + + L GK+ H I++ + + + ++
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L MYAK G + +F M RD +++ ++I G + G G AL F M G KPD
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 334 TVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
VT V +LSACSH LV G F M F I +EHY+CMVD+ RAG L++A++
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 394 ESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPES-SAYVLLSSIYTALGQW 452
+ + + LL C H N +IG +A +KL+ PE Y+LL+ +Y G W
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 453 EDVELVRRMMKARGVAK 469
+ V+ ++ GV K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 199/430 (46%), Gaps = 44/430 (10%)
Query: 7 SLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNR----TEFLDTGRQVHSLAMKNGL 62
S G EA F +R + G +EFVL S S L+ EF+ G+Q+H+ + +GL
Sbjct: 58 SHGQLYEAFRTFSLLR--YQSGSHEFVLYSSASLLSTCVGFNEFV-PGQQLHAHCISSGL 114
Query: 63 LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHS 122
+ LVT Y+ LD+A E S + + W+ ++ Y ++ ++++ ++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 123 MHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS 182
M G+ EFT VI AC+ L GR +HG LYV ++L+ MY + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 183 LADARRGFEYVQQPDVVLWTSIITGY---------------------------------- 208
+ ARR F+ + + D V W +II Y
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 209 -VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY-GFNL 266
++ G++ GALN M+ + + M + LKACS + AL GK H +I+ F+
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 267 EVP-VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
++ V ++L MY++C L +++F ++ + +WN++ISG + N + L +M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
LL G P+ +T ++L + +G + G ++ + + + +VD+ +++G+
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 386 LNEAKEFIES 395
+ AK +S
Sbjct: 475 IIAAKRVFDS 484
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 233/497 (46%), Gaps = 40/497 (8%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
+E++ ++++M + + EF S++ GR VH + + V NA
Sbjct: 166 QESVSVYKRMMSKGIRAD-EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNA 224
Query: 72 LVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPS 131
L+++Y + G +D A R F+ +++++W+A++ Y +A +L M+ SGV S
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 132 EFT-------------LVGVIN----------------------ACSDLCAIVEGRQMHG 156
T +G +N ACS + A+ G+ H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 157 YSLK-LGFGLQL-YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
++ F + V +SL+ MY++C L A F+ V+ + W SII+G+ N
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERS 404
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY-GFNLEVPVGSA 273
E L +M + PN +T+AS+L + + L GK+ H I++ + + + ++
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
L MYAK G + +F M RD +++ ++I G + G G AL F M G KPD
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 334 TVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
VT V +LSACSH LV G F M F I +EHY+CMVD+ RAG L++A++
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 394 ESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPES-SAYVLLSSIYTALGQW 452
+ + + LL C H N +IG +A +KL+ PE Y+LL+ +Y G W
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 453 EDVELVRRMMKARGVAK 469
+ V+ ++ GV K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 199/430 (46%), Gaps = 44/430 (10%)
Query: 7 SLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNR----TEFLDTGRQVHSLAMKNGL 62
S G EA F +R + G +EFVL S S L+ EF+ G+Q+H+ + +GL
Sbjct: 58 SHGQLYEAFRTFSLLR--YQSGSHEFVLYSSASLLSTCVGFNEFV-PGQQLHAHCISSGL 114
Query: 63 LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHS 122
+ LVT Y+ LD+A E S + + W+ ++ Y ++ ++++ ++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 123 MHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGS 182
M G+ EFT VI AC+ L GR +HG LYV ++L+ MY + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 183 LADARRGFEYVQQPDVVLWTSIITGY---------------------------------- 208
+ ARR F+ + + D V W +II Y
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 209 -VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY-GFNL 266
++ G++ GALN M+ + + M + LKACS + AL GK H +I+ F+
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 267 EVP-VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
++ V ++L MY++C L +++F ++ + +WN++ISG + N + L +M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
LL G P+ +T ++L + +G + G ++ + + + +VD+ +++G+
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 386 LNEAKEFIES 395
+ AK +S
Sbjct: 475 IIAAKRVFDS 484
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 203/382 (53%), Gaps = 33/382 (8%)
Query: 51 RQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQS 110
+Q+H+ +K+ L + + L+++ + G A F + ++ TW+ M+ + +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 111 GDSEKALRLFHSMHCSGVLP-SEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV 169
+AL LF M S +FT VI AC +I G Q+HG ++K GF ++
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 170 LSSLVDMYAKCGSLADARRGFE-----------------------------YVQQP--DV 198
++L+D+Y KCG R+ F+ + Q P +V
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 199 VLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAG 258
V WT++IT YV+N + A L+ +MQ++ + PNE T+ ++L+A + L +L G+ +H
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 259 IIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKA 318
K GF L+ +G+AL MY+KCGSL D +F M + + +WN+MI+ L +G G +A
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 319 LELFDKMLLEGT-KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
L LF++M E + +PD +TFV +LSAC++ G V G YF M + I+P EH ACM+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 378 DILSRAGKLNEAKEFIESAEVD 399
+L +A ++ +A +ES + D
Sbjct: 397 QLLEQALEVEKASNLVESMDSD 418
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 144/285 (50%), Gaps = 33/285 (11%)
Query: 12 KEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
+EA+ LF M + ++F ++ + + G QVH LA+K G + V N
Sbjct: 100 REALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNT 159
Query: 72 LVTLYAKCGSLDDALRTF---------------------------EFSGN----KNSITW 100
L+ LY KCG D + F E N +N ++W
Sbjct: 160 LMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSW 219
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
+AM+T Y ++ ++A +LF M V P+EFT+V ++ A + L ++ GR +H Y+ K
Sbjct: 220 TAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK 279
Query: 161 LGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNL 220
GF L ++ ++L+DMY+KCGSL DAR+ F+ +Q + W S+IT +G E AL+L
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSL 339
Query: 221 YGKMQIERII-PNELTMASVLKACSSLAALDQGKQMHAGIIK-YG 263
+ +M+ E + P+ +T VL AC++ + G + +I+ YG
Sbjct: 340 FEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYG 384
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 38/289 (13%)
Query: 139 INACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDV 198
+ CS+ + +Q+H +K ++ L+ + + G A F +Q P
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 199 VLWTSIITGYVQNGDFEGALNLYGKMQIERIIP-NELTMASVLKACSSLAALDQGKQMHA 257
W +I N AL L+ M I ++ T V+KAC + +++ G Q+H
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD------------------- 298
IK GF +V + L +Y KCG D G +F +MP R
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 299 ------------VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
V+SW AMI+ +N ++A +LF +M ++ KP+ T VNLL A +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 347 MGLVDRG-WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+G + G W + + F + + ++D+ S+ G L +A++ +
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLG--TALIDMYSKCGSLQDARKVFD 310
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++ Y EA +LF +M+ ++ + NEF + ++L + L GR VH A KN
Sbjct: 222 MITAYVKNRRPDEAFQLFRRMQVDDVK-PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKN 280
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
G + + AL+ +Y+KCGSL DA + F+ K+ TW++M+T G E+AL LF
Sbjct: 281 GFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLF 340
Query: 121 -HSMHCSGVLPSEFTLVGVINACSDLCAIVEG 151
+ V P T VGV++AC++ + +G
Sbjct: 341 EEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 220/480 (45%), Gaps = 56/480 (11%)
Query: 45 EFLDTGRQVHSL----AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITW 100
+F+ +GR + N L +I S++ + A + A F F N ++ +
Sbjct: 26 QFITSGRISNDFKQNSVFANVLFAITSISP---SASASKEVVSYATSVFRFITNPSTFCF 82
Query: 101 SAMV---TGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS-----DLCAIVEGR 152
+ ++ T + S S K R F M V P T V AC+ DL + +
Sbjct: 83 NTIIRICTLHEPSSLSSK--RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLV---K 137
Query: 153 QMHGYSLKLGFGLQLYVLSSLVDMYA-------------------------------KCG 181
+H +L+ G L+ L++L+ +Y+ K
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAR 197
Query: 182 SLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
+ AR F+ + D+V W S+I+GY Q A+ L+ +M + P+ + + S L
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS 301
AC+ +GK +H + ++ + + L YAKCG +D IF + + +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFT 317
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMS 361
WNAMI+GL+ +G+G ++ F KM+ G KPD VTF+++L CSH GLVD + F M
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMR 377
Query: 362 DEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG----LCLWRILLGGCRNHRN 417
+D+ ++HY CM D+L RAG + EA E IE D G L W LLGGCR H N
Sbjct: 378 SLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Query: 418 YDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMM-KARGVAKEPGCSWI 476
+I A ++ L + Y ++ +Y +WE+V VR ++ + + V K G S +
Sbjct: 438 IEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SGYA + +EAI+LF++M + +N + S LS ++ G+ +H +
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVALGLKPDN-VAIVSTLSACAQSGDWQKGKAIHDYTKRK 278
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
L +A LV YAKCG +D A+ FE +K TW+AM+TG A G+ E + F
Sbjct: 279 RLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYF 338
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL-GFGLQLYVLSSLVDMYAK 179
M SG+ P T + V+ CS + E R + L ++ + D+ +
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGR 398
Query: 180 CGSLADARRGFEYV-----QQPDVVLWTSIITGYVQNGDFEGA 217
G + +A E + + ++ W+ ++ G +G+ E A
Sbjct: 399 AGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 194/409 (47%), Gaps = 78/409 (19%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+SGY G +EA +LF+ M EN+ V +++
Sbjct: 173 MISGYWKWGNKEEACKLFDMM------PENDVVSWTVM---------------------- 204
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+T +AK L++A + F+ K+ ++W+AM++GYAQ+G +E ALRLF
Sbjct: 205 ------------ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
+ M GV P+E T V VI+ACS R + + L +V ++L+DM+AKC
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 181 GSLADARRGF-EYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII--------- 230
+ ARR F E Q ++V W ++I+GY + GD A L+ M ++
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 231 -----------------------PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
P+E+TM SVL AC +A L+ G + I K L
Sbjct: 373 AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLN 432
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLL 327
+L MYA+ G+L + +F M RDV+S+N + + + NG G + L L KM
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACM 376
EG +PD VT+ ++L+AC+ GL+ G FK + + P +HYACM
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 155/403 (38%), Gaps = 108/403 (26%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
N ++M +++ + LRL+ G++P F+ VI + G
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQ 124
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP------------------- 196
KLGF YV + ++DMY K S+ AR+ F+ + Q
Sbjct: 125 ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKE 184
Query: 197 ------------DVVLWTSIIT-------------------------------GYVQNGD 213
DVV WT +IT GY QNG
Sbjct: 185 EACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGF 244
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
E AL L+ M + PNE T V+ ACS A + + I + L V +A
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 274 LSAMYAKCGSLDDGYLIF-----------WR---------------------MPTRDVIS 301
L M+AKC + IF W MP R+V+S
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTFVNLLSACSHMGLVDRG---WDYF 357
WN++I+G + NG A+E F+ M+ G +KPD VT +++LSAC HM ++ G DY
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE-FIESAEVD 399
+ + I Y ++ + +R G L EAK F E E D
Sbjct: 425 R----KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD 463
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 190 FEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
F+ V P+V + S+ + + L LY + I+P+ + V+K+ L
Sbjct: 63 FDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL 122
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
Q A + K GF + V + + MY K S++ +F ++ R WN MISG
Sbjct: 123 FQ-----ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
+ G+ +A +LFD M + D V++ +++ + + ++ YF M ++
Sbjct: 178 WKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMPEK 227
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
K C L + K +H I +L++ L MY+ CG ++ +F +M +++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+W +I ++NG G A+++F + EG PD F + AC +G VD G +F+ M
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
S ++ I P++E Y +V++ + G L+EA EF+E ++ + +W L+ R H N ++
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
G Y E + L + I E L +R GV KS
Sbjct: 442 GDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILHGV-----------KS 490
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGY 514
+ F GD+ P+ DE+ LR L M + GY
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGY 524
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 12/223 (5%)
Query: 106 GYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL 165
+ + G +KAL + + L+ + C + + E + +HG K+ +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHG---KISASV 284
Query: 166 QLYVLSS---LVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
LSS L++MY+ CG +A FE + + ++ W II + +NG E A++++
Sbjct: 285 SHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFS 344
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKC 281
+ + E IP+ + AC L +D+G + + YG + +L MYA
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 282 GSLDDGYLIFWRMPTR-DVISWNAMISGLSQNGHGNKALELFD 323
G LD+ RMP +V W +++ LS+ HGN LEL D
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMN-LSR-VHGN--LELGD 443
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
+S + L+ +Y+ CG ++A FE KN TW ++ +A++G E A+ +F
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYV--LSSLVDMYAKCGSL 183
G +P G+ AC L + EG +H S+ +G+ + SLV+MYA G L
Sbjct: 349 EGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 184 ADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
+A E+V+ +P+V +W +++ +G+ E L Y +E + P L S
Sbjct: 408 DEA---LEFVERMPMEPNVDVWETLMNLSRVHGNLE--LGDYCAEVVEFLDPTRLNKQS 461
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+ + C AL + K +H I ++ +++ MY+ CGS++D +F MP R+
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 299 VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK 358
+ +W +I ++NG G A++ F + EG KPD F + AC +G ++ G +F+
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 359 MMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNY 418
M E+ I P +EHY +V +L+ G L+EA F+ES E + + LW L+ R H +
Sbjct: 307 SMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPN--VDLWETLMNLSRVHGDL 364
Query: 419 DIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIEL 478
+G + + +L A L L + +LV+ K + +AK P
Sbjct: 365 ILGDRCQDMVEQL-----DASRLNKESKAGLVPVKSSDLVKE--KLQRMAKGPNYG---- 413
Query: 479 KSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
+ GD P+ E+ L+ L + M + GY P
Sbjct: 414 ---IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVP 448
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 22/227 (9%)
Query: 3 SGYASL---------GLAKEAIELFEQMRCEEE--EGENEFVLTSILSDLNRTEFLDTGR 51
SG++SL G K+A+E+ + R E + F + + D + L +
Sbjct: 145 SGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGD---AQALQEAK 201
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
VH + +S +S N+++ +Y+ CGS++DAL F +N TW ++ +A++G
Sbjct: 202 VVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNG 261
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFG----LQL 167
E A+ F G P + AC L + EG +H S+ +G ++
Sbjct: 262 QGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEH 320
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDF 214
YV SLV M A+ G L +A R E + +P+V LW +++ +GD
Sbjct: 321 YV--SLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHGDL 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 4/201 (1%)
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ-L 167
+ G +KA+ + S G + L + C D A+ E + +H + + G+ +
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEF-ITSSVGISDI 216
Query: 168 YVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
+S+++MY+ CGS+ DA F + + ++ W +I + +NG E A++ + + + E
Sbjct: 217 SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQE 276
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDD 286
P+ + AC L +++G + K YG + +L M A+ G LD+
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 287 GYLIFWRMPTRDVISWNAMIS 307
L F +V W +++
Sbjct: 337 A-LRFVESMEPNVDLWETLMN 356
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 109/202 (53%)
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
+P+ + ++C++L +L+ K++H ++ F + + + + +M+ +C S+ D
Sbjct: 233 MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKR 292
Query: 290 IFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+F M +D+ SW+ M+ S NG G+ AL LF++M G KP+ TF+ + AC+ +G
Sbjct: 293 VFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGG 352
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILL 409
++ + +F M +E I+P EHY ++ +L + G L EA+++I + W +
Sbjct: 353 IEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMR 412
Query: 410 GGCRNHRNYDIGAYAGEKLMEL 431
R H + D+ Y E ++++
Sbjct: 413 NYARLHGDIDLEDYMEELMVDV 434
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 10 LAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA 69
L K+AIEL ++ + E FVL + + L+ ++VH +++ +
Sbjct: 220 LYKDAIELLDKGAMPDREC---FVL--LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN 274
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N +++++ +C S+ DA R F+ +K+ +W M+ Y+ +G + AL LF M G+
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL--VDMYAKCGSLADAR 187
P+E T + V AC+ + I E +H S+K G+ L + + KCG L +A
Sbjct: 335 PNEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Query: 188 RGFEYVQ----QPDVVLWTSIITGYVQNGDFE 215
+Y++ +P W ++ +GD +
Sbjct: 394 ---QYIRDLPFEPTADFWEAMRNYARLHGDID 422
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 127 GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADA 186
G +P V + +C++L ++ +++H + L+ F + + ++ M+ +C S+ DA
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 187 RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSL 246
+R F+++ D+ W ++ Y NG + AL+L+ +M + PNE T +V AC+++
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 247 AALDQGKQMHAGIIK--YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS-WN 303
+++ +H +K +G + + + + KCG L + +P W
Sbjct: 351 GGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWE 409
Query: 304 AM 305
AM
Sbjct: 410 AM 411
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 18/277 (6%)
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
K C AL+ + +H II +V +A+ MY+ C S+DD +F MP +
Sbjct: 127 KLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSG 186
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+ M+ NG+G +A++LF + EG KP+ F + S C+ G V G F+ M
Sbjct: 187 TLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAM 246
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
E+ I P++EHY + +L+ +G L+EA F+E ++ + +W L+ R H + ++
Sbjct: 247 YREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVEL 306
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARG-VAKEPGCSWIELK 479
G E + +L + T L + LV KA V KEP S
Sbjct: 307 GDRCAELVEKLDA-------------TRLDKVSSAGLV--ATKASDFVKKEP--STRSEP 349
Query: 480 SLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
F DS HPQ++ I L L +K+ GY P
Sbjct: 350 YFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVP 386
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 7/238 (2%)
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
G+ +A+ + + G L+G+ C A+ R +H + L +
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
+++++MY+ C S+ DA + FE + + + ++ +V NG E A++L+ + + E
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 231 PNELTMASVLKACSSLAALDQGK-QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
PN V C+ + +G Q A +YG + +++ M A G LD+
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 290 IFWRMPTRDVIS-WNAMISGLSQNGH---GNKALELFDKMLLEGTKPDTVTFVNLLSA 343
RMP + W +++ +G G++ EL +K L+ T+ D V+ L++
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK--LDATRLDKVSSAGLVAT 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Query: 43 RTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSA 102
+ E L+ R VH + V NA++ +Y+ C S+DDAL+ FE NS T
Sbjct: 131 KPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCV 190
Query: 103 MVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR-QMHGYSLKL 161
M+ + +G E+A+ LF G P+ V + C+ + EG Q +
Sbjct: 191 MMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREY 250
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFE 215
G + S+ M A G L +A E + +P V +W +++ +GD E
Sbjct: 251 GIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVE 305
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 12/289 (4%)
Query: 52 QVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSG 111
QVH MK+ + ++ N L+ ++ CG LD + F+ +++ +W+ + G + G
Sbjct: 111 QVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 112 DSEKALRLF-----HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQ 166
D E A LF HS + +PS + L V+ AC+ + G+Q+H KLGF +
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPS-WILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 167 --LYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
Y+ SL+ Y + L DA + + V W + +T + G+F+ + + +M
Sbjct: 228 EDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEM 287
Query: 225 QIERIIPNELTMASVLKACSSLA-ALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGS 283
I N ++VLKACS ++ G+Q+HA IK GF + + L MY K G
Sbjct: 288 GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGK 347
Query: 284 LDDGYLIFWRMPTRDVIS-WNAMISGLSQNGHGNKALELFDKMLLEGTK 331
+ D +F +S WNAM++ QNG +A++L +M G K
Sbjct: 348 VKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 4 GYASLGLAKEAIELFEQMRCEEEEGENE---FVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
G +G ++A LF M ++G + ++L +L + G+QVH+L K
Sbjct: 163 GCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKL 222
Query: 61 GLLSIVS--VANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
G + ++ +L+ Y + L+DA N N++ W+A VT + G+ ++ +R
Sbjct: 223 GFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIR 282
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLC-AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMY 177
F M G+ + V+ ACS + G+Q+H ++KLGF + L++MY
Sbjct: 283 DFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMY 342
Query: 178 AKCGSLADARRGFEYVQ-QPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
K G + DA + F+ + + V W +++ Y+QNG + A+ L +M+
Sbjct: 343 GKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMK 391
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 112/248 (45%), Gaps = 8/248 (3%)
Query: 170 LSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER- 228
++ L+ M+ CG L R+ F+ + D W + G ++ GD+E A L+ M
Sbjct: 126 INRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQ 185
Query: 229 ----IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP--VGSALSAMYAKCG 282
IP+ + + VLKAC+ + + GKQ+HA K GF E + +L Y +
Sbjct: 186 KGAFKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFR 244
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
L+D L+ ++ + ++W A ++ + G + + F +M G K + F N+L
Sbjct: 245 CLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLK 304
Query: 343 ACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
ACS + R + + ++++ + GK+ +A++ +S++ + +
Sbjct: 305 ACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSV 364
Query: 403 CLWRILLG 410
W ++
Sbjct: 365 SCWNAMVA 372
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 185/402 (46%), Gaps = 31/402 (7%)
Query: 13 EAIELFE-QMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANA 71
+A+ +E ++ E + E + ++++S L R + +++ A G + V +A
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 72 LVTLYAKCGSLDDALRTF----EFSGNKNSITWSAMVTGYAQSG-DSEKALRLFHSMHCS 126
L++ Y + G ++A+ F E+ N +T++A++ + G + ++ + F M +
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 127 GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADA 186
GV P T ++ CS R + ++ ++L+D K G + A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 187 RRGFEYVQQ-------PDVVLWTSIITGYVQNGDFEGALNLYGKMQ-----IERIIPNEL 234
FE + Q P+VV ++++I G+ + G F+ ALNL+G+M+ ++R+ N L
Sbjct: 394 ---FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
++ K S ALD ++M + G +V +AL Y K G D+ +F M
Sbjct: 451 -LSIYTKVGRSEEALDILREMAS----VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 295 PTRDV----ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
V ++++ +I G S+ G +A+E+F + G + D V + L+ A GLV
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 351 DRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
M+ E I+P V Y ++D R+ ++ + ++
Sbjct: 566 GSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 152/370 (41%), Gaps = 51/370 (13%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNR--TEFLDTGRQVHSLAM 58
++S Y GL +EAI +F M+ E N +++ + EF + +
Sbjct: 274 LISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-Q 331
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSE 114
+NG+ N+L+ + ++ G + A F+ N+ + +++ ++ + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
A + M ++P+ + VI+ + E + G LG L ++L+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 175 DMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
+Y K G +A R + DVV + +++ GY + G ++ ++ +M+ E ++
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
PN LT ++++ Y+K G + I
Sbjct: 512 PNLLTYSTLIDG-----------------------------------YSKGGLYKEAMEI 536
Query: 291 FWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
F + DV+ ++A+I L +NG A+ L D+M EG P+ VT+ +++ A
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 347 MGLVDRGWDY 356
+DR DY
Sbjct: 597 SATMDRSADY 606
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 159/350 (45%), Gaps = 27/350 (7%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQV-HSLAMKNGLLSIVS 67
GL + A LF++M E ++ F ++L + + +D ++ + +K + ++VS
Sbjct: 353 GLWEAARNLFDEMTNRRIE-QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 68 VANALVTLYAKCGSLDDALRTF---EFSGNK-NSITWSAMVTGYAQSGDSEKALRLFHSM 123
+ ++ +AK G D+AL F + G + ++++ +++ Y + G SE+AL + M
Sbjct: 412 YS-TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 124 HCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
G+ T ++ E +++ + L S+L+D Y+K G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 184 ADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
+A F + + DVVL++++I +NG A++L +M E I PN +T S+
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 240 LKACSSLAALDQGKQM-HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
+ A A +D+ + G + + SALSA+ G + +F ++ T
Sbjct: 591 IDAFGRSATMDRSADYSNGGSLPFS-------SSALSALTETEG--NRVIQLFGQLTTES 641
Query: 299 VISWNAMISGLSQNGHGNKA--LELFDKMLLEGTKPDTVTFVNLLSACSH 346
N + + G + LE+F KM KP+ VTF +L+ACS
Sbjct: 642 ----NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 23/280 (8%)
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI 300
K C + AL++ + +H I L+ + MY+ C S DD +F MP R+
Sbjct: 120 KLCGEVEALEEARVVHDCITP----LDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSE 175
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+W MI L++NG G +A+++F + + EG KPD F + AC +G ++ G +F+ M
Sbjct: 176 TWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESM 235
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDI 420
++ + ++E Y ++++L+ G L+EA +F+E V+ + +W L+ C ++
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 421 GAYAGEKLMELG----SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWI 476
G E + +L S ES+A + A +E ++ + + + +P
Sbjct: 296 GDRFAELIKKLDASRMSKESNA-----GLVAAKASDSAMEKLKELRYCQMIRDDP----- 345
Query: 477 ELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQP 516
K +H F GD+ H S R L M D G+ P
Sbjct: 346 --KKRMHEFRAGDTSHLG---TVSAFRSLKVQMLDIGFVP 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
+ ++ +Y+ C S DDAL F +NS TW M+ A++G+ E+A+ +F G
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL----YVLSSLVDMYAKCGSLAD 185
P + V AC + I EG +H S+ +G+ L YV ++++M A CG L +
Sbjct: 207 PDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYV--NVIEMLAACGHLDE 263
Query: 186 ARRGFEYVQ-QPDVVLWTSI-----ITGYVQNGD 213
A E + +P V +W ++ + GY++ GD
Sbjct: 264 ALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 9/196 (4%)
Query: 135 LVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ 194
L+G+ C ++ A+ E R +H L ++++MY+ C S DA F +
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 195 QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQ 254
+ + W ++I +NG+ E A++++ + E P++ +V AC S+ +++G
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 255 MHAGIIK-YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVIS-WNAMISGLSQN 312
+ + YG L + + M A CG LD+ RM + W +++
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 313 GH---GNKALELFDKM 325
G+ G++ EL K+
Sbjct: 291 GYLELGDRFAELIKKL 306
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 180/406 (44%), Gaps = 14/406 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY G + +L E M+ + N ++ SI+ L R L + S ++
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKN----SITWSAMVTGYAQSGDSEKA 116
G+L V L+ + K G + A + F +++ +T++A+++G+ Q GD +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+LFH M C G+ P T +IN + + ++H + ++ G + ++L+D
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
K G L A + QP++ + SI+ G ++G+ E A+ L G+ + + +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG-YLIF 291
+T +++ A +D+ +++ ++ G + + L + G L+DG L+
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 292 WRMP---TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
W + + ++N+++ + A ++ M G PD T+ NL+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+ W F+ M + + +V Y+ ++ + K EA+E +
Sbjct: 646 NMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 144/350 (41%), Gaps = 15/350 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRT-EFLDTGRQVHSLAMK 59
++ G+ G + A + F +M + + T+I+S + + ++ G+ H + K
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMH-SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRT----FEFSGNKNSITWSAMVTGYAQSGDSEK 115
GL L+ Y K G + DA R + + N +T++ ++ G + GD +
Sbjct: 416 -GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
A L H M G+ P+ FT ++N I E ++ G G ++L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 176 MYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
Y K G + A+ + + QP +V + ++ G+ +G E L M + I P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
N T S++K L ++ + G + L + K ++ + + +F
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 292 WRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
M + V +++ +I G + +A E+FD+M EG D F
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
PDV+ +++++ GY + G+ + L M+ + + PN S++ + L + ++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQ 311
+ +I+ G + V + L + K G + F+ M +R DV+++ A+ISG Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 312 NGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
G +A +LF +M +G +PD+VTF L++ G + + M + +P V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVV 457
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
Y ++D L + G L+ A E + +W+I
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHE--------MWKI 485
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 180/406 (44%), Gaps = 14/406 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY G + +L E M+ + N ++ SI+ L R L + S ++
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKN----SITWSAMVTGYAQSGDSEKA 116
G+L V L+ + K G + A + F +++ +T++A+++G+ Q GD +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+LFH M C G+ P T +IN + + ++H + ++ G + ++L+D
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
K G L A + QP++ + SI+ G ++G+ E A+ L G+ + + +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG-YLIF 291
+T +++ A +D+ +++ ++ G + + L + G L+DG L+
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 292 WRMP---TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
W + + ++N+++ + A ++ M G PD T+ NL+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+ W F+ M + + +V Y+ ++ + K EA+E +
Sbjct: 646 NMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 144/350 (41%), Gaps = 15/350 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRT-EFLDTGRQVHSLAMK 59
++ G+ G + A + F +M + + T+I+S + + ++ G+ H + K
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMH-SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRT----FEFSGNKNSITWSAMVTGYAQSGDSEK 115
GL L+ Y K G + DA R + + N +T++ ++ G + GD +
Sbjct: 416 -GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
A L H M G+ P+ FT ++N I E ++ G G ++L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 176 MYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
Y K G + A+ + + QP +V + ++ G+ +G E L M + I P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
N T S++K L ++ + G + L + K ++ + + +F
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 292 WRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
M + V +++ +I G + +A E+FD+M EG D F
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 13/216 (6%)
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
PDV+ +++++ GY + G+ + L M+ + + PN S++ + L + ++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQ 311
+ +I+ G + V + L + K G + F+ M +R DV+++ A+ISG Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 312 NGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVE 371
G +A +LF +M +G +PD+VTF L++ G + + M + +P V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVV 457
Query: 372 HYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRI 407
Y ++D L + G L+ A E + +W+I
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHE--------MWKI 485
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 221/496 (44%), Gaps = 38/496 (7%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++GY G ++A+ + E+M E + + +IL +++ L +++ KN
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSI----TWSAMVTGYAQSGDSEKA 116
GL+ N LV Y K GSL +A + E N + T++ ++ G +G +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGR----QMHGYSLKLGFGLQLYVLSS 172
L L +M + P T +I+ C +L +E R QM +K Q+ S
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKAN---QVTHNIS 386
Query: 173 LVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
L + + A R+ E V PD+V + ++I Y++ GD GAL + +M +
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL-EVPVGSALSAMYAKCGSLDDG 287
I N +T+ ++L A LD+ + K GF + EV G+ + + + ++
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE-EKVEKA 505
Query: 288 YLIFWRMP----TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
++ M T V ++N++I GL +G A+E FD++ G PD TF +++
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 344 CSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC--MVDILSRAGKLNEAKEF----IESAE 397
G V++ ++++ S + P ++Y C +++ L + G +A F IE E
Sbjct: 566 YCKEGRVEKAFEFYN-ESIKHSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTLIEERE 622
Query: 398 VDHGLCLWRILLGGCRNHR---NYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWED 454
VD + ++ C++ + YD+ + EK +E P+ Y S+ G+ +
Sbjct: 623 VD-TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE---PDRFTYNSFISLLMEDGKLSE 678
Query: 455 V-ELVRRMMKARGVAK 469
EL+++ G K
Sbjct: 679 TDELLKKFSGKFGSMK 694
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 46/300 (15%)
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALR 118
K+ L+S + ++A ++L C SL S + + ++ Y G AL+
Sbjct: 98 KSLLVSYIRTSDASLSL---CNSLLHP--NLHLSPPPSKALFDIALSAYLHEGKPHVALQ 152
Query: 119 LFHSMHCSGVLPSEFT----LVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
+F M + P+ T L+G++ S +I R++ +K+G L + + LV
Sbjct: 153 IFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF-SISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 175 DMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE-RIIPNE 233
+ GY G E AL + +M E ++ P+
Sbjct: 212 N-------------------------------GYCLEGKLEDALGMLERMVSEFKVNPDN 240
Query: 234 LTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWR 293
+T ++LKA S L K++ + K G + L Y K GSL + + I
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 294 MPTRDVI----SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
M +V+ ++N +I+GL G + LEL D M +PD VT+ L+ C +GL
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 166/391 (42%), Gaps = 49/391 (12%)
Query: 71 ALVTLYAKCGSLDDALRTFEFSGNKN------SITWSAMVTGYAQSGDSEKALRLFHSMH 124
+L+ + + G +D+A+ E NKN + SA+++G+ + G E AL F S
Sbjct: 139 SLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAV 198
Query: 125 CSGVL-PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
SGVL P+ T +++A L + E R + GF S+ + Y K G+L
Sbjct: 199 DSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGAL 258
Query: 184 ADA----RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
DA R E DVV ++ +I G + G+ E AL L GKM E + PN +T ++
Sbjct: 259 VDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-- 297
++ + L++ + I+ G ++ + L + G+L+ + + M R
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 298 --DVISWNAMISGLSQNGHGNKALE--------------LFD---------------KML 326
++++N +I+GL G ++A E L D +
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 327 LEGTKPDTVTFVN-LLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
LE P + N LL A MG ++ M E D+TP YA M+ + G+
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMP-EMDLTPDTATYATMIKGYCKTGQ 497
Query: 386 LNEAKEF---IESAEVDHGLCLWRILLGGCR 413
+ EA E + + V +C RI+ C+
Sbjct: 498 IEEALEMFNELRKSSVSAAVCYNRIIDALCK 528
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 63 LSIVSVANALVTLYAKC--GSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
LS + V + + + C G L AL F+ ++ N+IT+++++ G Q G +A
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
LRLF S+ G++PSE T +I+ ++ ++ + G + + +S+VD
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
Y K G DA R PD +S+I GY + GD E AL+++ + + + I
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 161/340 (47%), Gaps = 13/340 (3%)
Query: 87 RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC 146
R ++ ++IT+S +V G+ G +A+ L M P T+ +IN
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD----VVLWT 202
+ E + ++ GF +++ K G+ A A F +++ + VV ++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 203 SIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY 262
+I ++G F+ AL+L+ +M+++ I + +T +S++ + D G +M +I
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 263 GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKA 318
+V SAL ++ K G L + ++ M TR D I++N++I G + ++A
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 319 LELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVD 378
++FD M+ +G +PD VT+ L+++ VD G F+ +S + + P Y +V
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVL 428
Query: 379 ILSRAGKLNEAKEFIE---SAEVDHGLCLWRILLGG-CRN 414
++GKLN AKE + S V + + ILL G C N
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 177/414 (42%), Gaps = 19/414 (4%)
Query: 65 IVSVANALVTLYAKCGSLDDAL----RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+V+V+ + L K G + +AL R E+ + +T+ ++ +SG+S AL LF
Sbjct: 175 LVTVSTLINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
M + S VI++ + + + G + SSL+
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 181 GSLAD-ARRGFEYVQQ---PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
G D A+ E + + PDVV ++++I +V+ G A LY +M I P+ +T
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
S++ L + QM ++ G ++ S L Y K +DDG +F + +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 297 R----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
+ + I++N ++ G Q+G N A ELF +M+ G P VT+ LL G +++
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 353 GWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE---VDHGLCLWRILL 409
+ F+ M +T + Y ++ + A K+++A S V + + +++
Sbjct: 474 ALEIFEKMQKS-RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 410 GGCRNHRNYDIGAYAGEKLMELG-SPESSAY-VLLSSIYTALGQWEDVELVRRM 461
GG + K+ E G +P+ Y +L+ + G VEL+ M
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 29/295 (9%)
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGF--GLQL------ 167
A+ LF SM S LP+ + LC+ V + Y L LGF G++L
Sbjct: 54 AIDLFESMIQSRPLPTPIDF-------NRLCSAVA--RTKQYDLVLGFCKGMELNGIEHD 104
Query: 168 -YVLSSLVDMYAKCGSLADAR----RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYG 222
Y ++ +++ Y + L A R ++ +PD + +++++ G+ G A+ L
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 223 KMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL-EVPVGSALSAMYAKC 281
+M + P+ +T+++++ + + + +++YGF EV G L+ + K
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL-CKS 223
Query: 282 GSLDDGYLIFWRMPTRD----VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
G+ +F +M R+ V+ ++ +I L ++G + AL LF++M ++G K D VT+
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 338 VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
+L+ + G D G + M +I P V ++ ++D+ + GKL EAKE
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 21/244 (8%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
EA EL+ +M + S++ + L Q+ L + G + + L
Sbjct: 333 EAKELYNEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 73 VTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
+ Y K +DD +R F +K N+IT++ +V G+ QSG A LF M GV
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 129 LPSEFTLVGVINACSDLCAIVEG----RQMHGYSLKLGFGLQLYVL------SSLVDMYA 178
PS T +++ D + + +M + LG G+ ++ S + D ++
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 179 KCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
SL+D +G +PDVV + +I G + G A L+ KM+ + P++ T
Sbjct: 512 LFCSLSD--KGV----KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 239 VLKA 242
+++A
Sbjct: 566 LIRA 569
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 17/225 (7%)
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
D+++ + +I+GL G ++AL L D+M+ G +PD VT+ +L+ G D F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE---VDHGLCLWRILLGGCRN 414
+ M +E +I +V Y+ ++D L + G ++A E + + + L+GG N
Sbjct: 234 RKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 415 HRNYDIGAYAGEKLMELG-SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGC 473
+D GA +++ P+ + L ++ G+ + + + M RG+A +
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT-- 350
Query: 474 SWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHL 518
I SL+ F + +H E + LM +G +P +
Sbjct: 351 --ITYNSLIDGFCKENCLH--------EANQMFDLMVSKGCEPDI 385
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 143/335 (42%), Gaps = 13/335 (3%)
Query: 61 GLLSIVSVANALVTLYAKCGSLDDAL---RTFEFSGNKNSI-TWSAMVTGYAQSGDSEKA 116
G V L+ LY K G + AL R + G K+++ T+S M+ G+ + D A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+F M G+ P +I+A + + Q KL ++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
YAK G + + F+ +++ P V + +I G V+ E A+ + +M + + N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
E T +++ +S+ + + + G ++++ AL K G + +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 293 RMPTRDV----ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
M R++ +N +I G ++ G +A +L +M EG KPD T+ + +SACS G
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRA 383
++R + M + + P ++ Y ++ +RA
Sbjct: 779 DMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARA 812
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 170/397 (42%), Gaps = 52/397 (13%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++ Y +G +A+E+ M+ EE N + +++ + + V +K
Sbjct: 490 LINLYTKVGKISKALEVSRVMK-EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE----FSGNKNSITWSAMVTGYAQSGDSEKA 116
G+ V + N +++ + G++D A++T + + T+ ++ GYA+SGD ++
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L +F M G +P+ T G+IN +VE RQM ++D
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLING------LVEKRQMEK-------------AVEILDE 649
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
G A+ +T I+ GY GD A + ++Q E + + T
Sbjct: 650 MTLAGVSANEH------------TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 237 ASVLKACSS----LAALDQGKQMHA-GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
++LKAC +AL K+M A I + F V + L +A+ G + + +
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSF-----VYNILIDGWARRGDVWEAADLI 752
Query: 292 WRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
+M D+ ++ + IS S+ G N+A + ++M G KP+ T+ L+ +
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMV-DILSRA 383
L ++ ++ M I P Y C++ +LSRA
Sbjct: 813 SLPEKALSCYEEMK-AMGIKPDKAVYHCLLTSLLSRA 848
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 44/326 (13%)
Query: 75 LYAKCGSLD----DAL-RTFEFSGNKNSIT-WSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
+YA C + + +AL R E G I + M+ GY D +K L +F + G
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
P+ T +IN + + I + ++ + G L S +++ + K A+A
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 189 GFEYV----QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
FE + +PDV+L+ +II+ + G+ + A+ +MQ R P T ++ +
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
+ + +LEV M +CG + PT V ++N
Sbjct: 601 KSGDMRR-------------SLEV------FDMMRRCGCV----------PT--VHTFNG 629
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE- 363
+I+GL + KA+E+ D+M L G + T+ ++ + +G + ++YF + +E
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 364 FDITPTVEHYACMVDILSRAGKLNEA 389
D+ + Y ++ ++G++ A
Sbjct: 690 LDV--DIFTYEALLKACCKSGRMQSA 713
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 129/317 (40%), Gaps = 9/317 (2%)
Query: 86 LRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDL 145
+ FE + + MV Y + GD +A F M G+ P+ +I+A +
Sbjct: 298 ISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVG 357
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP----DVVLW 201
+ E + G + L S +V ++K G A F+ ++ + ++
Sbjct: 358 RDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIY 417
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK 261
II + Q + E A L +M+ E I +++ + +A +G + + +
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 262 YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLSQNGHGNK 317
GF V L +Y K G + + M ++ +++ MI+G +
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
A +F+ M+ EG KPD + + N++SA MG +DR K M + PT + ++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM-QKLRHRPTTRTFMPII 596
Query: 378 DILSRAGKLNEAKEFIE 394
+++G + + E +
Sbjct: 597 HGYAKSGDMRRSLEVFD 613
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 183/411 (44%), Gaps = 15/411 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G +EA +F + EE + T++++ L R + + + S KN
Sbjct: 325 LMNGLIERGRPQEAHSIFNTL-IEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEF---SGNKNSI-TWSAMVTGYAQSGDSEKA 116
GL + NA++ ++ G+LD A++ FE SG K + T++ ++ GY + G E++
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 117 LRLFHSMHCSGVL-PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
RL M +L P++ T ++ A + I E + G + ++L
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 176 MYAKCGSLADAR-----RGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
YA+ GS A R +P+V +I+ GY + G E AL + +M+ +
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
PN S++K ++ +D ++ + ++G +V S L ++ G + I
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 291 FWRM----PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
+ M D+ +++ + G ++ G KA ++ ++M G +P+ V + ++S
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
G + + +K M ++P + Y ++ A + +A+E ++ E
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 151/366 (41%), Gaps = 25/366 (6%)
Query: 194 QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+P ++ +T+++T + F L+L K++ + P+ + +++ A S LDQ
Sbjct: 350 HKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAM 409
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVI-----SWNAMISG 308
++ + + G + L Y K G L++ + M +++ + N ++
Sbjct: 410 KIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQA 469
Query: 309 LSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF--KMMSDEFDI 366
+A + KM G KPD VTF L A + +G D +M+ ++ +
Sbjct: 470 WCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--V 527
Query: 367 TPTVEHYACMVDILSRAGKLNEAKEF---IESAEVDHGLCLWRILLGGCRNHRNYDIGAY 423
P V +V+ GK+ EA F ++ V L ++ L+ G N + D
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 424 AGEKLMELG-SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLV 482
+ + E G P+ + L + ++++G + E + M G+ + +
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD-----------I 636
Query: 483 HVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSHEIQL 542
H F + + + E ++L + M+ G +P++ + + G+ + + ++
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQ-MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 695
Query: 543 RVCGGV 548
++CG V
Sbjct: 696 KMCGIV 701
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 165/385 (42%), Gaps = 62/385 (16%)
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEF--SG--NKNSITWSAMVTGYAQSGDSE 114
+NG+ + N L+ +D A R FE SG + +T++ M+ GY ++G ++
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINAC---SDLCAIV---------------------- 149
KA+ M G + T + +I AC SD + V
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 150 -----EGRQMHGYS-----LKLGFGLQLYVLSSLVDMYAKCGSLADARR--------GFE 191
EG+ GY+ ++ G + + + L+D YAK GS+ DA R GF
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF- 393
Query: 192 YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQ 251
+PDVV ++ ++ G +NG E AL+ + + + + N + +S++ +D+
Sbjct: 394 ---KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD-----VISWNAMI 306
+++ + + G + +AL + K +D+ +F RM + V ++ ++
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 307 SGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDI 366
SG+ + +AL+L+D M+ +G P F L + G V R DE
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL----DELAP 566
Query: 367 TPTVEHYAC--MVDILSRAGKLNEA 389
+ AC M++ L +AG++ EA
Sbjct: 567 MGVILDAACEDMINTLCKAGRIKEA 591
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 148/329 (44%), Gaps = 22/329 (6%)
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGA 217
G LY + L++ + A R FE ++ +PD+V + ++I GY + G + A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 218 LNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM 277
+ M+ +++T ++++AC + + ++ + + G + S +
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 278 YAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD 333
K G L++GY +F M + +V + +I G +++G A+ L +M+ EG KPD
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 334 TVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD-ITPTVEHYACMVDILSRAGKLNEAKEF 392
VT+ +++ G V+ DYF + FD + Y+ ++D L +AG+++EA+
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFH--TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 393 IESAEVDHGLC-----LWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAY---VLLSS 444
E E+ C + L+ HR D +++ E + + Y +LLS
Sbjct: 455 FE--EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 445 IYTALGQWEDVELVRRMMKARGVAKEPGC 473
++ E ++L MM +G+ C
Sbjct: 513 MFKEHRNEEALKLW-DMMIDKGITPTAAC 540
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 9/235 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ GY G ++A+E M E + +T I + ++F + K
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK- 321
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE---FSGNK-NSITWSAMVTGYAQSGDSEKA 116
G+ + ++ K G L++ FE G+K N ++ ++ GYA+SG E A
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+RL H M G P T V+N + E G + SSL+D
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG 441
Query: 177 YAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
K G + +A R FE + + D + ++I + ++ + A+ L+ +M+ E
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 37/325 (11%)
Query: 47 LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSA 102
L+ G V ++ G V++ L+ YAK GS++DA+R + + +T+S
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 103 MVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG 162
+V G ++G E+AL FH+ G+ + +I+ + E ++ + G
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 163 FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPD-----VVLWTSIITGYVQNGDFEGA 217
Y ++L+D + K + +A F+ +++ + V +T +++G + E A
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 218 LNLYGKMQIERIIPNELTMAS----------VLKACSSLAALDQGKQMHAGIIKYGFNLE 267
L L+ M + I P + V +AC L L + + N
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTL 582
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALEL------ 321
G A G + G + R+ T MI+ L + G + A++L
Sbjct: 583 CKAGRIKEACKLADGITERGREVPGRIRT-------VMINALRKVGKADLAMKLMHSKIG 635
Query: 322 --FDKMLLEGTKPDTVTFVNLLSAC 344
+++M G+ V F LL C
Sbjct: 636 IGYERM---GSVKRRVKFTTLLETC 657
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 152/377 (40%), Gaps = 67/377 (17%)
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSI-----------VSVANALVTLYAKCG 80
FVL ++ T+ LD R V + G++S + VA+ L++L CG
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 81 SLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVIN 140
N +T+ ++ G+ + G+ ++A LF M G+ P
Sbjct: 282 P------------APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP---------- 319
Query: 141 ACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP---- 196
L S+L+D Y K G L + F
Sbjct: 320 -------------------------DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
DVV+++S I YV++GD A +Y +M + I PN +T ++K + + M+
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLSQN 312
I+K G + S+L + KCG+L G+ ++ M DV+ + ++ GLS+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
G A+ KML + + + V F +L+ + D F++M + I P V
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG-IYGIKPDVAT 533
Query: 373 YACMVDILSRAGKLNEA 389
+ ++ + G+L EA
Sbjct: 534 FTTVMRVSIMEGRLEEA 550
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/522 (19%), Positives = 217/522 (41%), Gaps = 55/522 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSD-LNRTEFLDTGRQVHSLAMK 59
+++G+ G A +LF+ M E+ E + + S L D + L G ++ S A+
Sbjct: 292 LINGFCKRGEMDRAFDLFKVM--EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEF----SGNKNSITWSAMVTGYAQSGDSEK 115
G+ V V ++ + +Y K G L A ++ + N +T++ ++ G Q G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINA---CSDLCA----------------------IVE 150
A ++ + G+ PS T +I+ C +L + +V+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 151 GRQMHG-------YSLKL---GFGLQLYVLSSLVDMYAKCGSLADARRGFE----YVQQP 196
G G +S+K+ L + V +SL+D + + +A + F Y +P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
DV +T+++ + G E AL L+ +M + P+ L +++ A G Q+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQN 312
+ + + ++ V + + + KC ++D F + D++++N MI G
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
++A +F+ + + P+TVT L+ +D F +M+++ P
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPNAVT 708
Query: 373 YACMVDILSRAGKLNEAKEFIESAE---VDHGLCLWRILLGG-CRNHRNYDIGAYAGEKL 428
Y C++D S++ + + + E + + + + I++ G C+ R + + +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 429 MELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKE 470
P+ AY +L Y +G+ + L+ M GV +
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF----EFSGNKNSITWSAMVT 105
G Q+ L +N + + ++V N ++ L KC ++DA + F E + +T++ M+
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 106 GYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGL 165
GY ++A R+F + + P+ TL +I+ + +M + G
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 166 QLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLY 221
L+D ++K + + + FE +Q+ P +V ++ II G + G + A N++
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 222 GKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALS 275
+ +++P+ + A +++ + L + ++ +++ G + + ALS
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 818
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 138/309 (44%), Gaps = 24/309 (7%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC-------AIVE 150
+T+++++ G+ E+A+ + + M G+ P +I++ LC A+
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS---LCKNGHVNYALSL 199
Query: 151 GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADAR---RGFEYVQ-QPDVVLWTSIIT 206
QM Y G + + +SLV+ G DA RG + +PDV+ + ++I
Sbjct: 200 FDQMENY----GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
+V+ G F A LY +M I PN T S++ +D+ +QM + G
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLSQNGHGNKALELF 322
+V ++L + KC +DD IF+ M T + I++ +I G Q G N A E+F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK-MMSDEFD-ITPTVEHYACMVDIL 380
M+ G P+ T+ LL + G V + F+ M E D + P + Y ++ L
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 381 SRAGKLNEA 389
GKL +A
Sbjct: 436 CYNGKLEKA 444
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/353 (18%), Positives = 143/353 (40%), Gaps = 50/353 (14%)
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGN----KNSITWSAMVTGYAQSGDSEKA 116
G+ V + ++ K G ++ AL F+ N + + ++++V G SG A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L M + P T +I+A ++ +++ +++ ++ +SL++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ G + +AR+ F ++ PDVV +TS+I G+ + + A+ ++ +M + + N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T ++++ + + +++ + ++ G + + L G + +IF
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 293 RMPTR-------DVISWNAMISGLSQNGHGNKALELFDKMLL------------------ 327
M R ++ ++N ++ GL NG KAL +F+ M
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 328 -----------------EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
+G KP+ VT+ ++S GL F+ M ++
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 18/297 (6%)
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL 173
+AL LF M S LPS ++N + + + + +G LY + L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 174 VDMYAKCGS--LADA------RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQ 225
++ + + LA + + GFE PD+V +TS+I G+ E A+++ +M
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFE----PDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 226 IERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLD 285
I P+ + +++ + ++ + + YG +V + ++L G
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 286 DGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLL 341
D + M R DVI++NA+I + G A EL+++M+ P+ T+ +L+
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 342 SACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA-KEFIESAE 397
+ G VD F +M + P V Y +++ + K+++A K F E ++
Sbjct: 290 NGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 200/517 (38%), Gaps = 93/517 (17%)
Query: 32 FVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSI-----------VSVANALVTLYAKCG 80
FVL ++ T+ LD R V + G++S + VA+ L++L CG
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 81 SLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVIN 140
N +T+ ++ G+ + G+ ++A LF M G+ P
Sbjct: 282 P------------APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP---------- 319
Query: 141 ACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP---- 196
L S+L+D Y K G L + F
Sbjct: 320 -------------------------DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
DVV+++S I YV++GD A +Y +M + I PN +T ++K + + M+
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLSQN 312
I+K G + S+L + KCG+L G+ ++ M DV+ + ++ GLS+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITP---- 368
G A+ KML + + + V F +L+ + D F++M + I P
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG-IYGIKPDVAT 533
Query: 369 --TVEHYACMVDILSRAGKLNEAKEFIE-----SAEVDHGLCLWRI-LLGGCRNHRNYDI 420
TV + M D + K + + D +C I LL C HR D
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC--HRIEDA 591
Query: 421 GAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKS 480
+ + P+ Y + Y +L + ++ E + ++K G + + L
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF----GPNTVTLTI 647
Query: 481 LVHVFVVGDSMHPQIDEIRSELRLLTKLMKDEGYQPH 517
L+HV + M I R+ + +M ++G +P+
Sbjct: 648 LIHVLCKNNDMDGAI-------RMFS-IMAEKGSKPN 676
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 195/451 (43%), Gaps = 59/451 (13%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSD-LNRTEFLDTGRQVHSLAMK 59
+++G+ G A +LF+ M E+ E + + S L D + L G ++ S A+
Sbjct: 292 LINGFCKRGEMDRAFDLFKVM--EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 60 NGLLSIVSVANALVTLYAKCGSLDDALRTFEF----SGNKNSITWSAMVTGYAQSGDSEK 115
G+ V V ++ + +Y K G L A ++ + N +T++ ++ G Q G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 116 ALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
A ++ + G+ PS T +I+ + G ++ +K+G+ + + LVD
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 176 MYAKCGSLADARR-GFEYVQQP---DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
+K G + A R + + Q +VV++ S+I G+ + F+ AL ++ M I I P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 232 NELTMASVLKA-------CSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ T +V++ C + G Q+ + + + ++ V + + + KC +
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 285 DDGYLIFWRMPT----RDVISWNAMISG-------------------------------- 308
+D F + D++++N MI G
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 309 ---LSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFD 365
L +N + A+ +F M +G+KP+ VT+ L+ S ++ + F+ M ++
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-G 707
Query: 366 ITPTVEHYACMVDILSRAGKLNEAKEFIESA 396
I+P++ Y+ ++D L + G+++EA A
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 153/347 (44%), Gaps = 19/347 (5%)
Query: 35 TSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALR-TFEFSG 93
+S++ + L +G ++ +K G V + LV +K G + A+R + + G
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 94 NK---NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLP--SEFTLVGVINACSD-LCA 147
N + +++++ G+ + ++AL++F M G+ P + FT V ++ D C
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 148 IVE---GRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF----EYVQQPDVVL 200
++ G Q+ + + V + ++ + KC + DA + F E +PD+V
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 201 WTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGII 260
+ ++I GY + A ++ +++ PN +T+ ++ +D +M + +
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 261 KYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGN 316
+ G L ++K ++ + +F M + ++S++ +I GL + G +
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 317 KALELFDKMLLEGTKPDTVTFVNLLSACSHMG-LVDRGWDYFKMMSD 362
+A +F + + PD V + L+ +G LV+ Y M+ +
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 126/288 (43%), Gaps = 13/288 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRC----EEEEGENEFVLTSILSDLNRTEFLDT-GRQVHS 55
++ G+ L EA+++F M + + SI+ D T G Q+
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF----EFSGNKNSITWSAMVTGYAQSG 111
L +N + + ++V N ++ L KC ++DA + F E + +T++ M+ GY
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
++A R+F + + P+ TL +I+ + +M + G
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 172 SLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
L+D ++K + + + FE +Q+ P +V ++ II G + G + A N++ +
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALS 275
+++P+ + A +++ + L + ++ +++ G + + ALS
Sbjct: 742 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 789
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 204/477 (42%), Gaps = 70/477 (14%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTE-FLDTGRQVHSLAMK 59
++S YA +G+A++A+E F +M+ E + + F IL + R E F V++ +K
Sbjct: 133 LISAYAKMGMAEKAVESFGRMK-EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 60 -NGLLSIVSVANALVTLYAKCGSLDDALRTF-EFSG---NKNSITWSAMVTGYAQSGDSE 114
N ++ + + LY K G DA + F + +G + N +T++ +++G Q G ++
Sbjct: 192 CNCSPNLYTFGILMDGLYKK-GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
A +LF+ M SG P +++ L +VE ++ K GF L L SSL+
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 175 DMYAKCGSLADARR---GFEYVQ-------QPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
D L ARR FE +PD++L+T +I G + G E AL L M
Sbjct: 311 D------GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 225 QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ I P+ +V+KA L++G+ + + + + + L + G +
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 285 DDGYLIFWRMP----TRDVISWNAMISGLSQNGHGNKALELFDKM--------------- 325
+ IF + + V ++NA+I GL ++G +A L KM
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 326 -------LLE-----------------GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMS 361
++E G+ PD V++ L++ G +D ++
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 362 DEFDITPTVEHYACMVDILSRAGKLNEA-KEFIESAEVDHGLCLWRILLG-GCRNHR 416
+ ++P Y +++ L R G+ EA K F + H ++R L+ CR +
Sbjct: 545 LK-GLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRK 600
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 10/311 (3%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINAC-SDLCAIVEGRQM 154
+S + +++ YA+ G +EKA+ F M P FT ++ + + +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 155 HGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQ 210
+ LK LY L+D K G +DA++ F+ + P+ V +T +I+G Q
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 211 NGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPV 270
G + A L+ +MQ P+ + ++L L + + ++ K GF L +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 271 GSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKML 326
S+L + + ++ M + D+I + +I GLS+ G AL+L M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 327 LEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKL 386
+G PDT + ++ A GL++ G MS E + P + ++ + R G +
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS-ETESFPDACTHTILICSMCRNGLV 424
Query: 387 NEAKEFIESAE 397
EA+E E
Sbjct: 425 REAEEIFTEIE 435
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
++ ++ ++ GL + G + A ++FD M G P+ VT+ L+S G D F
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH---GLCLWRILLGGCRN 414
M + +V H A ++D + G++ EA E + E D GL + L+ G
Sbjct: 257 YEMQTSGNYPDSVAHNA-LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 415 HRNYDIGAYAGEKLMELG-SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGC 473
R Y +++ P+ Y +L + G+ ED + M ++G++ + C
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 474 SWIELKSL 481
+K+L
Sbjct: 376 YNAVIKAL 383
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 166/374 (44%), Gaps = 42/374 (11%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFH 121
V N L+ + G++D AL F+ K N +T++ ++ GY + + +L
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL------GFGLQLYVLSSLVD 175
SM G+ P+ + VIN LC EGR M S L G+ L ++L+
Sbjct: 265 SMALKGLEPNLISYNVVING---LCR--EGR-MKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 176 MYAKCGSLADA--------RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
Y K G+ A R G P V+ +TS+I + G+ A+ +M++
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGL----TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
+ PNE T +++ S +++ ++ + GF+ V +AL + G ++D
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 288 YLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+ M + DV+S++ ++SG ++ ++AL + +M+ +G KPDT+T+ +L+
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 344 CSHMGLVDRGWDYFKMM------SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE 397
D ++ M DEF T + Y CM L +A +L+ E +E
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY-CMEGDLEKALQLH--NEMVEKG- 550
Query: 398 VDHGLCLWRILLGG 411
V + + +L+ G
Sbjct: 551 VLPDVVTYSVLING 564
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 171/425 (40%), Gaps = 68/425 (16%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSV 68
G A+E +QMR NE T+++ ++ +++ +V NG V
Sbjct: 359 GNMNRAMEFLDQMRVRGL-CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 69 ANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFHSMH 124
NAL+ + G ++DA+ E K + +++S +++G+ +S D ++ALR+ M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 125 CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLA 184
G+ P T +I + E ++ L++G
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL--------------------- 516
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
PD +T++I Y GD E AL L+ +M + ++P+ +T + ++ +
Sbjct: 517 ----------PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
+ + K++ ++K + VP + C +++ + V+S
Sbjct: 567 KQSRTREAKRL---LLKLFYEESVPSDVTYHTLIENCSNIE----------FKSVVS--- 610
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEF 364
+I G G +A ++F+ ML + KPD + ++ G + + + +K M
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 365 DITPTVEHYACMVDILSRAGKLNEAKEFI-------ESAEVDHGLCLWRILLGGCRNHR- 416
+ TV A +V L + GK+NE I E +E + L I NHR
Sbjct: 671 FLLHTVTVIA-LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI------NHRE 723
Query: 417 -NYDI 420
N D+
Sbjct: 724 GNMDV 728
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 161/377 (42%), Gaps = 63/377 (16%)
Query: 53 VHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYA 108
+H+ +++GL V +L+ K G+++ A+ + + N T++ +V G++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINA-C-----SDLCAIVEGRQMHGYSLKL- 161
Q G +A R+ M+ +G PS T +IN C D A++E + G S +
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLY 221
+ VLS Y +L R E +PD + ++S+I G+ + + A +LY
Sbjct: 452 SYST---VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 222 GKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKC 281
+M + P+E T +++ A L++ Q+H +++ G
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV----------------- 551
Query: 282 GSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLL 341
+P DV++++ +I+GL++ +A L K+ E + P VT+ L+
Sbjct: 552 ------------LP--DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 342 SACSHMGL-----VDRGWDYFKMMSDEFDI---------TPTVEHYACMVDILSRAGKLN 387
CS++ + +G+ MM++ + P Y M+ RAG +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 388 EA----KEFIESAEVDH 400
+A KE ++S + H
Sbjct: 658 KAYTLYKEMVKSGFLLH 674
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 150/378 (39%), Gaps = 66/378 (17%)
Query: 97 SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG 156
S + +V Y++ +KAL + H G +P GV++ + L A + ++
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP------GVLSYNAVLDATIRSKR--- 184
Query: 157 YSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEG 216
+ F ++ + E P+V + +I G+ G+ +
Sbjct: 185 ---NISFAENVF------------------KEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 217 ALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA 276
AL L+ KM+ + +PN +T +++ L +D G ++ + G + + +
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 277 MYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
+ G + + + M R D +++N +I G + G+ ++AL + +ML G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 333 DTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
+T+ +L+ + G ++R ++ M + P Y +VD S+ G +NEA
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEA--- 399
Query: 393 IESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQW 452
+R+L R + + SP Y L + + G+
Sbjct: 400 ------------YRVL-------REMNDNGF---------SPSVVTYNALINGHCVTGKM 431
Query: 453 EDVELVRRMMKARGVAKE 470
ED V MK +G++ +
Sbjct: 432 EDAIAVLEDMKEKGLSPD 449
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 155/329 (47%), Gaps = 12/329 (3%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+ +S +++ A+S + + + LFH M G+ ++ VIN V + G
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGD 213
+K G+ + +SSL++ + + + DA + E +PDVV++ +II G + G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKA-CSSLAALDQGKQMHAGIIKYGFNLEVPVGS 272
A+ L+ +M+ + + + +T S++ C S D + M +++ V +
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFT 248
Query: 273 ALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLE 328
A+ ++ K G + ++ M R DV ++N++I+GL +G ++A ++ D M+ +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G PD VT+ L++ VD G F+ M+ + T+ Y ++ +AG+ +
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDA 367
Query: 389 AKEFIESAEVDHGLCLWRILLGG-CRNHR 416
A+E + + + ILL G C N R
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWR 396
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 163/413 (39%), Gaps = 53/413 (12%)
Query: 70 NALVTLYAKCGSLDDAL----RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
N ++ +C AL + +F + +T S+++ G+ Q A+ L M
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
G P +I+ + + + ++ + G +SLV G +D
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 186 ARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
A R + P+V+ +T++I +V+ G F A+ LY +M + P+ T S++
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR---- 297
+D+ KQM ++ G +V + L + K +D+G +F M R
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
D I++N +I G Q G + A E+F +M ++P+ T+ LL V++ F
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 358 KMMSD---EFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRN 414
+ M E DIT Y ++ + + G + +A + S C+
Sbjct: 405 ENMQKSEIELDITT----YNIVIHGMCKIGNVEDAWDLFRSL--------------SCKG 446
Query: 415 HRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGV 467
+ P+ +Y + S + QW+ +L+ R M+ G+
Sbjct: 447 LK-----------------PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 149/346 (43%), Gaps = 20/346 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
+++G+ +AI+L +M EE G + + +I+ + ++ ++
Sbjct: 145 LINGFCQGNRVFDAIDLVSKM---EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSE 114
++G+ + N+LV G DA R + N IT++A++ + + G
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
+A++L+ M V P FT +IN + E +QM + G + ++L+
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 175 DMYAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
+ + K + + + F + Q D + + +II GY Q G + A ++ +M
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--- 378
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
PN T + +L +++ + + K L++ + + K G+++D + +
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 291 FWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
F + + DV+S+ MISG + +K+ L+ KM +G P
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 182/421 (43%), Gaps = 26/421 (6%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
NAL+ + K +DDA R + +K +++T++ M+ G + AL++ + +
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
P+ T +I A + E ++ L G ++ ++++ K G +
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD- 280
Query: 186 ARRGFEYVQ-------QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS 238
R FE V+ +PDV+ + ++ + G +E L KM E+ PN +T +
Sbjct: 281 --RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 239 VLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT-- 296
++ +++ + + + G + L A + + G LD M +
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 297 --RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
D++++N +++ L +NG ++ALE+F K+ G P++ ++ + SA G R
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 355 D-YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI---ESAEVDHGLCLWRI-LL 409
+MMS+ D P Y M+ L R G ++EA E + S E + + I LL
Sbjct: 459 HMILEMMSNGID--PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 410 GGCRNHRNYDIGAYAGEKLMELGSPESSAY-VLLSSIYTALGQWEDVELVRRMMKARGVA 468
G C+ HR D + P + Y VL+ I A + E +EL +++ ++
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Query: 469 K 469
+
Sbjct: 577 E 577
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 162/370 (43%), Gaps = 21/370 (5%)
Query: 109 QSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLY 168
+SG+ ++L L +M G P +I L I + ++ K G ++
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 169 VLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKM 224
++L++ + K + DA R + ++ PD V + +I G + AL + ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 225 QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ P +T +++A +D+ ++ ++ G ++ + + K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 285 DDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNL 340
D + + + + DVIS+N ++ L G + +L KM E P+ VT+ L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 341 LSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDH 400
++ G ++ + K+M ++ +TP Y ++ R G+L+ A EF+E+ D
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 401 GLCLWRI------LLGGCRNHRNYDIGAYAGEKLMELG-SPESSAY-VLLSSIYTALGQW 452
CL I L C+N + D KL E+G SP SS+Y + S+++++ +
Sbjct: 399 --CLPDIVNYNTVLATLCKNGK-ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 453 EDVELVRRMM 462
+ ++ MM
Sbjct: 456 RALHMILEMM 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 125/320 (39%), Gaps = 76/320 (23%)
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ---QPDVVLWTSIITGYVQNGDFE 215
++ G+ + + + L+ + ++ A R E ++ QPDV + ++I G+ + +
Sbjct: 116 VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRID 175
Query: 216 GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALS 275
A + +M+ + P+ +T ++ + S LD L + V + L
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD---------------LALKVLNQL- 219
Query: 276 AMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTV 335
L D PT VI++ +I G ++AL+L D+ML G KPD
Sbjct: 220 --------LSDNC-----QPT--VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 336 TFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIES 395
T+ ++ G+VDR F++ +E C D++S
Sbjct: 265 TYNTIIRGMCKEGMVDRA----------FEMVRNLELKGCEPDVIS-------------- 300
Query: 396 AEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM-----ELGSPESSAYVLLSSIYTALG 450
+ ILL N ++ GEKLM E P Y +L + G
Sbjct: 301 ---------YNILLRALLNQGKWE----EGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 451 QWEDVELVRRMMKARGVAKE 470
+ E+ + ++MK +G+ +
Sbjct: 348 KIEEAMNLLKLMKEKGLTPD 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 9 GLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSV 68
G +EA+ L + M+ E+ + + +++ R LD + + +G L +
Sbjct: 347 GKIEEAMNLLKLMK-EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 69 ANALVTLYAKCGSLDDALRTF----EFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMH 124
N ++ K G D AL F E + NS +++ M + SGD +AL + M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 125 CSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLA 184
+G+ P E T +I+ C EG + L LVDM
Sbjct: 466 SNGIDPDEITYNSMIS-----CLCREGMVDEAFEL-------------LVDM-------- 499
Query: 185 DARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
R E+ P VV + ++ G+ + E A+N+ M PNE T +++
Sbjct: 500 ---RSCEF--HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 180/439 (41%), Gaps = 48/439 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M++GY LG +EA + ++ E + F TS++ + + LD+ +V +
Sbjct: 224 MVNGYCKLGNVEEANQYVSKI-VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSI----TWSAMVTGYAQSGDSEKA 116
G L+ +D+A+ F + T++ ++ S +A
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L L M +G+ P+ T +I++ C + R++ G L+ G + ++L++
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 177 YAKCGSLADARRGFEYVQQ--------------------------------------PDV 198
Y K G + DA E ++ PDV
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDV 462
Query: 199 VLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAG 258
V + S+I G ++G+F+ A L M ++P++ T S++ + +++ +
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 259 IIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV----ISWNAMISGLSQNGH 314
+ + G N V + +AL Y K G +D+ +L+ +M +++ +++NA+I GL +G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 315 GNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYA 374
+A L +KM+ G +P T L+ G D + F+ M P Y
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYT 641
Query: 375 CMVDILSRAGKLNEAKEFI 393
+ R G+L +A++ +
Sbjct: 642 TFIQTYCREGRLLDAEDMM 660
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/484 (20%), Positives = 207/484 (42%), Gaps = 51/484 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVL-----TSILSDLNRTEFLDTGRQVHS 55
M+ S+G A ++L +M ++E E ++ L ++L+ L R +D +QV+
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMN-KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 56 LAMKNGLLSIVSVANALVTLYAKCGSLDDA----LRTFEFSGNKNSITWSAMVTGYAQSG 111
+++ + + N +V Y K G++++A + E + + T+++++ GY Q
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
D + A ++F+ M G +E +I+ LC + ++ + L+V
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHG---LCV----------ARRIDEAMDLFVKM 314
Query: 172 SLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
+ + P V +T +I + ALNL +M+ I P
Sbjct: 315 KDDECF------------------PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
N T ++ + S ++ +++ +++ G V +AL Y K G ++D +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 292 WRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
M +R + ++N +I G ++ + +KA+ + +KML PD VT+ +L+
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 348 GLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAE---VDHGLCL 404
G D + +M+D + P Y M+D L ++ ++ EA + +S E V+ + +
Sbjct: 476 GNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 405 WRILLGGCRNHRNYDIGAYAGEKLMELGS-PESSAYVLLSSIYTALGQWEDVELVRRMMK 463
+ L+ G D EK++ P S + L A G+ ++ L+ M
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 464 ARGV 467
G+
Sbjct: 595 KIGL 598
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 137/339 (40%), Gaps = 37/339 (10%)
Query: 43 RTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF---EFSG-NKNSI 98
R+ D+ ++ SL GL+ +++ K +++A F E G N N +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 99 TWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCA---IVEGRQMH 155
++A++ GY ++G ++A + M LP+ T +I+ LCA + E +
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG---LCADGKLKEATLLE 590
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV----QQPDVVLWTSIITGYVQN 211
+K+G + + L+ K G A F+ + +PD +T+ I Y +
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA----ALDQGKQM---------HAG 258
G A ++ KM+ + P+ T +S++K L A D K+M H
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 259 IIKYGFNLEVPVGSALSAMYAKCG-----SLDDGYLIFWRM----PTRDVISWNAMISGL 309
+ LE+ G + C D + +M T + S+ +I G+
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 310 SQNGHGNKALELFDKMLL-EGTKPDTVTFVNLLSACSHM 347
+ G+ A ++FD M EG P + F LLS C +
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 150/365 (41%), Gaps = 41/365 (11%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTF 89
+++ TS++ L +++ ++ + + G+ V + AL+ Y K G +D+A
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 90 E--FSGN--KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDL 145
E S N NS+T++A++ G G ++A L M G+ P+ T +I+
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR---- 611
Query: 146 CAIVEGRQMHGYS-----LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----P 196
+ +G H YS L G + ++ + Y + G L DA +++ P
Sbjct: 612 -LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK--------------- 241
D+ ++S+I GY G A ++ +M+ P++ T S++K
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 242 ---ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRD 298
A S++ D ++ ++++ L + G+L +F M +
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 299 VIS-----WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
IS +NA++S + N+A ++ D M+ G P + L+ G +RG
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 354 WDYFK 358
F+
Sbjct: 851 TSVFQ 855
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/430 (18%), Positives = 170/430 (39%), Gaps = 44/430 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEE----EEGENEFVLTSILSDLNRTEFLDTGRQVHSL 56
+++GY G+ ++A+++ E M + NE + S++++ V +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK------AMGVLNK 452
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSI----TWSAMVTGYAQSGD 112
++ +L V N+L+ + G+ D A R ++ + T+++M+ +S
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 113 SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS 172
E+A LF S+ GV P+ +I+ + E M L ++
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 173 LVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
L+ G L +A + + QP V T +I +++GDF+ A + + +M
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
P+ T + ++ L + M A + + G + ++ S+L Y G + +
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 289 LIFWRM------PTRDVISWNAMISGLSQNGHGNK------------------ALELFDK 324
+ RM P++ ++ ++I L + +G + +EL +K
Sbjct: 693 DVLKRMRDTGCEPSQH--TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 325 MLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAG 384
M+ P+ ++ L+ +G + F M I+P+ + ++ +
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 385 KLNEAKEFIE 394
K NEA + ++
Sbjct: 811 KHNEAAKVVD 820
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 22/276 (7%)
Query: 71 ALVTLYAKCGSLDDA----LRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCS 126
+ Y + G L DA + E + + T+S+++ GY G + A + M +
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 127 GVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADA 186
G PS+ T + +I L + G+Q G +L + ++V++ K
Sbjct: 702 GCEPSQHTFLSLI---KHLLEMKYGKQ-KGSEPELCAMSNMMEFDTVVELLEK------- 750
Query: 187 RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI-ERIIPNELTMASVLKACSS 245
E+ P+ + +I G + G+ A ++ MQ E I P+EL ++L C
Sbjct: 751 --MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT----RDVIS 301
L ++ ++ +I G ++ L K G + G +F + D ++
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
W +I G+ + G ELF+ M G K + T+
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/528 (20%), Positives = 211/528 (39%), Gaps = 58/528 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+L+ +G EA+++FE+M+ ++ N ++ L R LDT ++ K
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMK--KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
GL V N +V K LD+A FE K + IT+ +++ G + G + A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+++ M S + +I + +G +++ + L +L++ +D
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 177 YAKCGSLADARRGFEYVQQ----PDV-------------------------------VL- 200
K G R FE ++ PD VL
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 201 ---WTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHA 257
+ +I G+ + G A L +M+ + P +T SV+ + + LD+ +
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 258 GIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLSQNG 313
L V + S+L + K G +D+ YLI + T ++ +WN+++ L +
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 314 HGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHY 373
N+AL F M P+ VT+ L++ + ++ + +++ M + + P+ Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISY 765
Query: 374 ACMVDILSRAGKLNEAKEFIESAEVDHGL----CLWRILLGGCRNHRNYDIGAYAGEKLM 429
M+ L++AG + EA + + + G+ C ++ G +R D + E+
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF-EETR 824
Query: 430 ELGSP--ESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSW 475
G P + VLL +++ E +V +++ G A+ SW
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKN-DCLEQAAIVGAVLRETGKARHAARSW 871
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 170/399 (42%), Gaps = 25/399 (6%)
Query: 13 EAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
EA+E+FE + + + +++ D + G + V N +
Sbjct: 291 EAVEMFEHLE-KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 73 VTLYAKCGSLDDALRTFE---FSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
+T K G +D+AL+ FE N T++ ++ ++G + A L SM +G+
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 130 PSEFTL-VGVINACS-----DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSL 183
P+ T+ + V C + CA+ E K+ ++ SL+D K G +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFE-----EMDYKVCTPDEI-TFCSLIDGLGKVGRV 463
Query: 184 ADARRGFEYVQQPDV----VLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASV 239
DA + +E + D +++TS+I + +G E +Y M + P+ + +
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 240 LKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR-- 297
+ ++G+ M I F + S L K G ++ Y +F+ M +
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 298 --DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD 355
D ++N +I G + G NKA +L ++M +G +P VT+ +++ + + +D +
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 356 YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
F+ + I V Y+ ++D + G+++EA +E
Sbjct: 644 LFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 161/354 (45%), Gaps = 32/354 (9%)
Query: 70 NALVTLYAKC---GSLDDALRTFEFSGNKNSI-TWSAMVTGYAQSGDSEKALRLFHSMHC 125
N+L+ + A+C +LD L +G S+ T MV G ++ + + M
Sbjct: 102 NSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK 161
Query: 126 SGVLPS---EFTLVGVINAC--SDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
P+ TL+G +A SD+ + +QM +LG+ +++ ++L+ +AK
Sbjct: 162 FKFRPAFSAYTTLIGAFSAVNHSDM-MLTLFQQMQ----ELGYEPTVHLFTTLIRGFAKE 216
Query: 181 GSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
G + A + ++ D+VL+ I + + G + A + +++ + P+E+T
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAM---YAKCGSLDDGYLIFWR 293
S++ LD+ +M + K N VP A + M Y G D+ Y + R
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEK---NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 294 MPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
+ VI++N +++ L + G ++AL++F++M + P+ T+ L+ G
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGK 392
Query: 350 VDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC 403
+D ++ M + + P V MVD L ++ KL+EA E E+D+ +C
Sbjct: 393 LDTAFELRDSMQ-KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE--EMDYKVC 443
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 133/309 (43%), Gaps = 14/309 (4%)
Query: 99 TWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYS 158
++++++ A+ + + ++ M +G PS T + ++ C + EG +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDF 214
K F ++L+ ++ F+ +Q+ P V L+T++I G+ + G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
+ AL+L +M+ + + + + + + +D + I G + +++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 275 SAMYAKCGSLDDGYLIF------WRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLE 328
+ K LD+ +F R+P ++N MI G G ++A L ++ +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPC--TYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 329 GTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNE 388
G+ P + + +L+ MG VD F+ M D P + Y ++D+L RAGKL+
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDT 395
Query: 389 AKEFIESAE 397
A E +S +
Sbjct: 396 AFELRDSMQ 404
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 150/346 (43%), Gaps = 14/346 (4%)
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE----FSGNKNSITWSAMVTGYAQSGDSEKA 116
G V + L+ +AK G +D AL + S + + + ++ + + + G + A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+ FH + +G+ P E T +I + E +M + K Y ++++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
Y G +A E + P V+ + I+T + G + AL ++ +M+ + PN
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPN 376
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF- 291
T ++ LD ++ + K G V + + K LD+ +F
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 292 ---WRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
+++ T D I++ ++I GL + G + A ++++KML + +++ + +L+ + G
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+ G +K M ++ + +P ++ +D + +AG+ + + E
Sbjct: 497 RKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 203/441 (46%), Gaps = 57/441 (12%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLT--SILSDLNRTEFLDTGRQVHSLAM 58
++S Y+S GL +EA EL M +G + V T ++++ L + + ++V + +
Sbjct: 276 LISAYSSKGLMEEAFELMNAM---PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSIT----WSAMVTGYAQSGDSE 114
++GL + +L+ K G + + + F +++ + +S+M++ + +SG+ +
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 115 KALRLFHSMHCSGVLPSE--FTLV-------GVINACSDL--------CA--------IV 149
KAL F+S+ +G++P +T++ G+I+ +L CA I+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 150 EG---RQMHGYSLKL-------GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQP--- 196
G R+M G + KL Y L+ L+D + K G+L +A F+ +++
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 197 -DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
DVV + +++ G+ + GD + A ++ M + I+P ++ + ++ A S L + ++
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQ 311
+I V + +++ Y + G+ DG +M + D IS+N +I G +
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 312 NGHGNKALELFDKMLLE--GTKPDTVTFVNLLSA-CSHMGLVDRGWDYFKMMSDEFDITP 368
+ +KA L KM E G PD T+ ++L C + + KM+ E + P
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI--ERGVNP 690
Query: 369 TVEHYACMVDILSRAGKLNEA 389
Y CM++ L EA
Sbjct: 691 DRSTYTCMINGFVSQDNLTEA 711
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 206/493 (41%), Gaps = 35/493 (7%)
Query: 28 GENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALR 87
G N + L +++ L + ++ S + G+ + N L++ Y+ G +++A
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 88 TFEFSGNKN----SITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACS 143
K T++ ++ G + G E+A +F M SG+ P T ++
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 144 DLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVV 199
+VE ++ L SS++ ++ + G+L A F V++ PD V
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 200 LWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGI 259
++T +I GY + G A+NL +M + + +T ++L L + ++ +
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 260 IKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHG 315
+ + + L + K G+L + +F +M + DV+++N ++ G + G
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 316 NKALELFDKMLLEGTKPDTVTF---VNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
+ A E++ M+ + P +++ VN L + H+ R WD +M+S +I PTV
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD--EMISK--NIKPTVMI 587
Query: 373 YACMVDILSRAGKLNEAKEFIESAEVDHGL---CL-WRILLGGCRNHRNYDIGAYAGEKL 428
M+ R+G ++ + F+E + G C+ + L+ G N A+ K
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKM-ISEGFVPDCISYNTLIYGFVREENMS-KAFGLVKK 645
Query: 429 MELGS----PESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGC------SWIEL 478
ME P+ Y + + Q ++ E+V R M RGV + ++
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 479 KSLVHVFVVGDSM 491
+L F + D M
Sbjct: 706 DNLTEAFRIHDEM 718
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 150/371 (40%), Gaps = 43/371 (11%)
Query: 63 LSIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHS 122
+S + + N+L + ++ CGS N + ++ Y Q+ +A F
Sbjct: 145 VSRLEIVNSLDSTFSNCGS--------------NDSVFDLLIRTYVQARKLREAHEAFTL 190
Query: 123 MHCSGVLPSEFTLVGVINACSDLCA-------IVEGRQMHGYSLKLGFGLQLYVLSSLVD 175
+ G S I+AC+ L + ++ + G G+ +Y L+ +V+
Sbjct: 191 LRSKGFTVS-------IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243
Query: 176 MYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
K G + VQ+ PD+V + ++I+ Y G E A L M + P
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
T +V+ ++ K++ A +++ G + + +L K G + + +F
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 292 WRMPTRDVIS----WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHM 347
M +RDV+ +++M+S +++G+ +KAL F+ + G PD V + L+
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 348 GLVDRGWDYFKMMSDE---FDITP--TVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
G++ + M + D+ T+ H C +L A KL E E A
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL--FNEMTERALFPDSY 481
Query: 403 CLWRILLGGCR 413
L ++ G C+
Sbjct: 482 TLTILIDGHCK 492
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 157/367 (42%), Gaps = 51/367 (13%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFE----FSGNKNSITWSAMVTGYAQSGDSEKALRLFH 121
V V N L+ + K G++ DA + F+ S ++++ ++ GY + G+ ++ RL H
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY---SLKLGFGLQLYVLSSLVDMYA 178
M S P FT +INA LC + HG K G + ++L+ ++
Sbjct: 300 QMEKSRTRPDVFTYSALINA---LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 179 KCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
+ G + + ++ + QPD+VL+ +++ G+ +NGD A N+ M + P+++
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
T +++ ++ ++ + + G L
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIEL---------------------------- 448
Query: 295 PTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGW 354
D + ++A++ G+ + G A +ML G KPD VT+ ++ A G G+
Sbjct: 449 ---DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLC----LWRILLG 410
K M + + P+V Y +++ L + G++ A ++ A ++ G+ + LL
Sbjct: 506 KLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLD-AMLNIGVVPDDITYNTLLE 563
Query: 411 GCRNHRN 417
G H N
Sbjct: 564 GHHRHAN 570
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 26/373 (6%)
Query: 30 NEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALR-- 87
N +V +++ + + ++V K L V N L+ Y K G+LD+ R
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 88 -TFEFSGNKNSI-TWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDL 145
E S + + T+SA++ + + A LF M G++P++ +I+ S
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADA--------RRGFEYVQQPD 197
I ++ + L G + + ++LV+ + K G L A RRG +PD
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL----RPD 414
Query: 198 VVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMAS-VLKACSSLAALDQGKQMH 256
+ +T++I G+ + GD E AL + +M I + + ++ V C +D + +
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQN 312
+++ G + + + + K G G+ + M + V+++N +++GL +
Sbjct: 475 E-MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
G A L D ML G PD +T+ LL H + Y + E I +
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQ--KPEIGIVADLAS 589
Query: 373 YACMVDILSRAGK 385
Y +V+ L RA K
Sbjct: 590 YKSIVNELDRASK 602
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 8/210 (3%)
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDF 214
L GF L +YV + L++ + K G+++DA++ F+ + QP VV + ++I GY + G+
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 215 EGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
+ L +M+ R P+ T ++++ A +D + + K G + + L
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 275 SAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
+++ G +D + +M ++ D++ +N +++G +NG A + D M+ G
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+PD +T+ L+ G V+ + K M
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEM 441
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 137/307 (44%), Gaps = 23/307 (7%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHG- 156
+T +++ G+ Q ++A+ L SM G +P+ VIN LC + R ++
Sbjct: 150 VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING---LC---KNRDLNNA 203
Query: 157 ----YSL-KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITG 207
Y + K G ++L+ + G DA R + + P+V+ +T++I
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 208 YVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
+V+ G+ A NLY +M ++PN T S++ L K M ++ G +
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 268 VPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFD 323
V + L + K ++DG +F M + D ++N +I G Q G N A ++F+
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 324 KMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK-MMSDEFDITPTVEHYACMVDILSR 382
+M+ G PD VT+ LL + G +++ + + E D+ + Y ++ L R
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV--DIITYNIIIQGLCR 441
Query: 383 AGKLNEA 389
KL EA
Sbjct: 442 TDKLKEA 448
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
G + V + N ++ K L++AL F K +++T++ +++G + SG A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
RL M + P+ +I+ ++E R ++ ++ ++ +SL++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ G L DA+ F+ + PDVV + ++ITG+ ++ E + L+ +M + ++ +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
T +++ L+ +++ ++ G + ++ + L G ++ ++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
+ D+I++N +I GL + +A LF + +G KPD + ++ ++S G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 349 L 349
L
Sbjct: 479 L 479
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 175/390 (44%), Gaps = 40/390 (10%)
Query: 34 LTSILSDLNRTEFLDTGRQVHSLAMKN-GLLSIVSVA--------------NALVTLYAK 78
L+ + N + + +H L N G+LS+ +A N++V+ K
Sbjct: 9 LSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCK 68
Query: 79 CGSL---DDALRTF-EFSGNKNSITWSAMVTGYAQSGDSEKA------LRLFHSMHCSGV 128
G + +D + + F + I++++++ G+ ++GD A LR H C
Sbjct: 69 LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICK-- 126
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
P + + N S + + E G LK + S+ +D + K G L A +
Sbjct: 127 -PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC-SPNVVTYSTWIDTFCKSGELQLALK 184
Query: 189 GFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
F +++ P+VV +T +I GY + GD E A++LY +M+ R+ N +T +++
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVI 300
+ + ++M++ +++ V + + + + G D+ +M + D+
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 301 SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWD-YFKM 359
++ +ISGL NG +A E+ + M PD V F +++A G + + Y K+
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 360 MSDEFDITPTVEHYACMVDILSRAGKLNEA 389
+ F+ P V + M+D +++ G+L+EA
Sbjct: 365 IERGFE--PDVVALSTMIDGIAKNGQLHEA 392
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 31/297 (10%)
Query: 66 VSVANALVTLYAKCGSLDDA----LRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFH 121
V AL+ + K G + A R E NS+ ++ ++ G+ Q GDS+ A++
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCA---IVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
M G + + T GVI S LC + E ++ K + + +++++ Y
Sbjct: 293 KMLNQG-MRLDITAYGVI--ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 179 KCGSLADA--------RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
K G + A RGFE PDVV +++I G +NG A+ + IE+
Sbjct: 350 KSGRMKAAVNMYHKLIERGFE----PDVVALSTMIDGIAKNGQLHEAIVYFC---IEK-- 400
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
N++ ++ A + +++ + I + G + + ++ A K G+L D + +
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 291 FWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
RM D++++ +I GL+ G +A ++FD+ML G PD+ F L+ A
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 124/288 (43%), Gaps = 10/288 (3%)
Query: 73 VTLYAKCGSLDDALRTFEF----SGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
+ + K G L AL++F + + N +T++ ++ GY ++GD E A+ L+ M +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
+ T +I+ + +M+ ++ V ++++D + + G +A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 189 GFEYV----QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACS 244
+ + D+ + II+G NG + A + M+ ++P+ + +++ A
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 245 SLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNA 304
+ M+ +I+ GF +V S + AK G L + + F DV+ +
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM-YTV 408
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA-CSHMGLVD 351
+I L + G + LF K+ G PD + + ++ C LVD
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 127/310 (40%), Gaps = 16/310 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ G+ G + A E++ +M E+ N V T+I+ + D + + +
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRM-VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNKN----SITWSAMVTGYAQSGDSEKA 116
G+ ++ +++ G L +A E + + ++ M+ Y +SG + A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL-SSLVD 175
+ ++H + G P L +I+ I + Q+H + V+ + L+D
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDG------IAKNGQLHEAIVYFCIEKANDVMYTVLID 411
Query: 176 MYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIP 231
K G + R F + + PD ++TS I G + G+ A L +M E ++
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIF 291
+ L +++ +S + + +Q+ ++ G + + V L Y K G++ +
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Query: 292 WRMPTRDVIS 301
M R +++
Sbjct: 532 LDMQRRGLVT 541
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 15/348 (4%)
Query: 64 SIVSVANALVTLYAKCGSLDDALRTFEFSGNKNSI-----TWSAMVTGYAQSGDSEKALR 118
S VSV N +V + K G ++DAL + N++ T++ +V G ++G + A+
Sbjct: 258 SNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 119 LFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYA 178
+ M G P +T VI+ L + E ++ + ++L+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 179 KCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNEL 234
K + +A + PDV + S+I G + A+ L+ +M+ + P+E
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 235 TMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM 294
T ++ + S LD+ M + G V + L + K + IF M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 295 P----TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
+R+ +++N +I GL ++ A +L D+M++EG KPD T+ +LL+ G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 351 DRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEV 398
+ D + M+ P + Y ++ L +AG++ A + + S ++
Sbjct: 557 KKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 174/425 (40%), Gaps = 57/425 (13%)
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE----FSGNKNSITWSAMVTGYAQSGDSEKA 116
G+ VS N L+ + L A+ E + + T++ ++ GY + GD + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQ------MHGYSLKLGFGLQLYVL 170
LR+ M G S ++ +++ C EGR + S + GF Y
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHG---FCK--EGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 171 SSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
++LV+ K G + A + + Q PDV + S+I+G + G+ + A+ + +M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 227 ERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDD 286
PN +T +++ +++ ++ + G
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI---------------------- 396
Query: 287 GYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
+P DV ++N++I GL + A+ELF++M +G +PD T+ L+ +
Sbjct: 397 -------LP--DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 347 MGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL---- 402
G +D + K M + +V Y ++D +A K EA+E + EV HG+
Sbjct: 448 KGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV-HGVSRNS 505
Query: 403 CLWRILLGG-CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRM 461
+ L+ G C++ R D + +ME P+ Y L + + G + + +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 462 MKARG 466
M + G
Sbjct: 566 MTSNG 570
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 142/338 (42%), Gaps = 40/338 (11%)
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
PD +T+++ GY++ GD +GAL + +M V CS +
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQM--------------VEFGCS-------WSNV 260
Query: 256 HAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHG 315
+I +GF E V AL+ + + S DG+ D ++N +++GL + GH
Sbjct: 261 SVNVIVHGFCKEGRVEDALN--FIQEMSNQDGFF-------PDQYTFNTLVNGLCKAGHV 311
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC 375
A+E+ D ML EG PD T+ +++S +G V + M D +P Y
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNT 370
Query: 376 MVDILSRAGKLNEAKEF---IESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG 432
++ L + ++ EA E + S + +C + L+ G RN+ + E++ G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 433 -SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSM 491
P+ Y +L + G+ ++ + + M+ G A+ S I +L+ F +
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR----SVITYNTLIDGFCKANKT 486
Query: 492 HPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGD 529
+ +EI E+ + Y +D L +S D
Sbjct: 487 R-EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 142/367 (38%), Gaps = 42/367 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++SG LG KEA+E+ +QM + N +++S L + ++ ++ +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
G+L V N+L+ + A+ FE +K + T++ ++ G ++A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L + M SG S T +I+ E ++ G ++L+D
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 177 YAKCGSLADARRGFEYV----QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
K + DA + + + Q+PD + S++T + + GD + A ++ M P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T +++ ++ ++ I G NL
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL-------------------------- 608
Query: 293 RMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG-TKPDTVTF-VNLLSACSHMGLV 350
P ++N +I GL + +A+ LF +ML + PD V++ + C+ G +
Sbjct: 609 -TPH----AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 351 DRGWDYF 357
D+
Sbjct: 664 REAVDFL 670
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 182/457 (39%), Gaps = 55/457 (12%)
Query: 5 YASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLS 64
+ +GL +EA+ + +M+C + SIL+ L R D+ + L + GL+
Sbjct: 142 FLEMGLFEEALWVSREMKCSPDSK----ACLSILNGLVRRRRFDSVWVDYQLMISRGLVP 197
Query: 65 IVSVANALVT------LYAKCGSLDDALRTFEFSGN------------------------ 94
V + L LY+K L D + + N
Sbjct: 198 DVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF 257
Query: 95 ---------KNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDL 145
N T+SAM+ GY ++G+ +A L+ + + +LP+ +++
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 146 CAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLW 201
+V R + + +K G LYV + L+ + K G++ +A ++ PDV +
Sbjct: 318 RELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTY 377
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK 261
T +I G A L+ KM+ ERI P+ T S++ ++Q + + +
Sbjct: 378 TILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTA 437
Query: 262 YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNK 317
G + S L Y + +++ M + DV+++ A+I + + +
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMV 377
AL L+ ML G P+ TF L+ G + D+++ + + V + C++
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG-FTCLI 556
Query: 378 DILSRAGKLNEAKEF---IESAEVDHGLCLWRILLGG 411
+ L + G + A F + S + +C + +L G
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 203/489 (41%), Gaps = 31/489 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLT--SILSDLNRTEFLDTGRQVHSLAM 58
+L Y G K AIEL + M+ +G + V T ++ DL R+ + G +
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMK---SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDSE 114
K + N L+ ++ G + A + F + N +T++A++ G+ G+ +
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKL---GFGLQLYVLS 171
+AL++F+ M G+ PSE + GV+ LC E G+ +++ G + +
Sbjct: 391 EALKMFYMMEAKGLTPSEVS-YGVL--LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 172 SLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
++D K G L +A + + PD+V ++++I G+ + G F+ A + ++
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
+ PN + ++++ C + L + +++ +I G + + L K G + +
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 288 YLIFWRMPTRD-----VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
F R T D +S++ +I+G +G G KA +FD+M G P T+ +LL
Sbjct: 568 EE-FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 343 ACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA----KEFIESAEV 398
G + + K + TV Y ++ + ++G L +A E ++ + +
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTV-MYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 399 DHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS-PESSAYVLLSSIYTALGQWEDVEL 457
++ G CR + +A E P Y GQW+
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 458 VRRMMKARG 466
R M G
Sbjct: 746 FREQMDNLG 754
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 178/432 (41%), Gaps = 28/432 (6%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEG--ENEFVLTSILSDLNRTEFLDTGRQVHSLAM 58
++ G+ S G KEA+++F M E +G +E +L L + D R +
Sbjct: 379 LIDGHISEGNFKEALKMFYMM---EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 59 KNGLLSIVSVANALVTLYAKCGSLDDALRTF-EFSGN---KNSITWSAMVTGYAQSGDSE 114
+NG+ ++ K G LD+A+ E S + + +T+SA++ G+ + G +
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 115 KALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLV 174
A + ++ G+ P+ +I C + + E +++ + G + + LV
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555
Query: 175 DMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII 230
K G +A+A + P+ V + +I GY +G+ A +++ +M
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615
Query: 231 PNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLI 290
P T S+LK L + ++ + ++ + + L K G+L +
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 291 FWRMPTRDVI----SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSH 346
F M R ++ ++ ++ISGL + G A+ LF K E V ++ C
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAK---EAEARGNVLPNKVMYTCFV 731
Query: 347 MGLVDRG-WD---YFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG- 401
G+ G W YF+ D TP + M+D SR GK+ + + + +G
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791
Query: 402 --LCLWRILLGG 411
L + ILL G
Sbjct: 792 PNLTTYNILLHG 803
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 154/376 (40%), Gaps = 60/376 (15%)
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDA---LRTFEFSGNKNSI-TWSAMVTGYAQSGDS 113
+K + V+ N L+ + GS + + ++ E SG +I T++ ++ Y + G
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQL-----Y 168
+ A+ L M GV T +I+ DLC R GY L ++
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIH---DLCR--SNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 169 VLSSLVDMYAKCGSLADARR----GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKM 224
++L++ ++ G + A + + P+ V + ++I G++ G+F+ AL ++ M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 225 QIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSL 284
+ + + P+E++ +L A D + + + + G V VG
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG----VCVGR------------ 443
Query: 285 DDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
I++ MI GL +NG ++A+ L ++M +G PD VT+ L++
Sbjct: 444 ---------------ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 345 SHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCL 404
+G + + ++P Y+ ++ R G L EA E+
Sbjct: 489 CKVGRFKTAKEIVCRIY-RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM-------- 539
Query: 405 WRILLGGCRNHRNYDI 420
IL G R+H +++
Sbjct: 540 --ILEGHTRDHFTFNV 553
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
+ +T ++V G +S E L++ + C GV +T +I+ C I +
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 887
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQN 211
LG L ++V + + ++R + + P+ + +I G +
Sbjct: 888 KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV 947
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
GD + A + +M +I P + +++++A + D+ + ++K +
Sbjct: 948 GDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 1007
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLL 327
+ L + K G++ + + M D++S+N +I+GL G A EL+++M
Sbjct: 1008 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067
Query: 328 EGTKPDTVTFVNLL 341
+G + T+ L+
Sbjct: 1068 DGFLANATTYKALI 1081
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 40/345 (11%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFH 121
V + N ++ K +DDAL F+ K N +T+S++++ G A +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
M + P+ T +I+A VE +++ +K ++ +SLV+ +
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 182 SLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
L A++ FE++ PDVV + ++I G+ ++ E L+ +M ++ + +T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
++++ D +++ ++ G VP
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDG----VP---------------------------P 468
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
D+++++ ++ GL NG KALE+FD M K D + ++ G VD GWD F
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
+S + + P V Y M+ L L EA ++ + D L
Sbjct: 529 CSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 155/355 (43%), Gaps = 13/355 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G A+ L +M + E + + +I+ L + +D +
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEAD-VVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
G+ V ++L++ G DA + E N N +T++A++ + + G +A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+L+ M + P FT ++N + + +QM + + + ++L+
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 177 YAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ K + D F + D V +T++I G +GD + A ++ +M + + P+
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T + +L + L++ ++ + K L++ + + + K G +DDG+ +F
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+ + +V+++N MISGL +A L KM +G P++ T+ L+ A
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 165/389 (42%), Gaps = 33/389 (8%)
Query: 50 GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDAL----RTFEFSGNKNSITWSAMVT 105
G ++ L + +GL + N L+ + + + AL + + + +T S+++
Sbjct: 108 GEKMQRLEIVHGLYTY----NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 106 GYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI------NACSDLCAIVEGRQMHGYSL 159
GY A+ L M G P T +I N S+ A+V+ +
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD------RMV 217
Query: 160 KLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFE 215
+ G L +V+ K G A ++ + DVV++ +II + +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 216 GALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALS 275
ALNL+ +M+ + I PN +T +S++ S Q+ + +I+ N + +AL
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 276 AMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTK 331
+ K G + ++ M R D+ ++N++++G + +KA ++F+ M+ +
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 332 PDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE 391
PD VT+ L+ V+ G + F+ MS + TV Y ++ L G + A++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQK 456
Query: 392 FIE---SAEVDHGLCLWRILLGG-CRNHR 416
+ S V + + ILL G C N +
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 150/387 (38%), Gaps = 61/387 (15%)
Query: 111 GDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVL 170
G+ + L + H ++ +L IN I + G +KLG+ + L
Sbjct: 108 GEKMQRLEIVHGLYTYNIL---------INCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 171 SSLVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQI 226
SSL++ Y ++DA + E +PD + +T++I G + A+ L +M
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 227 ERIIPNELTMASVL----KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCG 282
PN +T V+ K + AL+ +M A I+
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE--------------------- 257
Query: 283 SLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLS 342
DV+ +N +I L + H + AL LF +M +G +P+ VT+ +L+S
Sbjct: 258 --------------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 343 ACSHMGLVDRGWDYFKMMSD--EFDITPTVEHYACMVDILSRAGKLNEAKEFIE---SAE 397
G R D +++SD E I P + + ++D + GK EA++ +
Sbjct: 304 CLCSYG---RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 398 VDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS-PESSAYVLLSSIYTALGQWEDVE 456
+D + + L+ G H D E ++ P+ Y L + + ED
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 457 LVRRMMKARGVAKEPGCSWIELKSLVH 483
+ R M RG+ + ++ L H
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFH 447
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 139/309 (44%), Gaps = 10/309 (3%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+ +S ++ + + AL LF M G+ P FT +I+ + + ++
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF-EYVQQ---PDVVLWTSIITGYVQNGD 213
L+ + +SL+D +AK G L +A + F E +Q+ P++V + S+I G+ +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
+ A ++ M + +P+ +T +++ + G ++ + + G +
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 274 LSAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
L + + D+ ++F +M + +++++N ++ GL +NG KA+ +F+ +
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
+PD T+ + G V+ GWD F +S + + P V Y M+ + G EA
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 390 KE-FIESAE 397
FI+ E
Sbjct: 540 YTLFIKMKE 548
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 160/358 (44%), Gaps = 19/358 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENE---FVLTSILSDLNRTEFLDTGRQVHSLA 57
+++G G A+ L +M E+G+ E + ++++ L + +D + +
Sbjct: 211 VINGLCKRGEPDLALNLLNKM----EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDS 113
G+ V ++L++ G DA R E N N +T+++++ +A+ G
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL 173
+A +LF M + P+ T +IN + E +Q+ + + ++L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 174 VDMYAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
++ + K + D F + + + V +T++I G+ Q D + A ++ +M + +
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
PN +T ++L L++ + + K ++ + +S K G ++DG+
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 290 IFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+F + + DVI++N MISG + G +A LF KM +G PD+ T+ L+ A
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 143/341 (41%), Gaps = 13/341 (3%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFH 121
V + + ++ K +DDAL F NK + T+S++++ G A RL
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
M + P+ T +I+A + ++E ++ ++ + +SL++ +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 182 SLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
L +A++ F + PDVV + ++I G+ + + L+ M ++ N +T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
+++ + D + + ++ G + + + L K G L+ ++F +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 298 ----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
D+ ++N M G+ + G +LF + L+G KPD + + ++S GL +
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 354 WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
+ F M ++ + P Y ++ R G + E I+
Sbjct: 540 YTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIK 579
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 173/428 (40%), Gaps = 73/428 (17%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+ +S +++ A+ + + M GV + +T +IN + + G
Sbjct: 66 VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGK 125
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGD 213
+KLG+G + L+SL++ + +++A + E QPD V +T+++ G Q+
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLA----ALDQGKQMHAGIIKYGFNLEVP 269
A+ L +M ++ P+ +T +V+ AL+ +M G I+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE-------- 237
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
DV+ ++ +I L + H + AL LF +M +G
Sbjct: 238 ---------------------------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 330 TKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD--EFDITPTVEHYACMVDILSRAGKLN 387
+PD T+ +L+S + G R D +++SD E I P V + ++D ++ GKL
Sbjct: 271 IRPDVFTYSSLISCLCNYG---RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 388 EAKEFIE---SAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELGS-PESSAY-VLL 442
EA++ + +D + + L+ G H D ++ P+ Y L+
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 443 SSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVF---------------VV 487
+ A + +EL R M + RG+ + + +L+H F +V
Sbjct: 388 NGFCKAKKVVDGMELFRDMSR-RGLVG----NTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 488 GDSMHPQI 495
D +HP I
Sbjct: 443 SDGVHPNI 450
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 142/326 (43%), Gaps = 25/326 (7%)
Query: 99 TWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYS 158
T++ MV + ++G E+A + F+ M G P+ T +I+A + ++
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 159 LKLGFGLQLYVLSSLVDMYAKCGSLADARRGFE-------------YVQQ-------PDV 198
L G + S+L+D + K G + A + FE Y +Q P+V
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 199 VLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAG 258
V + +++ G+ ++ E A L M +E PN++ +++ + LD+ +++
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 259 IIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM----PTRDVISWNAMISGLSQNGH 314
+ ++GF + S+L Y K D + +M +V+ + MI GL + G
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 315 GNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYA 374
++A +L M +G +P+ VT+ ++ +G ++ + + M + + P Y
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYR 818
Query: 375 CMVDILSRAGKLNEAKEFIESAEVDH 400
++D + G L+ A +E + H
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 169/442 (38%), Gaps = 105/442 (23%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
M+ + GL ++A + F +MR E N T+++ + + + ++ +
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMR-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE-FSGNK-------------------NSITW 100
G L + +AL+ + K G ++ A + FE G+K N +T+
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 101 SAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLK 160
A++ G+ +S E+A +L +M G P++ +I+ + + E +++ +
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 161 LGFGLQLYVLSSLVDMY-----------------------------------AKCGSLAD 185
GF LY SSL+D Y K G +
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 186 ARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
A + + ++ QP+VV +T++I G+ G E L L +M + + PN +T ++
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 242 ACSSLAALD-------QGKQMH-----AGIIKY--GFNLEVPVGSALSAMYAKCGSLDDG 287
C ALD + KQ H AG K GFN E L + G D
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL---LDEIGQDDTA 879
Query: 288 -YLIFWRMPTRDVI---------------------------SWNAMISGLSQNGHGNKAL 319
+L +R+ ++I ++N++I L A
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 320 ELFDKMLLEGTKPDTVTFVNLL 341
+LF +M +G P+ +F +L+
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLI 961
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 164/390 (42%), Gaps = 42/390 (10%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
N I S+ +G EKA + M G +P T V+N + + +
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQN 211
+ G +Y + +VD + K G + AR+ F +++ P+VV +T++I Y++
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
A L+ M E +PN +T ++++ +++ Q+ +
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM------------ 614
Query: 272 SALSAMYAKCGSLD----DGYLIFW--RMPTRDVISWNAMISGLSQNGHGNKALELFDKM 325
CGS D D Y + +V+++ A++ G ++ +A +L D M
Sbjct: 615 ---------CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
+EG +P+ + + L+ +G +D + MS E T+ Y+ ++D + +
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS-EHGFPATLYTYSSLIDRYFKVKR 724
Query: 386 LNEA----KEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG--SPESSAY 439
+ A + +E++ + + ++ G C+ + + AY ++ME P Y
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE--AYKLMQMMEEKGCQPNVVTY 782
Query: 440 VLLSSIYTALGQWED-VELVRRMMKARGVA 468
+ + +G+ E +EL+ R M ++GVA
Sbjct: 783 TAMIDGFGMIGKIETCLELLER-MGSKGVA 811
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 134/293 (45%), Gaps = 12/293 (4%)
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
NA++ K ++DA F+ K N +T++A+V G S A RL M
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLAD 185
+ P+ T +++A ++E +++ +++ + SSL++ + +
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 186 ARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
A + F+ + DVV + ++I G+ + E + L+ +M ++ N +T ++++
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR---- 297
+D+ ++ + + +G + ++ + L G L+ +IF M R
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV 350
D++++ +I G+ + G +A LF + L+G KPD VT+ ++S GL+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 163/389 (41%), Gaps = 14/389 (3%)
Query: 13 EAIELFEQM---RCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA 69
+AI+LF M R + +L++I+ + G+++ L ++N L + V
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 70 NALVTLYAKCGSLDDALRTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVL 129
N + +L + + + +T ++V G+ + A+ L M G
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 130 PSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRG 189
P +I++ + + + G + ++LV+ +DA R
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 190 FEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSS 245
+ + P+V+ +++++ +V+NG A L+ +M I P+ +T +S++
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 246 LAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVIS 301
+D+ QM ++ G +V + L + K ++DG +F M R + ++
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 302 WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFK-MM 360
+N +I G Q G +KA E F +M G PD T+ LL G +++ F+ M
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 361 SDEFDITPTVEHYACMVDILSRAGKLNEA 389
E D+ + Y ++ + + GK+ EA
Sbjct: 428 KREMDL--DIVTYTTVIRGMCKTGKVEEA 454
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+L + G EA ELFE+M + +S+++ L + +D Q+ L +
Sbjct: 266 LLDAFVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
G L+ V N L+ + K ++D ++ F + N++T++ ++ G+ Q+GD +KA
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
F M G+ P +T ++ D + + + K L + ++++
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
K G + +A F + +PD+V +T++++G G LY KM+ E ++ N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 233 ELTMA 237
+ T++
Sbjct: 505 DCTLS 509
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 142/349 (40%), Gaps = 13/349 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G+ +A+ L ++M E + +I+ L +T+ ++ +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKM-VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
G+ V ALV DA R K N IT+SA++ + ++G +A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
LF M + P T +IN I E QM + G + ++L++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ K + D + F + Q + V + ++I G+ Q GD + A + +M I P+
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
T +L L++ + + K +L++ + + K G +++ + +F
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTF 337
+ + D++++ M+SGL G ++ L+ KM EG + T
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 127/284 (44%), Gaps = 15/284 (5%)
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
P +V + +++ V+ ++ ++L KM++ I + T V+ + +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 256 HAGIIKYGFNLE-VPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLS 310
++K G+ + V +GS ++ + + + D + +M D++++NA+I L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNG-FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD--EFDITP 368
+ N A + F ++ +G +P+ VT+ L++ + R D +++SD + ITP
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS---RWSDAARLLSDMIKKKITP 258
Query: 369 TVEHYACMVDILSRAGKLNEAKEFIES---AEVDHGLCLWRILLGGCRNHRNYDIGAYAG 425
V Y+ ++D + GK+ EAKE E +D + + L+ G H D
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 426 EKLMELGS-PESSAYVLLSSIYTALGQWEDVELVRRMMKARGVA 468
+ ++ G + +Y L + + + ED + R M RG+
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 144/345 (41%), Gaps = 40/345 (11%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFH 121
V + N ++ K +DDAL F+ K N +T+S++++ G A RL
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
M + P FT +I+A +VE +++ +K + SSL++ +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 182 SLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
L +A++ FE++ PDVV + ++I G+ + E + ++ +M ++ N +T
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
+++ D +++ ++ G VP
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDG----VP---------------------------P 464
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
+++++N ++ GL +NG KA+ +F+ + +P T+ ++ G V+ GWD F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
+S + + P V Y M+ R G EA + + D L
Sbjct: 525 CNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 178/429 (41%), Gaps = 56/429 (13%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI------NACSDLCAIV 149
N +T S+++ GY S +A+ L M +G P+ T +I N S+ A++
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 150 EGRQMHGYSLKL-GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGY 208
+ G L +G+ + L D L +G +P V+++ +II G
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG---KLEPGVLIYNTIIDGL 266
Query: 209 VQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEV 268
+ + ALNL+ +M+ + I PN +T +S++ + ++ + +I+ N +V
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 269 PVGSALSAMYAKCGSLDDGYLIFWRMPTR------------------------------- 297
SAL + K G L + ++ M R
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 298 --------DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGL 349
DV+++N +I G + + +E+F +M G +TVT+ L+ G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 350 VDRGWDYFK-MMSDEFDITPTVEHYACMVDILSRAGKLNEAK---EFIESAEVDHGLCLW 405
D + FK M+SD + P + Y ++D L + GKL +A E+++ ++++ + +
Sbjct: 447 CDMAQEIFKEMVSD--GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 406 RILLGG-CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRRMMKA 464
I++ G C+ + D ++ P+ AY + S + G E+ + + + MK
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 465 RGVAKEPGC 473
G GC
Sbjct: 565 DGTLPNSGC 573
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 139/315 (44%), Gaps = 9/315 (2%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
N + +S ++ + + AL LF M GV P+ T +I+ + + ++
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGF-EYVQQ---PDVVLWTSIITGYVQN 211
++ + ++L+D + K G L +A + + E +++ PD+ ++S+I G+ +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
+ A +++ M + PN +T +++ +D+G ++ + + G
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLL 327
+ L + + D+ ++F +M + +++++N ++ GL +NG KA+ +F+ +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLN 387
+P T+ ++ G V+ GWD F +S + + P V Y M+ R G
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKE 557
Query: 388 EAKEFIESAEVDHGL 402
EA D L
Sbjct: 558 EADALFRKMREDGPL 572
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 146/348 (41%), Gaps = 13/348 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G A L +M + E N + ++++ L + D + +
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
G+ V ++L++ DA R E N N +T++A++ + + G +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+L+ M + P FT +IN + E + M + + ++L++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 177 YAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ K + + F + Q + V +T++I G+ Q D + A ++ +M + + PN
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T ++L L++ + + + + + + K G ++DG+ +F
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVT 336
+ + DVI +N MISG + G +A LF KM +G PD+ T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/501 (18%), Positives = 203/501 (40%), Gaps = 70/501 (13%)
Query: 32 FVLTSILSDLNRTEFLDT----GRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDAL- 86
F +LS + + + D G ++ L + + L + N L+ + + + AL
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY----NILINCFCRRSQISLALA 141
Query: 87 ---RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI---- 139
+ + + +T S+++ GY A+ L M G P T +I
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 140 --NACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ--- 194
N S+ A+V+ ++ G L +V+ K G + A ++
Sbjct: 202 LHNKASEAVALVD------RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 195 -QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGK 253
+ +VV+++++I + + ALNL+ +M+ + + PN +T +S++ +
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 254 QMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGL 309
++ + +I+ N V +AL + K G L + ++ M R D+ +++++I+G
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE------ 363
+ ++A +F+ M+ + P+ VT+ L++ +D G + F+ MS
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 364 ----------FD------------------ITPTVEHYACMVDILSRAGKLNEAK---EF 392
F + P + Y ++D L + GKL +A E+
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 393 IESAEVDHGLCLWRILLGG-CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQ 451
++ ++++ + + I++ G C+ + D ++ P+ Y + S + G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 452 WEDVELVRRMMKARGVAKEPG 472
E+ + + R M+ G + G
Sbjct: 556 KEEADALFRKMREDGPLPDSG 576
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 174/426 (40%), Gaps = 60/426 (14%)
Query: 103 MVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLG 162
++ G+A+SGD KAL+L +G+ TLV +I+A +D +E + + G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 163 FGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGAL 218
+ ++L+ Y K G L DA +++ PD ++ +I YV G +E A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 219 NLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMY 278
+ +M+ + PN + +L + Q+ + G + + + +
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 279 AKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDT 334
K LD F RM + D ++WN +I ++G A E+F+ M G P
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 335 VTFVNLLSACSHMGLVDRGWDYFKMMSDEFD---ITPTVEHYACMVDILSRAGKLNEAKE 391
T+ ++++ G +R WD K + + I P V + +VD+ ++G+ N+A E
Sbjct: 515 TTYNIMINS---YGDQER-WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 392 FIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLMELG-SPESSAYVLLSSIYTALG 450
CL E++ +G P S+ Y L + Y G
Sbjct: 571 -----------CL---------------------EEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 451 QWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSMHPQIDEIRSELRLLTKLMK 510
E R+M + G+ S + L SL++ F G+ D +E + + MK
Sbjct: 599 LSEQAVNAFRVMTSDGLKP----SLLALNSLINAF--GE------DRRDAEAFAVLQYMK 646
Query: 511 DEGYQP 516
+ G +P
Sbjct: 647 ENGVKP 652
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 170/436 (38%), Gaps = 39/436 (8%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAM-- 58
++ G+A G +A++L + + L SI+S L D+GR + + A+
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTA-TLVSIISALA-----DSGRTLEAEALFE 328
Query: 59 ---KNGLLSIVSVANALVTLYAKCGSLDDA---LRTFEFSG-NKNSITWSAMVTGYAQSG 111
++G+ NAL+ Y K G L DA + E G + + T+S ++ Y +G
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 112 DSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLS 171
E A + M V P+ F ++ D + Q+ +G +
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 172 SLVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
++D + K L A F+ + +PD V W ++I + ++G A ++ M+
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
+P T ++ + D K++ + G V + L +Y K G +D
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 288 YLIFWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
M + +NA+I+ +Q G +A+ F M +G KP + +L++A
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Query: 344 CSHMGLVDRGWDYFKMMS--DEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG 401
G R + F ++ E + P V Y ++ L R K + E
Sbjct: 629 ---FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE------ 679
Query: 402 LCLWRILLGGCRNHRN 417
+++ GC+ R
Sbjct: 680 -----MIMSGCKPDRK 690
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 9/279 (3%)
Query: 197 DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMH 256
DV L II G+ ++GD AL L G Q + T+ S++ A + + + +
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 257 AGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQN 312
+ + G +AL Y K G L D + M R D +++ +I
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
G A + +M +P++ F LL+ G + + K M + P +
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQF 446
Query: 373 YACMVDILSRAGKLNEAKEFIE---SAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLM 429
Y ++D + L+ A + S ++ W L+ H + + E +
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 430 ELGS-PESSAYVLLSSIYTALGQWEDVELVRRMMKARGV 467
G P ++ Y ++ + Y +W+D++ + MK++G+
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 142/315 (45%), Gaps = 12/315 (3%)
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
G V L+ K L+ A+ F G N +T++A+VTG + G A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L M + P+ T +I+A + ++E ++++ +++ ++ SL++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
G L +AR+ F +++ P+ V++T++I G+ ++ E + ++ +M + ++ N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T +++ + D +++ + ++ + L G ++ +IF
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
M R +++++ +I G+ + G A +LF + +G KP+ +T+ ++S G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 349 LVDRGWDYFKMMSDE 363
L+ FK M ++
Sbjct: 483 LIHEADSLFKKMKED 497
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
P ++ +T +++ + ++ ++L+ +MQI I P L +++ C L++
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI-PPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 256 HAG-IIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLS 310
G ++K GF ++ ++L Y ++D +F ++ +V+++ +I L
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 311 QNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLV-DRGWDYFKMMSDEFDITPT 369
+N H N A+ELF++M G++P+ VT+ L++ +G D W MM I P
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR--IEPN 257
Query: 370 VEHYACMVDILSRAGKLNEAKE 391
V + ++D + GKL EAKE
Sbjct: 258 VITFTALIDAFVKVGKLMEAKE 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ + +G EA EL+ M + + F S+++ L LD RQ+ L +N
Sbjct: 264 LIDAFVKVGKLMEAKELYNVM-IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
G + L+ + K ++D ++ F K N+IT++ ++ GY G + A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+F+ M P T +++ + + + Y K + + + ++
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 177 YAKCGSLADARRGFEYV----QQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
K G + DA F + +P+V+ +T++I+G+ + G A +L+ KM+ + +PN
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Query: 233 E 233
E
Sbjct: 503 E 503
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 189 GFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAA 248
GFE PD+V +TS++ GY E A+ L+ ++ PN +T ++++
Sbjct: 148 GFE----PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 249 LDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNA 304
L+ ++ + G V +AL + G D + M R +VI++ A
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 305 MISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMM 360
+I + G +A EL++ M+ PD T+ +L++ GL+D F +M
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 165/393 (41%), Gaps = 57/393 (14%)
Query: 87 RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINA-CSDL 145
R E + +T++++V G +SGD+ AL L M V FT +I++ C D
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 146 C---AIVEGRQMHGYSLK--------LGFGL-----------------------QLYVLS 171
C AI ++M +K L GL + +
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 172 SLVDMYAKCGSLADARRGF-EYVQQ---PDVVLWTSIITGYVQNGDFEGALNLYGKMQIE 227
L+D++ K G L +A + E + + P+++ + +++ GY A N+ M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 228 RIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDG 287
+ P+ +T S++K + +D G ++ I K G S L + + G +
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 288 YLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPD--TVTFVNLL 341
+F M + DV+++ ++ GL NG KALE+F+ L+ +K D V + ++
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED--LQKSKMDLGIVMYTTII 480
Query: 342 SACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHG 401
G V+ W+ F + + + P V Y M+ L + G L+EA + E D
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 402 L---CLWRILLGGCRNH-RNYDIGAYAGEKLME 430
C + L+ R H R+ D+ A A KL+E
Sbjct: 540 APNDCTYNTLI---RAHLRDGDLTASA--KLIE 567
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 156/355 (43%), Gaps = 13/355 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G A++L +M E + F ++I+ L R +D +
Sbjct: 199 IVNGICRSGDTSLALDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 61 GLLSIVSVANALVTLYAKCGSLDD-ALRTFEFSGNK---NSITWSAMVTGYAQSGDSEKA 116
G+ S V N+LV K G +D AL + + N IT++ ++ + + G ++A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L+ M G+ P+ T +++ + E M ++ + +SL+
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 177 YAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
Y + D + F + + + V ++ ++ G+ Q+G + A L+ +M ++P+
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T +L L++ ++ + K +L + + + + K G ++D + +F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+P + +V+++ MISGL + G ++A L KM +G P+ T+ L+ A
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 140/348 (40%), Gaps = 45/348 (12%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
+ +S + A++ L + +G+ + +TL +IN C + G
Sbjct: 89 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 158 SLKLGFGLQLYVLSSLVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGD 213
+KLG+ ++L+ G +++A R E QPDVV + SI+ G ++GD
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 214 FEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSA 273
AL+L KM+ + + T ++++ + +D + + G V ++
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 274 LSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEG 329
L K G +DG L+ M +R +VI++N ++ + G +A EL+ +M+ G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 330 T-----------------------------------KPDTVTFVNLLSACSHMGLVDRGW 354
PD VTF +L+ + VD G
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 355 DYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
F+ +S + V Y+ +V ++GK+ A+E + V HG+
Sbjct: 389 KVFRNISKRGLVANAVT-YSILVQGFCQSGKIKLAEELFQEM-VSHGV 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 137/330 (41%), Gaps = 27/330 (8%)
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQN 211
R + + LK G L+ +L ++ ++ C R F + +V + +G V
Sbjct: 15 RLIQPHLLKTG-SLRTDLLCTISSFFSSC------ERDFSSISNGNVCFRERLRSGIVDI 67
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLA----ALDQGKQMH-AGIIKYGFNL 266
+ A+ L+ +M R +P+ + + A + LD KQ+ GI + L
Sbjct: 68 KK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQNGHGNKALELF 322
+ + + +C Y + ++ D ++N +I GL G ++A+ L
Sbjct: 127 NIMINC-----FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
D+M+ G +PD VT+ ++++ G D + M +E ++ V Y+ ++D L R
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCR 240
Query: 383 AGKLNEAKEFIESAE---VDHGLCLWRILLGG-CRNHRNYDIGAYAGEKLMELGSPESSA 438
G ++ A + E + + + L+ G C+ + D + + P
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 439 YVLLSSIYTALGQWEDVELVRRMMKARGVA 468
+ +L ++ G+ ++ + + M RG++
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGIS 330
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 159/369 (43%), Gaps = 26/369 (7%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFE-----FSGNKNSITWSAMVTGYAQSGDSEKALRLF 120
+ + N L+ + G LDDA + + T+++++ GY + G AL +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 121 HSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKC 180
H M G P+ ++ +++ L I E + G + L+ + K
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 181 GSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
+ +A F + +PDV + S+I+G + + + AL L M E ++ N +T
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
+++ A + + +++ ++ G L+ ++L + G +D +F +M
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM-L 591
Query: 297 RD-----VISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
RD IS N +I+GL ++G +A+E +M+L G+ PD VTF +L++ G ++
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 352 RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGG 411
G F+ + E I P + ++ L + G + +A ++ D G
Sbjct: 652 DGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED----------GF 700
Query: 412 CRNHRNYDI 420
NHR + I
Sbjct: 701 VPNHRTWSI 709
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 129/303 (42%), Gaps = 6/303 (1%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
NS+ + ++ ++ +AL+L M G +P T VI I E +M
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFE 215
L GF L++ K G + A+ F + +P++V++ ++I G+V +G +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 216 GALNLYGKMQIER-IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSAL 274
A + M I+P+ T S++ + ++ + G V + L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 275 SAMYAKCGSLDDGYLIFWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLLEGT 330
+ K G +D+ Y + M + + +N +IS + +A+E+F +M +G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 331 KPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAK 390
KPD TF +L+S + + + M E + TV Y +++ R G++ EA+
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT-YNTLINAFLRRGEIKEAR 549
Query: 391 EFI 393
+ +
Sbjct: 550 KLV 552
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 120/288 (41%), Gaps = 20/288 (6%)
Query: 192 YVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQ 251
Y +P + ++ V + A N++ M +I P T V+KA ++ +D
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 252 GKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRM----PTRDVISWNAMIS 307
+ + K+G + L +KC +++ + M D ++N +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 308 GLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDIT 367
GL + N+A ++ ++ML+ G PD +T+ L++ +G VD D F +
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-----K 350
Query: 368 PTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL----CLWRILLGGCRNHRNYDIGAY 423
P + + ++ G+L++AK + +G+ C + L+ G + +
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG---YWKEGLVGL 407
Query: 424 AGEKLMELGS----PESSAYVLLSSIYTALGQWEDVELVRRMMKARGV 467
A E L ++ + P +Y +L + LG+ ++ V M A G+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 114/267 (42%), Gaps = 9/267 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++S + EA+E+F +M + + + S++S L + + + +
Sbjct: 465 LISAFCKEHRIPEAVEIFREMP-RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFE---FSGNK-NSITWSAMVTGYAQSGDSEKA 116
G+++ N L+ + + G + +A + F G+ + IT+++++ G ++G+ +KA
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
LF M G PS + +IN + E + + G + +SL++
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ G + D F +Q PD V + ++++ + G A L + + +PN
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGI 259
T + +L++ LD+ + +A
Sbjct: 704 HRTWSILLQSIIPQETLDRRRFYNAAF 730
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 162 GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQNG-DFEG 216
GF L +Y +SL+ +A G +A F+ +++ P ++ + I+ + + G +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 217 ALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSA 276
+L KM+ + I P+ T +++ C + + Q+ + GF+ + +AL
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 277 MYAKCGSLDDGYLIFWRMP----TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKP 332
+Y K + + M + ++++N++IS +++G ++A+EL ++M +GTKP
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 333 DTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEF 392
D T+ LLS G V+ F+ M + P + + + + GK E +
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 393 IESAEV---DHGLCLWRILLGGC-RNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTA 448
+ V + W LL +N + ++ E PE + L S Y+
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 449 LGQWEDVELVRRMMKARGVAKE 470
G +E V R M GV +
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPD 523
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/442 (18%), Positives = 179/442 (40%), Gaps = 51/442 (11%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++S YA G+ EA+EL QM E+ + F T++LS R +++ +
Sbjct: 355 LISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSG----NKNSITWSAMVTGYAQSGDSEKA 116
G + NA + +Y G + ++ F+ + + +TW+ ++ + Q+G +
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+F M +G +P T +I+A S + + ++ L G L ++++
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERII-P 231
A+ G + + ++ +P+ + + S++ Y NG G ++ + +I P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEP 592
Query: 232 NELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAK-------CGSL 284
+ + +++ CS L + ++ + + + GF+ ++ +++ ++Y + G L
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 285 D-----------DGYLIFWRMPTR---------------------DVISWNAMISGLSQN 312
D Y M +R D+IS+N +I +N
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 313 GHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEH 372
A +F +M G PD +T+ + + + + + + M + P
Sbjct: 713 TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI-KHGCRPNQNT 771
Query: 373 YACMVDILSRAGKLNEAKEFIE 394
Y +VD + + +EAK F+E
Sbjct: 772 YNSIVDGYCKLNRKDEAKLFVE 793
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 195/475 (41%), Gaps = 71/475 (14%)
Query: 10 LAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKNGLLSIVSVA 69
L +EA ++FE+M+ ++ ++L ++ +V + + NG +
Sbjct: 294 LHQEAAQVFEEMKAAGF-SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 70 NALVTLYAKCGSLDDAL----RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
N+L++ YA+ G LD+A+ + E + T++ +++G+ ++G E A+ +F M
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 126 SGVLPS---------------EFT----LVGVINAC---------SDLCAIVEGRQMHGY 157
+G P+ +FT + IN C + L A+ M
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 158 S-------LKLGFGLQLYVLSSLVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIIT 206
+ GF + ++L+ Y++CGS A RR + PD+ + +++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL----DQGKQMHAGIIKY 262
+ G +E + + +M+ R PNELT S+L A ++ + +++++G+I+
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE- 591
Query: 263 GFNLEVPVGSALSAMY---AKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHG 315
P L + +KC L + F + R D+ + N+M+S +
Sbjct: 592 ------PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 316 NKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYAC 375
KA + D M G P T+ +L+ S + + + + + I P + Y
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK-GIKPDIISYNT 704
Query: 376 MVDILSRAGKLNEAKEFIESAEVDHGLCLWRILLGGCRNHRNYDIGAYAGEKLME 430
++ R ++ +A I S + G+ I N IG+YA + + E
Sbjct: 705 VIYAYCRNTRMRDASR-IFSEMRNSGIVPDVITY-------NTFIGSYAADSMFE 751
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 188/427 (44%), Gaps = 36/427 (8%)
Query: 67 SVANALVTLYAKCGSLDDALRTFEFSGNKNSI----TWSAMVTGYAQSGDSEKALRLFHS 122
+V + ++ +YA+ G + +AL F+ GN I + +++++ + G++ AL ++
Sbjct: 156 TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 123 MHCSGVLPSEFTLVGVINA-CSDLCAIVEGRQMHGYSLKLGFGLQLYVLS--SLVDMYAK 179
M V P FT V+NA C V+ + + GL+L V++ SL++ YA
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRS--GNVDKAMVFAKETESSLGLELNVVTYNSLINGYAM 273
Query: 180 CGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
G + R + + +VV +TS+I GY + G E A +++ ++ ++++ ++
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
++ + ++H +I+ G + ++L Y K G L + IF RM
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 296 ----TRDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
D ++N ++ G + G+ ++AL+L D+M + P +T+ LL S +G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 352 RGWDYFKMM------SDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGLCLW 405
+KMM +DE + +E L + G NEA + E+ + GL
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEA-------LFKLGDFNEAMKLWENV-LARGLLTD 505
Query: 406 RILL-----GGCRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVRR 460
I L G C+ + + + P Y LS Y +G ++ V+
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 461 MMKARGV 467
M+ +G+
Sbjct: 566 YMERKGI 572
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 182/398 (45%), Gaps = 43/398 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
++ GY GL +EA +FE ++ E++ ++ + ++ RT + +VH ++
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLK-EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 360
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTF----EFSGNKNSITWSAMVTGYAQSGDSEKA 116
G+ + ++ N+L+ Y K G L +A + F ++S + T++ +V GY ++G ++A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
L+L M V+P+ T + GYS ++G + + SL M
Sbjct: 421 LKLCDQMCQKEVVPTVMTY---------------NILLKGYS-RIG---AFHDVLSLWKM 461
Query: 177 YAKCGSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
K G AD + ++++ + GDF A+ L+ + ++ + +T+
Sbjct: 462 MLKRGVNADE------------ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
++ + +++ K++ + + V ALS Y K G+L + + + M
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 297 RDVIS----WNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
+ + +N +ISG + H NK +L ++ G P T+ L++ ++G++D+
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 353 GWDY-FKMMSDEFDITPTVEHYACMVDILSRAGKLNEA 389
+ F+M+ E IT V + + + L R K++EA
Sbjct: 630 AYATCFEMI--EKGITLNVNICSKIANSLFRLDKIDEA 665
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 100 WSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSD-LCAIVEGRQMHGYS 158
+ ++ G + GD+E AL L M + + V + NA D LC +G +H +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAH----VVIYNAIIDRLCK--DGHHIHAQN 97
Query: 159 L-----KLGFGLQLYVLSSLVDMYAKCGSLADA----RRGFEYVQQPDVVLWTSIITGYV 209
L G + S ++D + + G DA R E PDVV ++++I V
Sbjct: 98 LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV 157
Query: 210 QNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVP 269
+ G A +YG M I P +T S++ L+ K+M + + +V
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKM 325
S L Y K +D+G IF M R + +++ +I G Q G + A +L + M
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Query: 326 LLEGTKPDTVTFVNLL-SACS 345
+ G P+ +TF ++L S CS
Sbjct: 278 ISSGVAPNYITFQSMLASLCS 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 15/277 (5%)
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL---KLGFGLQLY--VLSSLVDMYAKC 180
+G P T ++N LC EGR + +L + G Q Y +++ L M
Sbjct: 4 TGCRPDVVTFTTLMNG---LCC--EGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTE 58
Query: 181 GSLADARRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVL 240
+L + E + VV++ +II ++G A NL+ +M + I P+ +T + ++
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 241 KACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTRDV- 299
+ +Q+ +I+ N +V SAL K G + + I+ M R +
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 300 ---ISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDY 356
I++N+MI G + N A + D M + PD VTF L++ VD G +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 357 FKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFI 393
F M + TV Y ++ + G L+ A++ +
Sbjct: 239 FCEMHRRGIVANTVT-YTTLIHGFCQVGDLDAAQDLL 274
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 13/271 (4%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G +A+ L ++M EEG + +I++ L + ++ + S +
Sbjct: 16 LMNGLCCEGRVLQALALVDRMV---EEGHQPY--GTIINGLCKMGDTESALNLLSKMEET 70
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKA 116
+ + V + NA++ K G A F +K + IT+S M+ + +SG A
Sbjct: 71 HIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDA 130
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+L M + P T +INA + E +++G L+ G +S++D
Sbjct: 131 EQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 177 YAKCGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ K L DA+R + + PDVV ++++I GY + + + ++ +M I+ N
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYG 263
+T +++ + LD + + +I G
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 40/345 (11%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFH 121
V + N ++ K +DDAL F+ K N +T+S++++ G A +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
M + P+ T +I+A VE ++H +K ++ +SL++ +
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 182 SLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
L A++ FE++ PD+ + ++I G+ ++ E L+ +M ++ + +T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
++++ D +++ ++ G VP
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDG----VP---------------------------P 393
Query: 298 DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
D+++++ ++ GL NG KALE+FD M K D + ++ G VD GWD F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 358 KMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
+S + + P V Y M+ L L EA ++ + D L
Sbjct: 454 CSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 153/355 (43%), Gaps = 13/355 (3%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDLNRTEFLDTGRQVHSLAMKN 60
+++G G A L +M + E + + +I+ L + +D +
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEAD-VVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 61 GLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDSEKA 116
G+ V ++L++ G DA + E N N +T++A++ + + G +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 117 LRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDM 176
+L M + P FT +IN + + +QM + + L ++L+
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 177 YAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPN 232
+ K + D F + D V +T++I G +GD + A ++ +M + + P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 233 ELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFW 292
+T + +L + L++ ++ + K L++ + + + K G +DDG+ +F
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 293 RMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+ + +V+++N MISGL +A L KM +G PD+ T+ L+ A
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 144/366 (39%), Gaps = 59/366 (16%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI------NACSDLCAIVEG 151
+T S+++ GY A+ L M G P T +I N S+ A+V+
Sbjct: 81 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD- 139
Query: 152 RQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLWTSIITG 207
++ G L +V+ K G + A ++ + DVV++ +II
Sbjct: 140 -----RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 208 YVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLE 267
+ + ALNL+ +M+ + I PN +T +S++ S Q+ + +I+ N
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 268 VPVGSALSAMYAKCGS-----------------------------------LDDGYLIFW 292
+ +AL + K G LD +F
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 293 RMPTRDVI----SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
M ++D ++N +I G ++ ELF +M G DTVT+ L+ H G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 349 LVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKE---FIESAEVDHGLCLW 405
D FK M + + P + Y+ ++D L GKL +A E +++ +E+ + ++
Sbjct: 375 DCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 406 RILLGG 411
++ G
Sbjct: 434 TTMIEG 439
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 117/537 (21%), Positives = 225/537 (41%), Gaps = 46/537 (8%)
Query: 34 LTSILSDLNRTEF-LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFS 92
L S ++ +N+ E + G Q+ +L + + L + N +L + +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 93 GNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI------NACSDLC 146
+ +T S+++ GY S A+ L M G P FT +I N S+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQ----QPDVVLWT 202
A+V+ QM ++ G L ++V+ K G + A + ++ + DVV++
Sbjct: 209 ALVD--QM----VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 203 SIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKY 262
+II G + + ALNL+ +M + I P+ T +S++ + ++ + +I+
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 263 GFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKA 318
N V SAL + K G L + ++ M R D+ +++++I+G + ++A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 319 LELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVD 378
+F+ M+ + P+ VT+ L+ V+ G + F+ MS + TV Y ++
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YTTLIH 441
Query: 379 ILSRAGKLNEAKEFIE---SAEVDHGLCLWRILLGG-CRN---HRNYDIGAYAGEKLMEL 431
+A + A+ + S V + + ILL G C+N + + Y ME
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME- 500
Query: 432 GSPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVFVVGDSM 491
P+ Y ++ G+ ED + + +GV+ + I +++ F S
Sbjct: 501 --PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP----NVIAYNTMISGFCRKGS- 553
Query: 492 HPQIDEIRSELRLLTKLMKDEGYQPHLDSLPESETTGDDLGDQEGSHEI--QLRVCG 546
+ E L K MK++G P+ + GD+E S E+ ++R CG
Sbjct: 554 -------KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 145/341 (42%), Gaps = 13/341 (3%)
Query: 66 VSVANALVTLYAKCGSLDDALRTFEFSGNK----NSITWSAMVTGYAQSGDSEKALRLFH 121
V + N ++ +++DAL F NK N +T+++++ G A RL
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 122 SMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCG 181
M + P+ T +I+A +VE +++ +K ++ SSL++ +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 182 SLADARRGFEYVQQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMA 237
L +A+ FE + P+VV + ++I G+ + + + L+ +M ++ N +T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 238 SVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR 297
+++ D + + ++ G ++ S L G ++ ++F +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 298 ----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRG 353
D+ ++N MI G+ + G +LF + L+G KP+ VT+ ++S GL +
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 354 WDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE 394
F+ M +E + P Y ++ R G + E I
Sbjct: 556 DALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIR 595
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/493 (19%), Positives = 201/493 (40%), Gaps = 61/493 (12%)
Query: 34 LTSILSDLNRTEF-LDTGRQVHSLAMKNGLLSIVSVANALVTLYAKCGSLDDAL----RT 88
L S ++ +N+ + + G Q+ +L + + L + + L+ + + L AL +
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY----SILINCFCRRSQLSLALAVLAKM 142
Query: 89 FEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVI------NAC 142
+ + +T ++++ G+ A+ L M G P FT +I N
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 143 SDLCAIVEGRQMHGYSLKL-GFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLW 201
S+ A+V+ + G L +G+ + L D+ L +G +P VV++
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG---KIEPGVVIY 259
Query: 202 TSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIK 261
+II + ALNL+ +M + I PN +T S+++ + ++ + +I+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 262 YGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNK 317
N V SAL + K G L + ++ M R D+ +++++I+G + ++
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 318 ALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSD--------------- 362
A +F+ M+ + P+ VT+ L+ VD G + F+ MS
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 363 ------EFD-------------ITPTVEHYACMVDILSRAGKLNEAK---EFIESAEVDH 400
E D + P + Y+ ++D L GK+ A E+++ ++++
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 401 GLCLWRILLGG-CRNHRNYDIGAYAGEKLMELGSPESSAYVLLSSIYTALGQWEDVELVR 459
+ + I++ G C+ + D ++ P Y + S + G E+ + +
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 460 RMMKARGVAKEPG 472
R MK G + G
Sbjct: 560 REMKEEGPLPDSG 572
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 157/367 (42%), Gaps = 37/367 (10%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENE---FVLTSILSDLNRTEFLDTGRQVHSLA 57
+++G G A+ L ++M E+G+ E + +I+ L + ++ + +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM----EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDS 113
G+ V N+L+ G DA R E N N +T+SA++ + + G
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL 173
+A +L+ M + P FT +IN + E + M + + ++L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 174 VDMYAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
+ + K + + F + Q + V +T++I G+ Q + + A ++ +M + +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 230 IPNELTMASVL-------KACSSLAALD--QGKQMHAGIIKYGFNLEVPVGSALSAMYAK 280
+P+ +T + +L K ++L + Q +M I Y +E K
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE---------GMCK 513
Query: 281 CGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVT 336
G ++DG+ +F + + +V+++ M+SG + G +A LF +M EG PD+ T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 337 FVNLLSA 343
+ L+ A
Sbjct: 574 YNTLIRA 580
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 142/336 (42%), Gaps = 40/336 (11%)
Query: 87 RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLC 146
R E IT + +V G +G A+ L M +G P+E T V+N +C
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV---MC 239
Query: 147 AIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQPDVVLWTSIIT 206
S + ++L R+ E + D V ++ II
Sbjct: 240 K----------SGQTALAMELL------------------RKMEERNIKLDAVKYSIIID 271
Query: 207 GYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNL 266
G ++G + A NL+ +M+I+ + +T +++ + D G ++ +IK +
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 267 EVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELF 322
V S L + K G L + + M R + I++N++I G + +A+++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 323 DKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSR 382
D M+ +G PD +TF L++ +D G + F+ MS I TV Y +V +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQ 450
Query: 383 AGKLNEAKEFIE---SAEVDHGLCLWRILLGG-CRN 414
+GKL AK+ + S V + ++ILL G C N
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 156/353 (44%), Gaps = 27/353 (7%)
Query: 14 AIELFEQMRCEEEEGENEFVLTSILSD-LNRTEFLDTGRQVHSLAMKNGLLSIVSVANAL 72
A+EL +M EE + + V SI+ D L + LD + + G + + N L
Sbjct: 247 AMELLRKM--EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 73 VTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHCSGV 128
+ + G DD + + + N +T+S ++ + + G +A +L M G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 129 LPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARR 188
P+ T +I+ + E QM + G + + L++ Y K + D
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD--- 421
Query: 189 GFEYVQQ-------PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLK 241
G E ++ + V + +++ G+ Q+G E A L+ +M R+ P+ ++ +L
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 242 ACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGS--LDDGYLIFWRMPTR-- 297
L++ ++ I K +E+ +G + ++ C + +DD + +F +P +
Sbjct: 482 GLCDNGELEKALEIFGKIEKS--KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 298 --DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMG 348
D ++N MIS L + +KA LF KM EG PD +T+ L+ A H+G
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 142/335 (42%), Gaps = 21/335 (6%)
Query: 98 ITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGY 157
I ++ + + A++ E L L M G+ S +TL +IN + G
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 158 SLKLGFGLQLYVLSSLVD-MYAKCG---SLADARRGFEYVQQPDVVLWTSIITGYVQNGD 213
+KLG+ + ++L++ + +C +L R E +P ++ +++ G NG
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 214 FEGALNLYGKMQIERIIPNELTMASVL----KACSSLAALDQGKQMHAGIIKYGFNLEVP 269
A+ L +M PNE+T VL K+ + A++ ++M IK L+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK----LDAV 264
Query: 270 VGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKM 325
S + K GSLD+ + +F M + D+I++N +I G G + +L M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 326 LLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGK 385
+ P+ VTF L+ + G + K M I P Y ++D + +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENR 383
Query: 386 LNEAKEFIE---SAEVDHGLCLWRILLGG-CRNHR 416
L EA + ++ S D + + IL+ G C+ +R
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 22/305 (7%)
Query: 70 NALVTLYAKCGSLDDAL----RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
N LV G + DA+ R E N +T+ ++ +SG + A+ L M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 126 SGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSL-----KLGFGLQLYVLSSLVDMYAKC 180
+ +I+ LC +G + ++L GF + ++L+ +
Sbjct: 257 RNIKLDAVKYSIIIDG---LCK--DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 181 GSLADA----RRGFEYVQQPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTM 236
G D R + P+VV ++ +I +V+ G A L +M I PN +T
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 237 ASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPT 296
S++ L++ QM +I G + ++ + L Y K +DDG +F M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 297 RDVI----SWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDR 352
R VI ++N ++ G Q+G A +LF +M+ +PD V++ LL G +++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 353 GWDYF 357
+ F
Sbjct: 492 ALEIF 496
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 8/270 (2%)
Query: 96 NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMH 155
+++ +S ++ G + G + A LF+ M G T +I + +G ++
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 156 GYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYVQQ----PDVVLWTSIITGYVQN 211
+K + S L+D + K G L +A + + + Q P+ + + S+I G+ +
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 212 GDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVG 271
E A+ + M + P+ +T ++ +D G ++ + G
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 272 SALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLL 327
+ L + + G L+ +F M +R D++S+ ++ GL NG KALE+F K+
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 328 EGTKPDTVTFVNLLSACSHMGLVDRGWDYF 357
+ D ++ ++ + VD WD F
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 127/298 (42%), Gaps = 12/298 (4%)
Query: 78 KCGSLDDALRTF---EFSGNK-NSITWSAMVTGYAQSGDSEKALRLFHSMHCSGVLPSEF 133
K GSLD+A F E G K + IT++ ++ G+ +G + +L M + P+
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 134 TLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAKCGSLADARRGFEYV 193
T +I++ + E Q+ ++ G +SL+D + K L +A + + +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 194 QQ----PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAAL 249
PD++ + +I GY + + L L+ +M + +I N +T ++++ L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 250 DQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMPTR----DVISWNAM 305
+ K++ ++ ++ L G L+ IF ++ D+ + +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 306 ISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDE 363
I G+ + A +LF + L+G K D + ++S + + F+ M++E
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 136/333 (40%), Gaps = 25/333 (7%)
Query: 196 PDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELTMASVLKACSSLAALDQGKQM 255
P V+ + + + + +E L L +M+ + I + T++ ++ L
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 256 HAGIIKYGFNLEVPV------GSALSAMYAKCGSLDDGYLIFWRMPTRDVISWNAMISGL 309
I+K G+ + + G L ++ L D + PT +I+ N +++GL
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT--LITLNTLVNGL 203
Query: 310 SQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVDRGWDYFKMMSDEFDITPT 369
NG + A+ L D+M+ G +P+ VT+ +L+ G + + M +E +I
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLD 262
Query: 370 VEHYACMVDILSRAGKLNEAKEFIESAEV---DHGLCLWRILLGGCRNHRNYDIGAYAGE 426
Y+ ++D L + G L+ A E+ + + L+GG N +D GA
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 427 KLMELG-SPESSAYVLLSSIYTALGQWEDVELVRRMMKARGVAKEPGCSWIELKSLVHVF 485
+++ SP + +L + G+ + + + + M RG+A + I SL+ F
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP----NTITYNSLIDGF 378
Query: 486 VVGDSMHPQIDEIRSELRLLTKLMKDEGYQPHL 518
+ + I + LM +G P +
Sbjct: 379 CKENRLEEAIQ--------MVDLMISKGCDPDI 403
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 176/418 (42%), Gaps = 22/418 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENEFVLTSILSDL----NRTEFLDTGRQVHSL 56
+L+GY EA+ L +QM E + N +++ L +E + ++ +
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQ-PNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 57 AMKNGLLSIVSVANALVTLYAKCGSLDDALRTFEFSGN----KNSITWSAMVTGYAQSGD 112
+ L + +V N L K G +D AL + + + ++ ++ +
Sbjct: 215 GCQPDLFTYGTVVNGL----CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 113 SEKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSS 172
AL LF M G+ P+ T +I + + ++ ++ + S+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 173 LVDMYAKCGSLADARRGF-EYVQQ---PDVVLWTSIITGYVQNGDFEGALNLYGKMQIER 228
L+D + K G L +A + + E +++ PD+ ++S+I G+ + + A +++ M +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 229 IIPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGY 288
PN +T +++K +++G ++ + + G + L + G D
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 289 LIFWRMPT----RDVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSAC 344
IF +M + D+I+++ ++ GL + G KAL +F+ + +PD T+ ++
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 345 SHMGLVDRGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIESAEVDHGL 402
G V+ GWD F +S + + P V Y M+ R G EA + D L
Sbjct: 511 CKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 185/423 (43%), Gaps = 35/423 (8%)
Query: 13 EAIELF-EQMRCEEEEGENEF-VLTSILSDLNRTEF-LDTGRQVHSLAMKNGLLSIVSVA 69
+A++LF E ++ EF L S ++ +N+ + + G ++ +L + L S
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY---- 118
Query: 70 NALVTLYAKCGSLDDAL----RTFEFSGNKNSITWSAMVTGYAQSGDSEKALRLFHSMHC 125
N L+ + + L AL + + + +T S+++ GY +A+ L M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 126 SGVLPSEFTLVGVI------NACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSLVDMYAK 179
P+ T +I N S+ A+++ G L+ ++V+ K
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP------DLFTYGTVVNGLCK 232
Query: 180 CGSLADARRGFEYVQ----QPDVVLWTSIITGYVQNGDFEGALNLYGKMQIERIIPNELT 235
G + A + ++ + DVV++T+II + ALNL+ +M + I PN +T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 236 MASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYLIFWRMP 295
S+++ + ++ + +I+ N V SAL + K G L + ++ M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 296 TR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSACSHMGLVD 351
R D+ +++++I+G + ++A +F+ M+ + P+ VT+ L+ V+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 352 RGWDYFKMMSDEFDITPTVEHYACMVDILSRAGKLNEAKEFIE---SAEVDHGLCLWRIL 408
G + F+ MS + TV Y ++ L +AG + A++ + S V + + IL
Sbjct: 413 EGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 409 LGG 411
L G
Sbjct: 472 LDG 474
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 154/358 (43%), Gaps = 19/358 (5%)
Query: 1 MLSGYASLGLAKEAIELFEQMRCEEEEGENE---FVLTSILSDLNRTEFLDTGRQVHSLA 57
+++G G A+ L ++M E+G+ E + T+I+ L + ++ + +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKM----EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 58 MKNGLLSIVSVANALVTLYAKCGSLDDALR----TFEFSGNKNSITWSAMVTGYAQSGDS 113
G+ V N+L+ G DA R E N N +T+SA++ + + G
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 114 EKALRLFHSMHCSGVLPSEFTLVGVINACSDLCAIVEGRQMHGYSLKLGFGLQLYVLSSL 173
+A +L+ M + P FT +IN + E + M + + ++L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 174 VDMYAKCGSLADARRGFEYVQQP----DVVLWTSIITGYVQNGDFEGALNLYGKMQIERI 229
+ + K + + F + Q + V + ++I G Q GD + A ++ KM + +
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 230 IPNELTMASVLKACSSLAALDQGKQMHAGIIKYGFNLEVPVGSALSAMYAKCGSLDDGYL 289
P+ +T + +L L++ + + K ++ + + K G ++DG+
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 290 IFWRMPTR----DVISWNAMISGLSQNGHGNKALELFDKMLLEGTKPDTVTFVNLLSA 343
+F + + +VI + MISG + G +A LF +M +GT P++ T+ L+ A
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579