Miyakogusa Predicted Gene

Lj0g3v0105219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105219.1 Non Chatacterized Hit- tr|D7SVD6|D7SVD6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.95,0.0000000000008,HMA,Heavy metal-associated domain, HMA;
HMA_2,Heavy metal-associated domain, HMA; HMA, heavy
metal-a,CUFF.5989.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04900.1 | Symbols:  | Heavy metal transport/detoxification s...    72   5e-13
AT5G19090.3 | Symbols:  | Heavy metal transport/detoxification s...    60   1e-09
AT5G19090.2 | Symbols:  | Heavy metal transport/detoxification s...    60   1e-09
AT5G19090.1 | Symbols:  | Heavy metal transport/detoxification s...    60   1e-09
AT3G06130.1 | Symbols:  | Heavy metal transport/detoxification s...    60   1e-09
AT3G06130.2 | Symbols:  | Heavy metal transport/detoxification s...    60   2e-09
AT5G27690.1 | Symbols:  | Heavy metal transport/detoxification s...    55   3e-08
AT3G05220.1 | Symbols:  | Heavy metal transport/detoxification s...    55   7e-08
AT5G37860.1 | Symbols:  | Heavy metal transport/detoxification s...    55   7e-08
AT1G23000.1 | Symbols:  | Heavy metal transport/detoxification s...    51   9e-07
AT1G66240.1 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 ...    50   2e-06
AT5G66110.1 | Symbols: HIPP27 | Heavy metal transport/detoxifica...    49   4e-06
AT1G66240.2 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 ...    49   5e-06
AT1G71050.1 | Symbols: HIPP20 | Heavy metal transport/detoxifica...    49   5e-06
AT1G30473.1 | Symbols:  | Heavy metal transport/detoxification s...    48   5e-06
AT3G56240.1 | Symbols: CCH | copper chaperone | chr3:20863460-20...    48   8e-06
AT1G06330.1 | Symbols:  | Heavy metal transport/detoxification s...    47   9e-06

>AT3G04900.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr3:1349302-1349928 REVERSE
          LENGTH=208
          Length = 208

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 1  MEDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLV 60
          MED L+ PI  LK++  C ++ P+ VK +L+Q+KGV +I+IDP +G + V G   P VL+
Sbjct: 1  MED-LDFPICILKMNLQCCEDFPSRVKKLLRQVKGVYAITIDPVKGLILVCGTAEPSVLI 59

Query: 61 KLLQKMGKKAKLWSFDQGPMQKRS 84
          K + K+G+  +L+++++ P   ++
Sbjct: 60 KAVAKLGQSPQLYAYEKDPATAKT 83


>AT5G19090.3 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr5:6387910-6389855 FORWARD
          LENGTH=465
          Length = 465

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV +  ID   GKVTV+GNV P VL+K L K GK A
Sbjct: 13 VLKVNIHCD-GCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHA 71

Query: 71 KLWSFDQG 78
          ++W   +G
Sbjct: 72 EIWGAPKG 79


>AT5G19090.2 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr5:6387910-6389855 FORWARD
          LENGTH=465
          Length = 465

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV +  ID   GKVTV+GNV P VL+K L K GK A
Sbjct: 13 VLKVNIHCD-GCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHA 71

Query: 71 KLWSFDQG 78
          ++W   +G
Sbjct: 72 EIWGAPKG 79


>AT5G19090.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr5:6387910-6389855 FORWARD
          LENGTH=587
          Length = 587

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV +  ID   GKVTV+GNV P VL+K L K GK A
Sbjct: 13 VLKVNIHCD-GCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHA 71

Query: 71 KLWSFDQG 78
          ++W   +G
Sbjct: 72 EIWGAPKG 79


>AT3G06130.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr3:1853048-1854673 REVERSE
          LENGTH=473
          Length = 473

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV +  ID  +GKVTV+G+V P VL+K L K GK A
Sbjct: 13 VLKVNIHCD-GCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHA 71

Query: 71 KLWSFDQG 78
          ++W   +G
Sbjct: 72 EIWGAPKG 79


>AT3G06130.2 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr3:1853193-1854673 REVERSE
          LENGTH=349
          Length = 349

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV +  ID  +GKVTV+G+V P VL+K L K GK A
Sbjct: 13 VLKVNIHCD-GCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHA 71

Query: 71 KLWSFDQG 78
          ++W   +G
Sbjct: 72 EIWGAPKG 79


>AT5G27690.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr5:9803796-9805036 FORWARD
          LENGTH=352
          Length = 352

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           L+V   C + C   +K +L ++ GV + +ID  + KVTV GNV P +L+K + K G+ A
Sbjct: 33 VLRVSIHC-EGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHA 91

Query: 71 KLW 73
          +LW
Sbjct: 92 ELW 94


>AT3G05220.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr3:1488808-1491171 FORWARD
          LENGTH=577
          Length = 577

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 2  EDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVK 61
          +D ++     LKV+  C + C + VK  LQ+++GV S+  D  +G+VTV GN+ P +LVK
Sbjct: 4  QDVMKLQTCVLKVNVHC-EGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNIDPALLVK 62

Query: 62 LLQKMGKKAKLW 73
           L K GK A++ 
Sbjct: 63 KLSKSGKHAEIL 74


>AT5G37860.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr5:15069578-15070555 REVERSE
          LENGTH=262
          Length = 262

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MEDNLESPIST--LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMV 58
          M  N+  P+ T  LKV+  C + C   VK  L++++GV S+ ID  +  V V GN+ P +
Sbjct: 1  MPRNVYEPLKTYFLKVNINC-QGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGNLDPEI 59

Query: 59 LVKLLQKMGKKAKLW 73
          LVK L K GK A+L 
Sbjct: 60 LVKKLNKRGKHAQLM 74


>AT1G23000.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr1:8143614-8144865 FORWARD
          LENGTH=358
          Length = 358

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
          +L+V+  C + C   VK +LQ+++GV  + I+    KVTV+G+V    L+  L K GK A
Sbjct: 16 SLRVNIHC-EGCNKKVKKLLQRIEGVCHVKIEAEHQKVTVSGSVDSATLINKLVKAGKHA 74

Query: 71 KLWS 74
          +LWS
Sbjct: 75 ELWS 78


>AT1G66240.1 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 |
          chr1:24686445-24687327 REVERSE LENGTH=106
          Length = 106

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 1  MEDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLV 60
          +E    S    L+V   C + C   VK +L +++GV+S  +D  E KVTV GNV P  ++
Sbjct: 26 VESKAMSQTVVLRVAMTC-EGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVL 84

Query: 61 KLLQKMGKKAKLW 73
          + + K GKK   W
Sbjct: 85 QTVTKTGKKTAFW 97


>AT5G66110.1 | Symbols: HIPP27 | Heavy metal
          transport/detoxification superfamily protein  |
          chr5:26430245-26430778 FORWARD LENGTH=147
          Length = 147

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 12 LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLV-KLLQKMGKKA 70
          +KV   C + C   V+  ++ +KGV  +++DP + K+TV G V P  +V +++ + GKKA
Sbjct: 23 IKVKMDC-EGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTGKKA 81

Query: 71 KLWSF 75
          +LW +
Sbjct: 82 ELWPY 86


>AT1G66240.2 | Symbols: ATX1, ATATX1 | homolog of anti-oxidant 1 |
          chr1:24686445-24686832 REVERSE LENGTH=66
          Length = 66

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 20 KNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAKLW 73
          + C   VK +L +++GV+S  +D  E KVTV GNV P  +++ + K GKK   W
Sbjct: 4  EGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTAFW 57


>AT1G71050.1 | Symbols: HIPP20 | Heavy metal
          transport/detoxification superfamily protein  |
          chr1:26803322-26803946 REVERSE LENGTH=152
          Length = 152

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 12 LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAK 71
          +KV   C   C   VK  +  +KGVKS+ ++    KVTV+G V P  ++K +++ GKKA+
Sbjct: 32 IKVKMDCD-GCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAE 90

Query: 72 LWSF 75
          +W +
Sbjct: 91 IWPY 94


>AT1G30473.1 | Symbols:  | Heavy metal transport/detoxification
          superfamily protein  | chr1:10787215-10788107 FORWARD
          LENGTH=239
          Length = 239

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKVD  C   C     + LQ + GV+ +  +  +G +TV G+V PM LV+ L K  +K 
Sbjct: 12 ILKVDLKCCIGCQKKASMKLQSISGVEEVEYNIEKGLMTVRGDVEPMALVRKLNKHDRKT 71

Query: 71 KLWS 74
          +L+S
Sbjct: 72 ELFS 75


>AT3G56240.1 | Symbols: CCH | copper chaperone |
          chr3:20863460-20864402 REVERSE LENGTH=121
          Length = 121

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 12 LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAK 71
          LKV   C + C   V  +L +++GV+S  ID  E KVTV GNV P  + + + K GKK  
Sbjct: 7  LKVGMSC-QGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGKKTS 65

Query: 72 LW 73
           W
Sbjct: 66 YW 67


>AT1G06330.1 | Symbols:  | Heavy metal transport/detoxification
           superfamily protein  | chr1:1931671-1932266 REVERSE
           LENGTH=159
          Length = 159

 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 12  LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAK 71
           ++V   C   C + VK  LQ+++GV ++ ID  + KVTV G      ++K ++K G++A+
Sbjct: 15  MRVHMDCV-GCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAE 73

Query: 72  LWSFDQGPMQKRSGSSHSKQKDTSHGC 98
           LW     P      SS+        GC
Sbjct: 74  LWQLPYNPDHMGGSSSNGGYFYNPQGC 100