Miyakogusa Predicted Gene

Lj0g3v0105159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105159.1 tr|A9RQS3|A9RQS3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_160518,32.35,0.000000000000002,no description,PLC-like
phosphodiesterase, TIM beta/alpha-barrel domain; seg,NULL; PLC-like
phosphod,CUFF.5985.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58170.1 | Symbols: SVL5 | SHV3-like 5 | chr5:23540261-235430...   218   3e-57
AT5G58050.1 | Symbols: SVL4 | SHV3-like 4 | chr5:23494498-234973...   217   5e-57
AT3G20520.1 | Symbols: SVL3 | SHV3-like 3 | chr3:7162845-7165742...   181   3e-46
AT1G66970.2 | Symbols: SVL2 | SHV3-like 2 | chr1:24992746-249960...   181   3e-46
AT1G66970.1 | Symbols: SVL2 | SHV3-like 2 | chr1:24992746-249960...   181   4e-46
AT4G26690.1 | Symbols: SHV3, MRH5, GPDL2 | PLC-like phosphodiest...   176   2e-44
AT1G66980.1 | Symbols: SNC4 | suppressor of npr1-1 constitutive ...   173   8e-44
AT5G55480.1 | Symbols: SVL1 | SHV3-like 1 | chr5:22474277-224778...   166   2e-41

>AT5G58170.1 | Symbols: SVL5 | SHV3-like 5 | chr5:23540261-23543092
           REVERSE LENGTH=750
          Length = 750

 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/245 (46%), Positives = 157/245 (64%), Gaps = 6/245 (2%)

Query: 2   DVKGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLNVDAILSLQSPPRFWLNVQNA 61
           D+KG F +DY    I  NV++ Q +F+RP  +DG   V  V+ +L  + PP+FWL+VQ  
Sbjct: 117 DLKGWFVLDYDADTIFNNVTLVQNIFSRPSIFDGQMSVSAVEDVLGTK-PPKFWLSVQYD 175

Query: 62  AFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNKA-TKVIFQLLQSNDVE 120
           AFY +  L   + +  +   +  I ++SSP+IGFLK I     +A TK+IF+      VE
Sbjct: 176 AFYMEHKLSPAEYLRSLQ--FRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAVE 233

Query: 121 PLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFAS 180
           P T K Y  + ++LAAIK FASG++VPK+YIWP+   KYL   TT VADAHK+GLEV+AS
Sbjct: 234 PTTNKKYSEIQQNLAAIKAFASGVLVPKDYIWPIDSAKYLKPATTFVADAHKAGLEVYAS 293

Query: 181 GFAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNN-TLPRKG 238
           GFA            P+AEYLQF+D+G  SVDGV+TDFP TAS +I CF+H N  LP+ G
Sbjct: 294 GFANDLRTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAG 353

Query: 239 ILILL 243
             +++
Sbjct: 354 HALVI 358


>AT5G58050.1 | Symbols: SVL4 | SHV3-like 4 | chr5:23494498-23497386
           REVERSE LENGTH=753
          Length = 753

 Score =  217 bits (553), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 157/246 (63%), Gaps = 6/246 (2%)

Query: 1   MDVKGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLNVDAILSLQSPPRFWLNVQN 60
            D+KG F +DY    I   V++ Q +F+RP  +DG   V  V+ +L  + PP+FWL+VQ 
Sbjct: 116 QDLKGWFVIDYDADTIFNKVTLVQNIFSRPSIFDGQMSVSAVEDVLGTK-PPKFWLSVQY 174

Query: 61  AAFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNKA-TKVIFQLLQSNDV 119
            AFY +  L   +  L  LR +  I ++SSP+IGFLK I     +A TK+IF+      V
Sbjct: 175 DAFYMEHKLSPAE-YLRSLR-FRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAV 232

Query: 120 EPLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFA 179
           EP T K Y  + ++LAAIK FASG++VPK+YIWP+   KYL   TT VADAHK+GLEV+A
Sbjct: 233 EPTTNKKYSEIQQNLAAIKAFASGVLVPKDYIWPIDSAKYLKPATTFVADAHKAGLEVYA 292

Query: 180 SGFAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNN-TLPRK 237
           SGFA            P+AEYLQF+D+G  SVDGV+TDFP TAS +I CF+H N  LP+ 
Sbjct: 293 SGFANDLRTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKA 352

Query: 238 GILILL 243
           G  +++
Sbjct: 353 GHALVI 358


>AT3G20520.1 | Symbols: SVL3 | SHV3-like 3 | chr3:7162845-7165742
           FORWARD LENGTH=729
          Length = 729

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/229 (41%), Positives = 138/229 (60%), Gaps = 5/229 (2%)

Query: 4   KGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLNVDAILSLQSPPRFWLNVQNAAF 63
           K  FSVD+T  ++  +V + Q + +RP  +D    +L ++ +  L +    WLN+Q++AF
Sbjct: 100 KERFSVDFTWKEL-SDVKLAQGVVSRPYIFDDVSSILAIEEVAKLTASG-LWLNIQDSAF 157

Query: 64  YTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTN-KATKVIFQLLQSNDVEPL 122
           Y +  L + + V+ + R    +  +SSP I FLK +        TK+IF+ L+   +EP 
Sbjct: 158 YAKHNLSMRNSVVSLSRRL-KVNFISSPGISFLKSMKNSVKPTVTKLIFRFLKQEHIEPF 216

Query: 123 TKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFASGF 182
           T + YG++ K+L+ I+ F+SGI+VPK YIWPV    YL   T+LV DAHK GL+VFAS F
Sbjct: 217 TNQSYGSLAKNLSYIRTFSSGILVPKSYIWPVDSALYLQPHTSLVTDAHKEGLQVFASEF 276

Query: 183 AXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAH 230
           A            PTAEYL FID+G+ SVDG ++DFP T   AI CF+H
Sbjct: 277 ANDFVIAYNYSYDPTAEYLSFIDNGNFSVDGFLSDFPVTPYRAINCFSH 325



 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 28/237 (11%)

Query: 5   GHFSVDYTTAQID------QNVSMTQALFTRPGFYDGAGPVLNVDAILSLQSPPRF---- 54
           G ++   T +QI        N+     LF  P   + AG  L +   L L  P R+    
Sbjct: 415 GIYTFSLTMSQIQTLKPTISNLEKDSGLFRNPR-NNKAGKFLTLSEFLFL--PNRYSSLL 471

Query: 55  --WLNVQNAAFYTQ-QGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNKATKVIF 111
              + V+NAA+  + QG+ VVD VLD L+     +  +S     ++     T+K+  + F
Sbjct: 472 GLLIEVENAAYLVEHQGISVVDAVLDELKRATTQQNKTSARTILIQS----TDKSVLMKF 527

Query: 112 QLLQSNDVEPLTKKPYGTVVKDLAA-----IKLFASGIMVPKEYIWPVKPDKYLGLPTTL 166
           +     + + L  +     ++D+A      IK FA  I++ K+ ++P K    L   T +
Sbjct: 528 KEKNKMNHDELVYR-VDDNIRDVADSAIKDIKNFAGSIVISKKSVFPYKGFIILEKETNI 586

Query: 167 VADAHKSGLEVFASGFAXXXXXXX-XXXXXPTAEYLQFIDHGDSVDGVVTDFPTTAS 222
            +    +GL V+   F+             PT E   F+     +DG++TDFP T +
Sbjct: 587 ASKLKSNGLRVYVERFSNECVTHAFDFYDDPTLEIDSFV-RDVQIDGIITDFPATTA 642


>AT1G66970.2 | Symbols: SVL2 | SHV3-like 2 | chr1:24992746-24996005
           REVERSE LENGTH=785
          Length = 785

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 150/246 (60%), Gaps = 5/246 (2%)

Query: 4   KGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLN-VDAILSLQSPPRFWLNVQNAA 62
           KG F  D++  ++ QN  + + + +R   +DG G +++ ++ +++  +   FWLNVQ+ A
Sbjct: 150 KGWFPNDFSLTEL-QNFLLIRGILSRTDRFDGNGYLISTIEDVVTTLNREGFWLNVQHDA 208

Query: 63  FYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNK-ATKVIFQLLQSNDVEP 121
           FY QQ L +   +L + R   +I+ +SSP++ F K I+G   +     +FQ L   D EP
Sbjct: 209 FYEQQNLSMSSFLLSVSRTV-SIDFISSPEVNFFKKITGSFGRNGPTFVFQFLGKEDFEP 267

Query: 122 LTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFASG 181
            T + YG+++ +L  +K FASGI+VPK YI P+  ++YL   T+LV DAHK+GL+V+ SG
Sbjct: 268 TTNRTYGSILSNLTFVKTFASGILVPKSYILPLDDEQYLVPHTSLVQDAHKAGLQVYVSG 327

Query: 182 FAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNNTLPRKGIL 240
           FA            P +EYL F+D+GD SVDGV++DFP TAS A+ CF+H      K + 
Sbjct: 328 FANDVDIAYNYSSDPVSEYLSFVDNGDFSVDGVLSDFPITASAAVDCFSHIGRNATKQVD 387

Query: 241 ILLIPK 246
            L+I K
Sbjct: 388 FLVISK 393


>AT1G66970.1 | Symbols: SVL2 | SHV3-like 2 | chr1:24992746-24996005
           REVERSE LENGTH=763
          Length = 763

 Score =  181 bits (459), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 150/246 (60%), Gaps = 5/246 (2%)

Query: 4   KGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLN-VDAILSLQSPPRFWLNVQNAA 62
           KG F  D++  ++ QN  + + + +R   +DG G +++ ++ +++  +   FWLNVQ+ A
Sbjct: 128 KGWFPNDFSLTEL-QNFLLIRGILSRTDRFDGNGYLISTIEDVVTTLNREGFWLNVQHDA 186

Query: 63  FYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNK-ATKVIFQLLQSNDVEP 121
           FY QQ L +   +L + R   +I+ +SSP++ F K I+G   +     +FQ L   D EP
Sbjct: 187 FYEQQNLSMSSFLLSVSRTV-SIDFISSPEVNFFKKITGSFGRNGPTFVFQFLGKEDFEP 245

Query: 122 LTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFASG 181
            T + YG+++ +L  +K FASGI+VPK YI P+  ++YL   T+LV DAHK+GL+V+ SG
Sbjct: 246 TTNRTYGSILSNLTFVKTFASGILVPKSYILPLDDEQYLVPHTSLVQDAHKAGLQVYVSG 305

Query: 182 FAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNNTLPRKGIL 240
           FA            P +EYL F+D+GD SVDGV++DFP TAS A+ CF+H      K + 
Sbjct: 306 FANDVDIAYNYSSDPVSEYLSFVDNGDFSVDGVLSDFPITASAAVDCFSHIGRNATKQVD 365

Query: 241 ILLIPK 246
            L+I K
Sbjct: 366 FLVISK 371


>AT4G26690.1 | Symbols: SHV3, MRH5, GPDL2 | PLC-like
           phosphodiesterase family protein |
           chr4:13456793-13459890 REVERSE LENGTH=759
          Length = 759

 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 150/245 (61%), Gaps = 5/245 (2%)

Query: 5   GHFSVDYTTAQIDQNVSMTQALFTRPGFYDG-AGPVLNVDAILSLQSPPRFWLNVQNAAF 63
           G F++D++   + ++V++ + + +R   +DG + P++ V ++ +   P  FWLNVQ+ AF
Sbjct: 123 GWFTIDFSLKDL-KDVNLIRGILSRSEKFDGNSNPIMTVQSVSTQMKPSFFWLNVQHDAF 181

Query: 64  YTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNK-ATKVIFQLLQSNDVEPL 122
           Y Q  L +   ++   +    I+ +SSP++ F K I+G+  +    ++F+ L  ++ EP 
Sbjct: 182 YAQHNLSMSSFLVAASKTV-LIDFISSPEVNFFKKIAGRFGRNGPSLVFRFLGQDEFEPT 240

Query: 123 TKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFASGF 182
           T + YG+++ +L  +K FASGI+VPK YI P+   +YL   T+LV DAHK+GLEVF SGF
Sbjct: 241 TNRTYGSILSNLTFVKTFASGILVPKSYILPLDDQQYLLPHTSLVQDAHKAGLEVFVSGF 300

Query: 183 AXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNNTLPRKGILI 241
           A            P +EYL F+D+G+ SVDGV++DFP TAS ++ CF+H      K +  
Sbjct: 301 ANDIDIAHDYSFDPVSEYLSFVDNGNFSVDGVLSDFPITASASLDCFSHVGRNATKQVDF 360

Query: 242 LLIPK 246
           L+I K
Sbjct: 361 LVITK 365


>AT1G66980.1 | Symbols: SNC4 | suppressor of npr1-1 constitutive 4 |
           chr1:24997491-25001961 REVERSE LENGTH=1118
          Length = 1118

 Score =  173 bits (439), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 146/247 (59%), Gaps = 5/247 (2%)

Query: 4   KGHFSVDYTTAQIDQNV-SMTQALFTRPGFYDGAG-PVLNVDAILSLQSPPRFWLNVQNA 61
           KG F +D++  ++ + + S+ + + +R G +D  G  +  V  + +   P  FWLNVQ+ 
Sbjct: 129 KGWFPIDFSLTELQKVLFSLIRGILSRSGKFDENGYSISTVQNVATQMKPALFWLNVQHD 188

Query: 62  AFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGK-TNKATKVIFQLLQSNDVE 120
            FY Q  L +   +L   R   +I+ +SSP++ F + I+G   N     +FQ +   D E
Sbjct: 189 EFYEQHNLSMSSFLLSTSRTV-SIDFISSPEVNFFRKIAGGFGNNGPSFVFQFMGKEDFE 247

Query: 121 PLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFAS 180
           P T + YG+++ +L+ +K FASGI+VPK YI P+   +YL   T+LV DAHK+GL+++AS
Sbjct: 248 PTTNRTYGSILSNLSFVKTFASGILVPKSYILPLDDKQYLLPHTSLVQDAHKAGLKLYAS 307

Query: 181 GFAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNNTLPRKGI 239
           GFA            P +EYL F+D+G+ SVDG+++DFP TAS ++ CF+H      K +
Sbjct: 308 GFANDVDIAYNYSWDPVSEYLSFVDNGNFSVDGMLSDFPLTASASVDCFSHIGRNATKQV 367

Query: 240 LILLIPK 246
             L+I K
Sbjct: 368 DFLVISK 374


>AT5G55480.1 | Symbols: SVL1 | SHV3-like 1 | chr5:22474277-22477819
           FORWARD LENGTH=766
          Length = 766

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 144/243 (59%), Gaps = 6/243 (2%)

Query: 7   FSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLNVDAILSLQ-SPPRFWLNVQNAAFYT 65
           F++D+    + + V + Q + +R   +DG    ++    +S Q  P  FWLNVQ+ AFY 
Sbjct: 131 FTIDFNFKDLTK-VILKQGILSRSAAFDGNSYGISTVKDISTQLKPEGFWLNVQHDAFYA 189

Query: 66  QQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNK-ATKVIFQLLQSNDVEPLTK 124
           Q  L +   +L + +    I+ +SSP++ F + I  +  +   K +F+ L+ +DVE  T 
Sbjct: 190 QHNLSMSSFLLSISKTV-IIDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEKDDVEVSTN 248

Query: 125 KPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFASGFAX 184
           + YG++  +L  +K FASG++VPK YIWP++  +YL   T+ V DAHK+GLEV+ASGF  
Sbjct: 249 QTYGSLAGNLTFLKTFASGVLVPKSYIWPIE-SQYLLPRTSFVQDAHKAGLEVYASGFGN 307

Query: 185 XXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNNTLPRKGILILL 243
                      P AEYL F+D+GD SVDG+++DFP TAS+A+ CF+H  +     +  L+
Sbjct: 308 DFDLAYNYSFDPLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGSNASSQVDFLV 367

Query: 244 IPK 246
           I K
Sbjct: 368 ISK 370