Miyakogusa Predicted Gene

Lj0g3v0104939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104939.2 Non Chatacterized Hit- tr|I1MS55|I1MS55_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37875 PE,70,0.00000007,
,CUFF.5969.2
         (42 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact...    56   6e-09
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23...    52   6e-08
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran...    52   6e-08
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran...    52   7e-08

>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
           19 | chr1:6628395-6632779 REVERSE LENGTH=1086
          Length = 1086

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 30/40 (75%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+ENAFKRA+PW+   F MKD  SS+F   SL+Q
Sbjct: 379 MPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLSLVQ 418


>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
           IAA25 | Transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related |
           chr5:7016704-7021504 REVERSE LENGTH=1150
          Length = 1150

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+E+A KRA+PWL+    MKD  S++F   SL+Q
Sbjct: 381 MPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQ 420


>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
           Transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related |
           chr5:7016704-7021504 REVERSE LENGTH=1164
          Length = 1164

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+E+A KRA+PWL+    MKD  S++F   SL+Q
Sbjct: 380 MPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQ 419


>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
           Transcriptional factor B3 family protein /
           auxin-responsive factor AUX/IAA-related |
           chr5:7016704-7021504 REVERSE LENGTH=1165
          Length = 1165

 Score = 52.4 bits (124), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+E+A KRA+PWL+    MKD  S++F   SL+Q
Sbjct: 381 MPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQ 420