Miyakogusa Predicted Gene

Lj0g3v0104549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104549.1 Non Chatacterized Hit- tr|H9WEJ2|H9WEJ2_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,62.38,3e-19,coiled-coil,NULL; seg,NULL,CUFF.5938.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04910.1 | Symbols:  | unknown protein; Has 71 Blast hits to ...   182   7e-47

>AT5G04910.1 | Symbols:  | unknown protein; Has 71 Blast hits to 71
           proteins in 36 species: Archae - 0; Bacteria - 0;
           Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other
           Eukaryotes - 14 (source: NCBI BLink). |
           chr5:1437695-1438770 FORWARD LENGTH=222
          Length = 222

 Score =  182 bits (462), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 92/148 (62%), Positives = 115/148 (77%)

Query: 3   SGGELAYQQLCSGITTEFNDCSKKVLEMESLFRSPDYCRVDLAQILRAVQDQEKQKLHLT 62
           SG E  YQ+LCS ITTEF++CSK+V EMESLF +P+  R DLA++L  +Q QEKQKLHLT
Sbjct: 75  SGAEALYQKLCSEITTEFSECSKQVREMESLFLNPEVGRADLAKLLSDIQTQEKQKLHLT 134

Query: 63  ATIQLLKKAGRPSERLVSHENCKYTKPSEHVCANVQEITEASGTXXXXXXXXXXXXLKEA 122
            TIQ+LKKAGRPSER+++HENCK+ KP +H C ++ EITEA+GT            LKEA
Sbjct: 135 VTIQVLKKAGRPSERMLTHENCKFKKPMQHECVHLHEITEAAGTEEAEADAEFDNALKEA 194

Query: 123 IRGVQDAVMAINEHLEEVRYEIAALEVE 150
           IRGVQDAV +INE+LE++RYEI ALE +
Sbjct: 195 IRGVQDAVTSINEYLEDIRYEIEALEAD 222