Miyakogusa Predicted Gene
- Lj0g3v0104269.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0104269.1 Non Chatacterized Hit- tr|E5GC23|E5GC23_CUCME
Putative uncharacterized protein OS=Cucumis melo
subsp,23.89,6e-18,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,P,CUFF.5918.1
(497 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 611 e-175
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 351 6e-97
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 3e-91
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 322 3e-88
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 318 4e-87
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 5e-86
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 310 2e-84
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 295 4e-80
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 292 3e-79
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 285 6e-77
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 6e-77
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 281 7e-76
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 3e-75
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 279 4e-75
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 4e-75
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 278 5e-75
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 7e-75
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 276 3e-74
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 9e-74
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 1e-73
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 271 7e-73
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 269 3e-72
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 267 1e-71
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 265 4e-71
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 7e-71
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 3e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 260 2e-69
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 259 3e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 5e-69
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 258 8e-69
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 257 1e-68
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 3e-67
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 6e-67
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 251 9e-67
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 9e-66
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 247 1e-65
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 4e-65
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 245 5e-65
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 7e-65
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 7e-65
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 2e-64
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 243 2e-64
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 243 3e-64
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 234 1e-61
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 232 4e-61
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 231 6e-61
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 229 3e-60
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 1e-59
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 1e-58
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 7e-58
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 221 7e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 213 3e-55
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 204 8e-53
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 6e-51
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 185 7e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 4e-46
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 7e-46
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 3e-45
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 175 6e-44
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 1e-43
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 4e-39
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 101 1e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 9e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 94 1e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 93 4e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 90 3e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 2e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 4e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 2e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 9e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 73 6e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 5e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 3e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 2e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 2e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 53 6e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 7e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 611 bits (1575), Expect = e-175, Method: Compositional matrix adjust.
Identities = 295/486 (60%), Positives = 369/486 (75%), Gaps = 5/486 (1%)
Query: 7 SNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
S K+QCL L LC SI L QI Q H+ ++++++SELV V SLS +K+L AR L+
Sbjct: 11 SRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLL 70
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
LHS+ +P +WN+L RG+++SDSP+E+IWV+ +M+ RG+KPNKLTFPFLLK CA L
Sbjct: 71 LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
G+Q+ + +K G D DVYVGNNLI+ YG CKK DARKVFDEM ER VSWNS++TA V
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
EN L E F +M G F PDET+MV++LSAC G LSLG+ VH QV++R + L+C+
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCR 248
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSEN 305
LGTALVDMY KSG L YARLVFERM +NV TWSAMI+GLAQ+GFAEEAL LF +MM E+
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
++RPNYVT+LGVLCACSH G+VD+GY+YF EME +H IKP+M+HYGAMVDI GRAG L
Sbjct: 309 --SVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRL 366
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVA 425
EAY+FI+ MP PD +VWRTLLSACS+H D GIG+KV+K L+ +EP+R GNLVIVA
Sbjct: 367 NEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVA 426
Query: 426 NLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLD 485
N +AEA MW AA VRRVM++ MKK+AGESC++LGGS RFF+GYD R + + +Y LLD
Sbjct: 427 NRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Query: 486 GLNLHL 491
L
Sbjct: 487 LFKFQL 492
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 351 bits (901), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 294/488 (60%), Gaps = 7/488 (1%)
Query: 8 NKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKN-LTHARKLV 66
N + L++ C S+ +L QIQA + I H + +++L+ C+ SP+++ +++AR L
Sbjct: 28 NTQNPILLISKCNSLRELMQIQA-YAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLF 86
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
+ P + +N + RG++ +P+E +F ++ E G+ P+ TFP LLK CAV AL
Sbjct: 87 EAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
EG+Q+H ++K GLD +VYV LIN Y C+ + AR VFD + E V +N++IT
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ + F +M+G +P+E +++ +LS+CA LG L LG+W+H +
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
+ TAL+DM+ K G+L A +FE+M ++ WSAMI+ A HG AE+++ +FE M
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-- 324
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+N++P+ +T+LG+L ACSH G V+EG +YF +M GI P + HYG+MVD+ RAG L
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVAN 426
+AYEFI +P++P P++WR LL+ACS H+ D + +KV + + ++ GG+ VI++N
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLD---LAEKVSERIFELDDSHGGDYVILSN 441
Query: 427 LYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDG 486
LYA WE ++R+VM+D K+ G S +++ + FF+G + ++ LD
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 487 LNLHLKMA 494
+ LK++
Sbjct: 502 MVKELKLS 509
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 290/490 (59%), Gaps = 14/490 (2%)
Query: 11 QCLSLLNL--CRSIDQLHQIQAQFHIHGHYHNTYLLSE--LVYVCSLSPSKNLTHARKLV 66
+C++LL SI +L QI A HG + L + + Y+ SL +++A K+
Sbjct: 17 KCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVF 76
Query: 67 LHSATPSPIS---WNILIRGFATSDSPIEAIWVFRKMRERG-VKPNKLTFPFLLKCCAVG 122
S PI+ WN LIRG+A + I A ++R+MR G V+P+ T+PFL+K
Sbjct: 77 --SKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI 182
+ +R G+ +H+ ++ G S +YV N+L++ Y C + A KVFD+MPE+ V+WNSVI
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
EN + + + +M G +PD ++V +LSACA++G L+LG+ VH ++ G+
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
+ L+D+Y + G + A+ +F+ M +N ++W+++I+GLA +GF +EA+ LF+ M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
E+ + + P +T++G+L ACSH GMV EG+ YFR M + I+P + H+G MVD+ RA
Sbjct: 315 -ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 363 GLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLV 422
G +++AYE+I+SMP+ P+ ++WRTLL AC+VH D + + R ++L +EP G+ V
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD---LAEFARIQILQLEPNHSGDYV 430
Query: 423 IVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYH 482
+++N+YA W +R+ M G+KK+ G S V++G + F G S P +Y
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 483 LLDGLNLHLK 492
L + L+
Sbjct: 491 KLKEMTGRLR 500
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/495 (39%), Positives = 276/495 (55%), Gaps = 20/495 (4%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHN---TYLLSELVYVCSLSPSKNLTHARKLVLHS 69
SL C + QL Q+ A F + Y T L + S S S ++ +A ++
Sbjct: 52 FSLAETCSDMSQLKQLHA-FTLRTTYPEEPATLFLYGKILQLSSSFS-DVNYAFRVFDSI 109
Query: 70 ATPSPISWNILIRGFATSDS-PIEAIWVFRKMRERG-VKPNKLTFPFLLKCCAVGSALRE 127
S WN LIR A S EA ++RKM ERG P+K TFPF+LK CA E
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
GKQVH VK G DVYV N LI+ YG C + ARKVFDEMPER+ VSWNS+I A V
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR---GMVLS 244
++ F +M+ S FEPD +M +LSACA LG LSLG W H ++ + + +
Sbjct: 230 FGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+ +L++MY K G+L A VF+ M+KR++ +W+AMILG A HG AEEA++ F+ M +
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
+N+RPN VT++G+L AC+H G V++G +YF M + I+P + HYG +VD+ RAG
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACSVHDAH-------DRTGIGDKVRKELLLVEPRR 417
+ EA + + SMP+ PD ++WR+LL AC A R IG K E
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE--SSNGNC 466
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDL 477
G V+++ +YA A W VR++M + G++K G S +++ G FFAG S P
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 526
Query: 478 IPVYHLLDGLNLHLK 492
+Y L ++ L+
Sbjct: 527 KQIYQQLKVIDDRLR 541
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 318 bits (816), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 281/529 (53%), Gaps = 55/529 (10%)
Query: 16 LNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSP--SKNLTHARKLVLHSATPS 73
+N CR+I L QI A F G +T +E++ C+ S ++L +A K+ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 74 PISWNILIRGFATSDSPIEAIWV---FRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
SWN +IRGF+ SD I + + M + V+PN+ TFP +LK CA ++EGKQ
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRC-----------KKILD----------------- 162
+H A+K+G D +V +NL+ Y C K I++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 163 -----------------ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
AR +FD+M +R+ VSWN++I+ N + +D VE F +M+
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
P+ ++V +L A + LG L LG W+H G+ + LG+AL+DMY K G + A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 266 LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
VFER+ + NV+TWSAMI G A HG A +A+ F M + +RP+ V Y+ +L ACSH
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA--GVRPSDVAYINLLTACSH 387
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWR 385
G+V+EG RYF +M V G++P + HYG MVD+ GR+GLL EA EFI +MP+ PD ++W+
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 386 TLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
LL AC + +G +V L+ + P G V ++N+YA G W + +R M+
Sbjct: 448 ALLGACRM---QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 446 DGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
+ ++K G S +D+ G + F DS P + +L ++ L++A
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 155/341 (45%), Gaps = 72/341 (21%)
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK---KILD-ARKVF 167
FP + C +R+ Q+HA +K G D ++ F + LD A K+F
Sbjct: 27 FPQINNC----RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 168 DEMPERTPVSWNSVITACVENLWLRD--GVEYFLKMRGSGF-EPDETSMVLMLSACAELG 224
++MP+R SWN++I E+ + + F +M F EP+ + +L ACA+ G
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 225 YLSLGRWVH------------------------C------------QVVLRGMVLSCQ-- 246
+ G+ +H C ++ + MV+
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 247 -------LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
L ++D Y + G AR++F++M +R+V++W+ MI G + +GF ++A+ +F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH------GIKPLMVHYG 353
M + +IRPNYVT + VL A S G ++ G E++H GI+ V
Sbjct: 263 REMKKG--DIRPNYVTLVSVLPAISRLGSLELG-------EWLHLYAEDSGIRIDDVLGS 313
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
A++D+Y + G++ +A + +P + I W +++ ++H
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 315 bits (807), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 267/502 (53%), Gaps = 37/502 (7%)
Query: 8 NKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVL 67
N + +S L C ++L QI A+ G ++Y +++ + C S S + ++V
Sbjct: 13 NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 68 HS-ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
P WN++IRGF+ SD P ++ ++++M N TFP LLK C+ SA
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
E Q+HA K G ++DVY N+LIN Y A +FD +PE VSWNSVI V
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 187 EN-------------------LWL------------RDGVEYFLKMRGSGFEPDETSMVL 215
+ W ++ ++ F +M+ S EPD S+
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
LSACA+LG L G+W+H + + + LG L+DMY K G + A VF+ ++K++
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
V W+A+I G A HG EA+S F M + I+PN +T+ VL ACS+ G+V+EG
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKM--GIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
F ME + +KP + HYG +VD+ GRAGLL EA FIQ MP+ P+ ++W LL AC +
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI-- 428
Query: 396 AHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGE 455
H +G+++ + L+ ++P GG V AN++A W++AA RR+M++ G+ K+ G
Sbjct: 429 -HKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 456 SCVDLGGSMIRFFAGYDSRPDL 477
S + L G+ F AG S P++
Sbjct: 488 STISLEGTTHEFLAGDRSHPEI 509
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/491 (34%), Positives = 279/491 (56%), Gaps = 11/491 (2%)
Query: 1 MNTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYV-CSLSPSKNL 59
M T+ +N +++ + QL Q+ A + G+ + LL++L+ + CS ++ +
Sbjct: 1 MTTKVAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACS---ARAI 57
Query: 60 THARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCC 119
+ L L P +N +I+ + P+ + +R+M V P+ TF ++K C
Sbjct: 58 AYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
A SALR GK VH AV G D YV L+ FY +C + AR+VFD MPE++ V+WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
S+++ +N + ++ F +MR SGFEPD + V +LSACA+ G +SLG WVH ++
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ L+ +LGTAL+++Y + G +G AR VF++M++ NV W+AMI HG+ ++A+ LF
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
M ++ I PN VT++ VL AC+HAG+V+EG ++ M + + P + H+ MVD+
Sbjct: 298 NKMEDDCGPI-PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356
Query: 360 GRAGLLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
GRAG L EAY+FI + P +W +L AC +H +D +G ++ K L+ +EP
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYD---LGVEIAKRLIALEPD 413
Query: 417 RGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
G+ V+++N+YA +G + +++R M ++K G S +++ F G +S +
Sbjct: 414 NPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQE 473
Query: 477 LIPVYHLLDGL 487
+Y L+ L
Sbjct: 474 TGEIYRYLETL 484
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/494 (36%), Positives = 281/494 (56%), Gaps = 22/494 (4%)
Query: 9 KNQCLSLLNLCRSIDQLHQIQAQF-HIHGHYHNTYLLSELVYVCSLSPSKN-LTHARKLV 66
+ +CL LL C +ID+ Q+ A+F + Y +++ S ++ C+ S +N + +A +
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
P +N +IRG+ S EA+ + +M +RG +P+ T+P LLK C ++R
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
EGKQ+H K GL++DV+V N+LIN YGRC ++ + VF+++ +T SW+S+++A
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA-- 207
Query: 187 ENLWLRDGV----EYFLKMRG----SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
R G+ E L RG + + +E+ MV L ACA G L+LG +H ++
Sbjct: 208 -----RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
L+ + T+LVDMY K G L A +F++MEKRN LT+SAMI GLA HG E AL +
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F M + + + P++V Y+ VL ACSH+G+V EG R F EM ++P HYG +VD+
Sbjct: 323 FSKMIK--EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRG 418
GRAGLL EA E IQS+P+ + ++WRT LS C V + +G +ELL +
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIE---LGQIAAQELLKLSSHNP 437
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLI 478
G+ ++++NLY++ MW+ A R + G+K+ G S V+L G RF + S P
Sbjct: 438 GDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCK 497
Query: 479 PVYHLLDGLNLHLK 492
+Y +L + LK
Sbjct: 498 EIYKMLHQMEWQLK 511
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 274/490 (55%), Gaps = 9/490 (1%)
Query: 9 KNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARK 64
K ++++++ ++ L I IHG+ + S + +L + +L AR+
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
L + +SWN +I + +++P EA+ +F+KM + GVKP ++ L CA
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
L G+ +H +V+ GLD +V V N+LI+ Y +CK++ A +F ++ RT VSWN++I
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
+N D + YF +MR +PD + V +++A AEL +W+H V+ + +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+ TALVDMY K GA+ ARL+F+ M +R+V TW+AMI G HGF + AL LFE M +
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
I+PN VT+L V+ ACSH+G+V+ G + F M+ + I+ M HYGAMVD+ GRAG
Sbjct: 533 G--TIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIV 424
L EA++FI MPV P V+ +L AC + H +K + L + P GG V++
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQI---HKNVNFAEKAAERLFELNPDDGGYHVLL 647
Query: 425 ANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLL 484
AN+Y A MWE+ VR M G++K G S V++ + FF+G + PD +Y L
Sbjct: 648 ANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFL 707
Query: 485 DGLNLHLKMA 494
+ L H+K A
Sbjct: 708 EKLICHIKEA 717
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 182/345 (52%), Gaps = 5/345 (1%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSP 74
LL C S+ +L QI +G Y + ++LV + ++ A ++ +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL--FCRYGSVDEAARVFEPIDSKLN 100
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ ++ +++GFA +A+ F +MR V+P F +LLK C + LR GK++H
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
VK G D++ L N Y +C+++ +ARKVFD MPER VSWN+++ +N R
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+E M +P ++V +L A + L +S+G+ +H + G + TALVDM
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G+L AR +F+ M +RNV++W++MI Q+ +EA+ +F+ M + + ++P V
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD--EGVKPTDV 338
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
+ +G L AC+ G ++ G R+ ++ G+ + +++ +Y
Sbjct: 339 SVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMY 382
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 183/376 (48%), Gaps = 49/376 (13%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
+ + ARK+ +SWN ++ G++ + A+ + + M E +KP+ +T +L
Sbjct: 184 RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVL 243
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
+ + GK++H A++ G DS V + L++ Y +C + AR++FD M ER V
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
SWNS+I A V+N ++ + F KM G +P + S++ L ACA+LG L GR++H
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
V G+ + + +L+ MY K + A +F +++ R +++W+AMILG AQ+G +AL
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI-------KPLM 349
+ F M ++P+ TY+ V+ A + + +++HG+ K +
Sbjct: 424 NYFSQMRSR--TVKPDTFTYVSVITAIAELSITHHA-------KWIHGVVMRSCLDKNVF 474
Query: 350 V------------------------------HYGAMVDIYGRAGLLREAYEFIQSM---P 376
V + AM+D YG G + A E + M
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 377 VNPDPIVWRTLLSACS 392
+ P+ + + +++SACS
Sbjct: 535 IKPNGVTFLSVISACS 550
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 272/508 (53%), Gaps = 43/508 (8%)
Query: 21 SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNIL 80
++ L Q I G + +++ + CS + +L +A + H P+ N +
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACS--NAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 81 IRGFATSDSPIE---AIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVK 137
IR + D P AI V+RK+ KP+ TFPF+LK S + G+Q+H V
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 138 FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP-------------------------- 171
FG DS V+V LI Y C + DARK+FDEM
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 172 -------ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELG 224
R VSW VI+ ++ + +E F +M EPDE +++ +LSACA+LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 225 YLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMIL 284
L LG + V RGM + L A++DMY KSG + A VFE + +RNV+TW+ +I
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 285 GLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHG 344
GLA HG EAL++F M + +RPN VT++ +L ACSH G VD G R F M +G
Sbjct: 325 GLATHGHGAEALAMFNRMVK--AGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 345 IKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGD 404
I P + HYG M+D+ GRAG LREA E I+SMP + +W +LL+A +VH HD +G+
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH--HDLE-LGE 439
Query: 405 KVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSM 464
+ EL+ +EP GN +++ANLY+ G W+ + +R +M+ G+KKMAGES +++ +
Sbjct: 440 RALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRV 499
Query: 465 IRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
+F +G + P + ++ +L ++L ++
Sbjct: 500 YKFISGDLTHPQVERIHEILQEMDLQIQ 527
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 266/473 (56%), Gaps = 13/473 (2%)
Query: 31 QFHIH----GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFAT 86
QFH H G + ++ + L+ S S A +L + ++W +I GF
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLI--SGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 87 SDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFG-LDSDVY 145
+ S EA+ F +M++ GV N++T +LK +R G+ VH ++ G + DV+
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
+G++L++ YG+C DA+KVFDEMP R V+W ++I V++ G+ F +M S
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
P+E ++ +LSACA +G L GR VHC ++ + ++ GT L+D+Y K G L A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 266 LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
LVFER+ ++NV TW+AMI G A HG+A +A LF M +H + PN VT++ VL AC+H
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSH--VSPNEVTFMAVLSACAH 419
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWR 385
G+V+EG R F M+ ++P HY MVD++GR GLL EA I+ MP+ P +VW
Sbjct: 420 GGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWG 479
Query: 386 TLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
L +C +H ++ +G ++ ++P G ++ANLY+E+ W+ A VR+ M+
Sbjct: 480 ALFGSCLLHKDYE---LGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 446 DGGMKKMAGESCVDLGGSMIRFFAGYDSRP-DLIPVYHLLDGLNLHLKMANEL 497
D + K G S +++ G + F A D +P + +Y LD + + +++ +EL
Sbjct: 537 DQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDEL 589
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 211/439 (48%), Gaps = 57/439 (12%)
Query: 43 LLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIE--AIWVFRKM 100
LS L+ C + ++ +AR+L+ T S W+ LI F+ + + +R M
Sbjct: 37 FLSRLLRRCCTAATQ-FRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHM 95
Query: 101 RERGVKPNKLTFPFLLKCCAVGSALREGK--QVHADAVKFGLDSDVYVGNNLINFYGRCK 158
R GV P++ TFP LLK LR+ Q HA VKFGLDSD +V N+LI+ Y
Sbjct: 96 RRNGVIPSRHTFPPLLKAVF---KLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSG 152
Query: 159 KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLS 218
A ++FD ++ V+W ++I V N + + YF++M+ +G +E ++V +L
Sbjct: 153 LFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLK 212
Query: 219 ACAELGYLSLGRWVHCQVVLRGMVLSCQ--LGTALVDMYGKSGALGYARLVFERMEKRNV 276
A ++ + GR VH + G V C +G++LVDMYGK A+ VF+ M RNV
Sbjct: 213 AAGKVEDVRFGRSVHGLYLETGRV-KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV 271
Query: 277 LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYF 336
+TW+A+I G Q ++ + +FE M ++ ++ PN T VL AC+H G + G R
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEMLKS--DVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 337 -------REMEYVHGIKPLMVH-----------------------YGAMVDIYGRAGLLR 366
E+ G + ++ + AM++ + G R
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 367 EAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR-----RG 418
+A++ +M V+P+ + + +LSAC AH G+ ++ R+ L ++ R +
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSAC----AHG--GLVEEGRRLFLSMKGRFNMEPKA 443
Query: 419 GNLVIVANLYAEAGMWERA 437
+ + +L+ G+ E A
Sbjct: 444 DHYACMVDLFGRKGLLEEA 462
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 269/499 (53%), Gaps = 39/499 (7%)
Query: 9 KNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLH 68
+N + L +S ++ +I A IHG ++++++++V C +++ +A +L
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD--KIEDMDYATRLFNQ 67
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVK-PNKLTFPFLLKCCAVGSALRE 127
+ P+ +N +IR + + + I +++++ + + P++ TFPF+ K CA +
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
GKQVH KFG V N LI+ Y + ++DA KVFDEM ER +SWNS+++
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 188 NLWLR-------------------------------DGVEYFLKMRGSGFEPDETSMVLM 216
++ + +++F +M+ +G EPDE S++ +
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 217 LSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNV 276
L +CA+LG L LG+W+H RG + + AL++MY K G + A +F +ME ++V
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 277 LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYF 336
++WS MI G A HG A A+ F M ++PN +T+LG+L ACSH GM EG RYF
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 337 REMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDA 396
M + I+P + HYG ++D+ RAG L A E ++MP+ PD +W +LLS+C
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 397 HDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES 456
D + L+ +EP GN V++AN+YA+ G WE + +R+++R+ MKK G S
Sbjct: 426 LDVALVA---MDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Query: 457 CVDLGGSMIRFFAGYDSRP 475
+++ + F +G +S+P
Sbjct: 483 LIEVNNIVQEFVSGDNSKP 501
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/464 (36%), Positives = 259/464 (55%), Gaps = 9/464 (1%)
Query: 24 QLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRG 83
QL +I A G LL++L+ +L ++ +AR++ P WN L +G
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLE--NLVVIGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 84 FATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSD 143
+ + P E++ +++KMR+ GV+P++ T+PF++K + G +HA VK+G
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 144 VYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
V L+ Y + ++ A +F+ M + V+WN+ + CV+ +EYF KM
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
+ D ++V MLSAC +LG L +G ++ + + + + A +DM+ K G
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 264 ARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
AR++FE M++RNV++WS MI+G A +G + EAL+LF M ++ +RPNYVT+LGVL AC
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM--QNEGLRPNYVTFLGVLSAC 321
Query: 324 SHAGMVDEGYRYFREMEYVH--GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDP 381
SHAG+V+EG RYF M + ++P HY MVD+ GR+GLL EAYEFI+ MPV PD
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 382 IVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVR 441
+W LL AC+VH D +G KV L+ P G V+++N+YA AG W+ VR
Sbjct: 382 GIWGALLGACAVH--RDMI-LGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 442 RVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLD 485
MR G KK+A S V+ G + F G S P +Y LD
Sbjct: 439 SKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 275/522 (52%), Gaps = 42/522 (8%)
Query: 2 NTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTH 61
NT LS + +S+L C++I + I A+ H + +++ EL+ VCS S + +
Sbjct: 22 NTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDS--VDY 79
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
A + + + P+ + +I GF +S + + ++ +M V P+ +LK C
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD- 138
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS---- 177
L+ +++HA +K G S VG ++ YG+ ++++A+K+FDEMP+R V+
Sbjct: 139 ---LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 178 ---------------------------WNSVITACVENLWLRDGVEYFLKMRGSGFEPDE 210
W ++I V N + +E F +M+ +E
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER 270
+ V +LSAC++LG L LGRWVH V + M LS +G AL++MY + G + AR VF
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 271 MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVD 330
M ++V++++ MI GLA HG + EA++ F M + RPN VT + +L ACSH G++D
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMV--NRGFRPNQVTLVALLNACSHGGLLD 373
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
G F M+ V ++P + HYG +VD+ GR G L EAY FI+++P+ PD I+ TLLSA
Sbjct: 374 IGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSA 433
Query: 391 CSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMK 450
C +H + +G+K+ K L E G V+++NLYA +G W+ + +R MRD G++
Sbjct: 434 CKIHGNME---LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Query: 451 KMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
K G S +++ + F G + P +Y L LN L+
Sbjct: 491 KEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 278/520 (53%), Gaps = 40/520 (7%)
Query: 9 KNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLH 68
K+ ++LL+ + ++ QI A+ ++ G + +L+ V +LS K L +A +++
Sbjct: 6 KHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDR 65
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG--VKPNKLTFPFLLKCCAVGSALR 126
S P+ + N +IR S P ++ +R++ G +KP+ T FL++ C G +R
Sbjct: 66 SEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC-TGLRMR 124
Query: 127 E-GKQVHADAVKFGLDSDVYVGNNLINFY------------------------------- 154
E G QVH ++ G D+D +V LI+ Y
Sbjct: 125 ETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTAC 184
Query: 155 GRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMV 214
RC ++ ARK+F+ MPER P++WN++I+ + R+ + F M+ G + + +M+
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR 274
+LSAC +LG L GRW H + + ++ +L T LVD+Y K G + A VF ME++
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 275 NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR 334
NV TWS+ + GLA +GF E+ L LF +M + D + PN VT++ VL CS G VDEG R
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQ--DGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 335 YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
+F M GI+P + HYG +VD+Y RAG L +A IQ MP+ P VW +LL A ++
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
Query: 395 DAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAG 454
+ +G K++L +E G V+++N+YA++ W+ ++VR+ M+ G++K G
Sbjct: 423 KNLE---LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPG 479
Query: 455 ESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
S +++ G + FF G S P + + ++ L++A
Sbjct: 480 CSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLA 519
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 288 bits (737), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 255/497 (51%), Gaps = 38/497 (7%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
+S L+ C +++Q+ QI G + Y+L++L+ + +AR+++
Sbjct: 53 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+P W +IRG+A EAI ++ MR+ + P TF LLK C L G+Q H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI---------- 182
A + VYVGN +I+ Y +C+ I ARKVFDEMPER +SW +I
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 183 ---------------------TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
T +N ++ +EYF +M SG DE ++ +SACA
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 222 ELGYLSLGRWVHCQVVLRGMVLS--CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTW 279
+LG G S +G+AL+DMY K G + A VF M +NV T+
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
S+MILGLA HG A+EAL LF M I+PN VT++G L ACSH+G+VD+G + F M
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMV-TQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 340 EYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
G++P HY MVD+ GR G L+EA E I++M V P VW LL AC +H+ +
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPE- 470
Query: 400 TGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES-CV 458
I + + L +EP GN ++++N+YA AG W VR+++++ G+KK S V
Sbjct: 471 --IAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 459 DLGGSMIRFFAGYDSRP 475
D G M +FF G + P
Sbjct: 529 DKNGQMHKFFPGNLNHP 545
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 267/523 (51%), Gaps = 52/523 (9%)
Query: 8 NKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCS-----LSPSKNLTHA 62
N+ S+L+ C ++ +++ +H + LS+ VY+ S S N+ A
Sbjct: 151 NEYSFASVLSACSGLNDMNK---GVQVHSLIAKSPFLSD-VYIGSALVDMYSKCGNVNDA 206
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
+++ + +SWN LI F + +EA+ VF+ M E V+P+++T ++ CA
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266
Query: 123 SALREGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMP---------- 171
SA++ G++VH VK L +D+ + N ++ Y +C +I +AR +FD MP
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 172 ---------------------ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDE 210
ER VSWN++I +N + + F ++ P
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ------LGTALVDMYGKSGALGYA 264
S +L ACA+L L LG H V+ G +G +L+DMY K G +
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 265 RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACS 324
LVF +M +R+ ++W+AMI+G AQ+G+ EAL LF M E+ + +P+++T +GVL AC
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE--KPDHITMIGVLSACG 504
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVW 384
HAG V+EG YF M G+ PL HY MVD+ GRAG L EA I+ MP+ PD ++W
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIW 564
Query: 385 RTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVM 444
+LL+AC V H +G V ++LL VEP G V+++N+YAE G WE NVR+ M
Sbjct: 565 GSLLAACKV---HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Query: 445 RDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
R G+ K G S + + G F S P ++ LLD L
Sbjct: 622 RKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 46/353 (13%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
+WN ++ GFA D EA+ F M + G N+ +F +L C+ + + +G QVH+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
K SDVY+G+ L++ Y +C + DA++VFDEM +R VSWNS+IT +N + +
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV----LRGMVLSCQLGTAL 251
+ F M S EPDE ++ ++SACA L + +G+ VH +VV LR ++ L A
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII---LSNAF 295
Query: 252 VDMYGKSGAL-----------------------GY--------ARLVFERMEKRNVLTWS 280
VDMY K + GY ARL+F +M +RNV++W+
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWN 355
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACS-----HAGMVDEGYRY 335
A+I G Q+G EEALSLF ++ +++ P + ++ +L AC+ H GM +
Sbjct: 356 ALIAGYTQNGENEEALSLFCLL--KRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
++ G + + +++D+Y + G + E Y + M + D + W ++
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 33/280 (11%)
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA---- 184
+ VHA +K G +++++ N LI+ Y +C + D R+VFD+MP+R +WNSV+T
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 185 ------------------CVENLWL---------RDGVEYFLKMRGSGFEPDETSMVLML 217
C N + + + YF M GF +E S +L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 218 SACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVL 277
SAC+ L ++ G VH + + +G+ALVDMY K G + A+ VF+ M RNV+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 278 TWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFR 337
+W+++I Q+G A EAL +F+MM E+ + P+ VT V+ AC+ + G
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESR--VEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 338 EMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPV 377
+ ++ ++ A VD+Y + ++EA SMP+
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 83/292 (28%)
Query: 198 FLKMRG--SGFEPDETSMVLMLSACAELGYLSL-GRWVHCQVVLRGMVLSCQLGTALVDM 254
FLK+ S F D + +L +C + ++ R+VH V+ G + L+D
Sbjct: 6 FLKLAADLSSF-TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE---------- 304
Y K G+L R VF++M +RN+ TW++++ GL + GF +EA SLF M E
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 305 ----NHDNIRP---------------NYVTYLGVLCAC---------------------- 323
HD N ++ VL AC
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 324 -------------SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
S G V++ R F EM G + + V + +++ + + G EA +
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEM----GDRNV-VSWNSLITCFEQNGPAVEALD 239
Query: 371 FIQSM---PVNPDPIVWRTLLSACSV-------HDAHDRTGIGDKVRKELLL 412
Q M V PD + +++SAC+ + H R DK+R +++L
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 248/466 (53%), Gaps = 13/466 (2%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHS 69
+LL C L IQ + +H H + ++V +L + +L ARK+
Sbjct: 65 TLLKKCTVFKLL--IQGRI-VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
++W LI G++ D P +A+ F +M G PN+ T ++K A G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
Q+H VK G DS+V+VG+ L++ Y R + DA+ VFD + R VSWN++I
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+E F M GF P S + AC+ G+L G+WVH ++ G L G
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
L+DMY KSG++ AR +F+R+ KR+V++W++++ AQHGF +EA+ FE M I
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV--GI 359
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
RPN +++L VL ACSH+G++DEG+ Y+ M+ GI P HY +VD+ GRAG L A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
FI+ MP+ P +W+ LL+AC + H T +G + + ++P G VI+ N+YA
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRM---HKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
G W AA VR+ M++ G+KK S V++ ++ F A + P
Sbjct: 476 SGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 261/498 (52%), Gaps = 43/498 (8%)
Query: 26 HQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFA 85
H ++ + + H HN + + C ++ +ARK+ S +SWN LI G+
Sbjct: 181 HVLKLRLELVSHVHNASI--HMFASCG-----DMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 86 TSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVY 145
+AI+V++ M GVKP+ +T L+ C++ L GK+ + + GL +
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPERTPVSW--------------------------- 178
+ N L++ + +C I +AR++FD + +RT VSW
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 179 ----NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
N++I V+ +D + F +M+ S +PDE +M+ LSAC++LG L +G W+H
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ + L+ LGT+LVDMY K G + A VF ++ RN LT++A+I GLA HG A
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
A+S F M + I P+ +T++G+L AC H GM+ G YF +M+ + P + HY
Sbjct: 474 AISYFNEMIDA--GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
MVD+ GRAGLL EA ++SMP+ D VW LL C + H +G+K K+LL ++
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM---HGNVELGEKAAKKLLELD 588
Query: 415 PRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSR 474
P G V++ +Y EA MWE A RR+M + G++K+ G S +++ G + F SR
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSR 648
Query: 475 PDLIPVYHLLDGLNLHLK 492
P+ +Y L L H++
Sbjct: 649 PESEKIYDRLHCLGRHMR 666
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 210/428 (49%), Gaps = 40/428 (9%)
Query: 2 NTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTH 61
+T S N LSLL C+ + L QIQAQ I+G + + S L+ C+LS S+ L +
Sbjct: 46 STHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDY 105
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGV---KPNKLTFPFLLKC 118
+ K++ P+ SWN+ IRGF+ S++P E+ ++++M G +P+ T+P L K
Sbjct: 106 SVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA G + +K L+ +V N I+ + C + +ARKVFDE P R VSW
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N +I + + + M G +PD+ +M+ ++S+C+ LG L+ G+ + V
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR------------------------ 274
G+ ++ L AL+DM+ K G + AR +F+ +EKR
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345
Query: 275 -------NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
+V+ W+AMI G Q ++AL+LF+ M + N +P+ +T + L ACS G
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS--NTKPDEITMIHCLSACSQLG 403
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYG-AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRT 386
+D G R +E L V G ++VD+Y + G + EA + + + +
Sbjct: 404 ALDVGIWIHRYIEKYS--LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTA 460
Query: 387 LLSACSVH 394
++ ++H
Sbjct: 461 IIGGLALH 468
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 252/459 (54%), Gaps = 9/459 (1%)
Query: 36 GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
G H+ ++ L+ + S S L A KL S ++W L G+ TS EAI
Sbjct: 141 GFNHDVAAMTSLLSI--YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
+F+KM E GVKP+ +L C L G+ + + + + +V L+N Y
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
+C K+ AR VFD M E+ V+W+++I N + ++G+E FL+M +PD+ S+V
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
LS+CA LG L LG W + + + + AL+DMY K GA+ VF+ M++++
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
++ +A I GLA++G + + ++F + I P+ T+LG+LC C HAG++ +G R+
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKL--GISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS-VH 394
F + V+ +K + HYG MVD++GRAG+L +AY I MP+ P+ IVW LLS C V
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVK 496
Query: 395 DAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAG 454
D T + + V KEL+ +EP GN V ++N+Y+ G W+ AA VR +M GMKK+ G
Sbjct: 497 D----TQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 552
Query: 455 ESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKM 493
S ++L G + F A S P +Y L+ L +++
Sbjct: 553 YSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 193/369 (52%), Gaps = 5/369 (1%)
Query: 7 SNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
S Q +L+++ +++ L QI H +H+T+L++ L+ + ++ L
Sbjct: 11 SKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFF--RQTKYSYLLF 68
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
H+ P+ +N LI GF + E + +F +R+ G+ + TFP +LK C S+ +
Sbjct: 69 SHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRK 128
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
G +H+ VK G + DV +L++ Y ++ DA K+FDE+P+R+ V+W ++ +
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ R+ ++ F KM G +PD +V +LSAC +G L G W+ + M +
Sbjct: 189 TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
+ T LV++Y K G + AR VF+ M +++++TWS MI G A + F +E + LF M +
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ-- 306
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+N++P+ + +G L +C+ G +D G ++ H + A++D+Y + G +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMA 365
Query: 367 EAYEFIQSM 375
+E + M
Sbjct: 366 RGFEVFKEM 374
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 227/368 (61%), Gaps = 4/368 (1%)
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
+R G+ +H+ ++ G S +YV N+L++ Y C + A KVFD+MPE+ V+WNSVI
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
EN + + + +M G +PD ++V +LSACA++G L+LG+ VH ++ G+ +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
L+D+Y + G + A+ +F+ M +N ++W+++I+GLA +GF +EA+ LF+ M E
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM-E 182
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
+ + + P +T++G+L ACSH GMV EG+ YFR M + I+P + H+G MVD+ RAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIV 424
+++AYE+I+SMP+ P+ ++WRTLL AC+VH D + + R ++L +EP G+ V++
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD---LAEFARIQILQLEPNHSGDYVLL 299
Query: 425 ANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLL 484
+N+YA W +R+ M G+KK+ G S V++G + F G S P +Y L
Sbjct: 300 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Query: 485 DGLNLHLK 492
+ L+
Sbjct: 360 KEMTGRLR 367
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
++WN +I GFA + P EA+ ++ +M +G+KP+ T LL CA AL GK+VH
Sbjct: 55 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 114
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+K GL +++ N L++ Y RC ++ +A+ +FDEM ++ VSW S+I N + ++
Sbjct: 115 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 174
Query: 195 VEYFLKMRGS-GFEPDETSMVLMLSACAELGYLSLG----RWVHCQVVLRGMV--LSCQL 247
+E F M + G P E + V +L AC+ G + G R + + + + C
Sbjct: 175 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC-- 232
Query: 248 GTALVDMYGKSGALGYARLVFERMEKR-NVLTWSAMILGLAQHGFAEEA 295
+VD+ ++G + A + M + NV+ W ++ HG ++ A
Sbjct: 233 ---MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 247/460 (53%), Gaps = 10/460 (2%)
Query: 33 HIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSATPSPISWNILIRGFATSD 88
IHG + L + CSL + L AR++ P SWN++I G A +
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 89 SPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGN 148
EA+ VF +MR G P+ ++ LL AL +G Q+H+ +K+G +D+ V N
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 149 NLINFYGRCKKILDARKVFDEMPERT-PVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
+L+ Y C + +F++ VSWN+++TAC+++ + + F M S E
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
PD +M +L C E+ L LG VHC + G+ + L+DMY K G+LG AR +
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
F+ M+ R+V++WS +I+G AQ GF EEAL LF+ M I PN+VT++GVL ACSH G
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA--GIEPNHVTFVGVLTACSHVG 588
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTL 387
+V+EG + + M+ HGI P H +VD+ RAG L EA FI M + PD +VW+TL
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 388 LSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDG 447
LSAC + K + +L ++P V++ +++A +G WE AA +R M+
Sbjct: 649 LSACKT---QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 448 GMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
+KK+ G+S +++ + FFA P+ +Y +L +
Sbjct: 706 DVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 168/348 (48%), Gaps = 22/348 (6%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+L AR++ + +S+ +I G++ + EAI ++ KM + + P++ F ++K
Sbjct: 117 SLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIK 176
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
CA S + GKQ+HA +K S + N LI Y R ++ DA +VF +P + +S
Sbjct: 177 ACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
W+S+I + + + + + +M G F P+E L AC+ L G +H
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
+ + + G +L DMY + G L AR VF+++E+ + +W+ +I GLA +G+A+EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
S+F M + P+ ++ +LCA + + +G + I ++ +G +
Sbjct: 357 SVFSQMRSS--GFIPDAISLRSLLCAQTKPMALSQGMQ----------IHSYIIKWGFLA 404
Query: 357 DI---------YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
D+ Y L + + N D + W T+L+AC H+
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 17/286 (5%)
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM 170
T+ L+ C+ +L +G+++H + D + N++++ YG+C + DAR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 171 PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR 230
PER VS+ SVIT +N + + +LKM PD+ + ++ ACA + LG+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 231 WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
+H QV+ AL+ MY + + A VF + +++++WS++I G +Q G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 291 FAEEALS-LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHG--IKP 347
F EALS L EM+S PN + L ACS D G + +HG IK
Sbjct: 249 FEFEALSHLKEMLS--FGVFHPNEYIFGSSLKACSSLLRPDYGSQ-------IHGLCIKS 299
Query: 348 LMVHYG----AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
+ ++ D+Y R G L A + PD W +++
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIA 344
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 147/324 (45%), Gaps = 22/324 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGV-KPNKLTFPFLLKCCAVGSALRE--GKQV 131
ISW+ +I GF+ EA+ ++M GV PN+ F LK C+ S LR G Q+
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS--SLLRPDYGSQI 292
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H +K L + G +L + Y RC + AR+VFD++ SWN +I N +
Sbjct: 293 HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYA 352
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+ V F +MR SGF PD S+ +L A + LS G +H ++ G + + +L
Sbjct: 353 DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSL 412
Query: 252 VDMYGKSGALGYARLVFERMEKR-NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+ MY L +FE + ++W+ ++ QH E L LF++M +
Sbjct: 413 LTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE--CE 470
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH------GIKPLMVHYGAMVDIYGRAGL 364
P+++T +L C + G + VH G+ P ++D+Y + G
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQ-------VHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 365 LREAYEFIQSMPVNPDPIVWRTLL 388
L +A SM N D + W TL+
Sbjct: 524 LGQARRIFDSMD-NRDVVSWSTLI 546
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Query: 173 RTPVSWNSVITACVENLWLRDGVEYF-LKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
+T N I + ++ + R+ +E F + S F+ + + ++ AC+ L+ GR
Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H ++ L ++ MYGK G+L AR VF+ M +RN+++++++I G +Q+G
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
EA+ L+ M + +++ P+ + ++ AC+ + V G + ++ + L+
Sbjct: 149 GAEAIRLYLKMLQ--EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
A++ +Y R + +A +P+ D I W ++++ S
Sbjct: 207 -NALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAGFS 245
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 240/441 (54%), Gaps = 7/441 (1%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATS-DSPIEAIWVFRKMRERG-VKPNKLT 111
S ++ RK+ S +SW LI G+ + + EAI +F +M +G V+PN T
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
F K C S R GKQV A K GL S+ V N++I+ + + ++ DA++ F+ +
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
E+ VS+N+ + NL + ++ + +LS A +G + G
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H QVV G+ + + AL+ MY K G++ A VF ME RNV++W++MI G A+HGF
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
A L F M E + ++PN VTY+ +L ACSH G+V EG+R+F M H IKP M H
Sbjct: 556 AIRVLETFNQMIE--EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH 613
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
Y MVD+ RAGLL +A+EFI +MP D +VWRT L AC V H T +G +++L
Sbjct: 614 YACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV---HSNTELGKLAARKIL 670
Query: 412 LVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGY 471
++P + ++N+YA AG WE + +RR M++ + K G S +++G + +F+ G
Sbjct: 671 ELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGD 730
Query: 472 DSRPDLIPVYHLLDGLNLHLK 492
+ P+ +Y LD L +K
Sbjct: 731 TAHPNAHQIYDELDRLITEIK 751
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 149/258 (57%), Gaps = 11/258 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW+ ++ + + ++AI VF + E G+ PN + +++ C+ + G+
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 135 AVKFG-LDSDVYVGNNLINFYGRCKKILD-ARKVFDEMPERTPVSWNSVITACVENLWLR 192
+K G +SDV VG +LI+ + + + + A KVFD+M E V+W +IT C++ + R
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
+ + +FL M SGFE D+ ++ + SACAEL LSLG+ +H + G+V + +LV
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLV 309
Query: 253 DMYGK---SGALGYARLVFERMEKRNVLTWSAMILGLAQH-GFAEEALSLF-EMMSENHD 307
DMY K G++ R VF+RME +V++W+A+I G ++ A EA++LF EM+++ H
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH- 368
Query: 308 NIRPNYVTYLGVLCACSH 325
+ PN+ T+ AC +
Sbjct: 369 -VEPNHFTFSSAFKACGN 385
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 93 AIWVFRKMRERGVKP-NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
A+ M G++P + +TF LLK C R GK VHA ++F ++ D + N+LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 152 NFYGRCKKILDARKVFDEMP---ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEP 208
+ Y + A VF+ M +R VSW++++ N D ++ F++ G P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTALVDMYGK-SGALGYARL 266
++ ++ AC+ ++ +GR ++ G S +G +L+DM+ K + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 267 VFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
VF++M + NV+TW+ MI Q GF EA+ F
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 255/468 (54%), Gaps = 17/468 (3%)
Query: 1 MNTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLT 60
M + S S ++CL+L++ C+S+ L QI AQ G H+TY LS+L++ LS + L+
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH---LSSTVCLS 57
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFR------KMRERGVKPNKLTFPF 114
+A ++ PS +N LI ++ + + F R V+PN+ T+P
Sbjct: 58 YALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPS 117
Query: 115 LLKCCAVGSAL-REGKQVHADAVKF--GLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
L K + R G+ +HA +KF ++ D +V L+ FY C K+ +AR +F+ +
Sbjct: 118 LFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIR 177
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
E +WN+++ A + + E L P+E S+V ++ +CA LG G W
Sbjct: 178 EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVW 237
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
H V+ + L+ +GT+L+D+Y K G L +AR VF+ M +R+V ++AMI GLA HGF
Sbjct: 238 AHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGF 297
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
+E + L++ + + P+ T++ + ACSH+G+VDEG + F M+ V+GI+P + H
Sbjct: 298 GQEGIELYKSLIS--QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEH 355
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
YG +VD+ GR+G L EA E I+ MPV P+ +WR+ L + H +R G+ K LL
Sbjct: 356 YGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFER---GEIALKHLL 412
Query: 412 LVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVD 459
+E GN V+++N+YA W R +M+D + K G S ++
Sbjct: 413 GLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 261/473 (55%), Gaps = 15/473 (3%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLH-SATPS 73
+L C S+ +L +I + I+G H+ + + L+ C++S + +L+HA+ L H + PS
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGV-KPNKLTFPFLLKCCAVGSALREGKQVH 132
WN LIRGF+ S SP+ +I + +M V +P+ TF F LK C ++ + ++H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
++ G D V +L+ Y + A KVFDEMP R VSWN V+ C ++ L
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWN-VMICCFSHVGLH 189
Query: 193 D-GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH---CQVVLRGMVLSCQLG 248
+ + + +M G D ++V +LS+CA + L++G +H C + V +
Sbjct: 190 NQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF---VS 246
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
AL+DMY K G+L A VF M KR+VLTW++MI+G HG EA+S F M +
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS--G 304
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+RPN +T+LG+L CSH G+V EG +F M + P + HYG MVD+YGRAG L +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 369 YEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLY 428
E I + + DP++WRTLL +C +H + +G+ K+L+ +E G+ V++ ++Y
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIHRNLE---LGEVAMKKLVQLEAFNAGDYVLMTSIY 421
Query: 429 AEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY 481
+ A + A++R+++R ++ + G S +++G + +F P+ +Y
Sbjct: 422 SAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIY 474
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 261/478 (54%), Gaps = 19/478 (3%)
Query: 15 LLNLCRSIDQLHQ---IQAQFHIHGHYHNTYLLSELV--YVCSLSPSKNLTHARKLVLHS 69
L+ C S +H+ I + +GH +L++ L+ YV L A +L
Sbjct: 67 LIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYV----KFNLLNDAHQLFDQM 122
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+ ISW +I ++ +A+ + M V+PN T+ +L+ C + + + +
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVR 179
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
+H +K GL+SDV+V + LI+ + + + DA VFDEM + WNS+I +N
Sbjct: 180 MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+E F +M+ +GF ++ ++ +L AC L L LG H +V L L
Sbjct: 240 RSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNN 297
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
ALVDMY K G+L A VF +M++R+V+TWS MI GLAQ+G+++EAL LFE M +
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS--GT 355
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
+PNY+T +GVL ACSHAG++++G+ YFR M+ ++GI P+ HYG M+D+ G+AG L +A
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
+ + M PD + WRTLL AC V + + K+++ ++P G +++N+YA
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRV---QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
+ W+ +R MRD G+KK G S +++ + F G +S P ++ V L+ L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 152/325 (46%), Gaps = 14/325 (4%)
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
+S+T + + R D P A+ ++ G+ + T+ L+KCC A+ E
Sbjct: 21 YSSTDQTLLLSEFTRLCYQRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
G + G +++ N LIN Y + + DA ++FD+MP+R +SW ++I+A +
Sbjct: 80 GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ +E + M P+ + +L +C +S R +HC ++ G+ +
Sbjct: 140 CKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFV 196
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+AL+D++ K G A VF+ M + + W+++I G AQ+ ++ AL LF+ M
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA-- 254
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIK--PLMVHYGAMVDIYGRAGLL 365
T VL AC+ +++ G + +VH +K ++ A+VD+Y + G L
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQ-----AHVHIVKYDQDLILNNALVDMYCKCGSL 309
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSA 390
+A M D I W T++S
Sbjct: 310 EDALRVFNQMK-ERDVITWSTMISG 333
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 284/547 (51%), Gaps = 69/547 (12%)
Query: 10 NQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS 69
+ CLSLLN C+++ L QI F +G ++Y +L+ C++S S L +AR+L+L
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 70 ATPSPISWNILIR---------------------GFATSDS-----PIEAIWVFRKMR-- 101
P +N L+R GF DS I+A+ FR +R
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 102 --------ERGVKP-------------------------NKLTFPFLLKCCAVGSALREG 128
+ G++ +++ P L+ AV +A G
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 129 KQVHADAVKFG--LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
V F L + N ++ Y + ++ A+++F EMP R VSW+++I
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
N + YF +++ +G P+E S+ +LSAC++ G G+ +H V G
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 247 LGTALVDMYGKSGALGYARLVFERM-EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
+ AL+DMY + G + ARLVFE M EKR +++W++MI GLA HG EEA+ LF M+
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+ P+ ++++ +L ACSHAG+++EG YF EM+ V+ I+P + HYG MVD+YGR+G L
Sbjct: 366 --GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVA 425
++AY+FI MP+ P IVWRTLL ACS +H + ++V++ L ++P G+LV+++
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACS---SHGNIELAEQVKQRLNELDPNNSGDLVLLS 480
Query: 426 NLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLD 485
N YA AG W+ A++R+ M +KK S V++G +M +F AG + I + L
Sbjct: 481 NAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLK 540
Query: 486 GLNLHLK 492
+ L LK
Sbjct: 541 EIILRLK 547
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 256/487 (52%), Gaps = 14/487 (2%)
Query: 14 SLLNLC---RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
+LLN C R++ ++ A + TYL + L+ L ARK++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIF--YGKCDCLEDARKVLDEMP 114
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ +SW +I ++ + EA+ VF +M KPN+ TF +L C S L GKQ
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H VK+ DS ++VG++L++ Y + +I +AR++F+ +PER VS ++I +
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ +E F ++ G P+ + +L+A + L L G+ HC V+ R + L +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+DMY K G L YAR +F+ M +R ++W+AM++G ++HG E L LF +M + ++
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM-RDEKRVK 353
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREM---EYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
P+ VT L VL CSH M D G F M EY G KP HYG +VD+ GRAG + E
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY--GTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANL 427
A+EFI+ MP P V +LL AC VH + D IG+ V + L+ +EP GN VI++NL
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVD---IGESVGRRLIEIEPENAGNYVILSNL 468
Query: 428 YAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
YA AG W NVR +M + K G S + ++ F A + P V + +
Sbjct: 469 YASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEI 528
Query: 488 NLHLKMA 494
++ +K A
Sbjct: 529 SIKMKQA 535
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 241/439 (54%), Gaps = 37/439 (8%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I GF SP +A+ +F+KM VK + +T +L CA L G+QV +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD-------------------------- 168
+ ++ ++ + N +++ Y +C I DA+++FD
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 169 -----EMPERTPVSWNSVITACVENLWLRDGVEYFLKMR-GSGFEPDETSMVLMLSACAE 222
MP++ V+WN++I+A +N + + F +++ + ++ ++V LSACA+
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
+G L LGRW+H + G+ ++ + +AL+ MY K G L +R VF +EKR+V WSAM
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV 342
I GLA HG EA+ +F M E N++PN VT+ V CACSH G+VDE F +ME
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQE--ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGI 402
+GI P HY +VD+ GR+G L +A +FI++MP+ P VW LL AC + H +
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI---HANLNL 552
Query: 403 GDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGG 462
+ LL +EPR G V+++N+YA+ G WE + +R+ MR G+KK G S +++ G
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 463 SMIRFFAGYDSRPDLIPVY 481
+ F +G ++ P VY
Sbjct: 613 MIHEFLSGDNAHPMSEKVY 631
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 204/414 (49%), Gaps = 35/414 (8%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
+SL+ C S+ QL Q G + + Y S+L + +LS +L +ARK+ P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
+ +WN LIR +A+ P+ +IW F M E PNK TFPFL+K A S+L G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H AVK + SDV+V N+LI+ Y C + A KVF + E+ VSWNS+I V+
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+E F KM + +MV +LSACA++ L GR V + + ++ L A+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLA------------------------ 287
+DMY K G++ A+ +F+ ME+++ +TW+ M+ G A
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 288 -------QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
Q+G EAL +F + + N++ N +T + L AC+ G ++ G R+
Sbjct: 334 ALISAYEQNGKPNEALIVFHEL-QLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYI 391
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
HGI+ A++ +Y + G L ++ E S+ D VW ++ ++H
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 235/431 (54%), Gaps = 25/431 (5%)
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
+SWN +I + E +++F M ++P++ TF +LK C G +L G ++H+
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHS 506
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS---------------- 177
VK G+ S+ VG +LI+ Y +C I +A K+ +R VS
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 178 ----WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
WNS+I+ V D F +M G PD+ + +L CA L LG+ +H
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
QV+ + + + + LVDMY K G L +RL+FE+ +R+ +TW+AMI G A HG E
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
EA+ LFE M +NI+PN+VT++ +L AC+H G++D+G YF M+ +G+ P + HY
Sbjct: 687 EAIQLFERMI--LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLV 413
MVDI G++G ++ A E I+ MP D ++WRTLL C++H + + ++ LL +
Sbjct: 745 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH--RNNVEVAEEATAALLRL 802
Query: 414 EPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDS 473
+P+ +++N+YA+AGMWE+ +++RR MR +KK G S V+L + F G +
Sbjct: 803 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 862
Query: 474 RPDLIPVYHLL 484
P +Y L
Sbjct: 863 HPRWEEIYEEL 873
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 171/352 (48%), Gaps = 14/352 (3%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S S ++ A +SWN ++ G+ + +++I VF M G++ + TF
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
+LK C+ G Q+H V+ G D+DV + L++ Y + K+ +++ +VF +PE+
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
VSW+++I CV+N L +++F +M+ ++ +L +CA L L LG +H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ--HGF 291
+ + TA +DMY K + A+++F+ E N +++AMI G +Q HGF
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 364
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
+AL LF + + + + ++ GV AC+ + EG + + + + +
Sbjct: 365 --KALLLFHRLMSS--GLGFDEISLSGVFRACALVKGLSEGLQIYG-LAIKSSLSLDVCV 419
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
A +D+YG+ L EA+ M D + W +++ AH++ G G
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIA------AHEQNGKG 464
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 210/445 (47%), Gaps = 38/445 (8%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL---SPSKNLTHARKLVLHSA 70
S+L C ++ +L ++ Q H H + + +V +L + N+ A+ L +S
Sbjct: 286 SVLRSCAALSEL-RLGGQLHAHA-LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ S+N +I G++ + +A+ +F ++ G+ ++++ + + CA+ L EG Q
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
++ A+K L DV V N I+ YG+C+ + +A +VFDEM R VSWN++I A +N
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ + F+ M S EPDE + +L AC G L G +H +V GM + +G +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 251 LVDMYGKSGALGYARLVFERMEKR-NV-------------------LTWSAMILGLAQHG 290
L+DMY K G + A + R +R NV ++W+++I G
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
+E+A LF M E I P+ TY VL C++ G + ++ ++ +
Sbjct: 583 QSEDAQMLFTRMMEM--GITPDKFTYATVLDTCANLASAGLGKQIHAQV-IKKELQSDVY 639
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK-- 408
+VD+Y + G L ++ + + D + W ++ + H G G++ +
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHH------GKGEEAIQLF 692
Query: 409 ELLLVEPRRGGNLVIVANLYAEAGM 433
E +++E + ++ ++ L A A M
Sbjct: 693 ERMILENIKPNHVTFISILRACAHM 717
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 42/293 (14%)
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM 170
F F+ K CA AL GKQ HA + G +V N L+ Y + + A VFD+M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 171 P-------------------------------ERTPVSWNSVITACVENLWLRDGVEYFL 199
P R VSWNS+++ ++N +E F+
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 200 KMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSG 259
M G E D + ++L C+ L SLG +H VV G +AL+DMY K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 260 ALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGV 319
+ VF+ + ++N ++WSA+I G Q+ AL F+ M + + + + Y V
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYASV 287
Query: 320 LCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG----AMVDIYGRAGLLREA 368
L +C+ + G + + H +K G A +D+Y + +++A
Sbjct: 288 LRSCAALSELRLGGQL-----HAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 48/256 (18%)
Query: 173 RTPVSWNSVITACVENLWLR--DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR 230
R+ VS+N +T E + R YF T+ + CA+ G L LG+
Sbjct: 12 RSVVSFNRCLT---EKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGK 68
Query: 231 WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
H +++ G + + L+ +Y S A +VF++M R+V++W+ MI G ++
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 291 FAEEALSLFEMMS---------------ENHDNIRPNYV--------------TYLGVLC 321
+A S F MM +N ++++ V T+ +L
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 322 ACSHAGMVDEGYRYFREMEYVHGI------KPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
CS G + +HGI +V A++D+Y + E+ Q +
Sbjct: 189 VCSFLEDTSLGMQ-------IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 376 PVNPDPIVWRTLLSAC 391
P + + W +++ C
Sbjct: 242 P-EKNSVSWSAIIAGC 256
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 260/503 (51%), Gaps = 39/503 (7%)
Query: 19 CRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWN 78
C ++ +L QI A G +T S ++ C SPS ++ +A + +P WN
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWN 93
Query: 79 ILIRGFATSDSPIEAIWVFRKM--RERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
+IRGF+ S P AI +F M VKP +LT+P + K R+G+Q+H +
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 137 KFGLDSDVYVGNNLINFY-------------------------------GRCKKILDARK 165
K GL+ D ++ N +++ Y +C I A+
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 213
Query: 166 VFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGY 225
+FDEMP+R VSWNS+I+ V N +D ++ F +M+ +PD +MV +L+ACA LG
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGA 273
Query: 226 LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILG 285
GRW+H +V L+ + TAL+DMY K G + VFE K+ + W++MILG
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI 345
LA +GF E A+ LF + + + P+ V+++GVL AC+H+G V +FR M+ + I
Sbjct: 334 LANNGFEERAMDLFSELERS--GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDK 405
+P + HY MV++ G AGLL EA I++MPV D ++W +LLSAC + +
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR---KIGNVEMAKR 448
Query: 406 VRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMI 465
K L ++P V+++N YA G++E A R +M++ M+K G S +++ +
Sbjct: 449 AAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVH 508
Query: 466 RFFAGYDSRPDLIPVYHLLDGLN 488
F + + P +Y LLD LN
Sbjct: 509 EFISCGGTHPKSAEIYSLLDILN 531
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 251/471 (53%), Gaps = 44/471 (9%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ +AR + + ++WN +I + EA +F +M++ V P+++ ++
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 119 CAVGSALREGKQVHADAVKFGLDSDV---------------------------------- 144
C +R + ++ +F +++DV
Sbjct: 222 CGRTGNMRYNRAIY----EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 145 -YVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
+V +++ Y +C ++ DA+ +FD+ ++ V W ++I+A VE+ + ++ + F +M
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
SG +PD SM ++SACA LG L +WVH + + G+ + AL++MY K G L
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 397
Query: 264 ARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
R VFE+M +RNV++WS+MI L+ HG A +ALSLF M + +N+ PN VT++GVL C
Sbjct: 398 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ--ENVEPNEVTFVGVLYGC 455
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIV 383
SH+G+V+EG + F M + I P + HYG MVD++GRA LLREA E I+SMPV + ++
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI 515
Query: 384 WRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRV 443
W +L+SAC +H + +G K +L +EP G LV+++N+YA WE N+RRV
Sbjct: 516 WGSLMSACRIHGELE---LGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 444 MRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
M + + K G S +D G F G +Y LD + LK+A
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA 623
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 229/474 (48%), Gaps = 50/474 (10%)
Query: 10 NQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS 69
N L L+ C+S++ + Q+ A HI N L S L + S S NL++A L + S
Sbjct: 13 NTILEKLSFCKSLNHIKQLHA--HILRTVINHKLNSFLFNLSVSSSSINLSYA--LNVFS 68
Query: 70 ATPSP---ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
+ PSP I +N +R + S P I ++++R G + ++ +F +LK + SAL
Sbjct: 69 SIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 128
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
EG ++H A K D +V ++ Y C +I AR VFDEM R V+WN++I
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ + + F +M+ S PDE + ++SAC G + R ++ ++ + +
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 247 LGTALVDMYGKSGALGYAR-------------------------------LVFERMEKRN 275
L TALV MY +G + AR ++F++ EK++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
++ W+ MI + + +EAL +FE M I+P+ V+ V+ AC++ G++D+ ++
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMC--CSGIKPDVVSMFSVISACANLGILDKA-KW 365
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH- 394
+V+G++ + A++++Y + G L + + MP + + W ++++A S+H
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHG 424
Query: 395 DAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLY--AEAGMWERAANVRRVMRD 446
+A D + ++++E VEP + V LY + +G+ E + M D
Sbjct: 425 EASDALSLFARMKQE--NVEP---NEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 257/463 (55%), Gaps = 14/463 (3%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSP 74
L++L R++ + ++A F + NT L ++ C +L A+ + + S
Sbjct: 311 LISLGRAVHSI-GVKACFSREDRFCNTLL--DMYSKCG-----DLDSAKAVFREMSDRSV 362
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+S+ +I G+A EA+ +F +M E G+ P+ T +L CCA L EGK+VH
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ L D++V N L++ Y +C + +A VF EM + +SWN++I +N + +
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 195 VEYF-LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+ F L + F PDE ++ +L ACA L GR +H ++ G + +LVD
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY K GAL A ++F+ + +++++W+ MI G HGF +EA++LF M + I +
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA--GIEADE 600
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
++++ +L ACSH+G+VDEG+R+F M + I+P + HY +VD+ R G L +AY FI+
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
Query: 374 SMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
+MP+ PD +W LL C +H HD + +KV +++ +EP G V++AN+YAEA
Sbjct: 661 NMPIPPDATIWGALLCGCRIH--HD-VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 717
Query: 434 WERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
WE+ +R+ + G++K G S +++ G + F AG S P+
Sbjct: 718 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 194/385 (50%), Gaps = 15/385 (3%)
Query: 14 SLLNLC---RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
S+L LC +S+ ++ +G ++ L S+L + + +L A ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVFDEVK 156
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ WNIL+ A S +I +F+KM GV+ + TF + K + ++ G+Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H +K G VGN+L+ FY + +++ ARKVFDEM ER +SWNS+I V N
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
G+ F++M SG E D ++V + + CA+ +SLGR VH V +
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+DMY K G L A+ VF M R+V+++++MI G A+ G A EA+ LFE M E + I
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE--EGIS 394
Query: 311 PNYVTYLGVLCACSHAGMVDEGYR---YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
P+ T VL C+ ++DEG R + +E + I A++D+Y + G ++E
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI----FVSNALMDMYAKCGSMQE 450
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACS 392
A M V D I W T++ S
Sbjct: 451 AELVFSEMRV-KDIISWNTIIGGYS 474
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 165/346 (47%), Gaps = 15/346 (4%)
Query: 55 PSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPF 114
++ + ARK+ ISWN +I G+ ++ + + VF +M G++ + T
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
+ CA + G+ VH+ VK + N L++ Y +C + A+ VF EM +R+
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
VS+ S+I + V+ F +M G PD ++ +L+ CA L G+ VH
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ + + AL+DMY K G++ A LVF M +++++W+ +I G +++ +A E
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG- 353
ALSLF ++ E P+ T VL AC+ D+G RE +HG ++
Sbjct: 482 ALSLFNLLLE-EKRFSPDERTVACVLPACASLSAFDKG----RE---IHGYIMRNGYFSD 533
Query: 354 -----AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
++VD+Y + G L A+ + + D + W +++ +H
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMH 578
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 157/377 (41%), Gaps = 55/377 (14%)
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM 170
T +L+ CA +L++GK+V G D +G+ L Y C + +A +VFDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 171 PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR 230
+ WN ++ ++ + F KM SG E D + + + + L + G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 231 WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
+H ++ G +G +LV Y K+ + AR VF+ M +R+V++W+++I G +G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC--------------------------- 323
AE+ LS+F M + I + T + V C
Sbjct: 276 LAEKGLSVFVQMLVS--GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 324 --------SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
S G +D FREM +V Y +M+ Y R GL EA + + M
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMS-----DRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 376 P---VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVAN----LY 428
++PD +L+ C+ + D G +V + ++ G + V+N +Y
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDE---GKRVHE---WIKENDLGFDIFVSNALMDMY 442
Query: 429 AEAGMWERAANVRRVMR 445
A+ G + A V MR
Sbjct: 443 AKCGSMQEAELVFSEMR 459
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 240/448 (53%), Gaps = 11/448 (2%)
Query: 52 SLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP-NKL 110
SL P +++ ++ ++ P+ N +IR F+ S +P E +FR +R P N L
Sbjct: 56 SLIP-RDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPL 114
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM 170
+ F LKCC L G Q+H G SD + L++ Y C+ DA KVFDE+
Sbjct: 115 SSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEI 174
Query: 171 PERTPVSWNSVITACVENLWLRDGVEYFLKMRGS---GFEPDETSMVLMLSACAELGYLS 227
P+R VSWN + + + N RD + F KM+ +PD + +L L ACA LG L
Sbjct: 175 PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALD 234
Query: 228 LGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLA 287
G+ VH + G+ + L LV MY + G++ A VF M +RNV++W+A+I GLA
Sbjct: 235 FGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH-GIK 346
+GF +EA+ F M + I P T G+L ACSH+G+V EG +F M IK
Sbjct: 295 MNGFGKEAIEAFNEMLKF--GISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 347 PLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKV 406
P + HYG +VD+ GRA LL +AY I+SM + PD +WRTLL AC VH + +G++V
Sbjct: 353 PNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE---LGERV 409
Query: 407 RKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIR 466
L+ ++ G+ V++ N Y+ G WE+ +R +M++ + G S ++L G++
Sbjct: 410 ISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHE 469
Query: 467 FFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
F S P +Y +L +N LK+A
Sbjct: 470 FIVDDVSHPRKEEIYKMLAEINQQLKIA 497
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 10/272 (3%)
Query: 32 FHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSATPSPISWNILIRGFATS 87
IHG + LS+ + + +L S +N T A K+ +SWN+L + +
Sbjct: 133 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN 192
Query: 88 DSPIEAIWVFRKMR---ERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDV 144
+ + +F KM+ + VKP+ +T L+ CA AL GKQVH + GL +
Sbjct: 193 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL 252
Query: 145 YVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGS 204
+ N L++ Y RC + A +VF M ER VSW ++I+ N + ++ +E F +M
Sbjct: 253 NLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF 312
Query: 205 GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG--TALVDMYGKSGALG 262
G P+E ++ +LSAC+ G ++ G ++ + L +VD+ G++ L
Sbjct: 313 GISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLD 372
Query: 263 YARLVFERME-KRNVLTWSAMILGLAQHGFAE 293
A + + ME K + W ++ HG E
Sbjct: 373 KAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 268/489 (54%), Gaps = 40/489 (8%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSP 74
L + C+S+ +L++I G +S+ + +LS S ++ +A K + + P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
WN +IRGF+ S +P ++I V+ +M G+ P+ +T+PFL+K + S + G +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA---------- 184
VK GL+ D+++ N LI+ YG + ARK+FDEMP + V+WNS++ A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 185 --CVENLWLRDGVEY------FLK--------------MRGSGFEPDETSMVLMLSACAE 222
+ + RD V + ++K MR + +E +MV ++ ACA
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER--MEKRNVLTWS 280
LG L+ G+ VH ++ + L+ L T+L+DMY K G++G A VF R +++ + L W+
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
A+I GLA HGF E+L LF M E+ I P+ +T+L +L ACSH G+V E + +F+ ++
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRES--KIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
G +P HY MVD+ RAGL+++A++FI MP+ P + LL+ C H
Sbjct: 372 E-SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCI---NHGNL 427
Query: 401 GIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
+ + V K+L+ ++P G V +AN+YA + A ++R M G+KK+AG S +DL
Sbjct: 428 ELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDL 487
Query: 461 GGSMIRFFA 469
G+ RF A
Sbjct: 488 DGTRHRFIA 496
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 248/465 (53%), Gaps = 10/465 (2%)
Query: 14 SLLNLCRSIDQLH---QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
S+L C + L QI +Q N Y+ S L+ + + L A +++ A
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM--YAKLGKLDTAWDILIRFA 552
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+SW +I G+ + +A+ FR+M +RG++ +++ + CA AL+EG+Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+HA A G SD+ N L+ Y RC KI ++ F++ ++WN++++ ++
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ + F++M G + + + + A +E + G+ VH + G ++ A
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+ MY K G++ A F + +N ++W+A+I ++HGF EAL F+ M H N+R
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI--HSNVR 790
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
PN+VT +GVL ACSH G+VD+G YF M +G+ P HY +VD+ RAGLL A E
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAE 430
FIQ MP+ PD +VWRTLLSAC VH + IG+ LL +EP V+++NLYA
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNME---IGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 431 AGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
+ W+ R+ M++ G+KK G+S +++ S+ F+ G + P
Sbjct: 908 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 952
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 154/338 (45%), Gaps = 6/338 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ A L + + + WN+++ + D + +FR+M+ + PN+ T+P +LK
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C L G+Q+H+ +K + YV + LI+ Y + K+ A + + VS
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W ++I + + + F +M G DE + +SACA L L G+ +H Q
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ G ALV +Y + G + + L FE+ E + + W+A++ G Q G EEAL
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
+F M N + I N T+ + A S + +G + + G A++
Sbjct: 679 VFVRM--NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALIS 735
Query: 358 IYGRAGLLREA-YEFIQSMPVNPDPIVWRTLLSACSVH 394
+Y + G + +A +F++ N + W +++A S H
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKN--EVSWNAIINAYSKH 771
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 177/396 (44%), Gaps = 10/396 (2%)
Query: 8 NKNQCLSLLNLCR----SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHAR 63
N+ +L CR + D + QI A+ G +T + + L+ + S + +L AR
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--AR 242
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
++ SW +I G + ++ EAI +F M G+ P F +L C
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
+L G+Q+H +K G SD YV N L++ Y ++ A +F M +R V++N++I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
+ + +E F +M G EPD ++ ++ AC+ G L G+ +H G
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+ ++ AL+++Y K + A F E NV+ W+ M++ + +F M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM- 481
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
+ I PN TY +L C G ++ G + ++ + V ++D+Y + G
Sbjct: 482 -QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV-CSVLIDMYAKLG 539
Query: 364 LLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
L A++ + D + W T+++ + ++ D+
Sbjct: 540 KLDTAWDILIRF-AGKDVVSWTTMIAGYTQYNFDDK 574
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 171/377 (45%), Gaps = 37/377 (9%)
Query: 46 ELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMR---- 101
E +++ S+S S H L + T P FA I F++ R
Sbjct: 16 EPMFLRSVSSSFIFIHGVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSV 75
Query: 102 -ERGVKPNKLTFPFLLK-CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK 159
RG++PN T +LL+ C +L EG+++H+ +K GLDS+ + L +FY
Sbjct: 76 ENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD 135
Query: 160 ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
+ A KVFDEMPERT +WN +I + + F++M P+E + +L A
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 220 C--AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVL 277
C + + + +H +++ +G+ S + L+D+Y ++G + AR VF+ + ++
Sbjct: 196 CRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 278 TWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFR 337
+W AMI GL+++ EA+ LF M I P + VL AC ++ G
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVL--GIMPTPYAFSSVLSACKKIESLEIG----- 307
Query: 338 EMEYVHGIKPLMVHYG---------AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
E +HG L++ G A+V +Y G L A +M D + + TL+
Sbjct: 308 --EQLHG---LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLI 361
Query: 389 SACSVHDAHDRTGIGDK 405
+ S + G G+K
Sbjct: 362 NGLS------QCGYGEK 372
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 242/429 (56%), Gaps = 13/429 (3%)
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
+ARKL +SWN +I G++ + +A+ +FRKM E G +P++ T +L C+
Sbjct: 185 YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACS 244
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
LR G+ + A+ + ++G+ LI+ YG+C + AR+VF++M ++ V+W +
Sbjct: 245 HLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTA 304
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+IT +N + + F +M +G PD ++ +LSAC +G L LG+ +
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
+ + + T LVDMYGK G + A VFE M +N TW+AMI A G A+EAL LF+
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
MS + P+ +T++GVL AC HAG+V +G RYF EM + G+ P + HY ++D+
Sbjct: 425 RMS-----VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL-LVEPRRGG 419
RAG+L EA+EF++ P PD I+ +L AC H D I +K + L+ + E + G
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGAC--HKRKD-VAIREKAMRMLMEMKEAKNAG 536
Query: 420 NLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYD----SRP 475
N VI +N+ A+ MW+ +A +R +MRD G+ K G S +++ G ++ F AG D R
Sbjct: 537 NYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGRE 596
Query: 476 DLIPVYHLL 484
D ++ LL
Sbjct: 597 DSGSLFDLL 605
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 217/394 (55%), Gaps = 18/394 (4%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
L LL C S++QL QIQAQ +H +L+ + V + + S L + P
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSV------TEEP 94
Query: 73 SPISWNILIRGFATSDSPIEA-IWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
+ S+N +IRG + + EA + ++R+M+ G+KP+K T+ F+ CA + G+ V
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H+ K GL+ DV++ ++LI Y +C ++ ARK+FDE+ ER VSWNS+I+ E +
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+D ++ F KM GFEPDE ++V ML AC+ LG L GR + + + + LS LG+ L
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+ MYGK G L AR VF +M K++ + W+AMI +Q+G + EA LF M + + P
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT--GVSP 332
Query: 312 NYVTYLGVLCACSHAGMVDEGYR---YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+ T VL AC G ++ G + + E+ H I V G +VD+YG+ G + EA
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNI---YVATG-LVDMYGKCGRVEEA 388
Query: 369 YEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGI 402
++MPV + W +++A + H H + +
Sbjct: 389 LRVFEAMPVKNEA-TWNAMITAYA-HQGHAKEAL 420
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 12/287 (4%)
Query: 40 NTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRK 99
+T+L S+L+ + +L AR++ ++W +I ++ + EA +F +
Sbjct: 267 STFLGSKLISM--YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 100 MRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK 159
M + GV P+ T +L C AL GKQ+ A + L ++YV L++ YG+C +
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 160 ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
+ +A +VF+ MP + +WN++ITA ++ + F +M P + + + +LSA
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA 441
Query: 220 CAELGYLSLG-RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLT 278
C G + G R+ H + G+V + T ++D+ ++G L A ER +
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 279 WSAMILGLAQH----GFAEEALSLFEMMSENHDNIRPNYVTYLGVLC 321
A ILG E+A+ + M E + NYV VL
Sbjct: 502 MLAAILGACHKRKDVAIREKAMRMLMEMKEAKNA--GNYVISSNVLA 546
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 231/414 (55%), Gaps = 5/414 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW +I+G A + EAI FR+M+ +G+K ++ F +L C A+ EGKQ+HA
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
++ +YVG+ LI+ Y +CK + A+ VFD M ++ VSW +++ + +
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
V+ FL M+ SG +PD ++ +SACA + L G H + + G++ + +LV +
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
YGK G + + +F M R+ ++W+AM+ AQ G A E + LF+ M ++ ++P+ V
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH--GLKPDGV 473
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T GV+ ACS AG+V++G RYF+ M +GI P + HY M+D++ R+G L EA FI
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
MP PD I W TLLSAC IG + L+ ++P +++++YA G W
Sbjct: 534 MPFPPDAIGWTTLLSACR---NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKW 590
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLN 488
+ A +RR MR+ +KK G+S + G + F A +S P L +Y L+ LN
Sbjct: 591 DSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELN 644
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 60/457 (13%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++WN+LI G++ S A+ + M R+ ++T +LK + + GKQ+H
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHG 163
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT------------------- 174
+K G +S + VG+ L+ Y I DA+KVF + +R
Sbjct: 164 QVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIED 223
Query: 175 -----------PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
VSW ++I +N ++ +E F +M+ G + D+ +L AC L
Sbjct: 224 ALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283
Query: 224 GYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMI 283
G ++ G+ +H ++ +G+AL+DMY K L YA+ VF+RM+++NV++W+AM+
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH 343
+G Q G AEEA+ +F M + I P++ T + AC++ ++EG ++ H
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRS--GIDPDHYTLGQAISACANVSSLEEGSQF-------H 394
Query: 344 G--IKPLMVHY----GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA-CSVHDA 396
G I ++HY ++V +YG+ G + ++ M V D + W ++SA A
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRA 453
Query: 397 HDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRD--GGMKKMAG 454
+ + DK+ + L + G L V + + AG+ E+ ++M G + +
Sbjct: 454 VETIQLFDKMVQHGLKPD---GVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 455 ESC-VDLGG------SMIRFFAGYDSRPDLIPVYHLL 484
SC +DL +RF G PD I LL
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 11/284 (3%)
Query: 24 QLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRG 83
Q+H + + H + L ++ C K L +A+ + + +SW ++ G
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKC-----KCLHYAKTVFDRMKQKNVVSWTAMVVG 345
Query: 84 FATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSD 143
+ + EA+ +F M+ G+ P+ T + CA S+L EG Q H A+ GL
Sbjct: 346 YGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 144 VYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
V V N+L+ YG+C I D+ ++F+EM R VSW ++++A + + ++ F KM
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 204 SGFEPDETSMVLMLSACAELGYLSLG-RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
G +PD ++ ++SAC+ G + G R+ G+V S + ++D++ +SG L
Sbjct: 466 HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 263 YARLVFERME-KRNVLTWSAMILGLAQHGFAE----EALSLFEM 301
A M + + W+ ++ G E A SL E+
Sbjct: 526 EAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 42/289 (14%)
Query: 117 KCCAVGS--ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
+C +G+ R K +H + ++ + ++ NN+++ Y K AR+VFD +P+
Sbjct: 12 QCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPN 71
Query: 175 PVSWNSVITA------------CVENLWLRDGVEYFLKMRG---SG-------------- 205
SWN+++ A E L RDGV + + + G SG
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 206 -FEPDETSMVL--MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
F + T + L ML + G++SLG+ +H QV+ G +G+ L+ MY G +
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
A+ VF ++ RN + +++++ GL G E+AL LF M ++ V++ ++
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-------VSWAAMIKG 244
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
+ G+ E FREM+ V G+K +G+++ G G + E +
Sbjct: 245 LAQNGLAKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 233/413 (56%), Gaps = 5/413 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+S+N +I G+A S +A+ + R+M +KP+ T +L + + +GK++H
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
++ G+DSDVY+G++L++ Y + +I D+ +VF + R +SWNS++ V+N +
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEA 327
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ F +M + +P + ++ ACA L L LG+ +H V+ G + + +ALVDM
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G + AR +F+RM + ++W+A+I+G A HG EA+SLFE M ++PN V
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ--GVKPNQV 445
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
++ VL ACSH G+VDE + YF M V+G+ + HY A+ D+ GRAG L EAY FI
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
M V P VW TLLS+CSVH + + +KV +++ V+ G V++ N+YA G W
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLE---LAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
+ A +R MR G++K S +++ F +G S P + + L +
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAV 615
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 191/428 (44%), Gaps = 46/428 (10%)
Query: 20 RSIDQLHQIQAQF-HIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWN 78
+S Q Q+ AQF H + + +Y + L + L +P ++W
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTL----KSPPVLAWK 74
Query: 79 ILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKF 138
+IR F +A+ F +MR G P+ FP +LK C + LR G+ VH V+
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 139 GLDSDVYVGNNLINFYGRCKKI---LDARKVFDEMPERTP-------------------- 175
G+D D+Y GN L+N Y + + + VFDEMP+RT
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 176 -------------VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
VS+N++I ++ D + +M + +PD ++ +L +E
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
+ G+ +H V+ +G+ +G++LVDMY KS + + VF R+ R+ ++W+++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV 342
+ G Q+G EAL LF M ++P V + V+ AC+H + G +
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTA--KVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLR 371
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH-DAHDRTG 401
G + A+VD+Y + G ++ A + M V D + W ++ ++H H+
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVS 430
Query: 402 IGDKVRKE 409
+ ++++++
Sbjct: 431 LFEEMKRQ 438
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 19/302 (6%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIH----GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS 69
S++ C + LH + Q H + G N ++ S LV + S N+ ARK+
Sbjct: 348 SVIPACAHLATLH-LGKQLHGYVLRGGFGSNIFIASALVDM--YSKCGNIKAARKIFDRM 404
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+SW +I G A EA+ +F +M+ +GVKPN++ F +L C+ + E
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 130 QVHADAVK-FGLDSDVYVGNNLINFYGRCKKILDARKVFDEM-PERTPVSWNSVITACVE 187
K +GL+ ++ + + GR K+ +A +M E T W++++++C
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS- 523
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW---VHCQVVLRGMVLS 244
+ +E K+ F D +M + C Y S GRW ++ +R L
Sbjct: 524 ---VHKNLELAEKVAEKIFTVDSENMGAYVLMCNM--YASNGRWKEMAKLRLRMRKKGLR 578
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+ + ++M K+ M+K N A++ + + G+ + + + E
Sbjct: 579 KKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF-LKAVMEQMEKEGYVADTSGVLHDVDE 637
Query: 305 NH 306
H
Sbjct: 638 EH 639
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 228/401 (56%), Gaps = 6/401 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW ++ +A + P+EA+ +F +MR+ VKP+ + +L L++G+ +HA
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
VK GL+ + + +L Y +C ++ A+ +FD+M + WN++I+ +N + R+
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
++ F +M PD S+ +SACA++G L R ++ V + +AL+DM
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
+ K G++ ARLVF+R R+V+ WSAMI+G HG A EA+SL+ M + PN V
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG--GVHPNDV 425
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T+LG+L AC+H+GMV EG+ +F M H I P HY ++D+ GRAG L +AYE I+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
MPV P VW LLSAC H +G+ ++L ++P G+ V ++NLYA A +W
Sbjct: 485 MPVQPGVTVWGALLSACK---KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLW 541
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
+R A VR M++ G+ K G S V++ G + F G S P
Sbjct: 542 DRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 211/386 (54%), Gaps = 14/386 (3%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
SL++ QL QI A+ + G + +L+++L++ S ++T AR++ P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 83
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
WN +IRG++ ++ +A+ ++ M+ V P+ TFP LLK C+ S L+ G+ VHA
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD--EMPERTPVSWNSVITACVENLWL 191
+ G D+DV+V N LI Y +C+++ AR VF+ +PERT VSW ++++A +N
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+ +E F +MR +PD ++V +L+A L L GR +H VV G+ + L +L
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
MY K G + A+++F++M+ N++ W+AMI G A++G+A EA+ +F M ++RP
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK--DVRP 321
Query: 312 NYVTYLGVLCACSHAGMVDEG---YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+ ++ + AC+ G +++ Y Y +Y + + A++D++ + G + E
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDY----RDDVFISSALIDMFAKCGSV-EG 376
Query: 369 YEFIQSMPVNPDPIVWRTLLSACSVH 394
+ ++ D +VW ++ +H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLH 402
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 265/491 (53%), Gaps = 22/491 (4%)
Query: 12 CLSLLNLCRSIDQLHQIQAQFHIHGHY------HNTYLLSELVYVCSLSPSKNLTHARKL 65
C S+L C S LH + +H + +++Y+ + L+ + + LT ARK+
Sbjct: 353 CSSILTSCAS---LHALGFGTQVHAYTIKANLGNDSYVTNSLIDM--YAKCDCLTDARKV 407
Query: 66 VLHSATPSPISWNILIRGFA---TSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
A + +N +I G++ T EA+ +FR MR R ++P+ LTF LL+ A
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI 182
++L KQ+H K+GL+ D++ G+ LI+ Y C + D+R VFDEM + V WNS+
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
V+ + + FL+++ S PDE + M++A L + LG+ HCQ++ RG+
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE-M 301
+ + AL+DMY K G+ A F+ R+V+ W+++I A HG ++AL + E M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
MSE I PNY+T++GVL ACSHAG+V++G + F E+ GI+P HY MV + GR
Sbjct: 648 MSE---GIEPNYITFVGVLSACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGR 703
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
AG L +A E I+ MP P IVWR+LLS C+ + + + +L +P+ G+
Sbjct: 704 AGRLNKARELIEKMPTKPAAIVWRSLLSGCA---KAGNVELAEHAAEMAILSDPKDSGSF 760
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY 481
+++N+YA GMW A VR M+ G+ K G S + + + F + S +Y
Sbjct: 761 TMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIY 820
Query: 482 HLLDGLNLHLK 492
+LD L + ++
Sbjct: 821 EVLDDLLVQIR 831
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 168/345 (48%), Gaps = 25/345 (7%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N+ +AR + S ++W +I G ++ +F ++ E V P+ +L
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C++ L GKQ+HA +++GL+ D + N LI+ Y +C +++ A K+F+ MP + +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W ++++ +N ++ +E F M G +PD + +L++CA L L G VH +
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFA---EE 294
+ + +L+DMY K L AR VF+ +V+ ++AMI G ++ G E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG- 353
AL++F M IRP+ +T++ +L A A + G + +HG LM YG
Sbjct: 438 ALNIFRDM--RFRLIRPSLLTFVSLLRA--SASLTSLGLS-----KQIHG---LMFKYGL 485
Query: 354 --------AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
A++D+Y L+++ M V D ++W ++ +
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 25/298 (8%)
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
F LL+ A L VH + +GL+ D Y+ N LIN Y R ++ ARKVF++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGR 230
ER VSW+++++AC + + + FL+ R P+E + + AC+ G GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 231 WVHCQ----VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGL 286
W+ Q +V G +GT L+D Y K G + YARLVF+ + +++ +TW+ MI G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 287 AQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG-------YRYFREM 339
+ G + +L LF + E DN+ P+ VL ACS ++ G RY EM
Sbjct: 225 VKMGRSYVSLQLFYQLME--DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 340 EYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAH 397
+ LM ++D Y + G + A++ MP N + I W TLLS + H
Sbjct: 283 D-----ASLM---NVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNALH 331
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 266/494 (53%), Gaps = 12/494 (2%)
Query: 3 TRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSEL----VYVCSLSPSKN 58
+ SN+N +L LC + + +A HG L ++ V + + S
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKA---CHGKIIRIDLEGDVTLLNVLINAYSKCGF 111
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ AR++ S +SWN +I + + EA+ +F +MR G K ++ T +L
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
C V E K++H +VK +D ++YVG L++ Y +C I DA +VF+ M +++ V+W
Sbjct: 172 CGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
+S++ V+N + + + + + E ++ ++ ++ AC+ L L G+ +H +
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
G + + ++ VDMY K G+L + ++F ++++N+ W+ +I G A+H +E + L
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
FE M + D + PN VT+ +L C H G+V+EG R+F+ M +G+ P +VHY MVDI
Sbjct: 352 FEKMQQ--DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI 409
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRG 418
GRAGLL EAYE I+S+P +P +W +LL++C V+ + + + ++L +EP
Sbjct: 410 LGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE---LAEVAAEKLFELEPENA 466
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLI 478
GN V+++N+YA WE A R+++RD +KK+ G+S +D+ + F G P +
Sbjct: 467 GNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIR 526
Query: 479 PVYHLLDGLNLHLK 492
+ LD L + +
Sbjct: 527 EICSTLDNLVIKFR 540
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 259/472 (54%), Gaps = 9/472 (1%)
Query: 7 SNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
+N + ++ + C SI+ + + Y + ++ +LV C L ++ A KL
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLV-GCYLRLGHDVC-AEKLF 89
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKM--RERGVKPNKLTFPFLLKCCAVGSA 124
+SWN LI G++ + V +M E G +PN++TF ++ C G +
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
EG+ +H +KFG+ +V V N IN+YG+ + + K+F+++ + VSWN++I
Sbjct: 150 KEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
++N G+ YF R G EPD+ + + +L +C ++G + L + +H ++ G +
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+ TAL+D+Y K G L + VF + + + W+AM+ A HGF +A+ FE+M
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMV- 328
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
H I P++VT+ +L ACSH+G+V+EG YF M + I P + HY MVD+ GR+GL
Sbjct: 329 -HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 387
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIV 424
L++AY I+ MP+ P VW LL AC V+ T +G K + L +EPR G N V++
Sbjct: 388 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKD---TQLGTKAAERLFELEPRDGRNYVML 444
Query: 425 ANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
+N+Y+ +G+W+ A+ +R +M+ G+ + +G S ++ G + +F G S P+
Sbjct: 445 SNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPE 496
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 217/393 (55%), Gaps = 12/393 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
++W LI GF ++ +AI FR+M+ GVK N+ LL C + GK H
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF 233
Query: 135 AVKFGLDS--------DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
G D +V + +LI+ Y +C + AR +FD MPERT VSWNS+IT
Sbjct: 234 LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS 293
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+N + + FL M G PD+ + + ++ A G LG+ +H V G V
Sbjct: 294 QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA 353
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
+ ALV+MY K+G A+ FE +EK++ + W+ +I+GLA HG EALS+F+ M E
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK- 412
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
N P+ +TYLGVL ACSH G+V+EG RYF EM +HG++P + HYG MVDI RAG
Sbjct: 413 GNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFE 472
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVAN 426
EA +++MPV P+ +W LL+ C +H+ + T D++R + E G V+++N
Sbjct: 473 EAERLVKTMPVKPNVNIWGALLNGCDIHENLELT---DRIRSMVAEPEELGSGIYVLLSN 529
Query: 427 LYAEAGMWERAANVRRVMRDGGMKKMAGESCVD 459
+YA+AG W +R M+ + K+ G S V+
Sbjct: 530 IYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 203/393 (51%), Gaps = 17/393 (4%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSP-SKNLTHARKLVLHSAT 71
LS L CRS+ +L+Q+ N LS L+ C+ P + NL++AR +
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS WN +IRG++ S +P +A+ +++M +G P+ TFP++LK C+ ++ G V
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H VK G + ++YV L++ Y C ++ +VF+++P+ V+W S+I+ V N
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM---------- 241
D +E F +M+ +G + +ET MV +L AC + G+W H L+G+
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG--FLQGLGFDPYFQSKV 247
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ L T+L+DMY K G L AR +F+ M +R +++W+++I G +Q+G AEEAL +F
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLD 307
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
M + I P+ VT+L V+ A G G + +K + A+V++Y +
Sbjct: 308 MLDL--GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI-VCALVNMYAK 364
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
G A + + + D I W ++ + H
Sbjct: 365 TGDAESAKKAFEDLE-KKDTIAWTVVIIGLASH 396
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 262/512 (51%), Gaps = 53/512 (10%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----------- 53
+L K+ L+LL C S L I HG T+L+S++ L
Sbjct: 8 TLRFKHPKLALLQSCSSFSDLKII------HGFLLRTHLISDVFVASRLLALCVDDSTFN 61
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
P+ L +A + P+ +N+LIR F+T P +A + +M + + P+ +TFP
Sbjct: 62 KPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFP 121
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG------------------ 155
FL+K + + G+Q H+ V+FG +DVYV N+L++ Y
Sbjct: 122 FLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR 181
Query: 156 -------------RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMR 202
+C + +AR++FDEMP R +W+ +I +N ++ F M+
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 203 GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
G +ET MV ++S+CA LG L G + VV M ++ LGTALVDM+ + G +
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIE 301
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
A VFE + + + L+WS++I GLA HG A +A+ F M P VT+ VL A
Sbjct: 302 KAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL--GFIPRDVTFTAVLSA 359
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPI 382
CSH G+V++G + M+ HGI+P + HYG +VD+ GRAG L EA FI M V P+
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 383 VWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRR 442
+ LL AC + + T + ++V L+ V+P G V+++N+YA AG W++ ++R
Sbjct: 420 ILGALLGACKI---YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRD 476
Query: 443 VMRDGGMKKMAGESCVDLGGSMIRFFAGYDSR 474
+M++ +KK G S +++ G + +F G D +
Sbjct: 477 MMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK 508
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 248/479 (51%), Gaps = 59/479 (12%)
Query: 61 HARKLVLHSATPSPISWNILIRGFA---TSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
H R L L S WNI+IR +S I V+ +MR V P+ TFPFLL
Sbjct: 16 HIRHLKLES-----FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLP 70
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK------------------ 159
L G++ HA + FGLD D +V +L+N Y C
Sbjct: 71 SFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPA 130
Query: 160 -------------ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMR---- 202
I DARK+FDEMPER +SW+ +I V ++ ++ F +M+
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 203 -GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ P+E +M +LSAC LG L G+WVH + + + LGTAL+DMY K G+L
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 262 GYARLVFERM-EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
A+ VF + K++V +SAMI LA +G +E LF M+ + DNI PN VT++G+L
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTS-DNINPNSVTFVGIL 309
Query: 321 CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPD 380
AC H G+++EG YF+ M GI P + HYG MVD+YGR+GL++EA FI SMP+ PD
Sbjct: 310 GACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
Query: 381 PIVWRTLLSACSVHDAHDRTGIGD-----KVRKELLLVEPRRGGNLVIVANLYAEAGMWE 435
++W +LLS + +GD K L+ ++P G V+++N+YA+ G W
Sbjct: 370 VLIWGSLLSGSRM--------LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
Query: 436 RAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
+R M G+ K+ G S V++ G + F G +S+ + +Y +LD + L+ A
Sbjct: 422 EVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREA 480
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
SLLN+ S L Q F G + L + V + + + + ARKL +
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSG---SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERN 158
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMR-----ERGVKPNKLTFPFLLKCCAVGSALREG 128
ISW+ LI G+ EA+ +FR+M+ E V+PN+ T +L C AL +G
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN 188
K VHA K+ ++ D+ +G LI+ Y +C + A++VF+ + + V S + C+
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 189 LWLRDG-VEYFLKMRGS-GFEPDETSMVLMLSACAELGYLSLGR-WVHCQVVLRGMVLSC 245
L D + F +M S P+ + V +L AC G ++ G+ + + G+ S
Sbjct: 279 YGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSI 338
Query: 246 QLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILG 285
Q +VD+YG+SG + A M + +VL W +++ G
Sbjct: 339 QHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 248/438 (56%), Gaps = 7/438 (1%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ +A+KL +SWN +I G+A + + EA+ +F+ M + V+P++ T ++
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA ++ G+QVH G S++ + N LI+ Y +C ++ A +F+ +P + +SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV-- 236
N++I ++ + F +M SG P++ +M+ +L ACA LG + +GRW+H +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
L+G+ + L T+L+DMY K G + A VF + +++ +W+AMI G A HG A+ +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
LF M + I+P+ +T++G+L ACSH+GM+D G FR M + + P + HYG M+
Sbjct: 456 DLFSRMRK--IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
D+ G +GL +EA E I M + PD ++W +LL AC + H +G+ + L+ +EP
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM---HGNVELGESFAENLIKIEPE 570
Query: 417 RGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
G+ V+++N+YA AG W A R ++ D GMKK+ G S +++ + F G P
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Query: 477 LIPVYHLLDGLNLHLKMA 494
+Y +L+ + + L+ A
Sbjct: 631 NREIYGMLEEMEVLLEKA 648
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 224/447 (50%), Gaps = 69/447 (15%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPS-KNLTHARKLVLHSAT 71
LSLL+ C+++ L I AQ G ++ Y LS+L+ C LSP + L +A +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ + WN + RG A S P+ A+ ++ M G+ PN TFPF+LK CA A +EG+Q+
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 132 HADAVKFGLDSDVYVGNNLINFY---GRCK---KILD----------------------- 162
H +K G D D+YV +LI+ Y GR + K+ D
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 163 --ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSAC 220
A+K+FDE+P + VSWN++I+ E ++ +E F M + PDE++MV ++SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 221 AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWS 280
A+ G + LGR VH + G + ++ AL+D+Y K G L A +FER+ ++V++W+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG-------- 332
+I G +EAL LF+ M + + PN VT L +L AC+H G +D G
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 333 -------------------YRYFREMEYVHGIKPLMVH-----YGAMV---DIYGRAGLL 365
Y ++E H + ++H + AM+ ++GRA
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACS 392
+ + ++ + + PD I + LLSACS
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACS 481
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 224/378 (59%), Gaps = 5/378 (1%)
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
++ C + R G H A+K G SDVY+G++L+ Y ++ +A KVF+EMPER
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
VSW ++I+ + + ++ + KMR S +P++ + +LSAC G L GR VHCQ
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQ 246
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+ G+ + +L+ MY K G L A +F++ ++V++W++MI G AQHG A +A
Sbjct: 247 TLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQA 306
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
+ LFE+M +P+ +TYLGVL +C HAG+V EG ++F M HG+KP + HY +
Sbjct: 307 IELFELMMPK-SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCL 364
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
VD+ GR GLL+EA E I++MP+ P+ ++W +LL +C VH TGI + +E L++EP
Sbjct: 365 VDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH-GDVWTGI--RAAEERLMLEP 421
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
V +ANLYA G W+ AA VR++M+D G+K G S +++ + F A S
Sbjct: 422 DCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNC 481
Query: 476 DLIPVYHLLDGLNLHLKM 493
++ + H+L L H++
Sbjct: 482 RMLEIVHVLHCLIDHMEF 499
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 4/257 (1%)
Query: 36 GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
G + YL S LV + S + +A K+ + +SW +I GFA +
Sbjct: 150 GFISDVYLGSSLVVL--YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
++ KMR+ PN TF LL C AL +G+ VH + GL S +++ N+LI+ Y
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYF-LKMRGSGFEPDETSMV 214
+C + DA ++FD+ + VSWNS+I ++ +E F L M SG +PD + +
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYL 327
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-K 273
+LS+C G + GR + G+ + LVD+ G+ G L A + E M K
Sbjct: 328 GVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK 387
Query: 274 RNVLTWSAMILGLAQHG 290
N + W +++ HG
Sbjct: 388 PNSVIWGSLLFSCRVHG 404
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+++ +E + L D ++ G+ D + + +C G HC + G
Sbjct: 95 VSSVLEEVMLEDSSS---SVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGF 151
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ LG++LV +Y SG + A VFE M +RNV++W+AMI G AQ + L L+
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
M ++ + PN T+ +L AC+ +G + +G + ++ G+K + +++ +Y +
Sbjct: 212 MRKSTSD--PNDYTFTALLSACTGSGALGQGRSVHCQTLHM-GLKSYLHISNSLISMYCK 268
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
G L++A+ N D + W ++++ + H
Sbjct: 269 CGDLKDAFRIFDQFS-NKDVVSWNSMIAGYAQH 300
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/460 (33%), Positives = 251/460 (54%), Gaps = 38/460 (8%)
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
S + + +SW I + EA F M GV+PN +TF LL C ++ E
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 128 --GKQVHADAVKFGLDSD-VYVG-------------------------------NNLINF 153
G +H A K GLD + V VG N +I+
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 154 YGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSM 213
Y R ++ +A K+FD+MPER +SW ++I V+ + + + +F +M+ SG +PD ++
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 214 VLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK 273
+ L+AC LG LS G WVH V+ + + ++ +L+D+Y + G + +AR VF MEK
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 274 RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
R V++W+++I+G A +G A E+L F M E +P+ VT+ G L ACSH G+V+EG
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEK--GFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSV 393
RYF+ M+ + I P + HYG +VD+Y RAG L +A + +QSMP+ P+ +V +LL+ACS
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 394 HDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMA 453
H + + +++ K L + + N VI++N+YA G WE A+ +RR M+ G+KK
Sbjct: 388 HG--NNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 454 GESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKM 493
G S +++ M F AG ++ + + +L+ ++ L++
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Query: 168 DEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL--GY 225
++ T VSW S I N L + + F M +G EP+ + + +LS C + G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 226 LSLGRWVH---CQVVL-RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
+LG +H C++ L R V+ +GTA++ MY K G ARLVF+ ME +N +TW+
Sbjct: 89 EALGDLLHGYACKLGLDRNHVM---VGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY 341
MI G + G + A +F+ M E + +++ ++ G +E +FREM+
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPER------DLISWTAMINGFVKKGYQEEALLWFREMQ- 198
Query: 342 VHGIKP 347
+ G+KP
Sbjct: 199 ISGVKP 204
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
AR++ + + +SWN +I GFA + + E++ FRKM+E+G KP+ +TF L C+
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 122 GSALREG-KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER-TPVSWN 179
+ EG + + + + L++ Y R ++ DA K+ MP + V
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG 379
Query: 180 SVITAC 185
S++ AC
Sbjct: 380 SLLAAC 385
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 236/442 (53%), Gaps = 40/442 (9%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++WN +I GF + A+ +F KM R+ + P++ T +L CA L GKQ+H+
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARK---------------------------- 165
V G D V N LI+ Y RC + AR+
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 166 -----VFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSAC 220
+F + +R V+W ++I ++ + + F M G G P+ ++ MLS
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 221 AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTW 279
+ L LS G+ +H V G + S + AL+ MY K+G + A F+ + +R+ ++W
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
++MI+ LAQHG AEEAL LFE M + +RP+++TY+GV AC+HAG+V++G +YF M
Sbjct: 484 TSMIIALAQHGHAEEALELFETML--MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 340 EYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
+ V I P + HY MVD++GRAGLL+EA EFI+ MP+ PD + W +LLSAC VH D
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID- 600
Query: 400 TGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVD 459
+G + LLL+EP G +ANLY+ G WE AA +R+ M+DG +KK G S ++
Sbjct: 601 --LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 460 LGGSMIRFFAGYDSRPDLIPVY 481
+ + F + P+ +Y
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIY 680
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 164/385 (42%), Gaps = 68/385 (17%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW +I G+ +AI V M + G++P + T +L A + GK+VH+
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD-------------------------- 168
VK GL +V V N+L+N Y +C + A+ VFD
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 169 -----EMPERTPVSWNSVITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAE 222
+M ER V+WNS+I+ + + ++ F KM R S PD ++ +LSACA
Sbjct: 232 MAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL--------------------- 261
L L +G+ +H +V G +S + AL+ MY + G +
Sbjct: 292 LEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFT 351
Query: 262 ----GYARL--------VFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
GY +L +F ++ R+V+ W+AMI+G QHG EA++LF M
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-- 409
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
RPN T +L S + G + I + V A++ +Y +AG + A
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS-NALITMYAKAGNITSAS 468
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVH 394
+ D + W +++ A + H
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQH 493
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 3/229 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ A+ + + ++W +I G+ S EAI +FR M G +PN T +L
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPV 176
+ ++L GKQ+H AVK G V V N LI Y + I A + FD + ER V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR-WVHCQ 235
SW S+I A ++ + +E F M G PD + V + SAC G ++ GR +
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMI 283
+ ++ + +VD++G++G L A+ E+M + +V+TW +++
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 31/205 (15%)
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA------ 184
VH +K GL VY+ NNL+N Y + L ARK+FDEMP RT SWN+V++A
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 185 ----C--VENLWLRDGVEYFLKMRG-------------------SGFEPDETSMVLMLSA 219
C + L RD V + + G G EP + ++ +L++
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTW 279
A + G+ VH +V G+ + + +L++MY K G A+ VF+RM R++ +W
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 280 SAMILGLAQHGFAEEALSLFEMMSE 304
+AMI Q G + A++ FE M+E
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAE 240
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 259/482 (53%), Gaps = 15/482 (3%)
Query: 19 CRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPS--KNLTHARKLVLHSATPSPIS 76
C ++ Q+ + F IHG + NTY +S+L+ P+ K+ +A + P+
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV 80
Query: 77 WNILIRGFATSDSP---IEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++ +IR + S P + + K E + P+ LTF FL+ C GKQ+H
Sbjct: 81 YDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHC 140
Query: 134 DAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
VK G+ SD +V ++ Y K +LDARKVFDE+P+ V W+ ++ V
Sbjct: 141 WVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGS 200
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTAL 251
+G+E F +M G EPDE S+ L+ACA++G L+ G+W+H V + + S +GTAL
Sbjct: 201 EGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTAL 260
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
VDMY K G + A VF+++ +RNV +W+A+I G A +G+A++A++ E + E D I+P
Sbjct: 261 VDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL-EREDGIKP 319
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
+ V LGVL AC+H G ++EG ME + I P HY +VD+ RAG L +A
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 379
Query: 372 IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP----RRGGNLVIVANL 427
I+ MP+ P VW LL+ C H +G+ K LL +E LV ++N+
Sbjct: 380 IEKMPMKPLASVWGALLNGCR---THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNI 436
Query: 428 YAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
Y A+ VR ++ G++K G S +++ G++ +F +G S P+L+ ++ ++ L
Sbjct: 437 YFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
Query: 488 NL 489
++
Sbjct: 497 SV 498
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 266/511 (52%), Gaps = 41/511 (8%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHY-HNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
L++ +S+D++ QI A H H Y + L + + + H+ L + P
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
+ I + + +A ++ ++ + PN+ TF LLK C+ S GK +H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHT 150
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT------------------- 174
+KFGL D YV L++ Y + ++ A+KVFD MPER+
Sbjct: 151 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 175 ------------PVSWNSVITACVENLWLRDGVEYFLKMRGSGF-EPDETSMVLMLSACA 221
VSWN +I ++ + D + F K+ G +PDE ++V LSAC+
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
++G L GRW+H V + L+ ++ T L+DMY K G+L A LVF +++++ W+A
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY 341
MI G A HG++++AL LF M + ++P +T++G L AC+HAG+V+EG R F M
Sbjct: 331 MIAGYAMHGYSQDALRLFNEM-QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTG 401
+GIKP + HYG +V + GRAG L+ AYE I++M ++ D ++W ++L +C +H
Sbjct: 390 EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF---V 446
Query: 402 IGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLG 461
+G ++ + L+ + + G V+++N+YA G +E A VR +M++ G+ K G S +++
Sbjct: 447 LGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIE 506
Query: 462 GSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
+ F AG +Y +L ++ +K
Sbjct: 507 NKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 229/403 (56%), Gaps = 6/403 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+S+N++I ++ +D ++ FR+M+ G F +L A S+L+ G+Q+H
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
A+ DS ++VGN+L++ Y +C+ +A +F +P+RT VSW ++I+ V+ G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
++ F KMRGS D+++ +L A A L LG+ +H ++ G + + G+ LVDM
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G++ A VFE M RN ++W+A+I A +G E A+ F M E+ ++P+ V
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES--GLQPDSV 554
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
+ LGVL ACSH G V++G YF+ M ++GI P HY M+D+ GR G EA + +
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP-RRGGNLVIVANLYAEAGM 433
MP PD I+W ++L+AC +H + ++ ++L +E R V ++N+YA AG
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQ---SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGE 671
Query: 434 WERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
WE+ +V++ MR+ G+KK+ S V++ + F + + P+
Sbjct: 672 WEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 714
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 7/370 (1%)
Query: 21 SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNIL 80
++ Q+H + G N +L V + S + L A L +++N L
Sbjct: 165 AVGQVHAFAVKL---GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTL 221
Query: 81 IRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGL 140
I G+ E+I +F KMR+ G +P+ TF +LK G+Q+HA +V G
Sbjct: 222 ITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGF 281
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
D VGN +++FY + ++L+ R +FDEMPE VS+N VI++ + + +F +
Sbjct: 282 SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGA 260
M+ GF+ MLS A L L +GR +HCQ +L +G +LVDMY K
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 261 LGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
A L+F+ + +R ++W+A+I G Q G L LF M + N+R + T+ VL
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS--NLRADQSTFATVL 459
Query: 321 CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPD 380
A + + G + + ++ + G +VD+Y + G +++A + + MP + +
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRN 517
Query: 381 PIVWRTLLSA 390
+ W L+SA
Sbjct: 518 AVSWNALISA 527
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 181/409 (44%), Gaps = 21/409 (5%)
Query: 27 QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFAT 86
Q+ A ++ + +S + + +++ AR L + ++W IL+ +A
Sbjct: 63 QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR 122
Query: 87 SDSPIEAIWVFRKM--RERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDV 144
+ EA +FR+M P+ +TF LL C QVHA AVK G D++
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 145 Y--VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMR 202
+ V N L+ Y +++ A +F+E+PE+ V++N++IT ++ + + FLKMR
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 203 GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
SG +P + + +L A L +LG+ +H V G +G ++D Y K +
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVL 302
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLC 321
R++F+ M + + ++++ +I +Q E +L F EM D + T L +
Sbjct: 303 ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA 362
Query: 322 ACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG-AMVDIYGRAGLLREAYEFIQSMPVNPD 380
S M + + + + ++H G ++VD+Y + + EA +S+P
Sbjct: 363 NLSSLQMGRQLH-----CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRT 416
Query: 381 PIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
+ W L+S H G G L L RG NL + +A
Sbjct: 417 TVSWTALISGYVQKGLH---GAG------LKLFTKMRGSNLRADQSTFA 456
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 255/483 (52%), Gaps = 40/483 (8%)
Query: 9 KNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVC-SLSPSKNLTHARKLVL 67
+ + L LL+ + +L +I A H + + LL+ + +C SLS N +A ++
Sbjct: 4 ERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLS---NSDYANRVFS 60
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
H P+ + +N +I+ ++ P+E++ F M+ RG+ ++ T+ LLK C+ S LR
Sbjct: 61 HIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRF 120
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER-------------- 173
GK VH + ++ G + ++ Y ++ DA+KVFDEM ER
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180
Query: 174 -----------------TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLM 216
+ VSWNS+I++ + R+ +E F +M GF+PDE ++V +
Sbjct: 181 SGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240
Query: 217 LSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTALVDMYGKSGALGYARLVFERMEKRN 275
L A LG L G+W+H G+ +G ALVD Y KSG L A +F +M++RN
Sbjct: 241 LPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN 300
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
V++W+ +I G A +G E + LF+ M E + PN T+LGVL CS+ G V+ G
Sbjct: 301 VVSWNTLISGSAVNGKGEFGIDLFDAMIE-EGKVAPNEATFLGVLACCSYTGQVERGEEL 359
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
F M ++ HYGAMVD+ R+G + EA++F+++MPVN + +W +LLSAC
Sbjct: 360 FGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACR--- 416
Query: 396 AHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGE 455
+H + + EL+ +EP GN V+++NLYAE G W+ VR +M+ ++K G+
Sbjct: 417 SHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQ 476
Query: 456 SCV 458
S +
Sbjct: 477 STI 479
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 251/467 (53%), Gaps = 19/467 (4%)
Query: 31 QFHIH----GHYHNTYLLSELVYV---CSLSPSKNLTHARKLVLHSATPSPIS--WNILI 81
Q H H G ++L+ L+ + C L + ARK+ + S +S +N LI
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGL-----VADARKVFEENPQSSQLSVCYNALI 128
Query: 82 RGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLD 141
G+ + +A ++FR+M+E GV + +T L+ C V L G+ +H VK GLD
Sbjct: 129 SGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD 188
Query: 142 SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKM 201
S+V V N+ I Y +C + R++FDEMP + ++WN+VI+ +N D +E + +M
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 202 RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ SG PD ++V +LS+CA LG +G V V G V + + A + MY + G L
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 262 GYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLC 321
AR VF+ M +++++W+AMI HG E L LF+ M + IRP+ ++ VL
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR--GIRPDGAVFVMVLS 366
Query: 322 ACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDP 381
ACSH+G+ D+G FR M+ + ++P HY +VD+ GRAG L EA EFI+SMPV PD
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 382 IVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVR 441
VW LL AC +H D + + +++ EP G V+++N+Y+++ E +R
Sbjct: 427 AVWGALLGACKIHKNVD---MAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 442 RVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLN 488
+MR+ +K G S V+ G + F AG S V+ +LD L
Sbjct: 484 VMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE 530
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 191/379 (50%), Gaps = 10/379 (2%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
A + WN+ +R A E+I ++R M G P+ +FPF+LK CA S G+
Sbjct: 14 AAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQ 73
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS--WNSVITACVE 187
Q+H K G +++ +V LI+ Y +C + DARKVF+E P+ + +S +N++I+
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTA 133
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
N + D F +M+ +G D +M+ ++ C YL LGR +H Q V G+ +
Sbjct: 134 NSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAV 193
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+ + MY K G++ R +F+ M + ++TW+A+I G +Q+G A + L L+E M +
Sbjct: 194 LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS-- 251
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
+ P+ T + VL +C+H G G+ + +E +G P + A + +Y R G L +
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES-NGFVPNVFVSNASISMYARCGNLAK 310
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR-RGGNLVIVAN 426
A MPV + W ++ +H + IG + +++ R G V+V +
Sbjct: 311 ARAVFDIMPVK-SLVSWTAMIGCYGMHGMGE---IGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 427 LYAEAGMWERAANVRRVMR 445
+ +G+ ++ + R M+
Sbjct: 367 ACSHSGLTDKGLELFRAMK 385
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 226/422 (53%), Gaps = 12/422 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN + + ++ +A ++ M KP+ TF L C L +G+ +H+
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 281
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
A+ G D D+ N I+ Y + + AR +FD M RT VSW +I+ E + +
Sbjct: 282 AIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM----VLSCQLGTA 250
+ F M SG +PD +++ ++S C + G L G+W+ + + G V+ C A
Sbjct: 342 LALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN---A 398
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+DMY K G++ AR +F+ ++ V+TW+ MI G A +G EAL LF M + + +
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL--DYK 456
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
PN++T+L VL AC+H+G +++G+ YF M+ V+ I P + HY MVD+ GR G L EA E
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAE 430
I++M PD +W LL+AC + H I ++ + L +EP+ V +AN+YA
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKI---HRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Query: 431 AGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLH 490
AGMW+ A +R +M+ +KK GES + + G F G + +Y L+GL+L
Sbjct: 574 AGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLF 633
Query: 491 LK 492
K
Sbjct: 634 AK 635
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 166/335 (49%), Gaps = 7/335 (2%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ +A K+ +WN ++ GF S +A +FR+MR + P+ +T L++
Sbjct: 102 SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ 161
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP--ERTP 175
+ +L+ + +HA ++ G+D V V N I+ YG+C + A+ VF+ + +RT
Sbjct: 162 SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV 221
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
VSWNS+ A D + M F+PD ++ + + ++C L+ GR +H
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 281
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+ G + + MY KS ARL+F+ M R ++W+ MI G A+ G +EA
Sbjct: 282 AIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY-GA 354
L+LF M ++ + +P+ VT L ++ C G ++ G ++ ++G K V A
Sbjct: 342 LALFHAMIKSGE--KPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNA 398
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
++D+Y + G + EA + + P + W T+++
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIA 432
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R+L S S +WN+ IR + P+E++ +FR+M+ G +PN TFPF+ K CA
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI 182
+ + + VHA +K SDV+VG ++ + +C + A KVF+ MPER +WN+++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
+ ++ F +MR + PD +++ ++ + + L L +H + G+
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEK--RNVLTWSAMILGLAQHGFAEEALSLFE 300
+ + + YGK G L A+LVFE +++ R V++W++M + G A +A L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
+M + +P+ T++ + +C + + +G
Sbjct: 246 LML--REEFKPDLSTFINLAASCQNPETLTQG 275
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 48 VYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
++ S S++ AR L + + +SW ++I G+A EA+ +F M + G KP
Sbjct: 296 TFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKP 355
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSD-VYVGNNLINFYGRCKKILDARKV 166
+ +T L+ C +L GK + A A +G D V + N LI+ Y +C I +AR +
Sbjct: 356 DLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
Query: 167 FDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL 226
FD PE+T V+W ++I N + ++ F KM ++P+ + + +L ACA G L
Sbjct: 416 FDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSL 475
Query: 227 SLGRWVHCQVVLRGMVLSCQLG--TALVDMYGKSGALGYARLVFERME-KRNVLTWSAMI 283
G W + ++ + +S L + +VD+ G+ G L A + M K + W A++
Sbjct: 476 EKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRPNYVT-YLGVLCACSHAGMVDEGYRYFREMEYV 342
H + + E +E+ N+ P Y+ + + AGM D G+ R +
Sbjct: 535 NACKIH----RNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD-GFARIRSIMKQ 589
Query: 343 HGIK 346
IK
Sbjct: 590 RNIK 593
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+WN I V + + F +M+ GFEP+ + + ACA L + VH +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
+ +GTA VDM+ K ++ YA VFERM +R+ TW+AM+ G Q G ++A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH---GIKPLMVHYG 353
SLF M N I P+ VT + ++ + S ++ + M V G+ +
Sbjct: 139 SLFREMRLNE--ITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIV-WRTLLSACSVH-DAHDRTGI 402
+ YG+ G L A +++ +V W ++ A SV +A D G+
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 265/508 (52%), Gaps = 73/508 (14%)
Query: 19 CRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWN 78
C++I L QI A ++G N ++ EL+Y SLS L +A KL P N
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 79 ILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV-----------GSALRE 127
++RG A S P + + ++ +M +RGV P++ TF F+LK C+ G +R
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 128 GKQV-----------HADAVKFGLDSDVY---------VGNNLINFYGRCKKILDARKVF 167
G + HA+ G+ S+++ +++ + Y + KI +A ++F
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 168 DEMPERTPVSWNSVITACV------------ENLWLRDGVEY------------------ 197
DEMP + V+WN +IT C+ + +D V +
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 198 -FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSC-QLGT----AL 251
F +MR +G PD +++ +LSACA LG L G+ +H ++ V S +GT AL
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+DMY K G++ A VF ++ R++ TW+ +I+GLA H AE ++ +FE M + P
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEM--QRLKVWP 378
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
N VT++GV+ ACSH+G VDEG +YF M ++ I+P + HYG MVD+ GRAG L EA+ F
Sbjct: 379 NEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMF 438
Query: 372 IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEA 431
++SM + P+ IVWRTLL AC + + +G ++LL + G+ V+++N+YA
Sbjct: 439 VESMKIEPNAIVWRTLLGACKI---YGNVELGKYANEKLLSMRKDESGDYVLLSNIYAST 495
Query: 432 GMWERAANVRRVMRDGGMKKMAGESCVD 459
G W+ VR++ D +KK G S ++
Sbjct: 496 GQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 253/486 (52%), Gaps = 17/486 (3%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
+++ C S Q+ Q+Q+ F GH+ +++L S L+ C++SP +L+ A ++ + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERG------VKPNKLTFPFLLKCCAVGSALRE 127
WN +IRGFA S P A +R M ++ + + LT F LK CA
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
Q+H + GL +D + L++ Y + ++ A K+FDEMP R SWN++I V
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ +E + +M G E ++V L AC+ LG + G + +++S
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS--- 244
Query: 248 GTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
A +DMY K G + A VFE+ K++V+TW+ MI G A HG A AL +F+ + +N
Sbjct: 245 -NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN- 302
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
I+P+ V+YL L AC HAG+V+ G F M G++ M HYG +VD+ RAG LR
Sbjct: 303 -GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVAN 426
EA++ I SM + PDP++W++LL A ++ + I + KE+ + G+ V+++N
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGV---NNDGDFVLLSN 417
Query: 427 LYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDG 486
+YA G W+ VR M +KK+ G S ++ G++ F+ S +Y +D
Sbjct: 418 VYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDE 477
Query: 487 LNLHLK 492
+ ++
Sbjct: 478 IRFKIR 483
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 257/482 (53%), Gaps = 15/482 (3%)
Query: 19 CRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPS--KNLTHARKLVLHSATPSPIS 76
C ++ Q+ + F IHG + NTY +S+L+ P+ K+ +A + P+
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV 80
Query: 77 WNILIRGFATSDSP---IEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++ +IR + S P + + K E + P+ LTF FL+ C GKQ+H
Sbjct: 81 YDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHC 140
Query: 134 DAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
VK G+ SD +V ++ Y K + DARKVFDE+P+ V W+ ++ V
Sbjct: 141 WVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGS 200
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTAL 251
+G+E F +M G EPDE S+ L+ACA++G L+ G+W+H V + + S +GTAL
Sbjct: 201 EGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTAL 260
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
VDMY K G + A VFE++ +RNV +W+A+I G A +G+A++A + + + E D I+P
Sbjct: 261 VDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI-EREDGIKP 319
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
+ V LGVL AC+H G ++EG ME +GI P HY +VD+ RAG L +A +
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDL 379
Query: 372 IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP----RRGGNLVIVANL 427
I+ MP+ P VW LL+ C H +G+ + LL +E LV ++N+
Sbjct: 380 IEKMPMKPLASVWGALLNGCR---THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNI 436
Query: 428 YAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
Y A VR ++ G++K G S +++ G + +F +G S P+L+ ++ L+ L
Sbjct: 437 YFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Query: 488 NL 489
++
Sbjct: 497 SV 498
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 231/438 (52%), Gaps = 4/438 (0%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPI-EAIWVFRKMRERGVKPNKLTFPFLLK 117
L RK+ +SWN +I A S+ + EA+ F + G K N++TF +L
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP-V 176
+ S GKQ+H A+K + + N LI YG+C ++ K+F M ER V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+WNS+I+ + N L ++ M +G D +LSA A + L G VH
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 645
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
V + +G+ALVDMY K G L YA F M RN +W++MI G A+HG EEAL
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
LFE M + P++VT++GVL ACSHAG+++EG+++F M +G+ P + H+ M
Sbjct: 706 KLFETMKLD-GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
D+ GRAG L + +FI+ MP+ P+ ++WRT+L AC + + +G K + L +EP
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR-KAELGKKAAEMLFQLEPE 823
Query: 417 RGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
N V++ N+YA G WE R+ M+D +KK AG S V + + F AG S PD
Sbjct: 824 NAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPD 883
Query: 477 LIPVYHLLDGLNLHLKMA 494
+Y L LN ++ A
Sbjct: 884 ADVIYKKLKELNRKMRDA 901
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 13/326 (3%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK--CCAVGSALREGKQ 130
+ +SWN +I ++ + A +F M+ G +P + TF L+ C +R +Q
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ 229
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+ K GL +D++VG+ L++ + + + ARKVF++M R V+ N ++ V W
Sbjct: 230 IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKW 289
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGY-----LSLGRWVHCQVVLRGMV-LS 244
+ + F+ M S + S V++LS+ E L GR VH V+ G+V
Sbjct: 290 GEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+G LV+MY K G++ AR VF M ++ ++W++MI GL Q+G EA+ ++ M
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM-R 407
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
HD I P T + L +C+ G + E + GI + A++ +Y G
Sbjct: 408 RHD-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGY 465
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSA 390
L E + SMP D + W +++ A
Sbjct: 466 LNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 15/374 (4%)
Query: 25 LHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGF 84
L QI G + ++ S LV + + S +L++ARK+ T + ++ N L+ G
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLV--SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 85 ATSDSPIEAIWVFRKMRER-GVKPNKL-----TFPFLLKCCAVGSALREGKQVHADAVKF 138
EA +F M V P +FP VG L++G++VH +
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG--LKKGREVHGHVITT 342
Query: 139 GL-DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEY 197
GL D V +GN L+N Y +C I DAR+VF M ++ VSWNS+IT +N + VE
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 198 FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK 257
+ MR P +++ LS+CA L + LG+ +H + + G+ L+ + AL+ +Y +
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 258 SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFA-EEALSLFEMMSENHDNIRPNYVTY 316
+G L R +F M + + ++W+++I LA+ + EA+ F ++ + N +T+
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF--LNAQRAGQKLNRITF 520
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
VL A S + G + + + I A++ YG+ G + + M
Sbjct: 521 SSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Query: 377 VNPDPIVWRTLLSA 390
D + W +++S
Sbjct: 580 ERRDNVTWNSMISG 593
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 174/379 (45%), Gaps = 19/379 (5%)
Query: 26 HQIQAQFHIHGHYHNTYLLSELVYVC-----SLSPSKNLTHARKLVLHSATPSPISWNIL 80
H+ A+F Y N L + VY+C + + + ARK+ + +SW +
Sbjct: 16 HRGAARFFHSRLYKNR--LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 81 IRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA-VGS-ALREGKQVHADAVKF 138
+ G++ + EA+ R M + G+ N+ F +L+ C +GS + G+Q+H K
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 139 GLDSDVYVGNNLINFYGRC-KKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEY 197
D V N LI+ Y +C + A F ++ + VSWNS+I+ + R
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 198 FLKMRGSGFEPDETSMVLMLSACAELGY--LSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
F M+ G P E + +++ L + L + C + G++ +G+ LV +
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
KSG+L YAR VF +ME RN +T + +++GL + + EEA LF M+ D +YV
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 316 YLGVLCACSHAGMVDEGYRYFREME---YVHGIKPLMVHYG-AMVDIYGRAGLLREAYEF 371
L S A V G + RE+ G+ MV G +V++Y + G + +A
Sbjct: 314 LLSSFPEYSLAEEV--GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 372 IQSMPVNPDPIVWRTLLSA 390
M + D + W ++++
Sbjct: 372 FYFM-TDKDSVSWNSMITG 389
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 230/421 (54%), Gaps = 6/421 (1%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
S I+WNI+ G + + + A+ + +MR + + LK C++ A+R GK++H
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
A+ D V N LI Y +CK + A VF + E + +WNS+I+ +
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTAL 251
+ +M +GF+P+ ++ +L CA + L G+ HC ++ R L +L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
VD+Y KSG + A+ V + M KR+ +T++++I G G AL+LF+ M+ + I+P
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS--GIKP 481
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
++VT + VL ACSH+ +V EG R F +M+ +GI+P + H+ MVD+YGRAG L +A +
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 372 IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEA 431
I +MP P W TLL+AC + H T IG ++LL ++P G V++AN+YA A
Sbjct: 542 IHNMPYKPSGATWATLLNACHI---HGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAA 598
Query: 432 GMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHL 491
G W + A VR +MRD G+KK G + +D F G S P+ Y LLDGLN +
Sbjct: 599 GSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLM 658
Query: 492 K 492
K
Sbjct: 659 K 659
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 189/415 (45%), Gaps = 47/415 (11%)
Query: 14 SLLNLC---RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
SLL+ C R+ Q+ A G +++ L+ +LV S N A+ ++ +S
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHN--EAQSIIENSD 105
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
P+ WN+LI +A ++ E I +++M +G++P+ T+P +LK C + G+
Sbjct: 106 ILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA-CVENL 189
VH S +YV N LI+ Y R + + AR++FD M ER VSWN+VI E +
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 190 WLRDGVEYFLKMRGSGFEP-----------------------------------DETSMV 214
W + E F KM SG E D +M+
Sbjct: 226 W-SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR 274
+ L AC+ +G + LG+ +H + + L+ MY K L +A +VF + E+
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 275 NVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
++ TW+++I G AQ +EEA L EM+ +PN +T +L C+ + G
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVA---GFQPNSITLASILPLCARIANLQHGK 401
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+ + K + + ++VD+Y ++G + A + + + D + + +L+
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ-VSDLMSKRDEVTYTSLI 455
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 29/270 (10%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S K+L HA + + S +WN +I G+A + EA + R+M G +PN +T
Sbjct: 326 SKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLA 385
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSD-VYVGNNLINFYGRCKKILDARKVFDEMPE 172
+L CA + L+ GK+ H ++ D + N+L++ Y + KI+ A++V D M +
Sbjct: 386 SILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK 445
Query: 173 RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWV 232
R V++ S+I + F +M SG +PD ++V +LSAC+
Sbjct: 446 RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS----------- 494
Query: 233 HCQVVLRG----MVLSCQLG--------TALVDMYGKSGALGYARLVFERME-KRNVLTW 279
H ++V G M + C+ G + +VD+YG++G L A+ + M K + TW
Sbjct: 495 HSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATW 554
Query: 280 SAMILGLAQHGFAE----EALSLFEMMSEN 305
+ ++ HG + A L EM EN
Sbjct: 555 ATLLNACHIHGNTQIGKWAAEKLLEMKPEN 584
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 89/239 (37%), Gaps = 40/239 (16%)
Query: 191 LRDGVEYF--LKMRGSGFEPDET---SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSC 245
L D + F L+++ S D+ S +LSAC ++ G VH + G+
Sbjct: 19 LHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHS 78
Query: 246 QLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
L LV Y A+ + E + + L W+ +I A++ EE ++ ++ M
Sbjct: 79 VLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSK 138
Query: 306 HDNIRPNYVTYLGVLCACSHA-----GMVDEG--------------------YRYFREME 340
IRP+ TY VL AC G V G Y+ FR M
Sbjct: 139 --GIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 341 YVHGIKPLM-----VHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSAC 391
+ M V + A+++ Y G+ EA+E M V I W + C
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 258/488 (52%), Gaps = 18/488 (3%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIH------GHYHNTYLLSELVYVCSLSPSKNLTHARKLVL 67
+LL++ ++ +L +++ IH G Y + Y+L+ ++ S + L
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG--FISLYSKCGKIKMGSALFR 280
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
P +++N +I G+ ++ ++ +F+++ G + T L+ V L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST---LVSLVPVSGHLML 337
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
+H +K S V L Y + +I ARK+FDE PE++ SWN++I+ +
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
N D + F +M+ S F P+ ++ +LSACA+LG LSLG+WVH V S +
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENH 306
TAL+ MY K G++ AR +F+ M K+N +TW+ MI G HG +EAL++F EM+ +
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML---N 514
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
I P VT+L VL ACSHAG+V EG F M + +G +P + HY MVDI GRAG L+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVAN 426
A +FI++M + P VW TLL AC + H T + V ++L ++P G V+++N
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRI---HKDTNLARTVSEKLFELDPDNVGYHVLLSN 631
Query: 427 LYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDG 486
+++ + +AA VR+ + + K G + +++G + F +G S P + +Y L+
Sbjct: 632 IHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEK 691
Query: 487 LNLHLKMA 494
L ++ A
Sbjct: 692 LEGKMREA 699
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 198/421 (47%), Gaps = 32/421 (7%)
Query: 2 NTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTH 61
T +L +KN L SI L Q AQ +HG ++ LL++L LS + +
Sbjct: 13 TTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQ--RLSDLGAIYY 70
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRER-GVKPNKLTFPFLLKCCA 120
AR + L P +N+L+RGF+ ++SP ++ VF +R+ +KPN T+ F + +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
R G+ +H AV G DS++ +G+N++ Y + ++ DARKVFD MPE+ + WN+
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNT 190
Query: 181 VITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+I+ +N + ++ F + S D T+++ +L A AEL L LG +H
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G + T + +Y K G + +F K +++ ++AMI G +G E +LSLF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 300 EMMSENHDNIRPNYVTYL-----------GVLCAC------SHAGMVDEGYRYFREMEYV 342
+ + + +R + + L + C SHA + + ++ +
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 343 HGIKPL--------MVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSAC 391
+ L + + AM+ Y + GL +A + M +P+P+ +LSAC
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 392 S 392
+
Sbjct: 431 A 431
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 239/426 (56%), Gaps = 11/426 (2%)
Query: 35 HGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAI 94
HG N ++ S L Y+ ++ + AR++ P I W ++ F+ +D EA+
Sbjct: 192 HGFEWNHFISSTLAYLYGVN--REPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEAL 249
Query: 95 WVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINF 153
+F M R +G+ P+ TF +L C L++GK++H + G+ S+V V ++L++
Sbjct: 250 GLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 154 YGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSM 213
YG+C + +AR+VF+ M ++ VSW++++ +N +E F +M E D
Sbjct: 310 YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCF 365
Query: 214 VLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK 273
+L ACA L + LG+ +H Q V RG + + +AL+D+YGKSG + A V+ +M
Sbjct: 366 GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI 425
Query: 274 RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
RN++TW+AM+ LAQ+G EEA+S F M + I+P+Y++++ +L AC H GMVDEG
Sbjct: 426 RNMITWNAMLSALAQNGRGEEAVSFFNDMVKK--GIKPDYISFIAILTACGHTGMVDEGR 483
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSV 393
YF M +GIKP HY M+D+ GRAGL EA ++ D +W LL C+
Sbjct: 484 NYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAA 543
Query: 394 HDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMA 453
+ D + + +++ K ++ +EP+ + V+++N+Y G A N+R++M G+ K
Sbjct: 544 NA--DASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTV 601
Query: 454 GESCVD 459
G+S +D
Sbjct: 602 GQSWID 607
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 192/389 (49%), Gaps = 29/389 (7%)
Query: 14 SLLNLCRSI-DQLHQIQAQFHIHGHYHNTYLLSE-------LVYVCSLSPSKNLTHARKL 65
SLL C + +H IQ H H + L ++ L L P + R++
Sbjct: 66 SLLQTCNKVFSFIHGIQ----FHAHVVKSGLETDRNVGNSLLSLYFKLGP--GMRETRRV 119
Query: 66 VLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSAL 125
ISW ++ G+ T ++A+ VF +M G+ N+ T +K C+ +
Sbjct: 120 FDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEV 179
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITAC 185
R G+ H + G + + ++ + L YG ++ +DAR+VFDEMPE + W +V++A
Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAF 239
Query: 186 VENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
+N + + F M RG G PD ++ +L+AC L L G+ +H +++ G+ +
Sbjct: 240 SKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSN 299
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+ ++L+DMYGK G++ AR VF M K+N ++WSA++ G Q+G E+A+ +F M E
Sbjct: 300 VVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE 359
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM--EYV-HGIKPLMVHYGAMVDIYGR 361
+ + VL AC+ V R +E+ +YV G ++ A++D+YG+
Sbjct: 360 K------DLYCFGTVLKACAGLAAV----RLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+G + A M + + I W +LSA
Sbjct: 410 SGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 4/310 (1%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
EAI + + + LL+ C + G Q HA VK GL++D VGN+L+
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 152 NFYGRCKK-ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDE 210
+ Y + + + R+VFD + +SW S+++ V +E F++M G + +E
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER 270
++ + AC+ELG + LGR H V+ G + + + L +YG + AR VF+
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 271 MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVD 330
M + +V+ W+A++ +++ EEAL LF M + P+ T+ VL AC + +
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG-KGLVPDGSTFGTVLTACGNLRRLK 282
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+G ++ +GI +V +++D+YG+ G +REA + M + + W LL
Sbjct: 283 QGKEIHGKL-ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340
Query: 391 CSVHDAHDRT 400
+ H++
Sbjct: 341 YCQNGEHEKA 350
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 221/408 (54%), Gaps = 3/408 (0%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
ARKL + +WN I T P EAI F + R PN +TF L C+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
L G Q+H ++ G D+DV V N LI+FYG+CK+I + +F EM + VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+ A V+N +L+ R E + + +LSACA + L LGR +H V +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ +G+ALVDMYGK G + + F+ M ++N++T +++I G A G + AL+LFE
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
M+ PNY+T++ +L ACS AG V+ G + F M +GI+P HY +VD+ GR
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
AG++ AYEFI+ MP+ P VW L +AC + H + +G + L ++P+ GN
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRM---HGKPQLGLLAAENLFKLDPKDSGNH 518
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
V+++N +A AG W A VR ++ G+KK AG S + + + F A
Sbjct: 519 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQA 566
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 152/306 (49%), Gaps = 11/306 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW LI G A + A+ F +MR GV PN TFP K A GKQ+HA
Sbjct: 74 VSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHAL 133
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
AVK G DV+VG + + Y + + DARK+FDE+PER +WN+ I+ V + R+
Sbjct: 134 AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+E F++ R P+ + L+AC++ +L+LG +H V+ G + L+D
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 253
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
YGK + + ++F M +N ++W +++ Q+ E+A L+ + D + +
Sbjct: 254 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY--LRSRKDIVETSDF 311
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY----GAMVDIYGRAGLLREAYE 370
VL AC AGM G R + + H +K + A+VD+YG+ G + ++ +
Sbjct: 312 MISSVLSAC--AGMA--GLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 371 FIQSMP 376
MP
Sbjct: 367 AFDEMP 372
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 11/322 (3%)
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDV--YVGNNLINFYGRCKKILDARKVFDEMP 171
LLK S++R G+ VHA VK LDS ++ N LIN Y + AR V P
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
R VSW S+I+ +N + F +MR G P++ + A A L G+
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H V G +L +G + DMY K+ AR +F+ + +RN+ TW+A I G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
EA+ F + + PN +T+ L ACS ++ G + + G +
Sbjct: 190 PREAIEAF--IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ-LHGLVLRSGFDTDVSV 246
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
++D YG+ +R + E I + + + W +L++A V + D +R
Sbjct: 247 CNGLIDFYGKCKQIRSS-EIIFTEMGTKNAVSWCSLVAA-YVQNHEDEKASVLYLRSRKD 304
Query: 412 LVEPRRGGNLVIVANLYAEAGM 433
+VE + +I + L A AGM
Sbjct: 305 IVET---SDFMISSVLSACAGM 323
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
K + + + T + +SW L+ + + +A ++ + R+ V+ + +L
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
CA + L G+ +HA AVK ++ ++VG+ L++ YG+C I D+ + FDEMPE+ V
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Query: 177 SWNSVITACVENLWLRDGVEYFLKM--RGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
+ NS+I + + F +M RG G P+ + V +LSAC+ G + G +
Sbjct: 378 TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD 437
Query: 235 QV-VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLT-WSAMILGLAQHGFA 292
+ G+ + + +VDM G++G + A ++M + ++ W A+ HG
Sbjct: 438 SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKP 497
Query: 293 EEAL----SLFEMMSENHDN 308
+ L +LF++ ++ N
Sbjct: 498 QLGLLAAENLFKLDPKDSGN 517
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 231/412 (56%), Gaps = 18/412 (4%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRER-GVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
WN +I G++ ++ EA+ +F M E G+ N T ++ C A + +H
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
VK GLD D +V N L++ Y R KI A ++F +M +R V+WN++IT V + D +
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 196 EYFLKMRG-----------SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
KM+ +P+ +++ +L +CA L L+ G+ +H + +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+G+ALVDMY K G L +R VF+++ ++NV+TW+ +I+ HG +EA+ L MM
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
++PN VT++ V ACSH+GMVDEG R F M+ +G++P HY +VD+ GRAG
Sbjct: 612 Q--GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 365 LREAYEFIQSMPVNPDPI-VWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVI 423
++EAY+ + MP + + W +LL A +H+ + IG+ + L+ +EP + V+
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE---IGEIAAQNLIQLEPNVASHYVL 726
Query: 424 VANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
+AN+Y+ AG+W++A VRR M++ G++K G S ++ G + +F AG S P
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 778
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 164/337 (48%), Gaps = 26/337 (7%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA---VGSALREGKQV 131
+SWN LI + + A+ FR M + V+P+ T ++ C+ + L GKQV
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
HA ++ G + + ++ N L+ YG+ K+ ++ + R V+WN+V+++ +N L
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV-LSCQLGTA 250
+ +EY +M G EPDE ++ +L AC+ L L G+ +H + G + + +G+A
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
LVDMY + R VF+ M R + W+AMI G +Q+ +EAL LF M E+ +
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA-GLL 402
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG---------AMVDIYGR 361
N T GV+ AC +G F E +HG +V G ++D+Y R
Sbjct: 403 ANSTTMAGVVPACVRSGA-------FSRKEAIHG---FVVKRGLDRDRFVQNTLMDMYSR 452
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHD 398
G + A M + D + W T+++ + H+
Sbjct: 453 LGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHE 488
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 139/273 (50%), Gaps = 11/273 (4%)
Query: 66 VLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSAL 125
+ S + SP W L+R S+ EA+ + M G+KP+ FP LLK A +
Sbjct: 54 IFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDM 113
Query: 126 REGKQVHADAVKFGLDSD-VYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
GKQ+HA KFG D V V N L+N Y +C KVFD + ER VSWNS+I++
Sbjct: 114 ELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 185 -CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGY---LSLGRWVHCQVVLRG 240
C W +E F M EP ++V +++AC+ L L +G+ VH + +G
Sbjct: 174 LCSFEKW-EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS-LF 299
+ S + T LV MYGK G L ++++ R+++TW+ ++ L Q+ EAL L
Sbjct: 233 ELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
EM+ E + P+ T VL ACSH M+ G
Sbjct: 292 EMVLE---GVEPDEFTISSVLPACSHLEMLRTG 321
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 142/281 (50%), Gaps = 19/281 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMR--ERGV---------KPNKLTFPFLLKCCAVGS 123
++WN +I G+ S+ +A+ + KM+ ER V KPN +T +L CA S
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
AL +GK++HA A+K L +DV VG+ L++ Y +C + +RKVFD++P++ ++WN +I
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG-RWVHCQVVLRGMV 242
A + ++ ++ M G +P+E + + + +AC+ G + G R + G+
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEK--RNVLTWSAMILGLAQHGFAEEALSLFE 300
S +VD+ G++G + A + M + WS+++ H L + E
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN----NLEIGE 707
Query: 301 MMSENHDNIRPNYVTYLGVLCAC-SHAGMVDEGYRYFREME 340
+ ++N + PN ++ +L S AG+ D+ R M+
Sbjct: 708 IAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 6 LSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTH 61
+S K ++L+ + S L + IH + L +++ +L + L
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
+RK+ + I+WN++I + + EAI + R M +GVKPN++TF + C+
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 122 GSALREGKQV-HADAVKFGLD--SDVYVGNNLINFYGRCKKILDARKVFDEMPE--RTPV 176
+ EG ++ + +G++ SD Y +++ GR +I +A ++ + MP
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688
Query: 177 SWNSVITA 184
+W+S++ A
Sbjct: 689 AWSSLLGA 696
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/450 (33%), Positives = 234/450 (52%), Gaps = 25/450 (5%)
Query: 44 LSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGF-----ATSDSPIEAIWVFR 98
L E + + SL PSKN+ +++N +I GF T ++ EA +F
Sbjct: 303 LKEAIKLFSLMPSKNV---------------VTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 99 KMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK 158
M+ RG++P+ TF +LK C+ L G+Q+HA K SD ++G+ LI Y
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 159 KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLS 218
D + F ++ SW S+I V+N L + F ++ S P+E ++ LM+S
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Query: 219 ACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLT 278
ACA+ LS G + + G+ + T+ + MY KSG + A VF ++ +V T
Sbjct: 468 ACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVAT 527
Query: 279 WSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFRE 338
+SAMI LAQHG A EAL++FE M + I+PN +LGVL AC H G+V +G +YF+
Sbjct: 528 YSAMISSLAQHGSANEALNIFESMKTH--GIKPNQQAFLGVLIACCHGGLVTQGLKYFQC 585
Query: 339 MEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHD 398
M+ + I P H+ +VD+ GR G L +A I S P+ WR LLS+C V +
Sbjct: 586 MKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV---YK 642
Query: 399 RTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCV 458
+ IG +V + L+ +EP G+ V++ N+Y ++G+ A VR +MRD G+KK S +
Sbjct: 643 DSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Query: 459 DLGGSMIRFFAGYDSRPDLIPVYHLLDGLN 488
+G F S P +Y +L+ ++
Sbjct: 703 VIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 13/347 (3%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
+ L AR+L + IS+N LI G+ +A+ +F + RE +K +K T+ L
Sbjct: 96 RELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL 155
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
C L G+ +H V GL V++ N LI+ Y +C K+ A +FD ER V
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA---ELGYLSLGRWVH 233
SWNS+I+ V + + KM G ++ +L AC G++ G +H
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ----- 288
C GM + TAL+DMY K+G+L A +F M +NV+T++AMI G Q
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPL 348
+ EA LF M + P+ T+ VL ACS A ++ G R + + +
Sbjct: 336 DEASSEAFKLF--MDMQRRGLEPSPSTFSVVLKACSAAKTLEYG-RQIHALICKNNFQSD 392
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
A++++Y G + + S D W +++ C V +
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMID-CHVQN 437
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 150/282 (53%), Gaps = 9/282 (3%)
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
+ L + A ++ GK H +K L+ +Y+ NNL+N Y +C+++ AR++FD MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
ER +S+NS+I+ + + +E FL+ R + + D+ + L C E L LG
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H VV+ G+ L L+DMY K G L A +F+R ++R+ ++W+++I G + G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 292 AEEALSLFEMMSENHDNIRPNYV-TYLGVLCACSHAGMVDEG---YRYFREMEYVHGIKP 347
AEE L+L M + N+ + + L C + G +++G + Y ++ G++
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL----GMEF 285
Query: 348 LMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
+V A++D+Y + G L+EA + MP + + + + ++S
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMIS 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVF 268
D ++ A+ G + LG+ H ++ + L L++MY K LG+AR +F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 269 ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM 328
+RM +RN+++++++I G Q GF E+A+ LF + N++ + TY G L C
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELF--LEAREANLKLDKFTYAGALGFCGERCD 163
Query: 329 VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+D G + V+G+ + ++D+Y + G L +A D + W +L+
Sbjct: 164 LDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLI 221
Query: 389 S 389
S
Sbjct: 222 S 222
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 219/386 (56%), Gaps = 5/386 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
++WN ++ G+ S + + +F M ++G + + T + K C A+ +GKQVHA
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
A+K G D D++V + +++ Y +C + A+ FD +P V+W ++I+ C+EN
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
F +MR G PDE ++ + A + L L GR +H + +GT+LVDM
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G++ A +F+R+E N+ W+AM++GLAQHG +E L LF+ M I+P+ V
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL--GIKPDKV 720
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T++GVL ACSH+G+V E Y++ R M +GIKP + HY + D GRAGL+++A I+S
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
M + ++RTLL+AC V T G +V +LL +EP V+++N+YA A W
Sbjct: 781 MSMEASASMYRTLLAACRV---QGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 837
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDL 460
+ R +M+ +KK G S +++
Sbjct: 838 DEMKLARTMMKGHKVKKDPGFSWIEV 863
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)
Query: 97 FRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGR 156
F M E V+ +++TF +L +L G+QVH A+K GLD + V N+LIN Y +
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 157 CKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLM 216
+K AR VFD M ER +SWNSVI +N + V F+++ G +PD+ +M +
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 217 LSACAELGY-LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
L A + L LSL + VH + V + TAL+D Y ++ + A ++FER +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFD 481
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
++ W+AM+ G Q + L LF +M + + R + T V C +++G +
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE--RSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 336 FREMEYVHGIKP-----LMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+ + IK L V G ++D+Y + G + A S+PV PD + W T++S
Sbjct: 540 -----HAYAIKSGYDLDLWVSSG-ILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISG 592
Query: 391 CSVHDAHDR 399
C + +R
Sbjct: 593 CIENGEEER 601
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P ++W +I G + A VF +MR GV P++ T L K + +AL +G+Q+
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
HA+A+K +D +VG +L++ Y +C I DA +F + +WN+++ ++
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG----RWVHCQVVLRGMVLSCQL 247
++ ++ F +M+ G +PD+ + + +LSAC+ G +S R +H G+ +
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY---GIKPEIEH 757
Query: 248 GTALVDMYGKSGALGYARLVFERM 271
+ L D G++G + A + E M
Sbjct: 758 YSCLADALGRAGLVKQAENLIESM 781
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
L+ S L GK HA + F + + ++ NNLI+ Y +C + AR+VFD+MP+R
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 175 PVSWNSVITA-------CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS 227
VSWNS++ A VEN ++ F +R ++ ML C GY+
Sbjct: 105 LVSWNSILAAYAQSSECVVEN--IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 228 LGRWVH---CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMIL 284
H C++ L G + ALV++Y K G + +++FE M R+V+ W+ M+
Sbjct: 163 ASESFHGYACKIGLDGDEF---VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 285 GLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
+ GF EEA+ L + + PN +T
Sbjct: 220 AYLEMGFKEEAIDLSSAF--HSSGLNPNEIT 248
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 42 YLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPI-----EAIWV 96
+L++ L+ + S +LT+AR++ +SWN ++ +A S + +A +
Sbjct: 75 FLINNLISM--YSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 97 FRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGR 156
FR +R+ V +++T +LK C + + H A K GLD D +V L+N Y +
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK 192
Query: 157 CKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLM 216
K+ + + +F+EMP R V WN ++ A +E + + ++ SG P+E ++ L+
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 226 LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILG 285
L LG+ H +++ L L+ MY K G+L YAR VF++M R++++W++++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 286 LAQHGFA-----EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
AQ ++A LF ++ + D + + +T +L C H+G V F
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQ--DVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYA 171
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
G+ GA+V+IY + G ++E + MP D ++W +L A
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 268/491 (54%), Gaps = 24/491 (4%)
Query: 12 CLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSAT 71
C SL ++ S Q HQ Q + G+ + ++ S L+ + S L ARK+
Sbjct: 86 CSSLFDIF-SGKQTHQ---QAFVFGYQSDIFVSSALIVM--YSTCGKLEDARKVFDEIPK 139
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKM------RERGVKPNKLTFPFLLKCCAVGSAL 125
+ +SW +IRG+ + + ++A+ +F+ + + + + + ++ C+ A
Sbjct: 140 RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAK 199
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK--ILDARKVFDEMPERTPVSWNSVIT 183
+ +H+ +K G D V VGN L++ Y + + + ARK+FD++ ++ VS+NS+++
Sbjct: 200 GLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMS 259
Query: 184 ACVENLWLRDGVEYF---LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
++ + E F +K + F S VL+ A + G L +G+ +H QV+ G
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLL--AVSHSGALRIGKCIHDQVIRMG 317
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
+ +GT+++DMY K G + AR F+RM+ +NV +W+AMI G HG A +AL LF
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M ++ +RPNY+T++ VL ACSHAG+ EG+R+F M+ G++P + HYG MVD+ G
Sbjct: 378 AMIDS--GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLG 435
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGN 420
RAG L++AY+ IQ M + PD I+W +LL+AC +H + I L ++ G
Sbjct: 436 RAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEIS---VARLFELDSSNCGY 492
Query: 421 LVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPV 480
++++++YA+AG W+ VR +M++ G+ K G S ++L G + F G + P +
Sbjct: 493 YMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI 552
Query: 481 YHLLDGLNLHL 491
Y L LN L
Sbjct: 553 YEFLAELNRKL 563
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 162/328 (49%), Gaps = 11/328 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
SWN +I A S EA+ F MR+ + P + +FP +K C+ + GKQ H
Sbjct: 42 FSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQ 101
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
A FG SD++V + LI Y C K+ DARKVFDE+P+R VSW S+I N D
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 195 VEYFLKMRGSGFEPDET------SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
V F + + D+ +V ++SAC+ + L +H V+ RG +G
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 249 TALVDMYGK--SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L+D Y K G + AR +F+++ ++ +++++++ AQ G + EA +F + +N
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+ N +T VL A SH+G + G + + G++ ++ +++D+Y + G +
Sbjct: 282 -VVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVH 394
A + M N + W +++ +H
Sbjct: 340 TARKAFDRMK-NKNVRSWTAMIAGYGMH 366
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 241/500 (48%), Gaps = 54/500 (10%)
Query: 8 NKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTY-----LLSELVYVCSLSPSKN---- 58
N + C LL LCR++ LHQ AQF G N + + L + S+SPS +
Sbjct: 3 NYSSCSYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKE 62
Query: 59 -LTHARKLVLHSATPSPISWNILIRGFATSD-SPIEAIWVFRKMRERGVKPNKLTFPFLL 116
+++A + PS +N +IR + S + + F +MR R V P+ TFPF+
Sbjct: 63 VVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVF 122
Query: 117 KCCAV--GSALREGKQVHADAVKFGLDSDVYVGNNLINFYG------------------- 155
K CA L K +H A++FGL SD++ N LI Y
Sbjct: 123 KACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRD 182
Query: 156 ------------RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
+ ++I+ AR++FD MP R VSWNS+I+ + R+ ++ F +M
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
G +PD ++V LSACA+ G G+ +H + + + L T LVD Y K G +
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 264 ARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
A +FE + + TW+AMI GLA HG E + F M + I+P+ VT++ VL C
Sbjct: 303 AMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS--GIKPDGVTFISVLVGC 360
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN----P 379
SH+G+VDE F +M ++ + M HYG M D+ GRAGL+ EA E I+ MP +
Sbjct: 361 SHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNRE 420
Query: 380 DPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAAN 439
+ W LL C + H I +K + + P GG ++ +YA A WE
Sbjct: 421 KLLAWSGLLGGCRI---HGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVK 477
Query: 440 VRRVM-RDGGMKKMAGESCV 458
VR ++ RD +KK G S V
Sbjct: 478 VREIIDRDKKVKKNVGFSKV 497
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 245/418 (58%), Gaps = 6/418 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
ISW +I G+A +D +EA+ +FR + ++ ++ +++ +L+ +V ++ K++H
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
++ GL D + N L++ YG+C+ + A +VF+ + + VSW S+I++ N +
Sbjct: 513 ILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
VE F +M +G D +++ +LSA A L L+ GR +HC ++ +G L + A+VDM
Sbjct: 572 VELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM 631
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y G L A+ VF+R+E++ +L +++MI HG + A+ LF+ M H+N+ P+++
Sbjct: 632 YACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM--RHENVSPDHI 689
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
++L +L ACSHAG++DEG + + ME+ + ++P HY +VD+ GRA + EA+EF++
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
M P VW LL+AC H + IG+ + LL +EP+ GNLV+V+N++AE G W
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKE---IGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
VR M+ GM+K G S +++ G + +F A S P+ +Y L + L+
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 192/388 (49%), Gaps = 19/388 (4%)
Query: 12 CLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVL-HSA 70
C L ++ RS +LH + + G++ ++++ LV + + + +L+ AR+L
Sbjct: 192 CAKLRDI-RSGSELHSLLVKL---GYHSTGFIVNALVSM--YAKNDDLSAARRLFDGFQE 245
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ WN ++ ++TS +E + +FR+M G PN T L C S + GK+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 131 VHADAVKFGL-DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
+HA +K S++YV N LI Y RC K+ A ++ +M V+WNS+I V+NL
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
++ +E+F M +G + DE SM +++A L L G +H V+ G + Q+G
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
L+DMY K Y F RM +++++W+ +I G AQ+ EAL LF +++ I
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM---VHYGAMVDIYGRAGLLR 366
+L + A V + +E+ + H ++ + V +VD+YG+ +
Sbjct: 486 DEM------ILGSILRASSVLKSMLIVKEI-HCHILRKGLLDTVIQNELVDVYGKCRNMG 538
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVH 394
A +S+ D + W +++S+ +++
Sbjct: 539 YATRVFESIK-GKDVVSWTSMISSSALN 565
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 186/396 (46%), Gaps = 26/396 (6%)
Query: 15 LLNLC---RSIDQLHQIQAQ-FHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
+L LC R++ Q Q+ ++ F + +L +LV++ +L A K+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM--YGKCGSLDDAEKVFDEMP 143
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ +WN +I + ++ P A+ ++ MR GV +FP LLK CA +R G +
Sbjct: 144 DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER-TPVSWNSVITACVENL 189
+H+ VK G S ++ N L++ Y + + AR++FD E+ V WNS++++ +
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL-- 247
+ +E F +M +G P+ ++V L+AC Y LG+ +H VL+ S +L
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS-VLKSSTHSSELYV 322
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENH 306
AL+ MY + G + A + +M +V+TW+++I G Q+ +EAL F +M++ H
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 307 DNIRPNYVTYLGVLCACSH-----AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
+ + V+ ++ A AGM Y HG + ++D+Y +
Sbjct: 383 ---KSDEVSMTSIIAASGRLSNLLAGMELHAYV------IKHGWDSNLQVGNTLIDMYSK 433
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAH 397
L M + D I W T+++ + +D H
Sbjct: 434 CNLTCYMGRAFLRMH-DKDLISWTTVIAGYAQNDCH 468
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 25/290 (8%)
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVK----FGLDSDVYVGNNLINFYGRCKKILDARKV 166
F ++L+ C A+ +G+Q+H+ K F LD ++ L+ YG+C + DA KV
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD---FLAGKLVFMYGKCGSLDDAEKV 138
Query: 167 FDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL 226
FDEMP+RT +WN++I A V N + + MR G +S +L ACA+L +
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 227 SLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM-EKRNVLTWSAMILG 285
G +H +V G + + ALV MY K+ L AR +F+ EK + + W++++
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHG- 344
+ G + E L LF M + PN T + L AC +G+ Y + + +H
Sbjct: 259 YSTSGKSLETLELFREM--HMTGPAPNSYTIVSALTAC-------DGFSYAKLGKEIHAS 309
Query: 345 IKPLMVHYG------AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+ H A++ +Y R G + +A ++ M N D + W +L+
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 20/282 (7%)
Query: 40 NTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRK 99
+T + +ELV V +N+ +A ++ +SW +I A + + EA+ +FR+
Sbjct: 520 DTVIQNELVDV--YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 100 MRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK 159
M E G+ + + +L A SAL +G+++H ++ G + + +++ Y C
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 160 ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
+ A+ VFD + + + + S+I A + + VE F KMR PD S + +L A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLG------TALVDMYGKSGALGYARLVFERMEK 273
C+ G L GR L+ M +L LVDM G++ + A F +M K
Sbjct: 698 CSHAGLLDEGRG-----FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA-FEFVKMMK 751
Query: 274 R--NVLTWSAMILGLAQHGFAE----EALSLFEMMSENHDNI 309
W A++ H E A L E+ +N N+
Sbjct: 752 TEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 235/440 (53%), Gaps = 11/440 (2%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+++ A K+ + W+ +I F + EA+ +F +MRE V PN+ T +L
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
CA+G G+Q+H VK G D D+YV N LI+ Y +C+K+ A K+F E+ + VS
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGS---GFEPDETSMVLMLSACAELGYLSLGRWVHC 234
WN+VI ENL +G + F R + E + L ACA L + LG VH
Sbjct: 417 WNTVIVG-YENL--GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ + +L+DMY K G + +A+ VF ME +V +W+A+I G + HG +
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
AL + ++M + + +PN +T+LGVL CS+AG++D+G F M HGI+P + HY
Sbjct: 534 ALRILDIMKDR--DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
MV + GR+G L +A + I+ +P P ++WR +LSA + + + +E+L +
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEE---FARRSAEEILKIN 648
Query: 415 PRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSR 474
P+ V+V+N+YA A W A++R+ M++ G+KK G S ++ G + F G
Sbjct: 649 PKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDH 708
Query: 475 PDLIPVYHLLDGLNLHLKMA 494
PD+ + +L+ LN+ A
Sbjct: 709 PDMKLINGMLEWLNMKATRA 728
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 145/323 (44%), Gaps = 26/323 (8%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+S+ L +G+A D I ++ ++ G + N F LK +H+
Sbjct: 116 VSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
VK G DS+ +VG LIN Y C + AR VF+ + + V W +++ VEN + D
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
++ MR +GF P+ + L A LG + VH Q++ VL ++G L+ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y + G + A VF M K +V+ WS MI Q+GF EA+ LF M E + PN
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF--VVPNEF 349
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG---------AMVDIYGRAGLL 365
T +L C+ G E +HG L+V G A++D+Y + +
Sbjct: 350 TLSSILNGCAIGKCSGLG-------EQLHG---LVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 366 REAYEFIQSMPVNPDPIVWRTLL 388
A + + + + + W T++
Sbjct: 400 DTAVKLFAELS-SKNEVSWNTVI 421
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 191/439 (43%), Gaps = 22/439 (5%)
Query: 36 GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
G+ N ++ + L+ S+ S + AR + + W ++ + + +++
Sbjct: 176 GYDSNAFVGAALINAYSVCGS--VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLK 233
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
+ MR G PN TF LK A K VH +K D VG L+ Y
Sbjct: 234 LLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT 293
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
+ + DA KVF+EMP+ V W+ +I +N + + V+ F++MR + P+E ++
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
+L+ CA LG +H VV G L + AL+D+Y K + A +F + +N
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
++W+ +I+G G +A S+F N + VT+ L AC+ +D G +
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQ--VSVTEVTFSSALGACASLASMDLGVQV 471
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
+ K + V +++D+Y + G ++ A M D W L+S S H
Sbjct: 472 HGLAIKTNNAKKVAVS-NSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTH- 528
Query: 396 AHDRTGIGDKVRKELLLVEPR----RGGNLVIVANLYAEAGMWERAAN-VRRVMRDGGMK 450
G+G + + L +++ R G + V + + AG+ ++ ++RD G+
Sbjct: 529 -----GLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI- 582
Query: 451 KMAGESCVDLGGSMIRFFA 469
E C++ M+R
Sbjct: 583 ----EPCLEHYTCMVRLLG 597
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 23 DQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIR 82
+QLH + + G + Y+ + L+ V + + + A KL ++ + +SWN +I
Sbjct: 368 EQLHGLVVKV---GFDLDIYVSNALIDV--YAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 83 GFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDS 142
G+ +A +FR+ V ++TF L CA +++ G QVH A+K
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 143 DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMR 202
V V N+LI+ Y +C I A+ VF+EM SWN++I+ + R + M+
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 203 GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSC-QLGTALVDMYGKSGAL 261
+P+ + + +LS C+ G + G+ ++ + C + T +V + G+SG L
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 262 GYARLVFERME-KRNVLTWSAMI 283
A + E + + +V+ W AM+
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAML 625
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 8/275 (2%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
+L+ C + K +H D +K G D++ N L+N Y + DA +FDEMPER
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
VS+ ++ + +D + + ++ G E + L L + W+H
Sbjct: 115 NVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+V G + +G AL++ Y G++ AR VFE + ++++ W+ ++ ++G+ E+
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
+L L M PN T+ L A G D ++ + V G
Sbjct: 231 SLKLLSCM--RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG- 287
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
++ +Y + G + +A++ MP N D + W +++
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIA 321
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 253/492 (51%), Gaps = 42/492 (8%)
Query: 31 QFHIH----GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFAT 86
+ H H G N Y+ + LV + SL ++ AR + SWN++I G+
Sbjct: 156 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM--ARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 87 SDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYV 146
E+I + +M V P +T +L C+ K+VH + + + +
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 147 GNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE--NL--------------- 189
N L+N Y C ++ A ++F M R +SW S++ VE NL
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 190 ---------WLRDG-----VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+LR G +E F +M+ +G PDE +MV +L+ACA LG L +G W+
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+ + +G AL+DMY K G A+ VF M++R+ TW+AM++GLA +G +EA
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
+ +F M + +I+P+ +TYLGVL AC+H+GMVD+ ++F +M H I+P +VHYG M
Sbjct: 454 IKVFFQMQDM--SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
VD+ GRAGL++EAYE ++ MP+NP+ IVW LL A +H+ + + K++L +EP
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEP---MAELAAKKILELEP 568
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
G ++ N+YA W+ VRR + D +KK G S +++ G F AG S
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628
Query: 476 DLIPVYHLLDGL 487
+Y L+ L
Sbjct: 629 QSEEIYMKLEEL 640
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 217/472 (45%), Gaps = 74/472 (15%)
Query: 3 TRSLSNK-NQCLSLLNLCRSIDQLHQIQAQFHIHGHYHN-TYLLSELVYVCSLSPSKNLT 60
T S+SN ++ +S+L +C++ DQ Q+ +Q G N T+ V+ CS +++
Sbjct: 27 TESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCS-RLGGHVS 85
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
+A KL + P + WN +I+G++ D E + ++ M + GV P+ TFPFLL
Sbjct: 86 YAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK 145
Query: 121 V-GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
G AL GK++H VKFGL S++YV N L+ Y C + AR VFD + SWN
Sbjct: 146 RDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWN 205
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+I+ + +E ++M + P +++L+LSAC+++ L + VH V
Sbjct: 206 LMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
S +L ALV+ Y G + A +F M+ R+V++W++++ G + G + A + F
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 300 EMM---------------------SENHDNIR--------PNYVTYLGVLCACSHAGMVD 330
+ M +E+ + R P+ T + VL AC+H G ++
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF------------------- 371
G + + + IK +V A++D+Y + G +A +
Sbjct: 386 IG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 372 ---------------IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK 408
+Q M + PD I + +LSAC + +G+ D+ RK
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC------NHSGMVDQARK 490
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 254/485 (52%), Gaps = 9/485 (1%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLH 68
++L+ L + +L + +HG ++L V SL + S+ A L
Sbjct: 164 VTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKM 223
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG 128
A ISW+ +I + + + EA+ VF M + G +PN T +L+ CA L +G
Sbjct: 224 IAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN 188
++ H A++ GL+++V V L++ Y +C +A VF +P + VSW ++I+ N
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 189 LWLRDGVEYF-LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+E F + + + PD MV +L +C+ELG+L + H V+ G + +
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
G +LV++Y + G+LG A VF + ++ + W+++I G HG +AL F M ++ +
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
++PN VT+L +L ACSHAG++ EG R F+ M + + P + HY +VD+ GR G L
Sbjct: 464 -VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDT 522
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANL 427
A E + MP +P P + TLL AC +H + + + V K+L +E G ++++N+
Sbjct: 523 AIEITKRMPFSPTPQILGTLLGACRIHQNGE---MAETVAKKLFELESNHAGYYMLMSNV 579
Query: 428 YAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
Y G WE +R ++ G+KK ES +++ + RF A + P+ PVY LL L
Sbjct: 580 YGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Query: 488 NLHLK 492
+LH+K
Sbjct: 640 DLHMK 644
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 6/341 (1%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
AR++ S WN L++ + E ++ F M KP+ T P LK C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 122 GSALREGKQVHADAVK-FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
+ G+ +H K L SD+YVG++LI Y +C ++++A ++FDE+ + V+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 181 VITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+++ +N VE+F +M S PD +++ ++SAC +L LGR VH V+ R
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G L +L++ Y KS A A +F+ + +++V++WS +I Q+G A EAL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
M + D PN T L VL AC+ A +++G R E+ G++ + A+VD+Y
Sbjct: 253 NDMMD--DGTEPNVATVLCVLQACAAAHDLEQG-RKTHELAIRKGLETEVKVSTALVDMY 309
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
+ EAY +P D + W L+S +++ R+
Sbjct: 310 MKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRS 349
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 187/382 (48%), Gaps = 11/382 (2%)
Query: 20 RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCS-----LSPSKNLTHARKLVLHSATPSP 74
++ +L ++ IHG L +YV S + A ++ P
Sbjct: 68 KACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDI 127
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++W+ ++ GF + SP +A+ FR+M V P+++T L+ C S R G+ VH
Sbjct: 128 VTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
++ G +D+ + N+L+N Y + + +A +F + E+ +SW++VI V+N +
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+ F M G EP+ +++ +L ACA L GR H + +G+ ++ TALVD
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE-MMSENHDNIRPN 312
MY K + A VF R+ +++V++W A+I G +G A ++ F M+ EN N RP+
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN--NTRPD 365
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
+ + VL +CS G +++ + F +G ++V++Y R G L A +
Sbjct: 366 AILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 373 QSMPVNPDPIVWRTLLSACSVH 394
+ + D +VW +L++ +H
Sbjct: 425 NGIALK-DTVVWTSLITGYGIH 445
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 123/252 (48%), Gaps = 20/252 (7%)
Query: 155 GRCKKI---LDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
G C+K +DAR++F EM +R+ WN+++ + + + +F M +PD
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL--GTALVDMYGKSGALGYARLVFE 269
++ + L AC EL ++ G +H V + + L L G++L+ MY K G + A +F+
Sbjct: 62 TLPVALKACGELREVNYGEMIH-GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 270 RMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC-----S 324
+EK +++TWS+M+ G ++G +A+ F M D + P+ VT + ++ AC S
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLVSACTKLSNS 179
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVW 384
G G+ R G + ++++ Y ++ +EA + M D I W
Sbjct: 180 RLGRCVHGFVIRR------GFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISW 232
Query: 385 RTLLSACSVHDA 396
T++ AC V +
Sbjct: 233 STVI-ACYVQNG 243
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 258/500 (51%), Gaps = 17/500 (3%)
Query: 3 TRSLSNKNQCLSLLNLC----RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKN 58
++ S Q LL LC S+ ++ +G + +L ++L+ + S +
Sbjct: 70 SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM--YSDLGS 127
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ +ARK+ + + WN L R + E + ++ KM GV+ ++ T+ ++LK
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 119 CAVGSA----LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
C L +GK++HA + G S VY+ L++ Y R + A VF MP R
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKM--RGSGFEPDETSMVLMLSACAELGYLSLGRWV 232
VSW+++I +N + + F +M P+ +MV +L ACA L L G+ +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 233 HCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFA 292
H ++ RG+ + +ALV MYG+ G L + VF+RM R+V++W+++I HG+
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
++A+ +FE M N P VT++ VL ACSH G+V+EG R F M HGIKP + HY
Sbjct: 368 KKAIQIFEEMLAN--GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425
Query: 353 GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL 412
MVD+ GRA L EA + +Q M P P VW +LL +C + H + ++ + L
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI---HGNVELAERASRRLFA 482
Query: 413 VEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYD 472
+EP+ GN V++A++YAEA MW+ V++++ G++K+ G +++ M F + +
Sbjct: 483 LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDE 542
Query: 473 SRPDLIPVYHLLDGLNLHLK 492
P + ++ L L +K
Sbjct: 543 FNPLMEQIHAFLVKLAEDMK 562
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 237/430 (55%), Gaps = 5/430 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ AR + +SWN +I G+ S +EA+ +F+ M + + +T+ L+
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
+ L+ GK +H++ +K G+ D+ V N LI+ Y +C ++ D+ K+F M V+
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN+VI+ACV G++ +MR S PD + ++ L CA L LG+ +HC ++
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G Q+G AL++MY K G L + VFERM +R+V+TW+ MI +G E+AL
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F M ++ I P+ V ++ ++ ACSH+G+VDEG F +M+ + I P++ HY +VD
Sbjct: 597 TFADMEKS--GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR 417
+ R+ + +A EFIQ+MP+ PD +W ++L AC + ++V + ++ + P
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDME---TAERVSRRIIELNPDD 711
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDL 477
G ++ +N YA W++ + +R+ ++D + K G S +++G ++ F +G DS P
Sbjct: 712 PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQS 771
Query: 478 IPVYHLLDGL 487
+Y L+ L
Sbjct: 772 EAIYKSLEIL 781
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 26/345 (7%)
Query: 55 PSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPF 114
P+ +L+ R++ S + WN +IR F+ + EA+ + K+RE V P+K TFP
Sbjct: 55 PASSLSVFRRV---SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPS 111
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
++K CA G V+ + G +SD++VGN L++ Y R + AR+VFDEMP R
Sbjct: 112 VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
VSWNS+I+ + + + +E + +++ S PD ++ +L A L + G+ +H
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG 231
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ G+ + LV MY K AR VF+ M+ R+ ++++ MI G + EE
Sbjct: 232 FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEE 291
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG- 353
++ +F EN D +P+ +T VL AC H R++ I M+ G
Sbjct: 292 SVRMF---LENLDQFKPDLLTVSSVLRACGH----------LRDLSLAKYIYNYMLKAGF 338
Query: 354 --------AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
++D+Y + G + A + SM D + W +++S
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 3/226 (1%)
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
+++ PF+ + + S L E +++HA + GLDS + LI+ Y ++ + VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 168 DEM-PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL 226
+ P + WNS+I A +N + +E++ K+R S PD+ + ++ ACA L
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 227 SLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGL 286
+G V+ Q++ G +G ALVDMY + G L AR VF+ M R++++W+++I G
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY 182
Query: 287 AQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
+ HG+ EEAL ++ + + I P+ T VL A + +V +G
Sbjct: 183 SSHGYYEEALEIYHELKNSW--IVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 153/338 (45%), Gaps = 19/338 (5%)
Query: 60 THARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCC 119
T AR++ +S+N +I G+ + E++ +F + ++ KP+ LT +L+ C
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRAC 317
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
L K ++ +K G + V N LI+ Y +C ++ AR VF+ M + VSWN
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
S+I+ +++ L + ++ F M + D + ++++S L L G+ +H +
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ + + AL+DMY K G +G + +F M + +TW+ +I + G L +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG-------YRYFREMEYVHGIKPLMVHY 352
M ++ + P+ T+L L C+ G R+ E E G
Sbjct: 498 TQMRKSE--VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG-------- 547
Query: 353 GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
A++++Y + G L + + M D + W ++ A
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 223/404 (55%), Gaps = 8/404 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++++AR++ + + W +I G+ + S EA+ +F+KM+ +KPN +T +L
Sbjct: 292 DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLS 351
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C + L G+ VH ++K G+ D V N L++ Y +C + DA+ VF+ E+ V+
Sbjct: 352 GCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WNS+I+ +N + + + F +M P+ ++ + SACA LG L++G +H V
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 238 LRGMVLS--CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
G + S +GTAL+D Y K G ARL+F+ +E++N +TWSAMI G + G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
L LFE M + +PN T+ +L AC H GMV+EG +YF M + P HY M
Sbjct: 531 LELFEEMLKKQQ--KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
VD+ RAG L +A + I+ MP+ PD + L C +H D +G+ V K++L + P
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFD---LGEIVIKKMLDLHP 645
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVD 459
V+V+NLYA G W +A VR +M+ G+ K+AG S ++
Sbjct: 646 DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 188/391 (48%), Gaps = 16/391 (4%)
Query: 12 CLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS-A 70
C LL+ C +ID L Q +G + + ++LV SL T +LV
Sbjct: 47 CFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLV---SLYGFFGYTKDARLVFDQIP 103
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
P W +++R + + +E + ++ + + G + + + F LK C L GK+
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
Query: 131 VHADAVKF-GLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
+H VK D+ V G L++ Y +C +I A KVF+++ R V W S+I V+N
Sbjct: 164 IHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+G+ F +MR + +E + ++ AC +L L G+W H +V G+ LS L T
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+L+DMY K G + AR VF +++ W+AMI+G +G EALSLF+ M I
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE--I 339
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
+PN VT VL C ++ G R + GI V A+V +Y + R+A
Sbjct: 340 KPNCVTIASVLSGCGLIENLELG-RSVHGLSIKVGIWDTNVA-NALVHMYAKCYQNRDA- 396
Query: 370 EFIQSMPVNPDPIVWRTLLSAC----SVHDA 396
+++ M D + W +++S S+H+A
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 246/421 (58%), Gaps = 16/421 (3%)
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFR-KMRERGVKPNKLTFPFLLKCCAVGS 123
+LH T S + N ++ + S PI+A+ FR + R+ + + F +K +
Sbjct: 20 FLLHFHTKS-LKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQK 78
Query: 124 ALR-EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP-VSWNSV 181
A +G+Q+HA K G ++ + + +L+ FY + AR+VFDE PE+ V W ++
Sbjct: 79 ASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAM 138
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG- 240
I+A EN + +E F +M E D + + LSACA+LG + +G ++ + + R
Sbjct: 139 ISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKR 198
Query: 241 -MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
+ + L +L++MY KSG AR +F+ +++V T+++MI G A +G A+E+L LF
Sbjct: 199 RLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELF 258
Query: 300 EMM---SENHDN-IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
+ M ++ D I PN VT++GVL ACSH+G+V+EG R+F+ M + +KP H+G M
Sbjct: 259 KKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
VD++ R+G L++A+EFI MP+ P+ ++WRTLL ACS+ H +G++V++ + ++
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSL---HGNVELGEEVQRRIFELDR 375
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
G+ V ++N+YA GMW+ + +R +R ++M G+S ++LG + F +G D+
Sbjct: 376 DHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNND 432
Query: 476 D 476
+
Sbjct: 433 E 433
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 268/502 (53%), Gaps = 31/502 (6%)
Query: 1 MNTRSLSNKNQCL-SLLNLCRSI------DQLHQIQAQFHIHGHYHNTYLLSELVYVCSL 53
MN + + CL S L C + Q+H + + + H L ++ C +
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
+ ARK+ S +S N LI G++ ++ EA+ +F++M RGV P+++TF
Sbjct: 580 -----IKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFA 633
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSD-VYVGNNLINFYGRCKKILDARKVFDEMPE 172
+++ C +L G Q H K G S+ Y+G +L+ Y + + +A +F E+
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 173 -RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
++ V W +++ +N + + ++++ +MR G PD+ + V +L C+ L L GR
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR-NVLTWSAMILGLAQHG 290
+H + L L+DMY K G + + VF+ M +R NV++W+++I G A++G
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
+AE+AL +F+ M ++H I P+ +T+LGVL ACSHAG V +G + F M +GI+ +
Sbjct: 814 YAEDALKIFDSMRQSH--IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKE- 409
H MVD+ GR G L+EA +FI++ + PD +W +LL AC +H GD +R E
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIH--------GDDIRGEI 923
Query: 410 ----LLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMI 465
L+ +EP+ V+++N+YA G WE+A +R+VMRD G+KK+ G S +D+
Sbjct: 924 SAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTH 983
Query: 466 RFFAGYDSRPDLIPVYHLLDGL 487
F AG S ++ + L+ L
Sbjct: 984 IFAAGDKSHSEIGKIEMFLEDL 1005
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 165/319 (51%), Gaps = 3/319 (0%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
L AR L ++P ++WN++I G AI F MR+ VK + T +L
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
+ + L G VHA+A+K GL S++YVG++L++ Y +C+K+ A KVF+ + E+ V
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN++I N +E F+ M+ SG+ D+ + +LS CA L +G H ++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ + + +G ALVDMY K GAL AR +FERM R+ +TW+ +I Q EA
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
LF+ M N I + L AC+H + +G + + G+ + +++D
Sbjct: 516 LFKRM--NLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLID 572
Query: 358 IYGRAGLLREAYEFIQSMP 376
+Y + G++++A + S+P
Sbjct: 573 MYSKCGIIKDARKVFSSLP 591
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 219/501 (43%), Gaps = 76/501 (15%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
LS + + ++D + A+ G N Y+ S LV + S + + A K+
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM--YSKCEKMEAAAKVFEALEEK 391
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+ + WN +IRG+A + + + +F M+ G + TF LL CA L G Q H
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
+ +K L +++VGN L++ Y +C + DAR++F+ M +R V+WN++I + V++
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES 511
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
+ + F +M G D + L AC + L G+ VHC V G+ G++L+
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 571
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K G + AR VF + + +V++ +A+I G +Q+ EEA+ LF+ M + P+
Sbjct: 572 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTR--GVNPS 628
Query: 313 YVTYLGVLCACS-----------HAGMVDEGYRYFREMEYVHGIKPL------------- 348
+T+ ++ AC H + G+ E EY+ GI L
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFS--SEGEYL-GISLLGMYMNSRGMTEAC 685
Query: 349 -----------MVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSACSV- 393
+V + M+ + + G EA +F + M V PD + T+L CSV
Sbjct: 686 ALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVL 745
Query: 394 --------------HDAHDRTGI------------GDKVRKELLLVEPRRGGNLV---IV 424
H AHD + GD + E RR N+V +
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 425 ANLYAEAGMWERAANVRRVMR 445
N YA+ G E A + MR
Sbjct: 806 INGYAKNGYAEDALKIFDSMR 826
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 18/311 (5%)
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
ALR GK VH+ ++ G+DS+ +GN +++ Y +C ++ A K FD + E+ +WNS+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
+ F+ + + P++ + ++LS CA + GR +HC ++ G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE-MM 302
+ G ALVDMY K + AR VFE + N + W+ + G + G EEA+ +FE M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
E H RP+++ ++ V+ G + + F EM P +V + M+ +G+
Sbjct: 254 DEGH---RPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKR 305
Query: 363 GLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLV 422
G A E+ +M + TL S S IG +L LV L
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLS--------AIGIVANLDLGLVVHAEAIKLG 357
Query: 423 IVANLYAEAGM 433
+ +N+Y + +
Sbjct: 358 LASNIYVGSSL 368
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 163/381 (42%), Gaps = 70/381 (18%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
+WN ++ +++ P + + F + E + PNK TF +L CA + + G+Q+H
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
+K GL+ + Y G L++ Y +C +I DAR+VF+ + + V W + + V+ + V
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH---------------------- 233
F +MR G PD + V +++ LG L R +
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 234 CQVV------------------LRGMVLSCQLGTALVDM----YGKSGALGYARLVF--- 268
C+ V G VLS A +D+ + ++ LG A ++
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 269 ---------ERME----------KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
E+ME ++N + W+AMI G A +G + + + LF M + NI
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
T L CA SH ++ G ++ + K L V A+VD+Y + G L +A
Sbjct: 427 DDFTFTSLLSTCAASHD--LEMGSQFHSIIIKKKLAKNLFVG-NALVDMYAKCGALEDAR 483
Query: 370 EFIQSMPVNPDPIVWRTLLSA 390
+ + M + D + W T++ +
Sbjct: 484 QIFERM-CDRDNVTWNTIIGS 503
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 257/477 (53%), Gaps = 12/477 (2%)
Query: 20 RSIDQLHQIQAQFHIHGHYHNTYLLSELV---YVCSLSPSKNLTHARKLVLHSATPSPIS 76
+++ QI H + +L S L+ + C + ++ A+ + + +
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC-----RGVSMAQNIFSQCNSVDVVV 408
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
+ +I G+ + I+++ +FR + + + PN++T +L + AL+ G+++H +
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFII 468
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
K G D+ +G +I+ Y +C ++ A ++F+ + +R VSWNS+IT C ++ ++
Sbjct: 469 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 197 YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYG 256
F +M SG D S+ LSACA L S G+ +H ++ + + L+DMY
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 257 KSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTY 316
K G L A VF+ M+++N+++W+++I HG +++L LF M E IRP+ +T+
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK-SGIRPDQITF 647
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
L ++ +C H G VDEG R+FR M +GI+P HY +VD++GRAG L EAYE ++SMP
Sbjct: 648 LEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Query: 377 VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWER 436
PD VW TLL AC + H + + +L+ ++P G V+++N +A A WE
Sbjct: 708 FPPDAGVWGTLLGACRL---HKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 437 AANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKM 493
VR +M++ ++K+ G S +++ F +G + P+ +Y LL+ L L++
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 162/334 (48%), Gaps = 6/334 (1%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
A KL + ++WN +I G+ S E++ F +M GV P+ +TF LL +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
L KQ+H ++ + D+++ + LI+ Y +C+ + A+ +F + V + ++
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
I+ + N D +E F + P+E ++V +L L L LGR +H ++ +G
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
C +G A++DMY K G + A +FER+ KR++++W++MI AQ A+ +F
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGY-RYFREMEYVHGIKPLMVHYGAMVDIYG 360
M + I + V+ L AC A + E + + H + + ++D+Y
Sbjct: 533 MGVS--GICYDCVSISAALSAC--ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
+ G L+ A ++M + + W ++++AC H
Sbjct: 589 KCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 160/330 (48%), Gaps = 22/330 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ WN+++ G+A + I F MR + PN +TF +L CA + G Q+H
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGL 264
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
V G+D + + N+L++ Y +C + DA K+F M V+WN +I+ V++ + +
Sbjct: 265 VVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ +F +M SG PD + +L + ++ L + +HC ++ + L L +AL+D
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K + A+ +F + +V+ ++AMI G +G ++L +F + + I PN +
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV--KISPNEI 442
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG---------AMVDIYGRAGLL 365
T + +L + G RE+ HG ++ G A++D+Y + G +
Sbjct: 443 TLVSILPVIGILLALKLG----REL---HG---FIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
AYE + + D + W ++++ C+ D
Sbjct: 493 NLAYEIFERLS-KRDIVSWNSMITRCAQSD 521
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 166/371 (44%), Gaps = 26/371 (7%)
Query: 4 RSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHG-HYHNTYLLSELVYVCSLSPSKNLTHA 62
R LS Q S NL R Q+H I G Y + +L S S + +
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
L S P WN +I F + +A+ + KM GV P+ TFP L+K C
Sbjct: 96 LDLRRSSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-- 149
Query: 123 SALREGKQVH--ADAVK-FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
AL+ K + +D V G+D + +V ++LI Y KI K+FD + ++ V WN
Sbjct: 150 -ALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++ + L ++ F MR P+ + +LS CA + LG +H VV+
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ + +L+ MY K G A +F M + + +TW+ MI G Q G EE+L+ F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 300 -EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
EM+S + P+ +T+ +L + S F +EY I ++ + +DI
Sbjct: 329 YEMISS---GVLPDAITFSSLLPSVSK----------FENLEYCKQIHCYIMRHSISLDI 375
Query: 359 YGRAGLLREAY 369
+ + L+ +AY
Sbjct: 376 FLTSALI-DAY 385
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 233/426 (54%), Gaps = 16/426 (3%)
Query: 38 YHNTYLLSELVYVCSLSPSKNLTH----ARKLVLHSATPSPISWNILIRGFATSDSPIEA 93
Y N L S+LV S L H + + H + SWNI+I F+ S ++
Sbjct: 63 YSNVVLSSKLVLAYS-----KLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKS 117
Query: 94 IWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLIN 152
I +F +M RE V+P+ T P +L+ C+ + G +H +K G S ++V + L+
Sbjct: 118 IDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVI 177
Query: 153 FYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETS 212
Y K+L ARK+FD+MP R V + ++ V+ G+ F +M SGF D
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 213 MVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME 272
MV +L AC +LG L G+ VH + R L LG A+ DMY K L YA VF M
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 273 KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
+R+V++WS++ILG G + LF+ M + + I PN VT+LGVL AC+H G+V++
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLK--EGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 333 YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
+ YFR M+ + I P + HY ++ D RAGLL EA +F++ MPV PD V +LS C
Sbjct: 356 WLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCK 414
Query: 393 VHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKM 452
V + +G++V +EL+ ++PR+ V +A LY+ AG ++ A ++R+ M++ + K+
Sbjct: 415 V---YGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKV 471
Query: 453 AGESCV 458
G S +
Sbjct: 472 PGCSSI 477
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 239/445 (53%), Gaps = 13/445 (2%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNK 109
+ + S + AR+L S +W ++ G+ + EA +F KM ER N+
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NE 312
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE 169
+++ +L G + K++ D + +V N +I Y +C KI +A+ +FD+
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELF-DVMPC---RNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 170 MPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG 229
MP+R PVSW ++I ++ + + F++M G + +S LS CA++ L LG
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 230 RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH 289
+ +H ++V G C +G AL+ MY K G++ A +F+ M +++++W+ MI G ++H
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 290 GFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM 349
GF E AL FE M + ++P+ T + VL ACSH G+VD+G +YF M +G+ P
Sbjct: 489 GFGEVALRFFESMK--REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNS 546
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKE 409
HY MVD+ GRAGLL +A+ +++MP PD +W TLL A V H T + + +
Sbjct: 547 QHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV---HGNTELAETAADK 603
Query: 410 LLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
+ +EP G V+++NLYA +G W +R MRD G+KK+ G S +++ F
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Query: 470 GYDSRPDLIPVYHLLDGLNLHLKMA 494
G + P+ ++ L+ L+L +K A
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKA 688
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 188/483 (38%), Gaps = 124/483 (25%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGV---------------- 105
ARKL +SWN++I+G+ + + +A +F M ER V
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 106 -----------KPNKLTFPFLLKC--------------------------CAVGSALREG 128
+ N +++ LL C +G +++
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK 233
Query: 129 KQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
K V A ++ DV N +I Y + KI +AR++FDE P + +W ++++ ++
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ- 246
N + + E F KM E +E S ML+ GY+ R + + V+ C+
Sbjct: 294 NRMVEEARELFDKMP----ERNEVSWNAMLA-----GYVQGERMEMAKELFD--VMPCRN 342
Query: 247 --LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
++ Y + G + A+ +F++M KR+ ++W+AMI G +Q G + EAL LF M
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME- 401
Query: 305 NHDNIRPNYVTYLGVLCACS-----------HAGMVDEGYRY------------------ 335
+ R N ++ L C+ H +V GY
Sbjct: 402 -REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 336 ------FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRT 386
F+EM +V + M+ Y R G A F +SM + PD
Sbjct: 461 EEANDLFKEM-----AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 387 LLSACSVHDAHDRTGIGDKVRKELLLVEPRRG-----GNLVIVANLYAEAGMWERAANVR 441
+LSACS TG+ DK R+ + G + + +L AG+ E A N+
Sbjct: 516 VLSACS------HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 442 RVM 444
+ M
Sbjct: 570 KNM 572
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 51/250 (20%)
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
DSD+ N I+ Y R + +A +VF MP + VS+N +I+ + N
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN------------ 108
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGA 260
G L R + ++ R +V ++ Y ++
Sbjct: 109 -----------------------GEFELARKLFDEMPERDLV----SWNVMIKGYVRNRN 141
Query: 261 LGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
LG AR +FE M +R+V +W+ M+ G AQ+G ++A S+F+ M E +D V++ +L
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND------VSWNALL 195
Query: 321 CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPD 380
A ++E F+ E +V + ++ + + + EA +F SM V D
Sbjct: 196 SAYVQNSKMEEACMLFKSRE-----NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-D 249
Query: 381 PIVWRTLLSA 390
+ W T+++
Sbjct: 250 VVSWNTIITG 259
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/517 (30%), Positives = 266/517 (51%), Gaps = 44/517 (8%)
Query: 10 NQCLS-LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLH 68
NQ +S +++ R ++ L Q+Q+ + G H+ +L +L+ C+L NL++AR +
Sbjct: 24 NQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLC-NLSYARFIFDR 82
Query: 69 SATPSPISWNILIRGFATSDSPI---EAIWVFRKMRERGV-KPNKLTFPFLLKCCAVGSA 124
+ P+ + ++ +++S P+ A FR M R V +PN +P +LK S+
Sbjct: 83 FSFPNTHLYAAVLTAYSSS-LPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSS 141
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYG----------------------------- 155
VH K G V V L++ Y
Sbjct: 142 AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLS 201
Query: 156 ---RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKM-RGSGFEPDET 211
R I +A +F++MPER SWN+++ AC +N + V F +M P+E
Sbjct: 202 GYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEV 261
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
++V +LSACA+ G L L + +H R + + +LVD+YGK G L A VF+
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 272 EKRNVLTWSAMILGLAQHGFAEEALSLFE-MMSENHDNIRPNYVTYLGVLCACSHAGMVD 330
K+++ W++MI A HG +EEA+++FE MM N ++I+P+++T++G+L AC+H G+V
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 381
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+G YF M GI+P + HYG ++D+ GRAG EA E + +M + D +W +LL+A
Sbjct: 382 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Query: 391 CSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMK 450
C +H D + + K L+ + P GG + ++ANLY E G WE A R++++
Sbjct: 442 CKIHGHLD---LAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAY 498
Query: 451 KMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
K G S +++ + +F++ S P+ +Y +LD L
Sbjct: 499 KPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 240/460 (52%), Gaps = 4/460 (0%)
Query: 34 IHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEA 93
++G +S + + + +L +ARK+ +WN +I G + E
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75
Query: 94 IWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINF 153
+ +FR+M G P++ T + A ++ G+Q+H +K+GL+ D+ V ++L +
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 135
Query: 154 YGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSM 213
Y R K+ D V MP R V+WN++I +N + + M+ SG P++ +
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195
Query: 214 VLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK 273
V +LS+C++L G+ +H + + G + ++L+ MY K G LG A F E
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255
Query: 274 RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
+ + WS+MI HG +EA+ LF M+E N+ N V +L +L ACSH+G+ D+G
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAE-QTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSV 393
F M +G KP + HY +VD+ GRAG L +A I+SMP+ D ++W+TLLSAC++
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 394 HDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMA 453
H + + +V KE+L ++P V++AN++A A W + VR+ MRD +KK A
Sbjct: 375 HKNAE---MAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 431
Query: 454 GESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKM 493
G S + G + +F G S+ +Y L L L +K+
Sbjct: 432 GISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKL 471
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 236/447 (52%), Gaps = 9/447 (2%)
Query: 16 LNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSAT 71
++C + L + +HG+ + L+ +L SL S +L + KL
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
W +I GF EAI +F +M + G P++ T +L C+ +L GK++
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H ++ G+D + +G+ L+N Y +C + AR+V+D +PE PVS +S+I+ ++ +
Sbjct: 574 HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLI 633
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+DG F M SGF D ++ +L A A SLG VH + G+ +G++L
Sbjct: 634 QDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSL 693
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+ MY K G++ F ++ +++ W+A+I AQHG A EAL ++ +M E +P
Sbjct: 694 LTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK--GFKP 751
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
+ VT++GVL ACSH G+V+E Y + M +GI+P HY MVD GR+G LREA F
Sbjct: 752 DKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESF 811
Query: 372 IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEA 431
I +M + PD +VW TLL+AC + H +G K+ + +EP G + ++N+ AE
Sbjct: 812 INNMHIKPDALVWGTLLAACKI---HGEVELGKVAAKKAIELEPSDAGAYISLSNILAEV 868
Query: 432 GMWERAANVRRVMRDGGMKKMAGESCV 458
G W+ R++M+ G++K G S V
Sbjct: 869 GEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 198/454 (43%), Gaps = 38/454 (8%)
Query: 56 SKNL--THARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
SKNL A K+ S + + WN +I G + + +F +M KP+ T+
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
+L CA LR GK V A +K G + DV+V +++ Y +C + +A +VF +P
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNP 314
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
+ VSW +++ ++ +E F +MR SG E + ++ ++SAC + VH
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM---EKRNVLTWSAMILGLAQHG 290
V G L + AL+ MY KSG + + VFE + +++N++ + MI +Q
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSK 432
Query: 291 FAEEALSLF-EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM 349
+A+ LF M+ E + + L VL C + G GY G+ +
Sbjct: 433 KPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-DCLNLGKQVHGYT------LKSGLVLDL 485
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKE 409
++ +Y + G L E+Y+ Q +P D W +++S + + + R IG
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEY-GYLREAIG------ 537
Query: 410 LLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAG-ESCVDLGGSMIRFF 468
L E G + L A + ++ R G AG + +DLG +++ +
Sbjct: 538 -LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 469 AG----------YDSRPDLIPV--YHLLDGLNLH 490
+ YD P+L PV L+ G + H
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH 630
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 12/306 (3%)
Query: 34 IHGHYHNTYLLSELVYVCS-----LSPSKNLTHARKLVLHSATPSPISWNILIRGFATSD 88
+ H YLL V++ S S ++ A KL P +S NI+I G+
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 89 SPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGN 148
E++ F KM G + N++++ ++ C+ A + V +K G V +
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 149 NLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEP 208
LI+ + + + DA KVF + WN++I + N + F +M +P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLRGM--VLSCQLGTALVDMYGKSGALGYARL 266
D + +L+ACA L L G+ V +V+ G V C TA+VD+Y K G + A
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC---TAIVDLYAKCGHMAEAME 306
Query: 267 VFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHA 326
VF R+ +V++W+ M+ G + A AL +F+ M H + N T V+ AC
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM--RHSGVEINNCTVTSVISACGRP 364
Query: 327 GMVDEG 332
MV E
Sbjct: 365 SMVCEA 370
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 6/266 (2%)
Query: 125 LREGKQVHADAVK-FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
LR K + A ++ + L DV++ +L+++Y + DA K+FD +P+ VS N +I+
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
++ + + +F KM GFE +E S ++SAC+ L V C + G
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+ +AL+D++ K+ A VF NV W+ +I G ++ LF M
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
+P+ TY VL AC+ + G + + G + + V A+VD+Y + G
Sbjct: 244 VGFQ--KPDSYTYSSVLAACASLEKLRFG-KVVQARVIKCGAEDVFV-CTAIVDLYAKCG 299
Query: 364 LLREAYEFIQSMPVNPDPIVWRTLLS 389
+ EA E +P NP + W +LS
Sbjct: 300 HMAEAMEVFSRIP-NPSVVSWTVMLS 324
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 233/421 (55%), Gaps = 7/421 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
ISWN +I+ + ++ P+ AI +F++MR ++P+ LT L + +R + V
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 135 AVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
++ G D+ +GN ++ Y + + AR VF+ +P +SWN++I+ +N + +
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 433
Query: 194 GVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
+E + M G ++ + V +L AC++ G L G +H +++ G+ L + T+L
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA 493
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMYGK G L A +F ++ + N + W+ +I HG E+A+ LF+ M + + ++P+
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD--EGVKPD 551
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
++T++ +L ACSH+G+VDEG F M+ +GI P + HYG MVD+YGRAG L A +FI
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 611
Query: 373 QSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAG 432
+SM + PD +W LLSAC VH D +G + L VEP G V+++N+YA AG
Sbjct: 612 KSMSLQPDASIWGALLSACRVHGNVD---LGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 433 MWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
WE +R + G++K G S +++ + F+ G + P +Y L L LK
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 493 M 493
M
Sbjct: 729 M 729
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 197/386 (51%), Gaps = 18/386 (4%)
Query: 14 SLLNLCRSI---DQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
S+L CR++ +++H + +F G + Y+ + L+++ S K + +AR L
Sbjct: 158 SVLKACRTVIDGNKIHCLALKF---GFMWDVYVAASLIHL--YSRYKAVGNARILFDEMP 212
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
SWN +I G+ S + EA+ + +R + +T LL C G
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 268
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H+ ++K GL+S+++V N LI+ Y ++ D +KVFD M R +SWNS+I A N
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL-SCQLGT 249
+ F +MR S +PD +++ + S ++LG + R V + +G L +G
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
A+V MY K G + AR VF + +V++W+ +I G AQ+GFA EA+ ++ +M E + I
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE-I 447
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
N T++ VL ACS AG + +G + + +G+ + ++ D+YG+ G L +A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 370 EFIQSMP-VNPDPIVWRTLLSACSVH 394
+P VN P W TL++ H
Sbjct: 507 SLFYQIPRVNSVP--WNTLIACHGFH 530
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 183/380 (48%), Gaps = 17/380 (4%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYV-CSLSPSKNLTHARKLVLHSATP 72
+L C ++ + A+ + N + ++LV + C L N+ AR H
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG---NVALARHTFDHIQNR 115
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRK-MRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
+WN++I G+ + + E I F M G+ P+ TFP +LK C + +G ++
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H A+KFG DVYV +LI+ Y R K + +AR +FDEMP R SWN++I+ ++
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
++ + +R D ++V +LSAC E G + G +H + G+ + L
Sbjct: 233 KEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+D+Y + G L + VF+RM R++++W+++I + A+SLF+ M + I+P
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR--IQP 346
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG-AMVDIYGRAGLLREAYE 370
+ +T + + S G + R + G + G A+V +Y + GL+ A
Sbjct: 347 DCLTLISLASILSQLGDI-RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 371 FIQSMPVNPDPIVWRTLLSA 390
+P N D I W T++S
Sbjct: 406 VFNWLP-NTDVISWNTIISG 424
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 24/314 (7%)
Query: 80 LIRGFATSDSPIEAIWVFRKMRERGVKPNKLT-FPFLLKCCAVGSALREGKQVHADAVKF 138
+IR F+ S + ++ W + G + ++ L + C + L+ K +HA V
Sbjct: 30 VIREFSASANALQDCW------KNGNESKEIDDVHTLFRYC---TNLQSAKCLHARLVVS 80
Query: 139 GLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYF 198
+V + L+N Y + AR FD + R +WN +I+ + + F
Sbjct: 81 KQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCF 140
Query: 199 -LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK 257
L M SG PD + +L AC + G +HC + G + + +L+ +Y +
Sbjct: 141 SLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 197
Query: 258 SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP-NYVTY 316
A+G AR++F+ M R++ +W+AMI G Q G A+EAL+L + +R + VT
Sbjct: 198 YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-------SNGLRAMDSVTV 250
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
+ +L AC+ AG + G HG++ + ++D+Y G LR+ + M
Sbjct: 251 VSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309
Query: 377 VNPDPIVWRTLLSA 390
V D I W +++ A
Sbjct: 310 VR-DLISWNSIIKA 322
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 247/492 (50%), Gaps = 12/492 (2%)
Query: 2 NTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTH 61
++ +LSN C S+L L +H + I L L C P L
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRER--GVKPNKLTFPFLLKCC 119
++W LI G + EA+ VF M++ +KP+ + C
Sbjct: 432 KSM-----EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
A ALR G QVH +K GL +V+VG++LI+ Y +C A KVF M V+WN
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
S+I+ N ++ F M G PD S+ +L A + L G+ +H +
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ L AL+DMY K G YA +F++M+ ++++TW+ MI G HG ALSLF
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLF 666
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
+ M + ++ P+ VT+L ++ AC+H+G V+EG F M+ +GI+P M HY MVD+
Sbjct: 667 DEMKKAGES--PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
GRAGLL EAY FI++MP+ D +W LLSA H +G ++LL +EP RG
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRT---HHNVELGILSAEKLLRMEPERGS 781
Query: 420 NLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIP 479
V + NLY EAG+ AA + +M++ G+ K G S +++ FF+G S P
Sbjct: 782 TYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAE 841
Query: 480 VYHLLDGLNLHL 491
++++L+ L ++
Sbjct: 842 IFNVLNRLKSNM 853
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 168/322 (52%), Gaps = 14/322 (4%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
WN++I GF S ++ ++ + VK +F L C+ G+Q+H D V
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
K GL +D YV +L++ Y +C + +A VF + ++ WN+++ A EN + ++
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 197 YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYG 256
F MR PD ++ ++S C+ LG + G+ VH ++ R + + + +AL+ +Y
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 257 KSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTY 316
K G A LVF+ ME+++++ W ++I GL ++G +EAL +F M ++ D+++P+
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHG--IKP---LMVHYG-AMVDIYGRAGLLREAYE 370
V AC AG+ E R+ + VHG IK L V G +++D+Y + GL A +
Sbjct: 480 TSVTNAC--AGL--EALRFGLQ---VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 371 FIQSMPVNPDPIVWRTLLSACS 392
SM + + W +++S S
Sbjct: 533 VFTSMSTE-NMVAWNSMISCYS 553
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 164/341 (48%), Gaps = 29/341 (8%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP---NKLTFPFLLKCCAVGSALREGK 129
SP S N IR ++A+ ++ K G P + TFP LLK C+ + L GK
Sbjct: 23 SPASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE-------RTPVSWNSVI 182
+H V G D ++ +L+N Y +C + A +VFD + R WNS+I
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL--SLGRWVHCQVVLRG 240
+ ++GV F +M G PD S+ +++S + G G+ +H ++
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 241 MVLSCQLGTALVDMYGKSG-ALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
+ L TAL+DMY K G ++ R+ E +K NV+ W+ MI+G G E +L L+
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG-----A 354
M+++N ++++ ++ G L ACS + E + R++ + + +H +
Sbjct: 261 -MLAKN-NSVKLVSTSFTGALGACSQS----ENSGFGRQIHC--DVVKMGLHNDPYVCTS 312
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
++ +Y + G++ EA E + S V+ +W +++A + +D
Sbjct: 313 LLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAAYAEND 352
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 240/450 (53%), Gaps = 15/450 (3%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHY---HNTYLLSELVYVCSLSPSKNLTH 61
SL+ SLL C S+ + H+ Y +N + S+LV + + + H
Sbjct: 88 SLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAH 147
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
+ SP +WN LI G+A +A+ ++ +M E GVKP++ TFP +LK C
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
+++ G+ +H D VK G DVYV N L+ Y +C I+ AR VFD +P + VSWNS+
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+T + + L + ++ F M +G EPD+ ++ +L+ + GR +H V+ RGM
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGM 324
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ AL+ +Y K G LG A +F++M +R+ ++W+A+I + H L FE
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQ 381
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
M + N +P+ +T++ VL C++ GMV++G R F M +GI P M HY MV++YGR
Sbjct: 382 M--HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 362 AGLLREAYEFI-QSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGN 420
AG++ EAY I Q M + P VW LL AC + H T IG+ + L +EP N
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYL---HGNTDIGEVAAQRLFELEPDNEHN 496
Query: 421 LVIVANLYAEAGMWERAANVRRVMRDGGMK 450
++ +Y++A E VR++M D G++
Sbjct: 497 FELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 223/423 (52%), Gaps = 19/423 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
++W+ I G+A EA+ V R+M G+KPN++T +L CA AL GK++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 135 AVKFGLD-------SDVYVGNNLINFYGRCKKILDARKVFDEMP--ERTPVSWNSVITAC 185
A+K+ +D + V N LI+ Y +CKK+ AR +FD + ER V+W +I
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 186 VENLWLRDGVEYFLKM--RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
++ +E +M P+ ++ L ACA L L +G+ +H LR
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH-AYALRNQQN 509
Query: 244 SCQL--GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ L L+DMY K G++ ARLVF+ M +N +TW++++ G HG+ EEAL +F+
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
M + + VT L VL ACSH+GM+D+G YF M+ V G+ P HY +VD+ GR
Sbjct: 570 M--RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGR 627
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
AG L A I+ MP+ P P+VW LS C + H + +G+ +++ + G+
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI---HGKVELGEYAAEKITELASNHDGSY 684
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY 481
+++NLYA AG W+ +R +MR G+KK G S V+ FF G + P +Y
Sbjct: 685 TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIY 744
Query: 482 HLL 484
+L
Sbjct: 745 QVL 747
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 201/429 (46%), Gaps = 58/429 (13%)
Query: 15 LLNLCRSIDQ---LHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSAT 71
++ C++I Q +HQ F I ++L+S + V LS HA L L
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLS------HAVSL-LRRFP 86
Query: 72 PSPIS---WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG 128
PS WN LIR + + + +++F M P+ TFPF+ K C S++R G
Sbjct: 87 PSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG 146
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN 188
+ HA ++ G S+V+VGN L+ Y RC+ + DARKVFDEM VSWNS+I + +
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 189 LWLRDGVEYFLKMRGS-GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ +E F +M G PD ++V +L CA LG SLG+ +HC V M+ + +
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH- 306
G LVDMY K G + A VF M ++V++W+AM+ G +Q G E+A+ LFE M E
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 307 --------------------------------DNIRPNYVTYLGVLCACSHAGMVDEGYR 334
I+PN VT + VL C+ G + G
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 335 -YFREMEYV-------HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM-PVNPDPIVWR 385
+ ++Y HG + ++++ ++D+Y + + A S+ P D + W
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVIN--QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 386 TLLSACSVH 394
++ S H
Sbjct: 445 VMIGGYSQH 453
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 223/414 (53%), Gaps = 13/414 (3%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
WN L+ G++ +A+ VF KMRE GV ++ T +L V + G+ +H AV
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW-LRDG- 194
K G SD+ V N LI+ YG+ K + +A +F+ M ER +WNSV+ CV + DG
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL--CVHDYCGDHDGT 347
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ----LGTA 250
+ F +M SG PD ++ +L C L L GR +H +++ G++ + +
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+DMY K G L AR+VF+ M ++ +W+ MI G E AL +F M ++
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRA--GVK 465
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
P+ +T++G+L ACSH+G ++EG + +ME V+ I P HY ++D+ GRA L EAYE
Sbjct: 466 PDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYE 525
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAE 430
S P+ +P+VWR++LS+C +H D + K EL EP G V+++N+Y E
Sbjct: 526 LAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHEL---EPEHCGGYVLMSNVYVE 582
Query: 431 AGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLL 484
AG +E +VR MR +KK G S + L + FF G + P+ ++ L
Sbjct: 583 AGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 170/338 (50%), Gaps = 16/338 (4%)
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
LV + +N LI GF + SP++A+ +R+MR G+ P+K TFP LLK +
Sbjct: 117 LVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAME 175
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER-TPVSWNSVIT 183
L + K+VH A K G DSD YVG+ L+ Y + + DA+KVFDE+P+R V WN+++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
+ D + F KMR G ++ +LSA G + GR +H V G
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+ AL+DMYGKS L A +FE M++R++ TW++++ G + L+LFE M
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH-------YGAMV 356
+ IRP+ VT VL C + +G RE+ + L+ + +++
Sbjct: 356 CS--GIRPDIVTLTTVLPTCGRLASLRQG----REIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
D+Y + G LR+A SM V D W +++ V
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVK-DSASWNIMINGYGVQ 446
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 11/286 (3%)
Query: 116 LKCCAVGSALREGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
L+ CA G+Q+H V+ G LD G +L+N Y +C + A VF ER
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
+N++I+ V N D +E + +MR +G PD+ + +L + LS + VH
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHG 184
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR-NVLTWSAMILGLAQHGFAE 293
G C +G+ LV Y K ++ A+ VF+ + R + + W+A++ G +Q E
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
+AL +F M E + + +T VL A + +G +D G R + G +V
Sbjct: 245 DALLVFSKMREEGVGVSRHTIT--SVLSAFTVSGDIDNG-RSIHGLAVKTGSGSDIVVSN 301
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA---CSVHDA 396
A++D+YG++ L EA ++M D W ++L C HD
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDG 346
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+L AR + SWNI+I G+ A+ +F M GVKP+++TF LL+
Sbjct: 417 DLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQ 476
Query: 118 CCAVGSALREGKQVHAD---AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE-R 173
C+ L EG+ A SD Y +I+ GR K+ +A ++ P
Sbjct: 477 ACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC--VIDMLGRADKLEEAYELAISKPICD 534
Query: 174 TPVSWNSVITAC 185
PV W S++++C
Sbjct: 535 NPVVWRSILSSC 546
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 214 VLMLSACAELGYLSLGRWVHCQVVLRGMVL-SCQLGTALVDMYGKSGALGYARLVFERME 272
+ L CA+ G+ +H +V +G + S + GT+LV+MY K G + A LVF E
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE 123
Query: 273 KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
R+V ++A+I G +G +A+ + M N I P+ T+ +L + D
Sbjct: 124 -RDVFGYNALISGFVVNGSPLDAMETYREMRAN--GILPDKYTFPSLLKGSDAMELSD-- 178
Query: 333 YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL---------LREAYEFIQSMPVNPDPIV 383
++ VHG L G D Y +GL + +A + +P D ++
Sbjct: 179 ------VKKVHG---LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVL 229
Query: 384 WRTLLSACS-VHDAHDRTGIGDKVRKE 409
W L++ S + D + K+R+E
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREE 256
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 241/470 (51%), Gaps = 39/470 (8%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
NL +ARKL H +N LI+ + P E+I ++ + G++P+ TF F+
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE-------- 169
A S+ R + +H+ + G +SD + LI Y + + AR+VFDE
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 170 -----------------------MPERTPVSWNSVITACVENLWLRDGVEYFLKM-RGSG 205
MP + SW +VI+ +N + ++ FL M +
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
+P+ ++V +L ACA LG L +GR + G + + A ++MY K G + A+
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 266 LVFERM-EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACS 324
+FE + +RN+ +W++MI LA HG +EAL+LF M + +P+ VT++G+L AC
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE--KPDAVTFVGLLLACV 328
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVW 384
H GMV +G F+ ME VH I P + HYG M+D+ GR G L+EAY+ I++MP+ PD +VW
Sbjct: 329 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 385 RTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVM 444
TLL ACS H I + + L +EP GN VI++N+YA W+ +R++M
Sbjct: 389 GTLLGACSF---HGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLM 445
Query: 445 RDGGMKKMAGES-CVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKM 493
+ M K AG S V++G + +F S P +Y +L+ + +K+
Sbjct: 446 KKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 247/433 (57%), Gaps = 9/433 (2%)
Query: 42 YLLSELV---YVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFR 98
++ +ELV +V S + +L++A+++ + + SWN LI G A S+ P ++
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 99 KMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK 158
+M+ G+ P+ T LL C+ +LR GK+VH ++ L+ D++V ++++ Y C
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 159 KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLS 218
++ + +FD M +++ VSWN+VIT ++N + + F +M G + SM+ +
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 219 ACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLT 278
AC+ L L LGR H + + + +L+DMY K+G++ + VF +++++ +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 279 WSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFRE 338
W+AMI+G HG A+EA+ LFE M N P+ +T+LGVL AC+H+G++ EG RY +
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHN--PDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 339 MEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI-QSMPVNPDPIVWRTLLSACSVHDAH 397
M+ G+KP + HY ++D+ GRAG L +A + + M D +W++LLS+C +H
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783
Query: 398 DRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESC 457
+ +G+KV +L +EP + N V+++NLYA G WE VR+ M + ++K AG S
Sbjct: 784 E---MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 840
Query: 458 VDLGGSMIRFFAG 470
++L + F G
Sbjct: 841 IELNRKVFSFVVG 853
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 158/325 (48%), Gaps = 19/325 (5%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
WN +I ++ ++ E + F +M + P+ T+P ++K CA S + G VH
Sbjct: 152 FQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG 211
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
VK GL DV+VGN L++FYG + DA ++FD MPER VSWNS+I +N + +
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 194 GVEYFLKM---RGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+M G G F PD ++V +L CA + LG+ VH V + L
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNN 331
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
AL+DMY K G + A+++F+ +NV++W+ M+ G + G + M +++
Sbjct: 332 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 310 RPNYVTYLGVLCACSHAGM---VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+ + VT L + C H + E + Y + E+V+ L+ + A V Y + G L
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY--NELVAN--AFVASYAKCGSLS 447
Query: 367 EA---YEFIQSMPVNPDPIVWRTLL 388
A + I+S VN W L+
Sbjct: 448 YAQRVFHGIRSKTVNS----WNALI 468
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 140 LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFL 199
L +D + +I Y C D+R VFD + + WN+VI++ N + +E F+
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 200 KM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKS 258
+M + PD + ++ ACA + + +G VH VV G+V +G ALV YG
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 259 GALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDN-IRPNYVTY 316
G + A +F+ M +RN+++W++MI + +GF+EE+ L EMM EN D P+ T
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHG------IKPLMVHYGAMVDIYGRAGLLREAYE 370
+ VL C+ + G + VHG + +V A++D+Y + G + A +
Sbjct: 296 VTVLPVCAREREIGLG-------KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-Q 347
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIV 424
I M N + + W T++ S D G D +R+ L E + + I+
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEG--DTHGTFDVLRQMLAGGEDVKADEVTIL 399
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 178/397 (44%), Gaps = 39/397 (9%)
Query: 34 IHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDS 89
+HG L ELV +L S +T+A+ + + + +SWN ++ GF+
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 90 PIEAIWVFRKMRERG--VKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVG 147
V R+M G VK +++T + C S L K++H ++K + V
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 148 NNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
N + Y +C + A++VF + +T SWN++I ++ R ++ L+M+ SG
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
PD ++ +LSAC++L L LG+ VH ++ + + +++ +Y G L + +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMM------------------------- 302
F+ ME +++++W+ +I G Q+GF + AL +F M
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 303 ---SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIK-PLMVHYGAMVDI 358
E H ++ ACS M + + + +G+K + AM+
Sbjct: 614 RLGREAH-AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 359 YGRAGLLREA---YEFIQSMPVNPDPIVWRTLLSACS 392
YG GL +EA +E +Q NPD + + +L+AC+
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 24/329 (7%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRER----GVKPNKLTFPFLLKCCAVGSALREGKQ 130
+SWN +IR F+ + E+ + +M E P+ T +L CA + GK
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
VH AVK LD ++ + N L++ Y +C I +A+ +F + VSWN+++
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 191 LRDGVEYFLKMRGSG--FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+ +M G + DE +++ + C +L + +HC + + V + +
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
A V Y K G+L YA+ VF + + V +W+A+I G AQ + LSL +
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN--DPRLSLDAHLQMKISG 491
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI-------KPLMVHYGAMVDIYGR 361
+ P+ T +L ACS + R + VHG + L V Y +++ +Y
Sbjct: 492 LLPDSFTVCSLLSACSK-------LKSLRLGKEVHGFIIRNWLERDLFV-YLSVLSLYIH 543
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
G L +M + + W T+++
Sbjct: 544 CGELCTVQALFDAME-DKSLVSWNTVITG 571
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 26/190 (13%)
Query: 215 LMLSACAELGYLSLGRWVHCQVV-----LRGMVLSCQLGTALVDMYGKSGALGYARLVFE 269
L+L A + + +GR +H Q+V LR + C T ++ MY G+ +R VF+
Sbjct: 89 LLLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLC---TRIITMYAMCGSPDDSRFVFD 144
Query: 270 RMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLCACSHAGM 328
+ +N+ W+A+I +++ +E L F EM+S ++ P++ TY V+ AC AGM
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT--DLLPDHFTYPCVIKAC--AGM 200
Query: 329 VDEGYRYFREMEYVHG--IKPLMVHY----GAMVDIYGRAGLLREAYEFIQSMPVNPDPI 382
D G VHG +K +V A+V YG G + +A + MP + +
Sbjct: 201 SDVGIGL-----AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLV 254
Query: 383 VWRTLLSACS 392
W +++ S
Sbjct: 255 SWNSMIRVFS 264
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 216/388 (55%), Gaps = 9/388 (2%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P WN ++R + +SP++AI V+ M V P++ + P ++K GK++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H+ AV+ G D + + I Y + + +ARKVFDE PER SWN++I
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV---LSCQLG 248
+ VE F+ M+ SG EPD+ +MV + ++C LG LSL +H + VL+ +
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLH-KCVLQAKTEEKSDIMML 258
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
+L+DMYGK G + A +FE M +RNV++WS+MI+G A +G EAL F M E
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF--G 316
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+RPN +T++GVL AC H G+V+EG YF M+ ++P + HYG +VD+ R G L+EA
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 369 YEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLY 428
+ ++ MP+ P+ +VW L+ C + + + V ++ +EP G V++AN+Y
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGC---EKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVY 433
Query: 429 AEAGMWERAANVRRVMRDGGMKKMAGES 456
A GMW+ VR++M+ + K+ S
Sbjct: 434 ALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 226/422 (53%), Gaps = 5/422 (1%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S ++L A K+ S + I+W+ ++ G++ + +EA+ +F +M G+KP++ T
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
+L C+ L EGKQ+H+ +K G + ++ L++ Y + + DARK FD + ER
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
W S+I+ V+N + + + +M+ +G P++ +M +L AC+ L L LG+ VH
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
+ G L +G+AL MY K G+L LVF R ++V++W+AMI GL+ +G +
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
EAL LFE M + + P+ VT++ ++ ACSH G V+ G+ YF M G+ P + HY
Sbjct: 507 EALELFEEMLA--EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLV 413
MVD+ RAG L+EA EFI+S ++ +WR LLSAC H + +G ++L+ +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACK---NHGKCELGVYAGEKLMAL 621
Query: 414 EPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDS 473
R V ++ +Y G V + MR G+ K G S ++L F G
Sbjct: 622 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTM 681
Query: 474 RP 475
P
Sbjct: 682 HP 683
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 11/322 (3%)
Query: 75 ISWNILIRGFATS---DSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
+SWN LI G++ + S + +FR+MR + + PN T + K + + G+Q
Sbjct: 81 VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA 140
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
HA VK D+YV +L+ Y + + D KVF MPER +W+++++ +
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 192 RDGVEY---FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+ ++ FL+ + G + D +LS+ A Y+ LGR +HC + G++ L
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS 259
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
ALV MY K +L A +F+ RN +TWSAM+ G +Q+G + EA+ LF M
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA--G 317
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
I+P+ T +GVL ACS ++EG + G + + A+VD+Y +AG L +A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 369 YEFIQSMPVNPDPIVWRTLLSA 390
+ + D +W +L+S
Sbjct: 377 RKGFDCLQ-ERDVALWTSLISG 397
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 163/320 (50%), Gaps = 8/320 (2%)
Query: 76 SWNILIRGFATSDSPIEAIWVFR---KMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+W+ ++ G+AT EAI VF + +E G + + F +L A + G+Q+H
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIH 244
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
+K GL V + N L+ Y +C+ + +A K+FD +R ++W++++T +N
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
+ V+ F +M +G +P E ++V +L+AC+++ YL G+ +H ++ G TALV
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K+G L AR F+ +++R+V W+++I G Q+ EEAL L+ M I PN
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTA--GIIPN 422
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
T VL ACS ++ G + HG + A+ +Y + G L +
Sbjct: 423 DPTMASVLKACSSLATLELG-KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 373 QSMPVNPDPIVWRTLLSACS 392
+ P N D + W ++S S
Sbjct: 482 RRTP-NKDVVSWNAMISGLS 500
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 7/272 (2%)
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
L G+ VH ++ G + + N L+NFY +C K+ A +F+ + + VSWNS+IT
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 185 CVENLWLRDG---VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+N + ++ F +MR P+ ++ + A + L ++GR H VV
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ T+LV MY K+G + VF M +RN TWS M+ G A G EEA+ +F +
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 302 -MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
+ E + +YV + VL + + V G R + +G+ + A+V +Y
Sbjct: 210 FLREKEEGSDSDYV-FTAVLSSLAATIYVGLG-RQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
+ L EA + S + + I W +++ S
Sbjct: 268 KCESLNEACKMFDSSG-DRNSITWSAMVTGYS 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
P ++++ L+ ++ L GR VH Q++ G Q LV+ Y K G L A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE-NHDNIRPNYVTYLGVLCACSHA 326
F + ++V++W+++I G +Q+G + ++ ++ E +I PN T G+ A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 327 GMVDEGYRYFREMEYVHGIKPLMVHYG------AMVDIYGRAGLLREAYEFIQSMPVNPD 380
G + H + M +G ++V +Y +AGL+ + + MP +
Sbjct: 132 QSSTVGRQ-------AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 381 PIVWRTLLSA 390
W T++S
Sbjct: 184 TYTWSTMVSG 193
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 232/449 (51%), Gaps = 37/449 (8%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+++N +I G+ EA+ + R+M G++ ++ T+P +++ CA L+ GKQVHA
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV-------- 186
++ D + N+L++ Y +C K +AR +F++MP + VSWN++++ V
Sbjct: 312 VLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 187 -----------------------ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
EN + +G++ F M+ GFEP + + + +CA L
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 224 GYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMI 283
G G+ H Q++ G S G AL+ MY K G + AR VF M + ++W+A+I
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH 343
L QHG EA+ ++E M + IRP+ +T L VL ACSHAG+VD+G +YF ME V+
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKK--GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVY 548
Query: 344 GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
I P HY ++D+ R+G +A I+S+P P +W LLS C VH + +G
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME---LG 605
Query: 404 DKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGS 463
+L + P G ++++N++A G WE A VR++MRD G+KK S +++
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Query: 464 MIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
+ F S P+ VY L L ++
Sbjct: 666 VHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 174/388 (44%), Gaps = 73/388 (18%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA-VGSALREGKQVHA 133
+ +N +I GF+ ++ AI +F KM+ G KP+ TF +L A V ++ Q HA
Sbjct: 114 VMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHA 173
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKK----ILDARKVFDEMPERTPVSWNSVITACVENL 189
A+K G V N L++ Y +C + ARKVFDE+ E+ SW +++T V+N
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Query: 190 WL--------------------------------RDGVEYFLKMRGSGFEPDETSMVLML 217
+ ++ +E +M SG E DE + ++
Sbjct: 234 YFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI 293
Query: 218 SACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK-------------------- 257
ACA G L LG+ VH VLR S +LV +Y K
Sbjct: 294 RACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 258 -----------SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
SG +G A+L+F+ M+++N+L+W MI GLA++GF EE L LF M
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM--KR 410
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+ P + G + +C+ G G +Y ++ + G + A++ +Y + G++
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVE 469
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVH 394
EA + ++MP D + W L++A H
Sbjct: 470 EARQVFRTMPC-LDSVSWNALIAALGQH 496
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 136/309 (44%), Gaps = 13/309 (4%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARK 64
S N +SL C D+ I + LLS V S ++ A+
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV------SSGHIGEAKL 372
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
+ + +SW I+I G A + E + +F M+ G +P F +K CAV A
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
G+Q HA +K G DS + GN LI Y +C + +AR+VF MP VSWN++I A
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR-WVHCQVVLRGMVL 243
++ + V+ + +M G PD +++ +L+AC+ G + GR + + +
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAE----EALSL 298
L+D+ +SG A V E + K W A++ G HG E A L
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL 612
Query: 299 FEMMSENHD 307
F ++ E HD
Sbjct: 613 FGLIPE-HD 620
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 130/337 (38%), Gaps = 73/337 (21%)
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE---------- 172
++L+ + VH + + FG ++ N LI+ Y + ++ AR++FDE+ E
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 173 -----------------------RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPD 209
R V +N++IT N + F KM+ GF+PD
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 210 ETSMVLMLSACAELGYLSLG-RWVHCQVVLRGMVLSCQLGTALVDMYGKSGA----LGYA 264
+ +L+ A + H + G + ALV +Y K + L A
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSA 207
Query: 265 RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN------------------- 305
R VF+ + +++ +W+ M+ G ++G+ + L E M +N
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 306 -----------HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY-G 353
I + TY V+ AC+ AG++ G + YV + H+
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH---AYVLRREDFSFHFDN 324
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
++V +Y + G EA + MP D + W LLS
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 243/479 (50%), Gaps = 15/479 (3%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELV--YV-CSLSPSKNLTHARKLVLHSA 70
SL+N R++D QI A G NT + + +V YV C L A+++ A
Sbjct: 193 SLVNP-RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW-----LVGAKRVFDQMA 246
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
P++ L+ G+ + +A+ +F + GV+ + F +LK CA L GKQ
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+HA K GL+S+V VG L++FY +C A + F E+ E VSW+++I+ +
Sbjct: 307 IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 191 LRDGVEYFLKMRGSGFEP-DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ V+ F +R + + + AC+ L ++G VH + R ++ S +
Sbjct: 367 FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES 426
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
AL+ MY K G L A VFE M+ +++ W+A I G A +G A EAL LFE M +
Sbjct: 427 ALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC--GM 484
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
+PN VT++ VL ACSHAG+V++G M + + P + HY M+DIY R+GLL EA
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
+F+++MP PD + W+ LS C H + +G+ +EL ++P V+ NLY
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLE---LGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLN 488
AG WE AA + ++M + +KK S + G + RF G P +Y L +
Sbjct: 602 WAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD 660
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 164/337 (48%), Gaps = 11/337 (3%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
++L A KL + + +S +I +A +A+ +F M G KP + LL
Sbjct: 132 RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLL 191
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
K AL G+Q+HA ++ GL S+ + ++N Y +C ++ A++VFD+M + PV
Sbjct: 192 KSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 251
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+ ++ + RD ++ F+ + G E D ++L ACA L L+LG+ +H V
Sbjct: 252 ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
G+ +GT LVD Y K + A F+ + + N ++WSA+I G Q EEA+
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV--HYG- 353
F+ + + +I N TY + ACS + G + + IK ++ YG
Sbjct: 372 KTFKSLRSKNASIL-NSFTYTSIFQACSVLADCNIGGQV-----HADAIKRSLIGSQYGE 425
Query: 354 -AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
A++ +Y + G L +A E +SM NPD + W +S
Sbjct: 426 SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFIS 461
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 145/300 (48%), Gaps = 8/300 (2%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDS-DVYVGNNL 150
EA ++M + GV + ++ L + C +L G+ +H D ++ G+++ V + N +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCV 124
Query: 151 INFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDE 210
+ Y C+ + DA K+FDEM E VS ++I+A E L V F M SG +P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER 270
+ +L + L GR +H V+ G+ + + T +V+MY K G L A+ VF++
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 271 MEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLCACSHAGMV 329
M + + + +++G Q G A +AL LF ++++E + + + VL AC+ +
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTE---GVEWDSFVFSVVLKACASLEEL 301
Query: 330 DEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
+ G + + + G++ + +VD Y + A Q + P+ + W ++S
Sbjct: 302 NLGKQIHACVAKL-GLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIIS 359
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 230/431 (53%), Gaps = 10/431 (2%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVK--PNKLT 111
S + A K+ S ISWN +I GF + +A+ F M+E +K P++ T
Sbjct: 153 SKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFT 212
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLD--SDVYVGNNLINFYGRCKKILDARKVFDE 169
LLK C+ + GKQ+H V+ G S + +L++ Y +C + ARK FD+
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 170 MPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG 229
+ E+T +SW+S+I + + + F +++ + D ++ ++ A+ L G
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 230 RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH 289
+ + V L + ++VDMY K G + A F M+ ++V++W+ +I G +H
Sbjct: 333 KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 290 GFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM 349
G ++++ +F M + NI P+ V YL VL ACSH+GM+ EG F ++ HGIKP +
Sbjct: 393 GLGKKSVRIFYEMLRH--NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKE 409
HY +VD+ GRAG L+EA I +MP+ P+ +W+TLLS C VH + +G +V K
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE---LGKEVGKI 507
Query: 410 LLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
LL ++ + N V+++NLY +AG W N R + G+KK AG S V++ + F +
Sbjct: 508 LLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRS 567
Query: 470 GYDSRPDLIPV 480
G DS P L PV
Sbjct: 568 GEDSHP-LTPV 577
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 143/279 (51%), Gaps = 10/279 (3%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
+L+ C +G QVH +K G ++ N LI+ Y +C++ L A KVFD MPER
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
VSW+++++ V N L+ + F +M G P+E + L AC L L G +H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ G + ++G +LVDMY K G + A VF R+ R++++W+AMI G G+ +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY--FREMEYVHGIKPLMVHY 352
AL F MM E + RP+ T +L ACS GM+ G + F H +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI-T 250
Query: 353 GAMVDIYGRAGLL---REAYEFIQSMPVNPDPIVWRTLL 388
G++VD+Y + G L R+A++ I+ + I W +L+
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTM----ISWSSLI 285
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
++V +L C G G VHC ++ G L+ L+DMY K A VF+ M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 272 EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDE 331
+RNV++WSA++ G +G + +LSLF M I PN T+ L AC +++
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ--GIYPNEFTFSTNLKACGLLNALEK 125
Query: 332 GYRYFREMEYVHGI-----KPLMVHYG-AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWR 385
G + +HG +MV G ++VD+Y + G + EA + + + V+ I W
Sbjct: 126 GLQ-------IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWN 177
Query: 386 TLLSA 390
+++
Sbjct: 178 AMIAG 182
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 222/405 (54%), Gaps = 6/405 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+ A+K+ + + W +L++G+ E +F MR+ G+ + LT L+K
Sbjct: 159 TMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVK 218
Query: 118 CCAVGSALREGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
C A + GK VH +++ +D Y+ ++I+ Y +C+ + +ARK+F+ +R V
Sbjct: 219 ACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVV 278
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
W ++I+ + + + F +M P++ ++ +L +C+ LG L G+ VH +
Sbjct: 279 MWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
+ G+ + T+ +DMY + G + AR VF+ M +RNV++WS+MI +G EEAL
Sbjct: 339 IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEAL 398
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
F M N+ PN VT++ +L ACSH+G V EG++ F M +G+ P HY MV
Sbjct: 399 DCFHKMKSQ--NVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
D+ GRAG + EA FI +MPV P W LLSAC +H D G ++ ++LL +EP
Sbjct: 457 DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAG---EIAEKLLSMEPE 513
Query: 417 RGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLG 461
+ V+++N+YA+AGMWE VRR M G +K G+S ++G
Sbjct: 514 KSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 180/385 (46%), Gaps = 7/385 (1%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
L++L+ ++++ Q+ A+ IHG L S L S + + +
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 73 SPISWNILIRGFATSDSPI--EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ SWN ++ G++ S + + + ++ +MR + F +K C L G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H A+K GLD D YV +L+ Y + + A+KVFDE+P R V W ++ ++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV-LSCQLGT 249
+ F MR +G D +++ ++ AC + +G+ VH + R + S L
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+++DMY K L AR +FE RNV+ W+ +I G A+ A EA LF M ++I
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML--RESI 308
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
PN T +L +CS G + G M +GI+ V++ + +D+Y R G ++ A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVH 394
MP + I W ++++A ++
Sbjct: 368 TVFDMMP-ERNVISWSSMINAFGIN 391
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP--E 172
LL + L +QVHA + G + +V +G++L N Y + ++ A F+ +P +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 173 RTPVSWNSVI-------TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGY 225
R SWN+++ T C ++ L + +MR D ++V + AC LG
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLL-----LYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 226 LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILG 285
L G +H + G+ + +LV+MY + G + A+ VF+ + RN + W ++ G
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH--AGMVDEGYR-------YF 336
++ E LF +M + + + +T + ++ AC + AG V + +
Sbjct: 185 YLKYSKDPEVFRLFCLMRDT--GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 337 REMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+ +Y+ +++D+Y + LL A + ++ V+ + ++W TL+S
Sbjct: 243 DQSDYLQ---------ASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISG 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 10 NQCL--SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHAR 63
NQC ++L C S+ L ++ +HG+ + + V S + N+ AR
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKS---VHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
+ + ISW+ +I F + EA+ F KM+ + V PN +TF LL C+
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 124 ALREG-KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS-WNSV 181
++EG KQ + +G+ + +++ GR +I +A+ D MP + S W ++
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
++AC + + E K+ EP+++S+ ++LS Y G W V R M
Sbjct: 488 LSACRIHKEVDLAGEIAEKLL--SMEPEKSSVYVLLSNI----YADAGMWEMVNCVRRKM 541
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 217/399 (54%), Gaps = 37/399 (9%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS-ATPS 73
L C + QL QI + H ++ L+ +L+ S+S S T LV + +PS
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLI---SVSSSFGETQYASLVFNQLQSPS 82
Query: 74 PISWNILIRGFATSDSPIEAIWVF-RKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+WN++IR + + P EA+ +F M + +K TFPF++K C S++R G QVH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV----------- 181
A+K G +DV+ N L++ Y +C K RKVFD+MP R+ VSW ++
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 182 --------------------ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
ITA V+N + + F +M+ +P+E ++V +L A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
+LG LS+GRWVH G VL C LGTAL+DMY K G+L AR VF+ M+ +++ TW++
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY 341
MI L HG EEALSLFE M E ++ P+ +T++GVL AC++ G V +G RYF M
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEA-SVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPD 380
V+GI P+ H M+ + +A + +A ++SM +PD
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 243/504 (48%), Gaps = 73/504 (14%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
K++ ARK+ + I N++IR + + E + VF M V+P+ TFP +L
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 117 KCCAVGSALREGKQVHADAVKFGLDS-------------------------------DVY 145
K C+ + G+++H A K GL S DV
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 146 VGNNLINFYGRCKKILDARKV-------------------------------------FD 168
N+L+ Y + ++ DA +V F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 169 EMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSL 228
+M +++ VSWN +I ++N + VE + +M GFEPD S+ +L AC + LSL
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G+ +H + + ++ + L AL+DMY K G L AR VFE M+ R+V++W+AMI
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPL 348
G +A++LF + ++ + P+ + ++ L ACSHAG+++EG F+ M + I P
Sbjct: 388 SGRGCDAVALFSKLQDS--GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK 408
+ H MVD+ GRAG ++EAY FIQ M + P+ VW LL AC VH D IG
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD---IGLLAAD 502
Query: 409 ELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFF 468
+L + P + G V+++N+YA+AG WE N+R +M+ G+KK G S V++ + F
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 562
Query: 469 AGYDSRPDLIPVYHLLDGLNLHLK 492
G S P +Y LD L +K
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMK 586
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 165/332 (49%), Gaps = 26/332 (7%)
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
+R + VH+ + L + +G L+ Y K + ARKVFDE+PER + N +I +
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
V N + +GV+ F M G PD + +L AC+ G + +GR +H G+ +
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+G LV MYGK G L ARLV + M +R+V++W+++++G AQ+ ++AL + M
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
I + T +L A S+ E Y ++M + G K L V + M+ +Y + +
Sbjct: 235 V--KISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSL-VSWNVMIGVYMKNAM 289
Query: 365 LREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKV-----RKEL---LLV 413
EA E M + PD + ++L AC A +G K+ RK+L LL+
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA---LSLGKKIHGYIERKKLIPNLLL 346
Query: 414 EPRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
E N +I ++YA+ G E+A +V M+
Sbjct: 347 E-----NALI--DMYAKCGCLEKARDVFENMK 371
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 16/278 (5%)
Query: 39 HNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFR 98
H+ ++ L+ S + ++N+ + + + S +SWN++I + + P+EA+ ++
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 99 KMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK 158
+M G +P+ ++ +L C SAL GK++H + L ++ + N LI+ Y +C
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 358
Query: 159 KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLS 218
+ AR VF+ M R VSW ++I+A + D V F K++ SG PD + V L+
Sbjct: 359 CLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA 418
Query: 219 ACAELGYLSLGRWV------HCQVVLRGMVLSCQLGTALVDMYGKSGALGYA-RLVFERM 271
AC+ G L GR H ++ R L+C +VD+ G++G + A R + +
Sbjct: 419 ACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC-----MVDLLGRAGKVKEAYRFIQDMS 473
Query: 272 EKRNVLTWSAMILGLAQHGFAEEAL----SLFEMMSEN 305
+ N W A++ H + L LF++ E
Sbjct: 474 MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ 511
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 223/411 (54%), Gaps = 5/411 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW LI + ++A+ F KMR V PN+ TF + CA S L G+Q+H +
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ GL+ + V N+++ Y C ++ A +F M R +SW+++I + + +G
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+YF MR SG +P + ++ +LS + + GR VH + G+ + + ++L++M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G++ A ++F ++ ++++ +AMI G A+HG ++EA+ LFE RP+ V
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE--KSLKVGFRPDSV 513
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T++ VL AC+H+G +D G+ YF M+ + ++P HYG MVD+ RAG L +A + I
Sbjct: 514 TFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINE 573
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
M D +VW TLL AC +R G + + +L ++P LV +AN+Y+ G
Sbjct: 574 MSWKKDDVVWTTLLIACKAKGDIER---GRRAAERILELDPTCATALVTLANIYSSTGNL 630
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLD 485
E AANVR+ M+ G+ K G S + + + F +G P +Y++L+
Sbjct: 631 EEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 170/345 (49%), Gaps = 18/345 (5%)
Query: 52 SLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMR--ERGVKPNK 109
SL + NL AR++ +SW +I+ + T+++ EA+ +F MR + V P+
Sbjct: 49 SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDT 108
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE 169
+LK C S + G+ +HA AVK L S VYVG++L++ Y R KI + +VF E
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 170 MPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG 229
MP R V+W ++IT V ++G+ YF +M S D + + L ACA L + G
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG 228
Query: 230 RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH 289
+ +H V++RG V + + +L MY + G + +FE M +R+V++W+++I+ +
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 290 GFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH------ 343
G +A+ F M + + PN T+ + AC+ + G E +H
Sbjct: 289 GQEVKAVETFIKM--RNSQVPPNEQTFASMFSACASLSRLVWG-------EQLHCNVLSL 339
Query: 344 GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
G+ + +M+ +Y G L A Q M D I W T++
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTII 383
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 7/296 (2%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S NL A L ISW+ +I G+ + E F MR+ G KP
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALA 415
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
LL + + G+QVHA A+ FGL+ + V ++LIN Y +C I +A +F E
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG-RWV 232
VS ++I E+ ++ ++ F K GF PD + + +L+AC G L LG +
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYF 535
Query: 233 HCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGF 291
+ M + + +VD+ ++G L A + M K++ + W+ +++ G
Sbjct: 536 NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD 595
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCAC-SHAGMVDEGYRYFREMEYVHGIK 346
E E + E + P T L L S G ++E + M+ IK
Sbjct: 596 IERGRRAAERILE----LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIK 647
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 256/494 (51%), Gaps = 24/494 (4%)
Query: 4 RSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSP----SKNL 59
R LS ++L ++ + + L + IH + T ++ SL+ + +
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 60 THARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCC 119
A KL +SW +I G+ + P +AI +R M + VKP+++T +L C
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
A L G ++H A+K L S V V NNLIN Y +CK I A +F +P + +SW
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 180 SVITA------CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
S+I C E L FL+ +P+ ++ L+ACA +G L G+ +H
Sbjct: 469 SIIAGLRLNNRCFEAL-------IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
V+ G+ L L AL+DMY + G + A F +K++V +W+ ++ G ++ G
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGS 580
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
+ LF+ M ++ +RP+ +T++ +LC CS + MV +G YF +ME +G+ P + HY
Sbjct: 581 MVVELFDRMVKSR--VRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYA 637
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLV 413
+VD+ GRAG L+EA++FIQ MPV PDP VW LL+AC +H D +G+ + + +
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID---LGELSAQHIFEL 694
Query: 414 EPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDS 473
+ + G +++ NLYA+ G W A VRR+M++ G+ AG S V++ G + F +
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKY 754
Query: 474 RPDLIPVYHLLDGL 487
P + +L+G
Sbjct: 755 HPQTKEINTVLEGF 768
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 173/321 (53%), Gaps = 13/321 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMR-ERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
SWN+L+ G+A EA+ ++ +M GVKP+ TFP +L+ C L GK+VH
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
V++G + D+ V N LI Y +C + AR +FD MP R +SWN++I+ EN +
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
G+E F MRG +PD ++ ++SAC LG LGR +H V+ G + + +L
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY +G+ A +F RME++++++W+ MI G + ++A+ + MM + D+++P+
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM--DQDSVKPDE 398
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY----GAMVDIYGRAGLLREAY 369
+T VL AC+ G +D G + IK ++ Y ++++Y + + +A
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 370 EFIQSMPVNPDPIVWRTLLSA 390
+ ++P + I W ++++
Sbjct: 454 DIFHNIP-RKNVISWTSIIAG 473
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 5/311 (1%)
Query: 81 IRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGL 140
+ G + EA+ + M+E V ++ F L++ C A EG +V++ A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
V +GN + + R ++DA VF +M ER SWN ++ + + + + + +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 201 MRG-SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSG 259
M G +PD + +L C + L+ G+ VH VV G L + AL+ MY K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 260 ALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGV 319
+ ARL+F+RM +R++++W+AMI G ++G E L LF M ++ P+ +T V
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTLTSV 303
Query: 320 LCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNP 379
+ AC G G R G + ++ +Y AG REA + M
Sbjct: 304 ISACELLGDRRLG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RK 361
Query: 380 DPIVWRTLLSA 390
D + W T++S
Sbjct: 362 DIVSWTTMISG 372
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 151/336 (44%), Gaps = 8/336 (2%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ AR L ISWN +I G+ + E + +F MR V P+ +T ++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C + R G+ +HA + G D+ V N+L Y +A K+F M + VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W ++I+ N ++ + M +PDE ++ +LSACA LG L G +H +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
++ + L++MY K + A +F + ++NV++W+++I GL + EAL
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR-YFREMEYVHGIKPLMVHYGAMV 356
M ++PN +T L AC+ G + G + + G+ + + A++
Sbjct: 486 FLRQMKM---TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALL 540
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
D+Y R G + A+ S D W LL+ S
Sbjct: 541 DMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYS 574
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 224/410 (54%), Gaps = 9/410 (2%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM--RERGVKPNKLT 111
+ SK + +AR++ + ++W+ +I G+ ++ EA VF +M + +
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
+L CA L G+ VH AVK G D+ V N +I+FY + + DA + F E+
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
+ +S+NS+IT CV N + F +MR SG PD T+++ +L+AC+ L L G
Sbjct: 371 LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSS 430
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
H V+ G ++ + AL+DMY K G L A+ VF+ M KR++++W+ M+ G HG
Sbjct: 431 CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGL 490
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY-VHGIKPLMV 350
+EALSLF M E + P+ VT L +L ACSH+G+VDEG + F M + P +
Sbjct: 491 GKEALSLFNSMQET--GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKEL 410
HY M D+ RAG L EAY+F+ MP PD V TLLSAC + + +G++V K++
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAE---LGNEVSKKM 605
Query: 411 LLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
+ +LV+++N Y+ A WE AA +R + + G+ K G S VD+
Sbjct: 606 QSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 172/324 (53%), Gaps = 5/324 (1%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+PI+W+++IR +A++D +A+ ++ KM GV+P K T+PF+LK CA A+ +GK +H
Sbjct: 67 NPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIH 126
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
+ +D+YV L++FY +C ++ A KVFDEMP+R V+WN++I+ + L
Sbjct: 127 SHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLT 186
Query: 193 DGVEYFLKMRG-SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
D + FL MR G P+ +++V M A G L G+ VH G + T +
Sbjct: 187 DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGI 246
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+D+Y KS + YAR VF+ K+N +TWSAMI G ++ +EA +F M N DN+
Sbjct: 247 LDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN-DNVAM 305
Query: 312 NYVTYLG-VLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
+G +L C+ G + G R G + ++ Y + G L +A+
Sbjct: 306 VTPVAIGLILMGCARFGDLSGG-RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFR 364
Query: 371 FIQSMPVNPDPIVWRTLLSACSVH 394
+ + D I + +L++ C V+
Sbjct: 365 QFSEIGLK-DVISYNSLITGCVVN 387
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEM 170
F LL+ C L G+ +H +K L S V NL Y C ++ AR VFDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 171 PER--TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSL 228
P P++W+ +I A N + ++ + KM SG P + + +L ACA L +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G+ +H V + TALVD Y K G L A VF+ M KR+++ W+AMI G +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG---YRYFREMEYVHGI 345
H + + LF M D + PN T +G+ A AG + EG + Y M + +
Sbjct: 182 HCCLTDVIGLFLDM-RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN-- 238
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
L+V G ++D+Y ++ + A + + + + W ++
Sbjct: 239 -DLVVKTG-ILDVYAKSKCIIYARR-VFDLDFKKNEVTWSAMI 278
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 230/421 (54%), Gaps = 8/421 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
ISWN +I GF+ + A +F +M+ V+ + T+ LL C+ GK +H
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 135 AVKFGLDSDVYVGNNLINFYGR--CKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
+K GL+ N LI+ Y + + DA +F+ + + +SWNS+IT +
Sbjct: 331 VIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSE 390
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
D V++F +R S + D+ + +L +C++L L LG+ +H G V + + ++L+
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 253 DMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
MY K G + AR F+++ K + + W+AMILG AQHG + +L LF M + N++
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMC--NQNVKL 508
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
++VT+ +L ACSH G++ EG ME V+ I+P M HY A VD+ GRAGL+ +A E
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
Query: 372 IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEA 431
I+SMP+NPDP+V +T L C A + +V LL +EP V ++++Y++
Sbjct: 569 IESMPLNPDPMVLKTFLGVCR---ACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDL 625
Query: 432 GMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHL 491
WE A+V+++M++ G+KK+ G S +++ + F A S P +Y ++ L +
Sbjct: 626 KKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Query: 492 K 492
+
Sbjct: 686 Q 686
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 10/366 (2%)
Query: 34 IHGHYH-NTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIE 92
I G Y N Y+ S LV + + + + A + + P+ +SWN LI GF
Sbjct: 128 IKGGYECNVYVGSSLVDM--YAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKT 185
Query: 93 AIWVFRKMRER-GVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
A W+ M + V + TF LL KQVHA +K GL ++ + N +I
Sbjct: 186 AFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMI 245
Query: 152 NFYGRCKKILDARKVFDEM-PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDE 210
+ Y C + DA++VFD + + +SWNS+I ++ E F++M+ E D
Sbjct: 246 SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI 305
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK--SGALGYARLVF 268
+ +LSAC+ + G+ +H V+ +G+ AL+ MY + +G + A +F
Sbjct: 306 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 365
Query: 269 ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM 328
E ++ +++++W+++I G AQ G +E+A+ F + + I+ + + +L +CS
Sbjct: 366 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE--IKVDDYAFSALLRSCSDLAT 423
Query: 329 VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+ G + + G +++ +Y + G++ A + Q + + W ++
Sbjct: 424 LQLG-QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 389 SACSVH 394
+ H
Sbjct: 483 LGYAQH 488
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 171/344 (49%), Gaps = 26/344 (7%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW-VFRKMRERGVKPNKLTFPFLLK 117
L +A L +SWN +I G+ TS +E W +F M+ G + +F LLK
Sbjct: 51 LGYANMLFDEMPKRDSVSWNTMISGY-TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLK 109
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
A G+QVH +K G + +VYVG++L++ Y +C+++ DA + F E+ E VS
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 178 WNSVITACVENLWLRDGVEYF-----LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWV 232
WN++I V+ +RD F ++M+ + D + +L+ + + +L + V
Sbjct: 170 WNALIAGFVQ---VRDIKTAFWLLGLMEMK-AAVTMDAGTFAPLLTLLDDPMFCNLLKQV 225
Query: 233 HCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM-EKRNVLTWSAMILGLAQHGF 291
H +V+ G+ + A++ Y G++ A+ VF+ + +++++W++MI G ++H
Sbjct: 226 HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHEL 285
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFRE----MEYVHGIKP 347
E A LF M + + + TY G+L ACS E ++ F + M G++
Sbjct: 286 KESAFELFIQMQRHW--VETDIYTYTGLLSACS-----GEEHQIFGKSLHGMVIKKGLEQ 338
Query: 348 LMVHYGAMVDIYGR--AGLLREAYEFIQSMPVNPDPIVWRTLLS 389
+ A++ +Y + G + +A +S+ + D I W ++++
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIIT 381
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 14/271 (5%)
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
H A+K G SD+YV N +++ Y + + A +FDEMP+R VSWN++I+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
L D F M+ SG + D S +L A + LG VH V+ G + +G++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
LVDMY K + A F+ + + N ++W+A+I G Q + A L +M E +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM-EMKAAVT 200
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH------GIKPLMVHYGAMVDIYGRAGL 364
+ T+ +L ++D+ + ++ VH G++ + AM+ Y G
Sbjct: 201 MDAGTFAPLLT------LLDDP-MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
+ +A + + D I W ++++ S H+
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHE 284
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 55 PSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPF 114
P+ + A L + ISWN +I GFA +A+ F +R +K + F
Sbjct: 354 PTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 413
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER- 173
LL+ C+ + L+ G+Q+HA A K G S+ +V ++LI Y +C I ARK F ++ +
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKH 473
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG-RWV 232
+ V+WN++I ++ + ++ F +M + D + +L+AC+ G + G +
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 533
Query: 233 HCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
+ + + + A VD+ G++G + A+ + E M
Sbjct: 534 NLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 233/435 (53%), Gaps = 10/435 (2%)
Query: 39 HNTYLLSELVYVCSLSPSKNLTHARKL---VLHSATPSPISWNILIRGFATSDSPIEAIW 95
HN LLS+L+ + S+ + L ARK+ V S+ + W + G++ + SP +A+
Sbjct: 165 HNPKLLSKLITLFSVC--RRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
V+ M ++P + LK C LR G+ +HA VK D V N L+ Y
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYM 282
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
DARKVFD M ER V+WNS+I+ + + + + F KM+ ++
Sbjct: 283 ESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
+L AC+ + L G+ +H Q++ L +L+DMYGK G + Y+R VF+ M ++
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
+ +W+ M+ A +G EE ++LFE M E+ + P+ +T++ +L CS G+ + G
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIES--GVAPDGITFVALLSGCSDTGLTEYGLSL 460
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
F M+ + P + HY +VDI GRAG ++EA + I++MP P +W +LL++C +
Sbjct: 461 FERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL-- 518
Query: 396 AHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGE 455
H +G+ KEL ++EP GN V+V+N+YA+A MW+ +R +M+ G+KK AG
Sbjct: 519 -HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 577
Query: 456 SCVDLGGSMIRFFAG 470
S V + + F AG
Sbjct: 578 SWVQVKDKIQIFVAG 592
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 222/414 (53%), Gaps = 7/414 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
I+ +I G ++ + + +F MR V PN +T+ L C+ + EG+Q+HA
Sbjct: 222 ITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHAL 281
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
K+G++S++ + + L++ Y +C I DA +F+ E VS ++ +N +
Sbjct: 282 LWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEA 341
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+++F++M +G E D + +L L LG+ +H V+ R + + L++M
Sbjct: 342 IQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINM 401
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G L ++ VF RM KRN ++W++MI A+HG AL L+E M+ ++P V
Sbjct: 402 YSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL--EVKPTDV 459
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T+L +L ACSH G++D+G EM+ VHGI+P HY ++D+ GRAGLL+EA FI S
Sbjct: 460 TFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDS 519
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
+P+ PD +W+ LL ACS H T +G+ ++L P +++AN+Y+ G W
Sbjct: 520 LPLKPDCKIWQALLGACSF---HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKW 576
Query: 435 -ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
ERA ++R M+ G+ K G S +++ F P +Y +L GL
Sbjct: 577 KERAKTIKR-MKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 125/240 (52%), Gaps = 9/240 (3%)
Query: 140 LDSDVY-----VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+D+D++ V N+L++ Y +C K++DA K+FDEMP R +S N V + N G
Sbjct: 81 VDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESG 140
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+M GSG D ++ ++LS C + + + +H +L G +G L+
Sbjct: 141 FVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITS 199
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G R VF+ M RNV+T +A+I GL ++ E+ L LF +M + PN V
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL--VHPNSV 257
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
TYL L ACS + + EG + + + +GI+ + A++D+Y + G + +A+ +S
Sbjct: 258 TYLSALAACSGSQRIVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 178/424 (41%), Gaps = 55/424 (12%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
L A KL IS NI+ GF + + ++M G + T +L
Sbjct: 105 KLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLS 163
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C K +HA A+ G D ++ VGN LI Y +C + R VFD M R ++
Sbjct: 164 VCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVIT 223
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
+VI+ +EN DG+ F MR P+ + + L+AC+ + G+ +H +
Sbjct: 224 LTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLW 283
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G+ + +AL+DMY K G++ A +FE + + ++ + +++GLAQ+G EEA+
Sbjct: 284 KYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQ 343
Query: 298 LFEMMSENHDNIRPNYVTYL---------------------------------GVLCACS 324
F M + I N V+ + G++ S
Sbjct: 344 FFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYS 403
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG---LLREAYEFIQSMPVNPDP 381
G + + FR M K V + +M+ + R G + YE + ++ V P
Sbjct: 404 KCGDLTDSQTVFRRMP-----KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTD 458
Query: 382 IVWRTLLSACSVHDAHDRTGIGDKVR------KELLLVEPRRGGNLVIVANLYAEAGMWE 435
+ + +LL ACS G+ DK R KE+ +EPR I+ ++ AG+ +
Sbjct: 459 VTFLSLLHACS------HVGLIDKGRELLNEMKEVHGIEPRTEHYTCII-DMLGRAGLLK 511
Query: 436 RAAN 439
A +
Sbjct: 512 EAKS 515
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 219/422 (51%), Gaps = 46/422 (10%)
Query: 56 SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFL 115
+K+L AR+ S + WN +I G+ + +EA +F +M R
Sbjct: 72 NKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR------------ 119
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
DV N ++ Y + +VFD+MPER
Sbjct: 120 ---------------------------DVMSWNTVLEGYANIGDMEACERVFDDMPERNV 152
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHC 234
SWN +I +N + + + F +M G P++ +M L+LSACA+LG G+WVH
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 235 QVVLRGM-VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
G + + AL+DMYGK GA+ A VF+ +++R++++W+ MI GLA HG
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
EAL+LF M + I P+ VT++GVLCAC H G+V++G YF M I P + H G
Sbjct: 273 EALNLFHEMK--NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG 330
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLV 413
+VD+ RAG L +A EFI MPV D ++W TLL A V+ D IG+ +EL+ +
Sbjct: 331 CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD---IGEVALEELIKL 387
Query: 414 EPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDS 473
EPR N V+++N+Y +AG ++ AA ++ MRD G KK AG S ++ +++F++ +
Sbjct: 388 EPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK 447
Query: 474 RP 475
P
Sbjct: 448 HP 449
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 239/445 (53%), Gaps = 20/445 (4%)
Query: 20 RSIDQLHQIQAQFHIHGHYHNTYLLSELVY---VCSLSPSKNLTHARKLVLHSATPSPIS 76
R Q+H I + G Y + Y+ + LV+ VC S+N A K+ +S
Sbjct: 123 REGKQIHGIVTKM---GFYDDIYVQNSLVHFYGVCG--ESRN---ACKVFGEMPVRDVVS 174
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
W +I GF + EA+ F KM V+PN T+ +L L GK +H +
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL 231
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
K + GN LI+ Y +C+++ DA +VF E+ ++ VSWNS+I+ V ++ ++
Sbjct: 232 KRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAID 291
Query: 197 YFLKMR-GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
F M+ SG +PD + +LSACA LG + GRWVH ++ G+ +GTA+VDMY
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
K G + A +F + +NV TW+A++ GLA HG E+L FE M + +PN VT
Sbjct: 352 AKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL--GFKPNLVT 409
Query: 316 YLGVLCACSHAGMVDEGYRYFREMEY-VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
+L L AC H G+VDEG RYF +M+ + + P + HYG M+D+ RAGLL EA E +++
Sbjct: 410 FLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKA 469
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
MPV PD + +LSAC + + ++ L +E G V+++N++A W
Sbjct: 470 MPVKPDVRICGAILSACK--NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRW 527
Query: 435 ERAANVRRVMRDGGMKKMAGESCVD 459
+ A +RR+M+ G+ K+ G S ++
Sbjct: 528 DDVARIRRLMKVKGISKVPGSSYIE 552
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 201/392 (51%), Gaps = 12/392 (3%)
Query: 6 LSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKL 65
L K+ L L++ C S+ QIQ Q + +++++V L S + +
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTF--LGKSADFASYSSV 60
Query: 66 VLHS--ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
+LHS + S S+N L+ +A D P I+ ++ G P+ TFP + K C S
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFS 120
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
+REGKQ+H K G D+YV N+L++FYG C + +A KVF EMP R VSW +IT
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT 180
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
++ ++ F KM EP+ + V +L + +G LSLG+ +H ++ R ++
Sbjct: 181 GFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI 237
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
S + G AL+DMY K L A VF +EK++ ++W++MI GL ++EA+ LF +M
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM- 296
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG-AMVDIYGRA 362
+ I+P+ VL AC+ G VD G R+ E GIK H G A+VD+Y +
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHG-RWVHEYILTAGIK-WDTHIGTAIVDMYAKC 354
Query: 363 GLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
G + A E + + + W LL ++H
Sbjct: 355 GYIETALEIFNGIR-SKNVFTWNALLGGLAIH 385
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 232/419 (55%), Gaps = 10/419 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW +I GF +D EA+ +F +M+ +GV+PN+ T+ +L V S +VHA
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQ 418
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
VK + VG L++ Y + K+ +A KVF + ++ V+W++++ +
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAEL-GYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
++ F ++ G +P+E + +L+ CA + G+ H + + S + +AL+
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY K G + A VF+R ++++++W++MI G AQHG A +AL +F+ M + ++ +
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR--KVKMDG 596
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
VT++GV AC+HAG+V+EG +YF M I P H MVD+Y RAG L +A + I+
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 374 SMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
+MP +WRT+L+AC V H +T +G ++++ ++P V+++N+YAE+G
Sbjct: 657 NMPNPAGSTIWRTILAACRV---HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 434 WERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
W+ A VR++M + +KK G S +++ F AG S P +Y L+ L+ LK
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 184/422 (43%), Gaps = 39/422 (9%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N RK+ + ++W LI G+A + E + +F +M+ G +PN TF L
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
A G QVH VK GLD + V N+LIN Y +C + AR +FD+ ++ V+
Sbjct: 203 VLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT 262
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WNS+I+ N + + F MR + E+S ++ CA L L +HC VV
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEAL 296
G + + TAL+ Y K A+ A +F+ + NV++W+AMI G Q+ EEA+
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAV 382
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACS-------HAGMVDEGYR------------YFR 337
LF M +RPN TY +L A HA +V Y Y +
Sbjct: 383 DLFSEM--KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 338 EMEYVHGIKPL-------MVHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTL 387
+ K +V + AM+ Y + G A + + + P+ + ++
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 388 LSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANL---YAEAGMWERAANVRRVM 444
L+ C+ +A +G + ++ R +L + + L YA+ G E A V +
Sbjct: 501 LNVCAATNA----SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 445 RD 446
R+
Sbjct: 557 RE 558
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 12/318 (3%)
Query: 48 VYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
+Y S L +A L S S+ L+ GF+ EA +F + G++
Sbjct: 32 IYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM 91
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
+ F +LK A G+Q+H +KFG DV VG +L++ Y + D RKVF
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 168 DEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS 227
DEM ER V+W ++I+ N + + F++M+ G +P+ + L AE G
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 228 LGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLA 287
G VH VV G+ + + +L+++Y K G + AR++F++ E ++V+TW++MI G A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP 347
+G EAL +F M N+ +R + ++ V+ C++ +E+ + +
Sbjct: 272 ANGLDLEALGMFYSMRLNY--VRLSESSFASVIKLCAN----------LKELRFTEQLHC 319
Query: 348 LMVHYGAMVDIYGRAGLL 365
+V YG + D R L+
Sbjct: 320 SVVKYGFLFDQNIRTALM 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHS 69
S+LN+C + + QFH G + L S L +L + N+ A ++
Sbjct: 499 SILNVCAATNASMGQGKQFH--GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+SWN +I G+A ++A+ VF++M++R VK + +TF + C + EG+
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 130 QVHADAVKFGLDSDVYVGNN-LINFYGRCKKILDARKVFDEMPERTPVS-WNSVITAC 185
+ V+ + N+ +++ Y R ++ A KV + MP + W +++ AC
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 37/426 (8%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
EA+ VF M + GV+P++++ + C+ + GK H ++ G +S + N LI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 152 NFYGRCKKILDARKVFDEM-------------------------------PERTPVSWNS 180
+ Y +C + A ++FD M PE+ VSWN+
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 181 VITACVENLWLRDGVEYFLKMRGS-GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+I+ V+ + +E F M+ G D +M+ + SAC LG L L +W++ +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ L +LGT LVDM+ + G A +F + R+V W+A I +A G AE A+ LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
+ M E ++P+ V ++G L ACSH G+V +G F M +HG+ P VHYG MVD+
Sbjct: 560 DDMIEQ--GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
GRAGLL EA + I+ MP+ P+ ++W +LL+AC V + +++ ++ P R G
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV---QGNVEMAAYAAEKIQVLAPERTG 674
Query: 420 NLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIP 479
+ V+++N+YA AG W A VR M++ G++K G S + + G F +G +S P++
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 480 VYHLLD 485
+ +LD
Sbjct: 735 IEAMLD 740
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 208/428 (48%), Gaps = 50/428 (11%)
Query: 5 SLSNKNQCL----SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVY-VCSLSPSKNL 59
SL N+++C S L C++ID+L G ++ +++LV C L ++L
Sbjct: 24 SLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESL 83
Query: 60 THARKLVLHSAT-PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ A+++ +S + + +N LIRG+A+S EAI +F +M G+ P+K TFPF L
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA A G Q+H VK G D++V N+L++FY C ++ ARKVFDEM ER VSW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 179 NSVITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
S+I + +D V+ F +M R P+ +MV ++SACA+L L G V+ +
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G+ ++ + +ALVDMY K A+ A+ +F+ N+ +AM + G EAL
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMV---------------------------- 329
+F +M ++ +RP+ ++ L + +CS +
Sbjct: 324 VFNLMMDS--GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 330 -------DEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPI 382
D +R F M +V + ++V Y G + A+E ++MP + +
Sbjct: 382 YMKCHRQDTAFRIFDRMS-----NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIV 435
Query: 383 VWRTLLSA 390
W T++S
Sbjct: 436 SWNTIISG 443
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 12/366 (3%)
Query: 27 QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFAT 86
QI G+ + ++ + LV+ + L ARK+ + + +SW +I G+A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 87 SDSPIEAI-WVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVY 145
D +A+ FR +R+ V PN +T ++ CA L G++V+A G++ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
+ + L++ Y +C I A+++FDE N++ + V R+ + F M SG
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
PD SM+ +S+C++L + G+ H V+ G + AL+DMY K A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 266 LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
+F+RM + V+TW++++ G ++G + A FE M E N V++ ++
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE------KNIVSWNTIISGLVQ 446
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQSMPVNPDPI 382
+ +E F M+ G+ V ++ G G L A Y +I+ + D
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 383 VWRTLL 388
+ TL+
Sbjct: 507 LGTTLV 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 66 VLHSATPSPIS-WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
+ +S T +S W I A + + AI +F M E+G+KP+ + F L C+ G
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 125 LREGKQVHADAVKF-GLD-SDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPVSWNSV 181
+++GK++ +K G+ DV+ G +++ GR + +A ++ ++MP E V WNS+
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 182 ITACVENLWLRDGVEY--FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW---VHCQV 236
+ AC ++ VE + + P+ T ++LS Y S GRW ++
Sbjct: 646 LAAC----RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV----YASAGRWNDMAKVRL 697
Query: 237 VLRGMVLSCQLGTALVDMYGKS 258
++ L GT+ + + GK+
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKT 719
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 233/453 (51%), Gaps = 40/453 (8%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN ++ GF S EA+ +F+K+ G P+++T +L L G+ +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 135 AVKFGLDSDVYVGNNLINFYGR----------------------------------CKKI 160
+K GL D V + +I+ YG+ K
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 161 LDARKVFDEMP-ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
L+ ++F E E VSW S+I C +N + +E F +M+ +G +P+ ++ ML A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTW 279
C + L GR H V ++ + +G+AL+DMY K G + +++VF M +N++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
++++ G + HG A+E +S+FE + ++P+++++ +L AC G+ DEG++YF+ M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTR--LKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 340 EYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
+GIKP + HY MV++ GRAG L+EAY+ I+ MP PD VW LL++C + + D
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD- 574
Query: 400 TGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVD 459
+ + ++L +EP G V+++N+YA GMW ++R M G+KK G S +
Sbjct: 575 --LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 460 LGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
+ + AG S P + + +D ++ ++
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMR 665
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 199/439 (45%), Gaps = 78/439 (17%)
Query: 27 QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS-ATPSPISWNILIRGFA 85
Q A+ G ++ Y+ ++L+ S + N + LVL S P+ S++ LI
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYS---NYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 86 TSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVY 145
+ ++I VF +M G+ P+ P L K CA SA + GKQ+H + GLD D +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPER-------------------------------- 173
V ++ + Y RC ++ DARKVFD M ++
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 174 ---TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR 230
VSWN +++ + + ++ V F K+ GF PD+ ++ +L + + L++GR
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 231 WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
+H V+ +G++ + +A++DMYGKSG + +F + E +A I GL+++G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP--- 347
++AL +FE+ E + N V++ ++ C+ G E FREM+ V G+KP
Sbjct: 333 LVDKALEMFELFKEQ--TMELNVVSWTSIIAGCAQNGKDIEALELFREMQ-VAGVKPNHV 389
Query: 348 -----------------------------LM--VHYG-AMVDIYGRAGLLREAYEFIQSM 375
L+ VH G A++D+Y + G + + M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 376 PVNPDPIVWRTLLSACSVH 394
P + + W +L++ S+H
Sbjct: 450 PTK-NLVCWNSLMNGFSMH 467
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 44 LSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRER 103
LS++V+ ++ P+KNL + WN L+ GF+ E + +F +
Sbjct: 441 LSQIVF--NMMPTKNL---------------VCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 104 GVKPNKLTFPFLLKCCAVGSALREG-KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILD 162
+KP+ ++F LL C EG K + ++G+ + + ++N GR K+ +
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 163 ARKVFDEMP-ERTPVSWNSVITAC 185
A + EMP E W +++ +C
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSC 567
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 37/426 (8%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
EA+ VF M + GV+P++++ + C+ + GK H ++ G +S + N LI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 152 NFYGRCKKILDARKVFDEM-------------------------------PERTPVSWNS 180
+ Y +C + A ++FD M PE+ VSWN+
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 181 VITACVENLWLRDGVEYFLKMRGS-GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+I+ V+ + +E F M+ G D +M+ + SAC LG L L +W++ +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ L +LGT LVDM+ + G A +F + R+V W+A I +A G AE A+ LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
+ M E ++P+ V ++G L ACSH G+V +G F M +HG+ P VHYG MVD+
Sbjct: 560 DDMIEQ--GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
GRAGLL EA + I+ MP+ P+ ++W +LL+AC V + +++ ++ P R G
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV---QGNVEMAAYAAEKIQVLAPERTG 674
Query: 420 NLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIP 479
+ V+++N+YA AG W A VR M++ G++K G S + + G F +G +S P++
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 480 VYHLLD 485
+ +LD
Sbjct: 735 IEAMLD 740
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 208/428 (48%), Gaps = 50/428 (11%)
Query: 5 SLSNKNQCL----SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVY-VCSLSPSKNL 59
SL N+++C S L C++ID+L G ++ +++LV C L ++L
Sbjct: 24 SLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESL 83
Query: 60 THARKLVLHSAT-PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ A+++ +S + + +N LIRG+A+S EAI +F +M G+ P+K TFPF L
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSA 143
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA A G Q+H VK G D++V N+L++FY C ++ ARKVFDEM ER VSW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 179 NSVITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
S+I + +D V+ F +M R P+ +MV ++SACA+L L G V+ +
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G+ ++ + +ALVDMY K A+ A+ +F+ N+ +AM + G EAL
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMV---------------------------- 329
+F +M ++ +RP+ ++ L + +CS +
Sbjct: 324 VFNLMMDS--GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 330 -------DEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPI 382
D +R F M +V + ++V Y G + A+E ++MP + +
Sbjct: 382 YMKCHRQDTAFRIFDRMS-----NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIV 435
Query: 383 VWRTLLSA 390
W T++S
Sbjct: 436 SWNTIISG 443
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 12/366 (3%)
Query: 27 QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFAT 86
QI G+ + ++ + LV+ + L ARK+ + + +SW +I G+A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 87 SDSPIEAI-WVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVY 145
D +A+ FR +R+ V PN +T ++ CA L G++V+A G++ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
+ + L++ Y +C I A+++FDE N++ + V R+ + F M SG
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
PD SM+ +S+C++L + G+ H V+ G + AL+DMY K A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 266 LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
+F+RM + V+TW++++ G ++G + A FE M E N V++ ++
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK------NIVSWNTIISGLVQ 446
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQSMPVNPDPI 382
+ +E F M+ G+ V ++ G G L A Y +I+ + D
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 383 VWRTLL 388
+ TL+
Sbjct: 507 LGTTLV 512
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 18/202 (8%)
Query: 66 VLHSATPSPIS-WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
+ +S T +S W I A + + AI +F M E+G+KP+ + F L C+ G
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 125 LREGKQVHADAVKF-GLD-SDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPVSWNSV 181
+++GK++ +K G+ DV+ G +++ GR + +A ++ ++MP E V WNS+
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 182 ITACVENLWLRDGVEY--FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW---VHCQV 236
+ AC ++ VE + + P+ T ++LS Y S GRW ++
Sbjct: 646 LAAC----RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV----YASAGRWNDMAKVRL 697
Query: 237 VLRGMVLSCQLGTALVDMYGKS 258
++ L GT+ + + GK+
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKT 719
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 252/479 (52%), Gaps = 18/479 (3%)
Query: 14 SLLNLCRSIDQL------HQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVL 67
S+L CR++ L H + + + G + + + CS++ R +
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI-- 173
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
+ ++W LI GF I + ++++M + ++ A ++
Sbjct: 174 --KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTT 231
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
GKQ+HA +K G S++ V N++++ Y RC + +A+ F EM ++ ++WN++I+ +E
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LE 290
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ + F + GF P+ + +++ACA + L+ G+ +H ++ RG + +L
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVEL 350
Query: 248 GTALVDMYGKSGALGYARLVF-ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
AL+DMY K G + ++ VF E +++RN+++W++M++G HG+ EA+ LF+ M +
Sbjct: 351 ANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS- 409
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
IRP+ + ++ VL AC HAG+V++G +YF ME +GI P Y +VD+ GRAG +
Sbjct: 410 -GIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIG 468
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKV-RKELLLVEPRRGGNLVIVA 425
EAYE ++ MP PD W +L AC AH G+ ++ ++++ ++P+ G V+++
Sbjct: 469 EAYELVERMPFKPDESTWGAILGACK---AHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 426 NLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLL 484
+YA G W A VR++MR G KK AG S + + + F P+ VY +L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 167/371 (45%), Gaps = 44/371 (11%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ AR L ++W +I G+A+S+ A F +M ++G PN+ T +LK
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDAR-KVFDEMPERTPVS 177
C L G VH VK G++ +YV N ++N Y C ++A +F ++ + V+
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180
Query: 178 WNSVITACVENLWLRDGV---EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
W ++IT L DG+ + + +M E + + + A A + ++ G+ +H
Sbjct: 181 WTTLITGFTH---LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
V+ RG + + +++D+Y + G L A+ F ME ++++TW+ +I L + + E
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSE 296
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY----RYFR-----EMEYVHGI 345
AL +F+ PN T+ ++ AC++ ++ G R FR +E + +
Sbjct: 297 ALLMFQRFESQ--GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANAL 354
Query: 346 KPL----------------------MVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPD 380
+ +V + +M+ YG G EA E M + PD
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 381 PIVWRTLLSAC 391
IV+ +LSAC
Sbjct: 415 RIVFMAVLSAC 425
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 54/366 (14%)
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
+ NLI Y + +AR +FDEMP+R V+W ++IT + + E F +M G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK-SGALGYA 264
P+E ++ +L +C + L+ G VH VV GM S + A+++MY S + A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 265 RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACS 324
L+F ++ +N +TW+ +I G G L +++ M + + P Y + V + S
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP-YCITIAVRASAS 225
Query: 325 ----------HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
HA ++ G++ P+M +++D+Y R G L EA +
Sbjct: 226 IDSVTTGKQIHASVIKRGFQ---------SNLPVM---NSILDLYCRCGYLSEAKHYFHE 273
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
M + D I W TL+S D+ + LL+ + R + V N Y +
Sbjct: 274 ME-DKDLITWNTLISELERSDSSE----------ALLMFQ--RFESQGFVPNCYTFTSLV 320
Query: 435 ERAANVR----------RVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY-HL 483
AN+ R+ R G K V+L ++I +A + PD V+ +
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKN------VELANALIDMYAKCGNIPDSQRVFGEI 374
Query: 484 LDGLNL 489
+D NL
Sbjct: 375 VDRRNL 380
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 217/412 (52%), Gaps = 9/412 (2%)
Query: 51 CSLSPSKNLTHA-RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPN 108
C L +LT A +L S T SWN +I G A+S +E++ F+ M RE ++ +
Sbjct: 521 CWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHD 580
Query: 109 KLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD 168
+T + + +G+ H A+K + D + N LI YGRCK I A KVF
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 169 EMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSL 228
+ + SWN VI+A +N + G E F R EP+E + V +LSA +LG S
Sbjct: 641 LISDPNLCSWNCVISALSQN---KAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSY 697
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G HC ++ RG + + ALVDMY G L VF ++ W+++I
Sbjct: 698 GMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGF 757
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPL 348
HG E+A+ LF+ +S N + + PN +++ +L ACSH+G +DEG Y+++ME G+KP+
Sbjct: 758 HGMGEKAMELFKELSSNSE-MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK 408
H +VD+ GRAG LREAYEFI + VW LLSAC + H T +G +V +
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSAC---NYHGDTKLGKEVAE 873
Query: 409 ELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
L +EP + +AN Y G WE A +R+++ D +KK+ G S +D+
Sbjct: 874 VLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 14/325 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
I WN +I + I A+ +F +M +G + + T + R+ +H
Sbjct: 154 IVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCL 213
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
A++ GL D + N L+N Y + + + A VF M R VSWN+++T C+ N R
Sbjct: 214 AIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKS 273
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ--LGTALV 252
++YF M GSG E D + ++SAC+ + L+LG +H V+ G +G +++
Sbjct: 274 LQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSII 333
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
MY K G A VFE + R+V++ +A++ G A +G EEA + M ++ D I+P+
Sbjct: 334 SMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM-QSVDKIQPD 392
Query: 313 YVTYLGVLCAC-----SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
T + + C S G GY EM+ + L V +++D+YG+ GL +
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQS----RALEV-INSVIDMYGKCGLTTQ 447
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACS 392
A E + + D + W +++SA S
Sbjct: 448 A-ELLFKTTTHRDLVSWNSMISAFS 471
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 160/346 (46%), Gaps = 26/346 (7%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
+NL+ A + H +SWN ++ + P +++ F+ M G + + +TF ++
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 117 KCCAVGSALREGKQVHADAVKFGL--DSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
C+ L G+ +H +K G ++ V VGN++I+ Y +C A VF+E+ R
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRG-SGFEPDETSMVLMLSACAELGYLSLGRWVH 233
+S N+++ N + +M+ +PD ++V + S C +L + GR VH
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 234 CQVVLRGM-VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFA 292
V M + ++ +++DMYGK G A L+F+ R++++W++MI +Q+GF
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
+A +LF+ + + + + T L +L +C + + +
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLI---------------------F 515
Query: 353 GAMVDIY-GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAH 397
G V + + G L A+ +++M D W +++S C+ H
Sbjct: 516 GKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 194/455 (42%), Gaps = 83/455 (18%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRE-RGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
IS N ++ GFA + EA + +M+ ++P+ T + C S REG+ VH
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 134 DAVKFGLDS-DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
V+ + S + V N++I+ YG+C A +F R VSWNS+I+A +N +
Sbjct: 418 YTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 193 DGVEYFLKMRG--SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
F ++ S + ++++ +L++C L G+ VHC +
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL-------------- 523
Query: 251 LVDMYGKSGALGYARLVFERM-EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
K G L A L E M E R++ +W+++I G A G E+L F+ MS I
Sbjct: 524 -----QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSR-EGKI 577
Query: 310 RPNYVTYLGVLCACSHAGMVDEG-------YRYFREMEYVHGIKPLMVHYG------AMV 356
R + +T LG + A + G+V +G + RE++ L+ YG + V
Sbjct: 578 RHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELD-TQLQNTLITMYGRCKDIESAV 636
Query: 357 DIYG--------------------RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDA 396
++G +AG RE ++ +++ + P+ I + LLSA + +
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQNKAG--REVFQLFRNLKLEPNEITFVGLLSASTQLGS 694
Query: 397 HDRTGIGDKVRKELLLVEPRRG--GNLVIVA---NLYAEAGMWERAANVRRVMRDGGMKK 451
T G + L+ RRG N + A ++Y+ GM E +V R+ G+
Sbjct: 695 ---TSYGMQAHCHLI----RRGFQANPFVSAALVDMYSSCGMLETGM---KVFRNSGVNS 744
Query: 452 MAGESCV-------DLGGSMIRFFAGYDSRPDLIP 479
++ + V +G + F S ++ P
Sbjct: 745 ISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 128/249 (51%), Gaps = 8/249 (3%)
Query: 82 RGFATSD-SPIEAIW--VFRKMRERGVKPNKLTFPFL---LKCCAVGSALREGKQVHADA 135
R F +S SP+ I +F ++ ER + + +F FL L+ + + + VH A
Sbjct: 54 RHFTSSVLSPVTPIVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFA 113
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
+K GL D+ + L+ FYGR +++ + +FDE+ E+ + WNS+ITA +N V
Sbjct: 114 LKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAV 173
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
F++M G E D T+++L SA + L +HC + G+V L AL+++Y
Sbjct: 174 GLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLY 233
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
K L A VF ME R++++W+ ++ +G ++L F+ M+ + + VT
Sbjct: 234 AKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ--EADTVT 291
Query: 316 YLGVLCACS 324
+ V+ ACS
Sbjct: 292 FSCVISACS 300
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 230/433 (53%), Gaps = 9/433 (2%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ AR+L + S+ +I GF + +EA +F+ M E TF +L+
Sbjct: 174 IIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRA 233
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
A ++ GKQ+H A+K G+ + +V LI+ Y +C I DAR F+ MPE+T V+W
Sbjct: 234 SAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAW 293
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N+VI + + + + MR SG D+ ++ +M+ +L L L + H ++
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR 353
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
G TALVD Y K G + AR VF+++ ++N+++W+A++ G A HG +A+ L
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL 413
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
FE M N+ PN+VT+L VL AC+++G+ ++G+ F M VHGIKP +HY M+++
Sbjct: 414 FEKMIAA--NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIEL 471
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRG 418
GR GLL EA FI+ P+ +W LL+AC + + + +G V ++L + P +
Sbjct: 472 LGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLE---LGRVVAEKLYGMGPEKL 528
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAG--YDSRPD 476
GN V++ N+Y G AA V + G+ M + V++G F +G +DS +
Sbjct: 529 GNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNE 588
Query: 477 LIP--VYHLLDGL 487
+ +Y +D L
Sbjct: 589 TVKRQIYQKVDEL 601
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 22/293 (7%)
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM 170
T+ L++ C ++R K+V+ + G + + Y+ N ++ + +C I+DAR++FDE+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 171 PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR 230
PER S+ S+I+ V + E F M + + + +ML A A LG + +G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 231 WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
+H + G+V + + L+DMY K G + AR FE M ++ + W+ +I G A HG
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLG---------VLCACSHAGMVDEGYRYFREMEY 341
++EEAL L M ++ +I ++ + L +HA ++ G+
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF-------- 356
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
+ +V A+VD Y + G + A +P + I W L+ + H
Sbjct: 357 ----ESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANH 404
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 226/424 (53%), Gaps = 12/424 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I + +A+ ++++M +G K + T +L L G+Q H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 135 AVKFGLDSDVYVGNNLINFY---GRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
+K G + +VG+ LI+FY G C + D+ KVF E+ V WN++I+ N L
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 192 -RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG-- 248
+ V+ F +M+ G PD+ S V + SAC+ L S + +H + ++ + S ++
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH-GLAIKSHIPSNRISVN 384
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
AL+ +Y KSG L AR VF+RM + N ++++ MI G AQHG EAL L++ M ++
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS--G 442
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
I PN +T++ VL AC+H G VDEG YF M+ I+P HY M+D+ GRAG L EA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 369 YEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLY 428
FI +MP P + W LL AC H + ++ EL++++P V++AN+Y
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACR---KHKNMALAERAANELMVMQPLAATPYVMLANMY 559
Query: 429 AEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLN 488
A+A WE A+VR+ MR ++K G S +++ F A S P + V L+ +
Sbjct: 560 ADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMM 619
Query: 489 LHLK 492
+K
Sbjct: 620 KKMK 623
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 162/348 (46%), Gaps = 27/348 (7%)
Query: 43 LLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRE 102
+ S V V + + + AR+L P +S+N LI G+A + A+ +F++MR+
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 103 RGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILD 162
G + + T L+ C L KQ+H +V G DS V N + +Y + + +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 163 ARKVFDEMPE-RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
A VF M E R VSWNS+I A ++ + + +M GF+ D ++ +L+A
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSG---ALGYARLVFERMEKRNVLT 278
L +L GR H +++ G + +G+ L+D Y K G + + VF+ + +++
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 279 WSAMILGLA-QHGFAEEALSLFEMMSE-NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYF 336
W+ MI G + +EEA+ F M H RP+ +++ V ACS+
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGH---RPDDCSFVCVTSACSNLSSPS------ 362
Query: 337 REMEYVHGIKPLMVHY--------GAMVDIYGRAGLLREAYEFIQSMP 376
+ + +HG+ + H A++ +Y ++G L++A MP
Sbjct: 363 -QCKQIHGL-AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 41/320 (12%)
Query: 111 TFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRC------------- 157
TF LL L GK +HA VK + S Y+ N+ +N Y +C
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 158 ------------------KKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFL 199
KI AR++FDE+P+ VS+N++I+ + + F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 200 KMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSG 259
+MR GFE D ++ +++AC + + L + +HC V G + A V Y K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 260 ALGYARLVFERMEK-RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLG 318
L A VF M++ R+ ++W++MI+ QH +AL+L++ M + + T
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI--FKGFKIDMFTLAS 245
Query: 319 VLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA-MVDIYGRAGLLREAY--EFIQSM 375
VL A + + G ++ ++ + H G+ ++D Y + G Y E +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKL--IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 376 PVNPDPIVWRTLLSACSVHD 395
++PD +VW T++S S+++
Sbjct: 304 ILSPDLVVWNTMISGYSMNE 323
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 22/186 (11%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGH--YHNTYLLSELVYVCSLSPSKNLTHA 62
+LS+ +QC Q+H + + HI + N L+S L Y S NL A
Sbjct: 357 NLSSPSQC----------KQIHGLAIKSHIPSNRISVNNALIS-LYY-----KSGNLQDA 400
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R + + +S+N +I+G+A EA+ ++++M + G+ PNK+TF +L CA
Sbjct: 401 RWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC 460
Query: 123 SALREGKQVHADAVK--FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT-PVSWN 179
+ EG Q + + +K F ++ + + +I+ GR K+ +A + D MP + V+W
Sbjct: 461 GKVDEG-QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 180 SVITAC 185
+++ AC
Sbjct: 520 ALLGAC 525
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 227/435 (52%), Gaps = 6/435 (1%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
++ +R+++L ++WN LI G+A + P +A+ F+ MR GV N +T +L
Sbjct: 396 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 455
Query: 119 CAV-GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C + G L GK +HA V G +SD +V N+LI Y +C + ++ +F+ + R ++
Sbjct: 456 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 515
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN+++ A + + ++ KMR G D+ S LSA A+L L G+ +H V
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G + A DMY K G +G + R++ +W+ +I L +HG+ EE +
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F M E I+P +VT++ +L ACSH G+VD+G Y+ + G++P + H ++D
Sbjct: 636 TFHEMLEM--GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 693
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR 417
+ GR+G L EA FI MP+ P+ +VWR+LL++C +H DR G K + L +EP
Sbjct: 694 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR---GRKAAENLSKLEPED 750
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDL 477
V+ +N++A G WE NVR+ M +KK S V L + F G + P
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Query: 478 IPVYHLLDGLNLHLK 492
+ +Y L+ + +K
Sbjct: 811 MEIYAKLEDIKKLIK 825
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 167/340 (49%), Gaps = 26/340 (7%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA-VGSALREGKQVHA 133
+SWN ++ G +E + FRKM + G+KP+ L+ C GS REG QVH
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
K GL SDVYV +++ YG + +RKVF+EMP+R VSW S++ + +
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
++ + MRG G +E SM L++S+C L SLGR + QVV G+ + +L+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
M G G + YA +F++M +R+ ++W+++ AQ+G EE+ +F +M HD +
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 314 V-TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG---------AMVDIYGRAG 363
V T L VL H ++ GI L+V G ++ +Y AG
Sbjct: 247 VSTLLSVLGHVDH-------------QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 364 LLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
EA + MP D I W +L+ A V+D +G
Sbjct: 294 RSVEANLVFKQMPTK-DLISWNSLM-ASFVNDGRSLDALG 331
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 176/373 (47%), Gaps = 10/373 (2%)
Query: 33 HIHGHYHNTYLLSELVYVCS-----LSPSKNLTHARKLVLHSATPSPISWNILIRGFATS 87
+HG + LLS+ VYV + ++ +RK+ + +SW L+ G++
Sbjct: 63 QVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 88 DSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVG 147
P E I +++ MR GV N+ + ++ C + G+Q+ VK GL+S + V
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 148 NNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
N+LI+ G + A +FD+M ER +SWNS+ A +N + + F MR E
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
+ T++ +LS + + GR +H VV G + L+ MY +G A LV
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
F++M +++++W++++ G + +AL L M + ++ NYVT+ L AC
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALAACFTPD 359
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTL 387
++G R + V G+ + A+V +YG+ G + E+ + MP D + W L
Sbjct: 360 FFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 417
Query: 388 LSACSVHDAHDRT 400
+ + + D+
Sbjct: 418 IGGYAEDEDPDKA 430
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 9/351 (2%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N+ +A + + ISWN + +A + E+ +F MR + N T LL
Sbjct: 193 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
+ G+ +H VK G DS V V N L+ Y + ++A VF +MP + +S
Sbjct: 253 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 312
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WNS++ + V + D + M SG + + L+AC + GR +H VV
Sbjct: 313 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 372
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ G+ + +G ALV MYGK G + +R V +M +R+V+ W+A+I G A+ ++AL+
Sbjct: 373 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 432
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F+ M + + NY+T + VL AC G + E + G + +++
Sbjct: 433 AFQTM--RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK 408
+Y + G L + + + N + I W +L+A + H G G++V K
Sbjct: 491 MYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH------GHGEEVLK 534
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 170 MPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL-SL 228
MP R VSWN++++ V +G+E+F KM G +P + +++AC G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G VH V G++ + TA++ +YG G + +R VFE M RNV++W+++++G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 289 HGFAEEALSLFEMM 302
G EE + +++ M
Sbjct: 121 KGEPEEVIDIYKGM 134
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 228/436 (52%), Gaps = 8/436 (1%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
L AR++ S ++WN +I+G+ + + +M G +P++ T +L
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
C+ L GK +H ++ +++D+YV +LI+ Y +C + A VF + + SW
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 179 NSVITACVE-NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
N +I++ + W + VE + +M G +PD + +L AC++L L G+ +H +
Sbjct: 379 NVMISSYISVGNWFK-AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ L +AL+DMY K G A +F + K++V++W+ MI HG EAL
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F+ M + ++P+ VT L VL AC HAG++DEG ++F +M +GI+P++ HY M+D
Sbjct: 498 QFDEMQKF--GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMID 555
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPI-VWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
I GRAG L EAYE IQ P D + TL SAC +H H +GD++ + L+ P
Sbjct: 556 ILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEH---SLGDRIARLLVENYPD 612
Query: 417 RGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
+++ NLYA W+ A VR M++ G++K G S +++ + FFA S
Sbjct: 613 DASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLR 672
Query: 477 LIPVYHLLDGLNLHLK 492
VY L L+ H++
Sbjct: 673 AENVYECLALLSGHME 688
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 40/352 (11%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGV-KPNKLTFPFLLKCCAVGSALRE--GKQVHA 133
WN L+ G++ + + + VF+++ + P+ TFP ++K A G+ RE G+ +H
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGALGREFLGRMIHT 131
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
VK G DV V ++L+ Y + ++ +VFDEMPER SWN+VI+ ++
Sbjct: 132 LVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEK 191
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+E F +M SGFEP+ S+ + +SAC+ L +L G+ +H + V +G L + +ALVD
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVD 251
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MYGK L AR VF++M +++++ W++MI G G ++ + + M + RP+
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI--IEGTRPSQ 309
Query: 314 VTYLGVLCACSHA-----GMVDEGY------------------RYFR-------EMEYVH 343
T +L ACS + G GY YF+ E +
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK 369
Query: 344 GIKPLMVHYGAMVDIYGRAG---LLREAYEFIQSMPVNPDPIVWRTLLSACS 392
K + + M+ Y G E Y+ + S+ V PD + + ++L ACS
Sbjct: 370 TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 160/319 (50%), Gaps = 4/319 (1%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
SWN +I F S +A+ +F +M G +PN ++ + C+ L GK++H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
VK G + D YV + L++ YG+C + AR+VF +MP ++ V+WNS+I V + V
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
E +M G P +T++ +L AC+ L G+++H V+ + + +L+D+Y
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
K G A VF + +K +W+ MI G +A+ +++ M ++P+ VT
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV--GVKPDVVT 412
Query: 316 YLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
+ VL ACS +++G + + ++ + A++D+Y + G +EA+ S+
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 376 PVNPDPIVWRTLLSACSVH 394
P D + W ++SA H
Sbjct: 472 P-KKDVVSWTVMISAYGSH 489
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 130/287 (45%), Gaps = 22/287 (7%)
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
L +C +LR K VH + GL DV + +LIN Y CK AR VF+
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 172 ERTPVS-WNSVITACVENLWLRDGVEYFLKMRGSGF-EPDETSMVLMLSACAELGYLSLG 229
R+ V WNS+++ +N D +E F ++ PD + ++ A LG LG
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 230 RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH 289
R +H VV G V + ++LV MY K + VF+ M +R+V +W+ +I Q
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 290 GFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM--------EY 341
G AE+AL LF M + PN V+ + ACS ++ G R+ EY
Sbjct: 187 GEAEKALELFGRMESS--GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
V+ A+VD+YG+ L A E Q MP + W +++
Sbjct: 245 VN---------SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 134/256 (52%), Gaps = 14/256 (5%)
Query: 14 SLLNLC-RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL------SPSKNLTHARKLV 66
S+L C RS + LH +F IHG+ + + +++ CSL NL A +
Sbjct: 314 SILMACSRSRNLLH---GKF-IHGYVIRSVVNADIYVNCSLIDLYFKCGEANL--AETVF 367
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
+ SWN++I + + + +A+ V+ +M GVKP+ +TF +L C+ +AL
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
+GKQ+H + L++D + + L++ Y +C +A ++F+ +P++ VSW +I+A
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYG 487
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR-GMVLSC 245
+ R+ + F +M+ G +PD +++ +LSAC G + G Q+ + G+
Sbjct: 488 SHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII 547
Query: 246 QLGTALVDMYGKSGAL 261
+ + ++D+ G++G L
Sbjct: 548 EHYSCMIDILGRAGRL 563
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 227/435 (52%), Gaps = 6/435 (1%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
++ +R+++L ++WN LI G+A + P +A+ F+ MR GV N +T +L
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472
Query: 119 CAV-GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C + G L GK +HA V G +SD +V N+LI Y +C + ++ +F+ + R ++
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN+++ A + + ++ KMR G D+ S LSA A+L L G+ +H V
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G + A DMY K G +G + R++ +W+ +I L +HG+ EE +
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F M E I+P +VT++ +L ACSH G+VD+G Y+ + G++P + H ++D
Sbjct: 653 TFHEMLEM--GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR 417
+ GR+G L EA FI MP+ P+ +VWR+LL++C +H DR G K + L +EP
Sbjct: 711 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDR---GRKAAENLSKLEPED 767
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDL 477
V+ +N++A G WE NVR+ M +KK S V L + F G + P
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Query: 478 IPVYHLLDGLNLHLK 492
+ +Y L+ + +K
Sbjct: 828 MEIYAKLEDIKKLIK 842
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 173/353 (49%), Gaps = 26/353 (7%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA- 120
AR L + +SWN ++ G +E + FRKM + G+KP+ L+ C
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
GS REG QVH K GL SDVYV +++ YG + +RKVF+EMP+R VSW S
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
++ + + ++ + MRG G +E SM L++S+C L SLGR + QVV G
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
+ + +L+ M G G + YA +F++M +R+ ++W+++ AQ+G EE+ +F
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 301 MMSENHDNIRPNYV-TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG------ 353
+M HD + V T L VL G VD ++ GI L+V G
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVL------GHVD-------HQKWGRGIHGLVVKMGFDSVVC 297
Query: 354 ---AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
++ +Y AG EA + MP D I W +L+ A V+D +G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM-ASFVNDGRSLDALG 348
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 176/373 (47%), Gaps = 10/373 (2%)
Query: 33 HIHGHYHNTYLLSELVYVCS-----LSPSKNLTHARKLVLHSATPSPISWNILIRGFATS 87
+HG + LLS+ VYV + ++ +RK+ + +SW L+ G++
Sbjct: 80 QVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 138
Query: 88 DSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVG 147
P E I +++ MR GV N+ + ++ C + G+Q+ VK GL+S + V
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 148 NNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
N+LI+ G + A +FD+M ER +SWNS+ A +N + + F MR E
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
+ T++ +LS + + GR +H VV G + L+ MY +G A LV
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
F++M +++++W++++ G + +AL L M + ++ NYVT+ L AC
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV--NYVTFTSALAACFTPD 376
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTL 387
++G R + V G+ + A+V +YG+ G + E+ + MP D + W L
Sbjct: 377 FFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 434
Query: 388 LSACSVHDAHDRT 400
+ + + D+
Sbjct: 435 IGGYAEDEDPDKA 447
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 9/351 (2%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N+ +A + + ISWN + +A + E+ +F MR + N T LL
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
+ G+ +H VK G DS V V N L+ Y + ++A VF +MP + +S
Sbjct: 270 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 329
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WNS++ + V + D + M SG + + L+AC + GR +H VV
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 389
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ G+ + +G ALV MYGK G + +R V +M +R+V+ W+A+I G A+ ++AL+
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 449
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F+ M + + NY+T + VL AC G + E + G + +++
Sbjct: 450 AFQTM--RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK 408
+Y + G L + + + N + I W +L+A + H G G++V K
Sbjct: 508 MYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHH------GHGEEVLK 551
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 154 YGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSM 213
Y + ++ AR +FD MP R VSWN++++ V +G+E+F KM G +P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 214 VLMLSACAELGYL-SLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME 272
+++AC G + G VH V G++ + TA++ +YG G + +R VFE M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 273 KRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
RNV++W+++++G + G EE + +++ M
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 151
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 227/435 (52%), Gaps = 6/435 (1%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLK 117
L ARKL SW ++ G+ D P EA+ ++ M R +PN T +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
A +R GK++H V+ GLDSD + ++L++ YG+C I +AR +FD++ E+ VS
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W S+I ++ R+G F ++ GS P+E + +L+ACA+L LG+ VH +
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G ++LVDMY K G + A+ V + K ++++W+++I G AQ+G +EAL
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
F+++ ++ +P++VT++ VL AC+HAG+V++G +F + H + HY +VD
Sbjct: 407 YFDLLLKS--GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR 417
+ R+G + I MP+ P +W ++L CS + D + ++ +EL +EP
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID---LAEEAAQELFKIEPEN 521
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDL 477
V +AN+YA AG WE +R+ M++ G+ K G S ++ F A S P
Sbjct: 522 PVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMY 581
Query: 478 IPVYHLLDGLNLHLK 492
+ L L +K
Sbjct: 582 NQIVEFLRELRKKMK 596
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 36/328 (10%)
Query: 103 RGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILD 162
R KP T+ L++ C+ AL EGK+VH G + + N L+ Y +C ++D
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD 138
Query: 163 ARKVFDEMPERTPVSWNSVI---------------------------TACVENLWLRDGV 195
ARKVFDEMP R SWN ++ TA V +D
Sbjct: 139 ARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQP 198
Query: 196 E-----YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
E Y L R P+ ++ + ++A A + + G+ +H +V G+ L ++
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+DMYGK G + AR +F+++ +++V++W++MI + E SLF + + + R
Sbjct: 259 LMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE--R 316
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
PN T+ GVL AC+ + G + M V G P ++VD+Y + G + A
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHD 398
+ P PD + W +L+ C+ + D
Sbjct: 376 VVDGCP-KPDLVSWTSLIGGCAQNGQPD 402
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 121/303 (39%), Gaps = 60/303 (19%)
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA------- 184
H++A K + NL +F+ K+ D +K F+ E V + A
Sbjct: 3 HSNARKLTTLHGFILKRNLSSFHASLKRFSD-KKFFNPNHEDGGVVVERLCRANRFGEAI 61
Query: 185 ---CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
C + L LR+ V+ + G +P ++ ++ C++ L G+ VH + G
Sbjct: 62 DVLCGQKL-LREAVQ----LLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
V + L+ MY K G+L AR VF+ M R++ +W+ M+ G A+ G EEA LF+
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 302 MSENHD------------------------------NIRPNYVTYLGVLCACSHAGMVDE 331
M+E N RPN T S A
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT-------VSIAVAAAA 229
Query: 332 GYRYFREMEYVH------GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWR 385
+ R + +H G+ V + +++D+YG+ G + EA + V D + W
Sbjct: 230 AVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWT 288
Query: 386 TLL 388
+++
Sbjct: 289 SMI 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N+ A+ +V P +SW LI G A + P EA+ F + + G KP+ +TF +L
Sbjct: 369 NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 118 CCAVGSALREGKQVH---ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER- 173
C + +G + + + SD Y L++ R + + V EMP +
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTC--LVDLLARSGRFEQLKSVISEMPMKP 486
Query: 174 TPVSWNSVITAC 185
+ W SV+ C
Sbjct: 487 SKFLWASVLGGC 498
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 226/426 (53%), Gaps = 11/426 (2%)
Query: 48 VYVCS-----LSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRE 102
V+VCS + A L A I W ++ GFA + ++A+ +R+M+
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 103 RGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILD 162
G +++ LL+ + G+ VH + GL +V V +L++ Y + I
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 163 ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
A +VF M +T VSW S+I+ +N E ++M+ GF+PD ++V +L AC++
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
+G L GR VHC +L+ VL TAL+DMY K GAL +R +FE + +++++ W+ M
Sbjct: 331 VGSLKTGRLVHC-YILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV 342
I HG +E +SLF M+E+ NI P++ T+ +L A SH+G+V++G +F M
Sbjct: 390 ISCYGIHGNGQEVVSLFLKMTES--NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK 447
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGI 402
+ I+P HY ++D+ RAG + EA + I S ++ +W LLS C H +
Sbjct: 448 YKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCI---NHRNLSV 504
Query: 403 GDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGG 462
GD ++L + P G +V+N +A A W+ A VR++MR+G M+K+ G S +++ G
Sbjct: 505 GDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNG 564
Query: 463 SMIRFF 468
+ F
Sbjct: 565 ELRTFL 570
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 174/337 (51%), Gaps = 7/337 (2%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+++ARK+ +N +I ++ +P E + ++ +M ++P+ TF +K
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA 125
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
C G L +G+ V AV FG +DV+V ++++N Y +C K+ +A +F +M +R + W
Sbjct: 126 CLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICW 185
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
+++T + VE++ +M+ GF D M+ +L A +LG +GR VH +
Sbjct: 186 TTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR 245
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
G+ ++ + T+LVDMY K G + A VF RM + ++W ++I G AQ+G A +A
Sbjct: 246 TGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA--- 302
Query: 299 FEMMSENHD-NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
FE + E +P+ VT +GVL ACS G + G + H + V A++D
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR--VTATALMD 360
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
+Y + G L + E + + D + W T++S +H
Sbjct: 361 MYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIH 396
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 237/446 (53%), Gaps = 46/446 (10%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ W L+ F+ + ++ +F +MR + V+ + ++ L CA L +Q H
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV 136
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
AVK G+ + V V N L++ YG+C + + +++F+E+ E++ VSW V+ V+ L G
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 195 VEYFLKMR---------------GSGFEPDE-----------------TSMVLMLSACAE 222
E F +M G+GF + ++ MLSACA+
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 223 LGYLSLGRWVHCQVVLRGMVL-------SCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
G L +GRWVH + + M++ +GTALVDMY K G + + VF M KRN
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
V+TW+A+ GLA HG + +F M ++P+ +T+ VL ACSH+G+VDEG+R
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIR---EVKPDDLTFTAVLSACSHSGIVDEGWRC 373
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD 395
F + + +G++P + HY MVD+ GRAGL+ EA ++ MPV P+ +V +LL +CSV
Sbjct: 374 FHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV-- 430
Query: 396 AHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGE 455
H + I +++++EL+ + P ++++N+Y G + A +R +R G++K+ G
Sbjct: 431 -HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 456 SCVDLGGSMIRFFAGYDSRPDLIPVY 481
S + + S+ RF +G S P +Y
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIY 515
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 146/323 (45%), Gaps = 45/323 (13%)
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDS--DVYVGNNLINFYGRCKKILDARKVFDEMP 171
LL+ CA S LR GK++HA GL Y+ N L FY +++ A+K+FDE+P
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 172 --ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG 229
E+ V W +++++ L + ++ F++MR E D+ S+V + CA+L L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 230 RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME----------------- 272
+ H V G++ S ++ AL+DMYGK G + + +FE +E
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 273 --------------KRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYL 317
+RN + W+ M+ G GF E L L EM+ + N+VT
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTLC 248
Query: 318 GVLCACSHAGMVDEG-----YRYFREMEYVHGIKPLMVHYG-AMVDIYGRAGLLREAYEF 371
+L AC+ +G + G Y +EM V G A+VD+Y + G + +
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 372 IQSMPVNPDPIVWRTLLSACSVH 394
+ M + + W L S ++H
Sbjct: 309 FRLMR-KRNVVTWNALFSGLAMH 330
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 233/443 (52%), Gaps = 16/443 (3%)
Query: 36 GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
G +T+ ++ LV S K + ARKL P+ +SW +I G+ P A+
Sbjct: 59 GFASDTFTVNHLVI--SYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 116
Query: 96 VFRKMRE-RGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFY 154
+F+KM E R V PN+ TF + K C+ + R GK +HA GL ++ V ++L++ Y
Sbjct: 117 MFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 176
Query: 155 GRCKKILDARKVFDEMPE--RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETS 212
G+C + AR+VFD M R VSW S+ITA +N + +E F + D +
Sbjct: 177 GKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF-NAALTSDRAN 235
Query: 213 MVLM---LSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFE 269
++ +SAC+ LG L G+ H V G + + T+L+DMY K G+L A +F
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Query: 270 RMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMV 329
R+ +V+++++MI+ A+HG E A+ LF+ M I PNYVT LGVL ACSH+G+V
Sbjct: 296 RIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGR--INPNYVTLLGVLHACSHSGLV 353
Query: 330 DEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPD--PIVWRTL 387
+EG Y M +G+ P HY +VD+ GR G + EAYE +++ V + ++W L
Sbjct: 354 NEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGAL 413
Query: 388 LSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDG 447
LSA + H R I + K L+ + + ++N YA +G WE + ++R M+
Sbjct: 414 LSAGRL---HGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 448 GMKKMAGESCVDLGGSMIRFFAG 470
G K S ++ S+ F AG
Sbjct: 471 GNVKERACSWIENKDSVYVFHAG 493
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 4/238 (1%)
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H +K G SD + N+L+ Y + K+I ARK+FDEM E VSW SVI+ +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 191 LRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
++ + F KM P+E + + AC+ L +G+ +H ++ + G+ + + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 250 ALVDMYGKSGALGYARLVFERM--EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+LVDMYGK + AR VF+ M RNV++W++MI AQ+ EA+ LF +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+ R N V+ ACS G + G + + G + V +++D+Y + G L
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 223/432 (51%), Gaps = 8/432 (1%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
A KL + ISW +I G ++ EA+ +F+ M +K F ++ CA
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
A G QVH +K G + YV +LI FY CK+I D+RKVFDE W ++
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
++ N D + F M + P++++ L++C+ LG L G+ +H V G+
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+G +LV MY SG + A VF ++ K+++++W+++I+G AQHG + A +F
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY-VHGIKPLMVHYGAMVDIYG 360
M N P+ +T+ G+L ACSH G +++G + F M ++ I + HY MVDI G
Sbjct: 418 MIRL--NKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGN 420
R G L+EA E I+ M V P+ +VW LLSAC +H DR G+K + ++ +
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDR---GEKAAAAIFNLDSKSSAA 532
Query: 421 LVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPV 480
V+++N+YA AG W + +R M+ G+ K G S V + G FF+G +P +
Sbjct: 533 YVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSG--DQPHCSRI 590
Query: 481 YHLLDGLNLHLK 492
Y L+ L LK
Sbjct: 591 YEKLEFLREKLK 602
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 5/257 (1%)
Query: 36 GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
G + Y+ + L+ + K + +RK+ W L+ G++ + +A+
Sbjct: 255 GFLYEEYVSASLITF--YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
+F M + PN+ TF L C+ L GK++H AVK GL++D +VGN+L+ Y
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
+ DA VF ++ +++ VSWNS+I C ++ + F +M EPDE +
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 216 MLSACAELGYLSLGR--WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM-E 272
+LSAC+ G+L GR + + + + Q T +VD+ G+ G L A + ERM
Sbjct: 433 LLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 273 KRNVLTWSAMILGLAQH 289
K N + W A++ H
Sbjct: 493 KPNEMVWLALLSACRMH 509
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 22/350 (6%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNK 109
+ + S L A L +SWN +I G A+ +F +M ER V
Sbjct: 73 ITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV---- 128
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFD 168
+++ ++ C R GK A+ + + + D N++++ Y + K+ DA K+F
Sbjct: 129 VSWTAMVNGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFK 183
Query: 169 EMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSL 228
+MP + +SW ++I +N + ++ F M + +++ACA +
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHM 243
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G VH ++ G + + +L+ Y +G +R VF+ V W+A++ G +
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH---GI 345
+ E+ALS+F M N +I PN T+ L +CS G +D G +EM V G+
Sbjct: 304 NKKHEDALSIFSGMLRN--SILPNQSTFASGLNSCSALGTLDWG----KEMHGVAVKLGL 357
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYE-FIQSMPVNPDPIVWRTLLSACSVH 394
+ ++V +Y +G + +A FI+ + W +++ C+ H
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF--KKSIVSWNSIIVGCAQH 405
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 36/263 (13%)
Query: 148 NNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
+I Y R +++DA +FDEMP R VSWNS+I+ CVE + V+ F +M E
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP----E 125
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
S M++ C G + + Q+ ++ ++V Y + G + A +
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA----AWNSMVHGYLQFGKVDDALKL 181
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
F++M +NV++W+ MI GL Q+ + EAL LF+ M I+ + V+ AC++A
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC--CIKSTSRPFTCVITACANAP 239
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL------------REAYEFIQSM 375
G + VHG L++ G + + Y A L+ R+ ++
Sbjct: 240 AFHMGIQ-------VHG---LIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD----E 285
Query: 376 PVNPDPIVWRTLLSACSVHDAHD 398
V+ VW LLS S++ H+
Sbjct: 286 KVHEQVAVWTALLSGYSLNKKHE 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 246 QLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
L T ++ Y +S L A +F+ M R+V++W++MI G + G A+ LF+ M E
Sbjct: 67 SLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER 126
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+ V++ ++ C +G VD+ R F +M +K + +MV Y + G +
Sbjct: 127 ------SVVSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAA-WNSMVHGYLQFGKV 175
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
+A + + MP + I W T++ C + D ++R+G + K +L
Sbjct: 176 DDALKLFKQMP-GKNVISWTTMI--CGL-DQNERSGEALDLFKNML 217
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 129/286 (45%), Gaps = 32/286 (11%)
Query: 6 LSNKNQCLSLLNLCRSI------DQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNL 59
L N++ S LN C ++ ++H + + G + ++ + LV + S S N+
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL---GLETDAFVGNSLVVM--YSDSGNV 377
Query: 60 THARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCC 119
A + + S +SWN +I G A A +F +M +P+++TF LL C
Sbjct: 378 NDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSAC 437
Query: 120 AVGSALREGKQV--HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER-TPV 176
+ L +G+++ + + +D + +++ GRC K+ +A ++ + M + +
Sbjct: 438 SHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEM 497
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMV--LMLSACAELGYLSLGRWVHC 234
W ++++AC + V+ K + F D S ++LS Y S GRW +
Sbjct: 498 VWLALLSACR----MHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNI----YASAGRWSNV 549
Query: 235 ---QVVLRGMVLSCQLGTALVDMYGK-----SGALGYARLVFERME 272
+V ++ + + G++ V + GK SG + ++E++E
Sbjct: 550 SKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLE 595
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 279/571 (48%), Gaps = 89/571 (15%)
Query: 1 MNTRSLSNKNQCLSL-LNLCRSIDQLHQIQAQFHIH----GHYHNTYLLSELVYVCSLSP 55
M R L+ L L L CR + + +A FH G N ++++EL+ +L P
Sbjct: 149 MRQRGLTGDGYILPLILRACRYLGRFGLCRA-FHTQVIQIGLKENLHVVNELL---TLYP 204
Query: 56 -SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPF 114
+ + A L + + +SWN++I+GF+ A+ +F M+ KP+++T+
Sbjct: 205 KAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTS 264
Query: 115 LLKC-----------------------------------CAVGSALREGKQVHADAVKFG 139
+L C CA AL ++VH +K G
Sbjct: 265 VLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGG 324
Query: 140 LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE------------ 187
+ + N LI+ YG+ K+ DA +F ++ + SWNS+IT+ V+
Sbjct: 325 FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFS 384
Query: 188 -------------------------NLWLR--DGVEYFLKMRGSGFEPDETSMVLMLSAC 220
N+ R D +EYF +M+ S + ++ +LS C
Sbjct: 385 ELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSIC 444
Query: 221 AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWS 280
AEL L+LGR +H V+ M + + ALV+MY K G L LVFE + +++++W+
Sbjct: 445 AELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWN 504
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
++I G HGFAE+ALS+F+ M + P+ + + VL ACSHAG+V++G F M
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISS--GFHPDGIALVAVLSACSHAGLVEKGREIFYSMS 562
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
G++P HY +VD+ GR G L+EA E +++MP+ P V LL++C +H D
Sbjct: 563 KRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVD-- 620
Query: 401 GIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
I + + +L ++EP R G+ ++++N+Y+ G WE +ANVR + + +KK++G S +++
Sbjct: 621 -IAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679
Query: 461 GGSMIRFFAGYDSRPDLIPVYHLLDGLNLHL 491
+F +G + + +Y +L+ L H+
Sbjct: 680 KKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 198/469 (42%), Gaps = 85/469 (18%)
Query: 7 SNKNQCL-----SLLNLCRSIDQLHQIQAQFHIHGH-YHNTYLLSELVYVCS----LSPS 56
SN +Q L LL LC + Q Q+ AQ + + + L + L+ V + L +
Sbjct: 49 SNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDA 108
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
+N+ LVL S WN +++ + A+ ++R MR+RG+ + P +L
Sbjct: 109 RNVFETVSLVLLSDLRL---WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLIL 165
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
+ C + H ++ GL +++V N L+ Y + ++ DA +F EMP R +
Sbjct: 166 RACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM 225
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETS------------------------ 212
SWN +I + V+ F M+ F+PDE +
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 213 -----------MVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ + S CAEL LS+ VH V+ G AL+ +YGK G +
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKV 345
Query: 262 GYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE-NHD-NIRPNYVTYLGV 319
A +F ++ + + +W+++I G +EALSLF + E NH N++ N VT+ V
Sbjct: 346 KDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSV 405
Query: 320 LCACSHAGMVDEGYRYFREMEY----------------------------VHG--IKPLM 349
+ C+ G D+ YFR+M++ +HG I+ M
Sbjct: 406 IKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSM 465
Query: 350 VH----YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
A+V++Y + GLL E +++ + D I W +++ +H
Sbjct: 466 SENILVQNALVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYGMH 513
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 233/438 (53%), Gaps = 15/438 (3%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ AR++ + S I+W ++ G+ ++ +A +F M E+ ++++ +L
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMG 243
Query: 119 CAVGSALREGKQV-HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
+ + +++ VK V N +I+ G+ +I AR+VFD M ER S
Sbjct: 244 YVQNGRIEDAEELFEVMPVK-----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W +VI N + + ++ F+ M+ G P +++ +LS CA L L G+ VH Q+V
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ + + L+ MY K G L ++L+F+R ++++ W+++I G A HG EEAL
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALK 418
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
+F M + + +PN VT++ L ACS+AGMV+EG + + ME V G+KP+ HY MVD
Sbjct: 419 VFCEMPLS-GSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR 417
+ GRAG EA E I SM V PD VW +LL AC H D + + K+L+ +EP
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD---VAEFCAKKLIEIEPEN 534
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFF-AGYDSRPD 476
G ++++N+YA G W A +R++M+ ++K G S ++ + F G +S P+
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 477 LIPVYHLLDGLNLHLKMA 494
+ +LD L+ L+ A
Sbjct: 595 QESILKILDELDGLLREA 612
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 14/275 (5%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNK 109
+ L + AR++ + SW +I+ + +EA+ +F M+++GV+P
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE 169
T +L CA ++L GKQVHA V+ D DVYV + L+ Y +C +++ ++ +FD
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 170 MPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSL 228
P + + WNS+I+ + + ++ F +M SG +P+E + V LSAC+ G +
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 229 GRWVHCQVVLRGMVLSCQLGTA----LVDMYGKSGALGYARLVFERME-KRNVLTWSAMI 283
G ++ + V + TA +VDM G++G A + + M + + W +++
Sbjct: 452 GLKIYESM---ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRP-NYVTYL 317
H L + E ++ I P N TY+
Sbjct: 509 GACRTHS----QLDVAEFCAKKLIEIEPENSGTYI 539
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 69/356 (19%)
Query: 48 VYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
V + LS + ARKL + S SWN ++ G+ + P +A +F +M +R
Sbjct: 22 VRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR---- 77
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
++ N L++ Y + +I +ARKVF
Sbjct: 78 -----------------------------------NIISWNGLVSGYMKNGEIDEARKVF 102
Query: 168 DEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS 227
D MPER VSW +++ V N + F KM E ++ S +ML +G+L
Sbjct: 103 DLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVML-----IGFLQ 153
Query: 228 LGRWVHCQVVLRGMVLSCQ--LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILG 285
GR + L M+ T+++ K G + AR +F+ M +R+V+TW+ M+ G
Sbjct: 154 DGR-IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG 212
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI 345
Q+ ++A +F++M E + V++ +L G +++ F M +
Sbjct: 213 YGQNNRVDDARKIFDVMPEKTE------VSWTSMLMGYVQNGRIEDAEELFEVMP----V 262
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTG 401
KP+ + AM+ G+ G + +A SM D W+T++ H+R G
Sbjct: 263 KPV-IACNAMISGLGQKGEIAKARRVFDSMKERNDA-SWQTVIK------IHERNG 310
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 146 VGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
N I R KI +ARK+FD ++ SWNS++ NL RD + F +M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 206 FEPDET--SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
PD S ++S + G + R V + R +V TALV Y +G +
Sbjct: 75 --PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDV 128
Query: 264 ARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
A +F +M ++N ++W+ M++G Q G ++A L+EM+ + DNI + + LC
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK-DNI--ARTSMIHGLC-- 183
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIV 383
G VDE F EM + ++ + MV YG+ + +A + MP + +
Sbjct: 184 -KEGRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE-VS 236
Query: 384 WRTLL 388
W ++L
Sbjct: 237 WTSML 241
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 216/383 (56%), Gaps = 7/383 (1%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
+WN +++G+ ++ I +FRK++ G++ + + ++ C+ A+ GK +H
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
VK LD + V N+LI+ YG+ + A ++F E + ++WN++I + V +
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAI 518
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
F +M F+P ++V +L AC G L G+ +H + ++ L AL+DMY
Sbjct: 519 ALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMY 578
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
K G L +R +F+ +++ + W+ MI G HG E A++LF+ M E+ +++P T
Sbjct: 579 AKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES--DVKPTGPT 636
Query: 316 YLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
+L +L AC+HAG+V++G + F +M + + +KP + HY +VD+ R+G L EA + SM
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Query: 376 PVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWE 435
P +PD ++W TLLS+C H + +G ++ + + +P+ G +++AN+Y+ AG WE
Sbjct: 696 PFSPDGVIWGTLLSSCMTHGEFE---MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWE 752
Query: 436 RAANVRRVMRDGGMKKMAGESCV 458
A R +MR+ G+ K AG S V
Sbjct: 753 EAERAREMMRESGVGKRAGHSVV 775
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 11/373 (2%)
Query: 21 SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPIS-WNI 79
S++ L + A G N ++ S+L+ + NL+ V H T I WN
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLS---SRVFHLVTRRDIFLWNS 95
Query: 80 LIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFG 139
+I+ ++ ++ F M G P+ T P ++ CA G VH +K G
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 140 -LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYF 198
D + VG + + FY +C + DA VFDEMP+R V+W ++I+ V+N G+ Y
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 199 LKMRGSGFE---PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
KM +G + P+ ++ AC+ LG L GR +H V G+ S + +++ Y
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
KSG A L F + ++ +W+++I LA+ G EE+ +F M + + P+ V
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM--QNKGMHPDGVV 333
Query: 316 YLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
++ +V +G + F H +++ +Y + LL A + +
Sbjct: 334 ISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI 392
Query: 376 PVNPDPIVWRTLL 388
+ W T+L
Sbjct: 393 SEEGNKEAWNTML 405
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 4/274 (1%)
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
C +L ++ +A + GL +++V + LI+ Y K + +VF + R W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
NS+I A N + +F M SG PD + +++SACAEL + +G +VH V+
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 239 R-GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
G + +G + V Y K G L A LVF+ M R+V+ W+A+I G Q+G +E L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 298 -LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
L +M S D +PN T ACS+ G + EG R +G+ +M
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMF 272
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
Y ++G EAY + + + D W +++++
Sbjct: 273 SFYSKSGNPSEAYLSFRELG-DEDMFSWTSIIAS 305
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 159/378 (42%), Gaps = 15/378 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGV---KPNKLTFPFLLKCCAVGSALREGKQV 131
++W +I G + + KM G KPN T + C+ AL+EG+ +
Sbjct: 193 VAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H AVK GL S +V +++ +FY + +A F E+ + SW S+I + + +
Sbjct: 253 HGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDM 312
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+ + F +M+ G PD + +++ ++ + G+ H V+ L + +L
Sbjct: 313 EESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSL 372
Query: 252 VDMYGKSGALGYARLVFERM-EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+ MY K L A +F R+ E+ N W+ M+ G + + + LF + + I
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI--QNLGIE 430
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
+ + V+ +CSH G V G + + + +++D+YG+ G L A+
Sbjct: 431 IDSASATSVISSCSHIGAVLLG-KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA- 429
N I W ++ A VH I R ++ E + ++ +V L A
Sbjct: 490 MFCEADTN--VITWNAMI-ASYVHCEQSEKAIALFDR---MVSENFKPSSITLVTLLMAC 543
Query: 430 -EAGMWERAANVRRVMRD 446
G ER + R + +
Sbjct: 544 VNTGSLERGQMIHRYITE 561
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
A + I+WN +I + + +AI +F +M KP+ +T LL C +L G+
Sbjct: 494 ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQ 553
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
+H + + ++ + LI+ Y +C + +R++FD ++ V WN +I+ +
Sbjct: 554 MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG 613
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ + F +M S +P + + +LSAC G + G+ + ++ + + + +
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYS 673
Query: 250 ALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFE 300
LVD+ +SG L A M + + W ++ HG E + + E
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAE 725
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 7/175 (4%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+L +R+L + WN++I G+ AI +F +M E VKP TF LL
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPV 176
C + +GK++ ++ + ++ + L++ R + +A MP V
Sbjct: 643 ACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGV 702
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
W +++++C+ + G+ + R +P +ML+ Y + G+W
Sbjct: 703 IWGTLLSSCMTHGEFEMGIR--MAERAVASDPQNDGYYIMLANM----YSAAGKW 751
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 243/513 (47%), Gaps = 68/513 (13%)
Query: 43 LLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRE 102
L+++ + C+ K L A + P+ +N L +GF T PI ++ ++ +M
Sbjct: 807 LMNQFITACT--SFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 103 RGVKPN--------------------------KLTFPF-------LLKCCAVGSALREGK 129
V P+ K F F L+ + +RE +
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREAR 924
Query: 130 QVHAD--------------AVKFGLDSDVY-------------VGNNLINFYGRCKKILD 162
+V + A + LD D N LIN Y +
Sbjct: 925 KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQ 984
Query: 163 ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
A +F++MP + +SW ++I +N R+ + F KM G PDE +M ++SACA
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
LG L +G+ VH + G VL +G+ALVDMY K G+L A LVF + K+N+ W+++
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV 342
I GLA HGFA+EAL +F M ++++PN VT++ V AC+HAG+VDEG R +R M
Sbjct: 1105 IEGLAAHGFAQEALKMFAKM--EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGI 402
+ I + HYG MV ++ +AGL+ EA E I +M P+ ++W LL C + H I
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI---HKNLVI 1219
Query: 403 GDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKM-AGESCVDLG 461
+ +L+++EP G ++ ++YAE W A +R MR+ G++K+ G S + +
Sbjct: 1220 AEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1279
Query: 462 GSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
F A S V LLD + + +A
Sbjct: 1280 KRDHLFAAADKSHSASDEVCLLLDEIYDQMGLA 1312
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 136/332 (40%), Gaps = 33/332 (9%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
++K C+ L A +K L+ D + N I K++ A +M E
Sbjct: 779 IIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
+N++ V +E +++M P + ++ A + G +
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQA 893
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ G ++ T L+D Y +G + AR VF+ M +R+ + W+ M+ + +
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 295 ALSLFEMMSENHDNIRPNYVT-YLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
A SL MSE ++ + Y+G+ G +++ F +M +K + + +
Sbjct: 954 ANSLANQMSEKNEATSNCLINGYMGL-------GNLEQAESLFNQMP----VKDI-ISWT 1001
Query: 354 AMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKEL 410
M+ Y + REA M + PD + T++SAC AH G+ + + KE+
Sbjct: 1002 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC----AH--LGVLE-IGKEV 1054
Query: 411 LLVEPRRGGNLVI-----VANLYAEAGMWERA 437
+ + G L + + ++Y++ G ERA
Sbjct: 1055 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 239/445 (53%), Gaps = 19/445 (4%)
Query: 61 HARKLVLHSATP-SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCC 119
A K V H + + +SW +I S + +A+ +F MR GV PN++TF L+
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
++EG ++H +K G S+ VGN+ I Y + + + DA+K F+++ R +SWN
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWN 442
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++I+ +N + + ++ FL P+E + +L+A A +S+ + C L
Sbjct: 443 AMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501
Query: 240 GMVL-SCQL-GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ L SC + +AL+DMY K G + + VF M ++N W+++I + HG E ++
Sbjct: 502 KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMN 561
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
LF M + +N+ P+ VT+L VL AC+ GMVD+GY F M V+ ++P HY MVD
Sbjct: 562 LFHKMIK--ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 358 IYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR 417
+ GRAG L+EA E + +P P + +++L +C + H +G KV + + ++P
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRL---HGNVKMGAKVAELAMEMKPEL 676
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGG-----SMIRFFAGYD 472
G+ V + N+YAE W++AA +R+ MR + K AG S +D+G +M F +G
Sbjct: 677 SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDK 736
Query: 473 SRPDLIPVYHLLDGLNLHLKMANEL 497
S P +Y +++ + L + + ++
Sbjct: 737 SHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 184/361 (50%), Gaps = 17/361 (4%)
Query: 41 TYLLSELV----YVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDS-PIEAIW 95
T L S+LV ++ S S + AR++ + ISWN L+ G + + EA+
Sbjct: 203 TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVV 262
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
+FR M GV+ + ++F ++ C + L+ +Q+H +K G +S + VGN L++ Y
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYS 322
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
+C + + VF +M ER VSW ++I++ + D V FL MR G P+E + V
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVG 377
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
+++A + G +H + G V +G + + +Y K AL A+ FE + R
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG--MVDEGY 333
+++W+AMI G AQ+GF+ EAL +F +S + + PN T+ VL A + A V +G
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMF--LSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSV 393
R + + G+ V A++D+Y + G + E+ + M + VW +++SA S
Sbjct: 495 RCHAHLLKL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSS 552
Query: 394 H 394
H
Sbjct: 553 H 553
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 25/326 (7%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P +SWN ++ GF D+ I +V R M+ GV + T+ L C G Q+
Sbjct: 140 PDVVSWNTILSGF--DDNQIALNFVVR-MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA-CVENLW 190
+ VK GL+SD+ VGN+ I Y R AR+VFDEM + +SWNS+++ E +
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ V F M G E D S +++ C L L R +H + RG ++G
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+ Y K G L + VF +M +RNV++W+ MI ++A+S+F ++ D +
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIF--LNMRFDGVY 369
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHG--IKPLMVHY----GAMVDIYGRAGL 364
PN VT++G++ A + EG + +HG IK V + + +Y +
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLK-------IHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSA 390
L +A + + + + I W ++S
Sbjct: 423 LEDAKKAFEDITFR-EIISWNAMISG 447
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 147/308 (47%), Gaps = 15/308 (4%)
Query: 88 DSPIEAIWVFRKMRERGV---KPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDV 144
+SP A+ +F++ + G +++T LK C L+ G Q+H + G S V
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFV 111
Query: 145 YVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGS 204
V N ++ Y + + +A +F+ + + VSWN++++ +N + + + ++M+ +
Sbjct: 112 CVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSA 168
Query: 205 GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYA 264
G D + LS C LG + VV G+ +G + + MY +SG+ A
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 265 RLVFERMEKRNVLTWSAMILGLAQHG-FAEEALSLF-EMMSENHDNIRPNYVTYLGVLCA 322
R VF+ M +++++W++++ GL+Q G F EA+ +F +MM E + ++V++ V+
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE---GVELDHVSFTSVITT 285
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPI 382
C H + R + G + L+ ++ Y + G+L M + +
Sbjct: 286 CCHETDLKLA-RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVV 343
Query: 383 VWRTLLSA 390
W T++S+
Sbjct: 344 SWTTMISS 351
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 229/453 (50%), Gaps = 49/453 (10%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N A K+ P S+N++I G+A +EA+ ++ KM G++P++ T LL
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 118 CCAVGSALREGKQVHADAVKFG--LDSDVYVGNNLINFYGRCK------KILDARK---- 165
CC S +R GK VH + G S++ + N L++ Y +CK + DA K
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 166 ---------------------VFDEMPERTPVSWNSVI-----TACVENLWLRDGVEYFL 199
VFD+MP+R VSWNS++ C + R E F
Sbjct: 301 RSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ----RTVRELFY 356
Query: 200 KMR-GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKS 258
+M +PD +MV ++S A G LS GRWVH V+ + L +AL+DMY K
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 259 GALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLG 318
G + A +VF+ +++V W++MI GLA HG ++AL LF M E + + PN VT L
Sbjct: 417 GIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE--EGVTPNNVTLLA 474
Query: 319 VLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ-SMPV 377
VL ACSH+G+V+EG F M+ G P HYG++VD+ RAG + EA + +Q MP+
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPM 534
Query: 378 NPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERA 437
P +W ++LSAC + + ELL +EP + G V+++N+YA G W +
Sbjct: 535 RPSQSMWGSILSACR---GGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYS 591
Query: 438 ANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAG 470
R M + G+KK AG S V + RF A
Sbjct: 592 DKTREAMENRGVKKTAGYSSVVGVEGLHRFVAA 624
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 200/433 (46%), Gaps = 54/433 (12%)
Query: 3 TRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHA 62
+SL +Q L LL C S +Q Q+ AQ +T+ +S L++ +++ +NL A
Sbjct: 28 VQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLA 87
Query: 63 RKLVLH-SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
+ L L+ + P+ +N +I A S S E ++ M V P++ TF +L+K
Sbjct: 88 KLLFLNFTPNPNVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMK---A 142
Query: 122 GSALREGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
S L E KQ+H + G L Y+ N+L+ FY A KVF MP S+N
Sbjct: 143 SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+I + + + ++ + KM G EPDE +++ +L C L + LG+ VH + RG
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG 262
Query: 241 MVLSCQ--LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
V S L AL+DMY K G A+ F+ M+K+++ +W+ M++G + G E A ++
Sbjct: 263 PVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 299 FEMMSENH-------------------------------DNIRPNYVTYLGVLCACSHAG 327
F+ M + + ++P+ VT + ++ ++ G
Sbjct: 323 FDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNG 382
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYG------AMVDIYGRAGLLREAYEFIQSMPVNPDP 381
+ G +VHG+ + G A++D+Y + G++ A+ ++ D
Sbjct: 383 ELSHG-------RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDV 434
Query: 382 IVWRTLLSACSVH 394
+W ++++ + H
Sbjct: 435 ALWTSMITGLAFH 447
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 225/397 (56%), Gaps = 15/397 (3%)
Query: 75 ISWNILIRGFA-TSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
ISWN +I G+A TSD A +F M E+ + +++ ++ + + K +
Sbjct: 221 ISWNSMISGYAQTSDGVDIASKLFADMPEKDL----ISWNSMIDGYVKHGRIEDAKGLFD 276
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
+ DV +I+ Y + + A+ +FD+MP R V++NS++ V+N + +
Sbjct: 277 VMPR----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHME 332
Query: 194 GVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
+E F M + S PD+T++V++L A A+LG LS +H +V + L +LG AL+
Sbjct: 333 ALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALI 392
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K G++ +A LVFE +E +++ W+AMI GLA HG E A + ++ +++P+
Sbjct: 393 DMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM--LLQIERLSLKPD 450
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
+T++GVL ACSH+G+V EG F M H I+P + HYG MVDI R+G + A I
Sbjct: 451 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 510
Query: 373 QSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAG 432
+ MPV P+ ++WRT L+ACS H + G+ V K L+L + V+++N+YA G
Sbjct: 511 EEMPVEPNDVIWRTFLTACSHHKEFE---TGELVAKHLILQAGYNPSSYVLLSNMYASFG 567
Query: 433 MWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
MW+ VR +M++ ++K+ G S ++L G + FF
Sbjct: 568 MWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 201/450 (44%), Gaps = 64/450 (14%)
Query: 10 NQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS 69
+ + +L C++ D ++QI + G N+ L + +V + S L + V H
Sbjct: 13 SSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHE 72
Query: 70 ---------ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
P WN +I+ + P +A+ + M E GV +K + +LK C+
Sbjct: 73 YHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 132
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
++ G Q+H K GL SD+++ N LI Y +C + +R++FD MP+R VS+NS
Sbjct: 133 RLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNS 192
Query: 181 VITACV-------------------ENL--W---------LRDGVEYFLKMRGSGFEPDE 210
+I V +NL W DGV+ K+ E D
Sbjct: 193 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL 252
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER 270
S M+ + G + + + + R +V ++D Y K G + +A+ +F++
Sbjct: 253 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV----TWATMIDGYAKLGFVHHAKTLFDQ 308
Query: 271 MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVD 330
M R+V+ +++M+ G Q+ + EAL +F M E ++ P+ T + VL A + G +
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDM-EKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 331 EG---YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQSMPVNPDPIVW 384
+ + Y E ++ G K + A++D+Y + G ++ A +E I++ ++ W
Sbjct: 368 KAIDMHLYIVEKQFYLGGKLGV----ALIDMYSKCGSIQHAMLVFEGIENKSIDH----W 419
Query: 385 RTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
++ ++H G+G+ LL +E
Sbjct: 420 NAMIGGLAIH------GLGESAFDMLLQIE 443
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 7/234 (2%)
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCC 119
HA+ L +++N ++ G+ + +EA+ +F M +E + P+ T +L
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
A L + +H V+ +G LI+ Y +C I A VF+ + ++ WN
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++I + + L++ +PD+ + V +L+AC+ G + G + C ++R
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG--LLCFELMR 478
Query: 240 ---GMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQH 289
+ Q +VD+ +SG++ A+ + E M + N + W + + H
Sbjct: 479 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHH 532
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 192/326 (58%), Gaps = 9/326 (2%)
Query: 163 ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG-SGFEPDETSMVLMLSACA 221
A+KV ++ ++WN +I V N+ + ++ M + +P++ S L+ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
LG L +WVH ++ G+ L+ L +ALVD+Y K G +G +R VF +++ +V W+A
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY 341
MI G A HG A EA+ +F M H + P+ +T+LG+L CSH G+++EG YF M
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEH--VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTG 401
I+P + HYGAMVD+ GRAG ++EAYE I+SMP+ PD ++WR+LLS+ + +
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPE--- 351
Query: 402 IGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLG 461
+G+ + L + G+ V+++N+Y+ WE A VR +M G++K G+S ++ G
Sbjct: 352 LGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFG 408
Query: 462 GSMIRFFAGYDSRPDLIPVYHLLDGL 487
G + RF AG S + +Y +L+GL
Sbjct: 409 GMIHRFKAGDTSHIETKAIYKVLEGL 434
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRE-RGVKPNKLTFPFLLKCCA 120
A+K++ +++ + I+WN++I G+ + EA+ + M +KPNK +F L CA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
L K VH+ + G++ + + + L++ Y +C I +R+VF + WN+
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+IT + + + F +M PD + + +L+ C+ G L G+ + ++ R
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGK-EYFGLMSRR 295
Query: 241 MVLSCQLG--TALVDMYGKSGALGYARLVFERME-KRNVLTWSAMI 283
+ +L A+VD+ G++G + A + E M + +V+ W +++
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+++ K G G A+ V +NV+TW+ MI G ++ EEAL + M D I+
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD-IK 162
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
PN ++ L AC+ G + ++ + GI+ + A+VD+Y + G + + E
Sbjct: 163 PNKFSFASSLAACARLGDLHHA-KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 371 FIQSMPVNPDPIVWRTLLSACSVH 394
S+ N D +W +++ + H
Sbjct: 222 VFYSVKRN-DVSIWNAMITGFATH 244
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 252/471 (53%), Gaps = 34/471 (7%)
Query: 13 LSLLNL-CRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS-- 69
LSLL +++ Q QI AQ I+G + N+ + + CS +++ + L++
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRF 70
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG--VKPNKLTFPFLL---KCCAVGSA 124
P +N L++ P ++I +F + + N+ TF F+L A SA
Sbjct: 71 GHPDKFLFNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSA 126
Query: 125 LREGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
LR G+ VH K G L +G L++FY + + ARKVFDEMPERT V+WN++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 184 ACVE-----NLWLRDGVEYFLKMR--GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
N R + F + GSG P +T+MV +LSA ++ G L +G VH +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 237 VLRGMV--LSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
G + +GTALVDMY K G L A VFE M+ +NV TW++M GLA +G E
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
+L M+E+ I+PN +T+ +L A H G+V+EG F+ M+ G+ P++ HYG
Sbjct: 307 TPNLLNRMAES--GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
+VD+ G+AG ++EAY+FI +MP+ PD I+ R+L +ACS+ + T +G+++ K LL +E
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSI---YGETVMGEEIGKALLEIE 421
Query: 415 ---PRRGG----NLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCV 458
+ G + V ++N+ A G W +R+ M++ +K G S V
Sbjct: 422 REDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 250/478 (52%), Gaps = 19/478 (3%)
Query: 21 SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSATPSPIS 76
++ L Q++ HG + +V V SL S ++ + + L +S
Sbjct: 327 AVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS 386
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
WN +I F + E + + +M+++G K + +T LL + GKQ HA +
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 137 KFGLDSDVYVGNN--LINFYGRCKKILDARKVFDE--MPERTPVSWNSVITACVENLWLR 192
+ G+ + G N LI+ Y + I ++K+F+ ER +WNS+I+ +N
Sbjct: 447 RQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
F KM P+ ++ +L AC+++G + LG+ +H + + + + + +ALV
Sbjct: 504 KTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALV 563
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K+GA+ YA +F + ++RN +T++ MILG QHG E A+SLF M E+ I+P+
Sbjct: 564 DMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES--GIKPD 621
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
+T++ VL ACS++G++DEG + F EM V+ I+P HY + D+ GR G + EAYEF+
Sbjct: 622 AITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV 681
Query: 373 QSMPVNPD-PIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRR--GGNLVIVANLYA 429
+ + + +W +LL +C +H + + + V + L + + G V+++N+YA
Sbjct: 682 KGLGEEGNIAELWGSLLGSCKLHGELE---LAETVSERLAKFDKGKNFSGYEVLLSNMYA 738
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
E W+ VRR MR+ G+KK G S +++ G + F + P +Y ++DGL
Sbjct: 739 EEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 32/354 (9%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
RK+ + + ++WN LI + + EA F M VKP+ ++F + ++
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 123 SALREGKQVHADAVKFGLD--SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
++++ + +K G + D++V ++ I+ Y I +R+VFD ER WN+
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 181 VITACVENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+I V+N L + +E FL+ GS DE + +L SA + L + LGR H V
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL- 298
L + +L+ MY + G++ + VF M +R+V++W+ MI Q+G +E L L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACS-----------HAGMVDEGYRYFREMEYVHGIKP 347
+EM + + +Y+T +L A S HA ++ +G ++ Y
Sbjct: 408 YEMQKQ---GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY------ 458
Query: 348 LMVHYGAMVDIYGRAGLLREAYEFIQ-SMPVNPDPIVWRTLLSACSVHDAHDRT 400
++D+Y ++GL+R + + + S D W +++S + + ++T
Sbjct: 459 -------LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPN--KLTFPFLLKCC 119
AR+L P+ + WN +I GF ++ P EA+ + +M++ N T+ LK C
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILD------ARKVFDEMPER 173
A L+ GK VH ++ +S V N+L+N Y C D RKVFD M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
V+WN++I+ V+ + F M +P S V + A +S+ R +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA------VSISRSIK 231
Query: 234 CQVVLRGMVLSCQLG----------TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMI 283
V G++L +LG ++ + MY + G + +R VF+ +RN+ W+ MI
Sbjct: 232 KANVFYGLML--KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY-------F 336
Q+ E++ LF + + I + VTYL A S V+ G ++ F
Sbjct: 290 GVYVQNDCLVESIELF-LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 337 REMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDA 396
RE+ P+++ MV +Y R G + +++ SM D + W T++SA V +
Sbjct: 349 REL-------PIVIVNSLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAF-VQNG 398
Query: 397 HDRTGI 402
D G+
Sbjct: 399 LDDEGL 404
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 242/475 (50%), Gaps = 14/475 (2%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYL-LSELVYVCSLSPSKNLTHARKLVLHSATPS 73
L+ L R +H + + +Y + L L EL C L+ ++ + +
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG-----KLSDCETVLRVVSDRN 369
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++WN LI +A I+A+ +FR+M + +KP+ T + C + GKQ+H
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG 429
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
++ + SD +V N+LI+ Y + + A VF+++ R+ V+WNS++ +N +
Sbjct: 430 HVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+ F M S E +E + + ++ AC+ +G L G+WVH ++++ G+ TAL+D
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALID 547
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY K G L A VF M R++++WS+MI HG A+S F M E+ +PN
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES--GTKPNE 605
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
V ++ VL AC H+G V+EG YF M+ G+ P H+ +D+ R+G L+EAY I+
Sbjct: 606 VVFMNVLSACGHSGSVEEGKYYFNLMKSF-GVSPNSEHFACFIDLLSRSGDLKEAYRTIK 664
Query: 374 SMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
MP D VW +L++ C +H D I ++ +L + G +++N+YAE G
Sbjct: 665 EMPFLADASVWGSLVNGCRIHQKMD---IIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGE 721
Query: 434 WERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLN 488
WE +R M+ +KK+ G S +++ + RF AG ++R +Y L L
Sbjct: 722 WEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQ 776
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 195/396 (49%), Gaps = 35/396 (8%)
Query: 10 NQCLSLLNLCRSIDQLHQIQAQFHIHGHYHN-----TYLLSELVYVCSLSPSKNLTHARK 64
Q + L C S+ + Q+ A + G T L+ ++ S S+
Sbjct: 2 TQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSR------- 54
Query: 65 LVLHSATPSPIS--WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
++ A P P S + +LI+ AI ++ ++ + +K FP +L+ CA G
Sbjct: 55 -LVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA-G 112
Query: 123 SA--LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
S L G +VH +K G+D D + +L+ YG+ + DA KVFD MP R V+W++
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
++++C+EN + + F M G EPD +M+ ++ CAELG L + R VH Q+ +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
L L +L+ MY K G L + +FE++ K+N ++W+AMI + F+E+AL F
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI---KPLMVHYG---- 353
M ++ I PN VT VL +C G++ EG + VHG + L +Y
Sbjct: 293 EMIKS--GIEPNLVTLYSVLSSCGLIGLIREG-------KSVHGFAVRRELDPNYESLSL 343
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
A+V++Y G L + E + + + + + W +L+S
Sbjct: 344 ALVELYAECGKLSDC-ETVLRVVSDRNIVAWNSLIS 378
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 223/417 (53%), Gaps = 18/417 (4%)
Query: 84 FATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSD 143
FA ++ P ++ +KM ++P+ P K CA+ S G+ VH ++K G D+D
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 144 VYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV------ENLWLRDGVEY 197
V+VG++L++ Y +C +I+ ARK+FDEMP+R V+W+ ++ E LWL
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWL------ 204
Query: 198 FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK 257
F + ++ S ++S CA L LGR +H + S +G++LV +Y K
Sbjct: 205 FKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSK 264
Query: 258 SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYL 317
G A VF + +N+ W+AM+ AQH ++ + LF+ M + ++PN++T+L
Sbjct: 265 CGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS--GMKPNFITFL 322
Query: 318 GVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPV 377
VL ACSHAG+VDEG YF +M+ I+P HY ++VD+ GRAG L+EA E I +MP+
Sbjct: 323 NVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPI 381
Query: 378 NPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERA 437
+P VW LL++C+V H T + ++ + P G + ++N YA G +E A
Sbjct: 382 DPTESVWGALLTSCTV---HKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDA 438
Query: 438 ANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMA 494
A R+++RD G KK G S V+ + F AG +Y L L ++ A
Sbjct: 439 AKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKA 495
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 140/268 (52%), Gaps = 4/268 (1%)
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
+G Q+H VK GL V NNLINFY + + D+R+ F++ P+++ +W+S+I+
Sbjct: 33 KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+N +E+ KM PD+ + +CA L +GR VHC + G
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
+G++LVDMY K G + YAR +F+ M +RNV+TWS M+ G AQ G EEAL LF+
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK--EALF 210
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+N+ N ++ V+ C+++ +++ G R + ++V +Y + G+
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVH 394
AY+ +PV + +W +L A + H
Sbjct: 270 GAYQVFNEVPVK-NLGIWNAMLKAYAQH 296
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 123/238 (51%), Gaps = 1/238 (0%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ +ARK+ + ++W+ ++ G+A EA+W+F++ + N +F ++
Sbjct: 167 IVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISV 226
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA + L G+Q+H ++K DS +VG++L++ Y +C A +VF+E+P + W
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N+++ A ++ + +E F +M+ SG +P+ + + +L+AC+ G + GR+ Q+
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE 346
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLT-WSAMILGLAQHGFAEEA 295
+ + + +LVDM G++G L A V M + W A++ H E A
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 227/429 (52%), Gaps = 46/429 (10%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+A+ +F KM ER + +++ +L LR+ +++ + + D+ N ++
Sbjct: 172 DAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQ----RDLISWNTML 223
Query: 152 NFYGRCKKILDARKVFDEMPERTPVSWNS------------------------------- 180
+ Y RC+++ A ++F++MPER VSW++
Sbjct: 224 DGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
Query: 181 --VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
+I E L++ +M SG + D +++ +L+AC E G LSLG +H +
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKR 343
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
+ + + AL+DMY K G L A VF + K+++++W+ M+ GL HG +EA+ L
Sbjct: 344 SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F M + IRP+ VT++ VLC+C+HAG++DEG YF ME V+ + P + HYG +VD+
Sbjct: 404 FSRM--RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRG 418
GR G L+EA + +Q+MP+ P+ ++W LL AC +H+ D I +V L+ ++P
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVD---IAKEVLDNLVKLDPCDP 518
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLI 478
GN +++N+YA A WE A++R M+ G++K +G S V+L + F S P
Sbjct: 519 GNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSD 578
Query: 479 PVYHLLDGL 487
+Y +L L
Sbjct: 579 QIYQMLGSL 587
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 204/404 (50%), Gaps = 23/404 (5%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
L L C +++Q+ Q+ AQ + + ++ +L+ SL NL A ++ P
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEP 80
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+ N LIR A + P +A +VF +M+ G+ + T+PFLLK C+ S L K +H
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCK--KILDARKVFDEMPERTPVSWNSVITACVENLW 190
K GL SD+YV N LI+ Y RC + DA K+F++M ER VSWNS++ V+
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
LRD F +M + D S ML A +S + ++ R V +
Sbjct: 201 LRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV----SWST 252
Query: 251 LVDMYGKSGALGYARLVFERM--EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
+V Y K+G + AR++F++M +NV+TW+ +I G A+ G +EA L + M +
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS--G 310
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH-GIKPLMVHYGAMVDIYGRAGLLRE 367
++ + + +L AC+ +G++ G R ++ + G +++ A++D+Y + G L++
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLN--ALLDMYAKCGNLKK 368
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG--DKVRKE 409
A++ +P D + W T+L VH H + I ++R+E
Sbjct: 369 AFDVFNDIP-KKDLVSWNTMLHGLGVH-GHGKEAIELFSRMRRE 410
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 196/364 (53%), Gaps = 5/364 (1%)
Query: 104 GVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDA 163
G++ T+ LL+ C +GK++HA G + Y+ L+ Y + A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 164 RKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
+F + R + WN++I+ V+ ++G+ + MR + PD+ + + AC+ L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 224 GYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMI 283
L G+ H ++ R + + + +ALVDMY K + VF+++ RNV+TW+++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH 343
G HG E L FE M E + RPN VT+L VL AC+H G+VD+G+ +F M+ +
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKE--EGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 344 GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
GI+P HY AMVD GRAG L+EAYEF+ P P VW +LL AC + H +
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI---HGNVKLL 397
Query: 404 DKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGS 463
+ + L ++P GGN V+ AN YA G+ E A+ VRR M + G+KK G S ++L G
Sbjct: 398 ELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGE 457
Query: 464 MIRF 467
+ RF
Sbjct: 458 VHRF 461
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 156/336 (46%), Gaps = 20/336 (5%)
Query: 15 LLNLCRSIDQL---HQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSAT 71
LL C+ + +I AQ + G N YL +L+ + +LS +L A L
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG--DLQTAGILFRSLKI 171
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
I WN +I G+ E ++++ MR+ + P++ TF + + C+ L GK+
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
HA +K + S++ V + L++ Y +C D +VFD++ R ++W S+I+ + +
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR--GMVLSCQLGT 249
+ ++ F KM+ G P+ + +++L+AC G + G W H + R G+ Q
Sbjct: 292 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYA 350
Query: 250 ALVDMYGKSGALGYA-RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
A+VD G++G L A V + K + W +++ HG + L E+ +
Sbjct: 351 AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG----NVKLLELAATKFLE 406
Query: 309 IRP----NYVTYLGVLCACSHAGMVDEGYRYFREME 340
+ P NYV + +C G+ + + R+ME
Sbjct: 407 LDPTNGGNYVVFANGYASC---GLREAASKVRRKME 439
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
SG + + + ++L C + + G+ +H Q+ + G L+ L L+ +Y SG L
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 264 ARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
A ++F ++ R+++ W+AMI G Q G +E L ++ M +N I P+ T+ V AC
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN--RIVPDQYTFASVFRAC 219
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIV 383
S ++ G R M IK ++ A+VD+Y + + + + + I
Sbjct: 220 SALDRLEHGKRAHAVM-IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVIT 277
Query: 384 WRTLLSACSVH 394
W +L+S H
Sbjct: 278 WTSLISGYGYH 288
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 233/484 (48%), Gaps = 54/484 (11%)
Query: 11 QCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELV--YVCSLSPSKNLTHARKLVLH 68
+C ++ C+ DQ+H N Y + +V YV S L AR +
Sbjct: 94 KCGKPIDACKVFDQMH-----------LRNLYSWNNMVSGYV----KSGMLVRARVVFDS 138
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG 128
+SWN ++ G+A + EA+W +++ R G+K N+ +F LL C L+
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLN 198
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM------------------ 170
+Q H + G S+V + ++I+ Y +C ++ A++ FDEM
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 171 -------------PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLML 217
PE+ PVSW ++I V ++ F KM G +P++ + L
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 218 SACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNV 276
A A + L G+ +H ++ + + + ++L+DMY KSG+L + VF + K +
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 277 LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYF 336
+ W+ MI LAQHG +AL + + M + ++PN T + +L ACSH+G+V+EG R+F
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKF--RVQPNRTTLVVILNACSHSGLVEEGLRWF 436
Query: 337 REMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDA 396
M HGI P HY ++D+ GRAG +E I+ MP PD +W +L C +H
Sbjct: 437 ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Query: 397 HDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES 456
+ +G K EL+ ++P ++++++YA+ G WE +R VM+ + K S
Sbjct: 497 EE---LGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Query: 457 CVDL 460
+++
Sbjct: 554 WIEI 557
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 65/400 (16%)
Query: 80 LIRGFATSDSPIEAIWVFRKMRERGVK-PNKLTFPFLLKCCAVGSALREGKQVHADAVKF 138
L++ + S + W+ R ++ G K PN L L +G ++ GK + A V
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL-----IGMYMKCGKPIDACKVFD 106
Query: 139 GLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEY 197
+ ++Y NN+++ Y + ++ AR VFD MPER VSWN+++ ++ L + + +
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 198 FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK 257
+ + R SG + +E S +L+AC + L L R H QV++ G + + L +++D Y K
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 258 SGAL-----------------------GYARL--------VFERMEKRNVLTWSAMILGL 286
G + GYA+L +F M ++N ++W+A+I G
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 287 AQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHG-- 344
+ G AL LF M ++P T+ LCA + + G + +HG
Sbjct: 287 VRQGSGNRALDLFRKMIAL--GVKPEQFTFSSCLCASASIASLRHG-------KEIHGYM 337
Query: 345 ----IKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
++P + +++D+Y ++G L + + D + W T++SA + H
Sbjct: 338 IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH------ 391
Query: 401 GIGDKVRKEL-----LLVEPRRGGNLVIVANLYAEAGMWE 435
G+G K + L V+P R LV++ N + +G+ E
Sbjct: 392 GLGHKALRMLDDMIKFRVQPNR-TTLVVILNACSHSGLVE 430
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 226/436 (51%), Gaps = 43/436 (9%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
L++AR++ P+ ++N +I G+ E + + ++M G K + T +LK
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 119 C-AVGSALREGKQ----VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
+ GS + + VHA +K ++ D + L++ Y + K+ AR VF+ M +
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE 204
Query: 174 TPVSWNSVITACVENLWLRDGVEYF--------------------------------LKM 201
V S+I+ + ++ D E F + M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 202 RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ +GF P+ ++ ++ AC+ L +G+ VH Q++ G+ ++G++L+DMY K G +
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 262 GYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLC 321
AR VF++M+++NV +W++MI G ++G EEAL LF M E I PNYVT+LG L
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR--IEPNYVTFLGALS 382
Query: 322 ACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDP 381
ACSH+G+VD+GY F M+ + +KP M HY +VD+ GRAG L +A+EF ++MP PD
Sbjct: 383 ACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDS 442
Query: 382 IVWRTLLSACSVHDAHDRTGIGDKVRKELL-LVEPRRGGNLVIVANLYAEAGMWERAANV 440
+W LLS+C++H + I EL L +R G + ++N+YA W+ + +
Sbjct: 443 DIWAALLSSCNLHGNVELASIA---ASELFKLNADKRPGAYLALSNVYASNDKWDNVSKI 499
Query: 441 RRVMRDGGMKKMAGES 456
R VM+ + K G S
Sbjct: 500 REVMKRRRISKTIGRS 515
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 78/342 (22%)
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
A + GK++HAD +K G D+ + L+ + +C + AR+VFDE+P+ T ++N +I+
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL-----SLGRWVHCQVVL 238
+++ +++ + +M SG + D ++ ++L A G SL R VH +++
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
+ L L TALVD Y KSG L AR VFE M+ NV+ ++MI G GF E+A +
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 299 FEM------------------------------MSENHDNIRPNYVTYLGVLCACS---- 324
F +S PN T+ V+ ACS
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 325 -------HA------------------------GMVDEGYRYFREMEYVHGIKPLMVHYG 353
HA G +++ R F +M+ + + +
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-----EKNVFSWT 343
Query: 354 AMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSACS 392
+M+D YG+ G EA E M + P+ + + LSACS
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS 385
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 205/391 (52%), Gaps = 11/391 (2%)
Query: 75 ISWNILIRGFATSDSPIE-AIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
I+W +I G+ T D +E A+ + R M+ GV+PN +T L+ C + +GK +H
Sbjct: 285 ITWTCMINGY-TEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
AV+ + SD+ + +LI+ Y +CK++ +VF + W+++I CV+N + D
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSD 403
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+ F +MR EP+ ++ +L A A L L +HC + G + S T LV
Sbjct: 404 ALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVH 463
Query: 254 MYGKSGALGYARLVF----ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+Y K G L A +F E+ + ++V+ W A+I G HG AL +F M + +
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS--GV 521
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
PN +T+ L ACSH+G+V+EG FR M + HY +VD+ GRAG L EAY
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAY 581
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
I ++P P VW LL+AC H+ +G+ +L +EP GN V++AN+YA
Sbjct: 582 NLITTIPFEPTSTVWGALLAACV---THENVQLGEMAANKLFELEPENTGNYVLLANIYA 638
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
G W+ VR +M + G++K G S +++
Sbjct: 639 ALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 171/333 (51%), Gaps = 10/333 (3%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIH---GHYHNTYLLSELVYVCSLSPSKNLTH 61
+LS+ Q SLLN + + + +A H H G + ++LS L +L ++T+
Sbjct: 11 ALSSVKQYQSLLNHFAATQSISKTKA-LHCHVITGGRVSGHILSTLSVTYALCG--HITY 67
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVK--PNKLTFPFLLKCC 119
ARKL S +S+NI+IR + +AI VF +M GVK P+ T+PF+ K
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 120 AVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
+++ G VH ++ D YV N L+ Y K+ AR VFD M R +SWN
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWN 187
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++I+ N ++ D + F M + D ++V ML C L L +GR VH V +
Sbjct: 188 TMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
+ ++ ALV+MY K G + AR VF+RME+R+V+TW+ MI G + G E AL L
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
+M + +RPN VT ++ C A V++G
Sbjct: 308 RLM--QFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 19/334 (5%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
ISWN +I G+ + +A+ +F M V + T +L C L G+ VH
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ L + V N L+N Y +C ++ +AR VFD M R ++W +I E+ + +
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+E M+ G P+ ++ ++S C + ++ G+ +H V + + + T+L+ M
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K + VF K + WSA+I G Q+ +AL LF+ M +++ PN
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM--RREDVEPNIA 421
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVH------GIKPLMVHYGAMVDIYGRAGLLREA 368
T +L A +A + D R+ +H G + +V +Y + G L A
Sbjct: 422 TLNSLLPA--YAALAD-----LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 369 YEF---IQSMPVNPDPIVWRTLLSACSVH-DAHD 398
++ IQ + D ++W L+S +H D H+
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 217/412 (52%), Gaps = 10/412 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRER-GVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++WN++I +A + +A F+KM E+ G++P+ +T LL SA+ EG+ +H
Sbjct: 299 VAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAILEGRTIHG 354
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
A++ G + + LI+ YG C ++ A +FD M E+ +SWNS+I A V+N
Sbjct: 355 YAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS 414
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+E F ++ S PD T++ +L A AE LS GR +H +V + + +LV
Sbjct: 415 ALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY G L AR F + ++V++W+++I+ A HGF ++ LF M + N PN
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVN--PNK 532
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
T+ +L ACS +GMVDEG+ YF M+ +GI P + HYG M+D+ GR G A F++
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 374 SMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
MP P +W +LL+A H I + +++ +E G V++ N+YAEAG
Sbjct: 593 EMPFVPTARIWGSLLNASR---NHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGR 649
Query: 434 WERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLD 485
WE ++ +M G+ + + S V+ G F G S +Y +LD
Sbjct: 650 WEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 176/319 (55%), Gaps = 16/319 (5%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
WN++I+GF + IEA+ + +M GVK + T+PF++K A S+L EGK++HA +
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
K G SDVYV N+LI+ Y + DA KVF+EMPER VSWNS+I+ L L DG
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG---YLALGDGFS 214
Query: 197 ---YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL-RGMVLSCQLGTALV 252
F +M GF+PD S + L AC+ + +G+ +HC V R + T+++
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K G + YA +F M +RN++ W+ MI A++G +A F+ MSE + ++P+
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE-QNGLQPD 333
Query: 313 YVTYLGVLCACS-HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF 371
+T + +L A + G GY R G P MV A++D+YG G L+ A E
Sbjct: 334 VITSINLLPASAILEGRTIHGYAMRR------GFLPHMVLETALIDMYGECGQLKSA-EV 386
Query: 372 IQSMPVNPDPIVWRTLLSA 390
I + I W ++++A
Sbjct: 387 IFDRMAEKNVISWNSIIAA 405
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 170/325 (52%), Gaps = 16/325 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I G+ ++ +F++M + G KP++ + L C+ + + GK++H
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Query: 135 AVKFGLDS-DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
AV+ +++ DV V ++++ Y + ++ A ++F+ M +R V+WN +I N + D
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD 316
Query: 194 GVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
F KM +G +PD + + +L A A L GR +H + RG + L TAL+
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALI 372
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMYG+ G L A ++F+RM ++NV++W+++I Q+G AL LF+ + ++ ++ P+
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS--SLVPD 430
Query: 313 YVTYLGVLCACSHAGMVDEG---YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
T +L A + + + EG + Y + Y L ++V +Y G L +A
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL----NSLVHMYAMCGDLEDAR 486
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVH 394
+ + + D + W +++ A +VH
Sbjct: 487 KCFNHILL-KDVVSWNSIIMAYAVH 510
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 34 IHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDS 89
IHG+ L +V +L L A + A + ISWN +I + +
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 90 PIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNN 149
A+ +F+++ + + P+ T +L A +L EG+++HA VK S+ + N+
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS 471
Query: 150 LINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPD 209
L++ Y C + DARK F+ + + VSWNS+I A + + R V F +M S P+
Sbjct: 472 LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 210 ETSMVLMLSACAELGYLSLGRWVHCQVVLR--GMVLSCQLGTALVDMYGKSGALGYARLV 267
+++ +L+AC+ G + G W + + + R G+ + ++D+ G++G A+
Sbjct: 532 KSTFASLLAACSISGMVDEG-WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590
Query: 268 FERM 271
E M
Sbjct: 591 LEEM 594
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 39/285 (13%)
Query: 162 DARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
DA ++FDEM + WN +I + V+++ +M +G + D + ++ + A
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
+ L G+ +H V+ G V + +L+ +Y K G A VFE M +R++++W++
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHA--------------- 326
MI G G +L LF+ M + +P+ + + L ACSH
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKC--GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 327 GMVDEG-----------YRYFREMEYVHGIKPLMVH-----YGAMVDIYGRAGLLREAYE 370
++ G Y + E+ Y I M+ + M+ Y R G + +A+
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 371 FIQSMP----VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
Q M + PD I LL A ++ + RT G +R+ L
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAILEG--RTIHGYAMRRGFL 362
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 236/456 (51%), Gaps = 43/456 (9%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
IS +I F +EA F+++ G++PN+ TF ++ ++ GKQ+H
Sbjct: 59 ISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCY 118
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE------------------------- 169
A+K GL S+V+VG+ ++N Y + + DAR+ FD+
Sbjct: 119 ALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEA 178
Query: 170 ------MPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE-PDETSMVLMLSACAE 222
MPER+ V+WN+VI + + V F+ M G P+E++ ++A +
Sbjct: 179 LSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 238
Query: 223 LGYLSLGRWVH-CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME--KRNVLTW 279
+ G+ +H C + G + + +L+ Y K G + + L F ++E +RN+++W
Sbjct: 239 IASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSW 298
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
++MI G A +G EEA+++FE M ++ N+RPN VT LGVL AC+HAG++ EGY YF +
Sbjct: 299 NSMIWGYAHNGRGEEAVAMFEKMVKD-TNLRPNNVTILGVLFACNHAGLIQEGYMYFNKA 357
Query: 340 EYVHGIKPLMV--HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAH 397
+ L+ HY MVD+ R+G +EA E I+SMP++P W+ LL C + H
Sbjct: 358 VNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQI---H 414
Query: 398 DRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESC 457
+ ++L ++PR + V+++N Y+ W+ + +RR M++ G+K+ G S
Sbjct: 415 SNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSW 474
Query: 458 VDLGGSMIRFFAGYDSRPDLI-PVYHLLDGLNLHLK 492
+++ IR F D +L VY +L ++ HL+
Sbjct: 475 IEV-RDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 11/237 (4%)
Query: 65 LVLHSATP--SPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAV 121
L L A P S ++WN +I GF+ + EA+ F M RE V PN+ TFP + +
Sbjct: 179 LSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 238
Query: 122 GSALREGKQVHADAVKF-GLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE--RTPVSW 178
++ GK +HA A+KF G +V+V N+LI+FY +C + D+ F+++ E R VSW
Sbjct: 239 IASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSW 298
Query: 179 NSVITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
NS+I N + V F KM + + P+ +++ +L AC G + G + V
Sbjct: 299 NSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAV 358
Query: 238 L---RGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHG 290
+L + +VDM +SG A + + M + W A++ G H
Sbjct: 359 NDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHS 415
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 160 ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
I +A KVFDE+PE +S +VI V+ + + F ++ G P+E + ++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTW 279
+ LG+ +HC + G+ + +G+A+++ Y K L AR F+ NV++
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 280 SAMILG-LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFRE 338
+ +I G L +H F EEALSLF M E + VT+ V+ S G +E F +
Sbjct: 163 TNLISGYLKKHEF-EEALSLFRAMPER------SVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 339 M 339
M
Sbjct: 216 M 216
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 235/458 (51%), Gaps = 41/458 (8%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+T ISWN ++ FA S + + + + + + +T LLK C + + K
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 130 QVHADAVKFGL---DSDVYVGNNLINFYGRCKKILDARKVFDEMPER-TPVSWNSVITAC 185
+VH +VK GL + + +GN L++ Y +C + A K+F + ER T VS+NS+++
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 186 V-------------------------------ENLWLRDGVEYFLKMRGSGFEPDETSMV 214
V E+ + + F +++ G P+ +++
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR 274
+L CA+L L L R H ++RG + +L L+D+Y K G+L +A VF+ +R
Sbjct: 573 NLLPVCAQLASLHLVRQCH-GYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 275 NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR 334
+++ ++AM+ G A HG +EAL ++ M+E+ NI+P++V +L AC HAG++ +G +
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTES--NIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 335 YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
+ + VHG+KP M Y VD+ R G L +AY F+ MPV P+ +W TLL AC+
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTT- 748
Query: 395 DAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAG 454
++R +G V LL E GN V+++N+YA WE +R +M+ MKK AG
Sbjct: 749 --YNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAG 806
Query: 455 ESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
S +++ G F +G S P ++ L++ L L +K
Sbjct: 807 CSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 21/346 (6%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMR-ERGVKPNKLTFPFL 115
+ + +K+ + P+ WNI++ G + S E + F+ M KP+ +TF +
Sbjct: 70 RRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKIL-DARKVFDEMPERT 174
L C GK +H+ +K GL+ D VGN L++ Y + I DA FD + ++
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELG---YLSLGRW 231
VSWN++I EN + D F M EP+ ++ +L CA + GR
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 232 VHCQVV----LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLA 287
+H VV L+ V C +LV Y + G + A +F RM +++++W+ +I G A
Sbjct: 249 IHSYVVQRSWLQTHVFVCN---SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG---YRYFREMEYVHG 344
+ +A LF + D + P+ VT + +L C+ + G + Y Y+
Sbjct: 306 SNCEWFKAFQLFHNLVHKGD-VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYL-- 362
Query: 345 IKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
++ V A++ Y R G AY + S+ D I W +L A
Sbjct: 363 LEDTSVG-NALISFYARFGDTSAAY-WAFSLMSTKDIISWNAILDA 406
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 175/390 (44%), Gaps = 18/390 (4%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV---GSALR 126
A +SWN +I GF+ ++ +A F M + +PN T +L CA A R
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACR 244
Query: 127 EGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITAC 185
G+Q+H+ V+ L + V+V N+L++FY R +I +A +F M + VSWN VI
Sbjct: 245 SGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 186 VENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL- 243
N + F + G PD +++ +L CA+L L+ G+ +H ++ +L
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+G AL+ Y + G A F M +++++W+A++ A ++ L +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADS--PKQFQFLNLLHH 422
Query: 304 ENHDNIRPNYVTYLGVLCACSHA---GMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
++ I + VT L +L C + G V E + Y + +H + + A++D Y
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG-NALLDAYA 481
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGN 420
+ G + A++ + RTL+S S+ + +G D + +
Sbjct: 482 KCGNVEYAHKIFLGLSER------RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 421 LVIVANLYAEAGMWERAANVRRVMRDGGMK 450
++ +YAE+ A V R ++ GM+
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 185/424 (43%), Gaps = 49/424 (11%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPS-----KNLTHARKLVLH 68
++L +C S+D+ ++ IH + L V+VC+ S + A L
Sbjct: 229 NVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTR 288
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG-VKPNKLTFPFLLKCCAVGSALRE 127
+ +SWN++I G+A++ +A +F + +G V P+ +T +L CA + L
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 128 GKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
GK++H+ ++ L D VGN LI+FY R A F M + +SWN+++ A
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV---L 243
++ + + D +++ +L C + + + VH V G++
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE 468
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERM-EKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
+LG AL+D Y K G + YA +F + E+R ++++++++ G G ++A LF M
Sbjct: 469 EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 303 SENH-----------------------------DNIRPNYVTYLGVLCACSHAG---MVD 330
S +RPN VT + +L C+ +V
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+ + Y + G + G ++D+Y + G L+ AY QS D +++ +++
Sbjct: 589 QCHGYI-----IRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAG 642
Query: 391 CSVH 394
+VH
Sbjct: 643 YAVH 646
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 11/292 (3%)
Query: 104 GVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDA 163
G + F ++K CA S L G+ +H K G + V +++N Y +C+++ D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 164 RKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMR-GSGFEPDETSMVLMLSACAE 222
+K+F +M PV WN V+T + R+ + +F M +P + ++L C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL-GYARLVFERMEKRNVLTWSA 281
LG G+ +H ++ G+ +G ALV MY K G + A F+ + ++V++W+A
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM-E 340
+I G +++ +A F +M + + PNY T VL C+ + R R++
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLK--EPTEPNYATIANVLPVCASMDK-NIACRSGRQIHS 251
Query: 341 YVHGIKPLMVHY---GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
YV L H ++V Y R G + EA M + D + W +++
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIA 302
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
A+ L +T +W++++R +A S P EAI VFR+++ RG++PN +T LL CA
Sbjct: 521 AQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
++L +Q H ++ GL D+ + L++ Y +C + A VF R V + ++
Sbjct: 581 LASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAM 639
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV-VLRG 240
+ + ++ + + M S +PD + ML+AC G + G ++ + + G
Sbjct: 640 VAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHG 699
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMI 283
M + + VD+ + G L A +M + N W ++
Sbjct: 700 MKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 16/240 (6%)
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
LR V+ F + SGF D + ++ ACA + L+ GR +H V G + ++ +
Sbjct: 4 LRQFVQNFRLL--SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+++MY K + + +F +M+ + + W+ ++ GL+ E + F+ M D +
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAM-HFADEPK 119
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYV--HGIKPLMVHYGAMVDIYGRAG-LLRE 367
P+ VT+ VL C G + Y Y+ G++ + A+V +Y + G + +
Sbjct: 120 PSSVTFAIVLPLCVRLG---DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANL 427
AY + + D + W +++ S + + D R L+++ N +AN+
Sbjct: 177 AYTAFDGI-ADKDVVSWNAIIAGFS-----ENNMMADAFRSFCLMLKEPTEPNYATIANV 230
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 211/412 (51%), Gaps = 8/412 (1%)
Query: 60 THARKLVLHSATPSPISW-NILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
T KLVL + LI G++ EA+ F+ M V+PN+ T+ +L
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
C + GK +H VK G +S + +L+ Y RC + D+ +VF + VSW
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
S+I+ V+N + F KM +P+ ++ L C+ L GR +H V
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
G G+ L+D+YGK G ARLVF+ + + +V++ + MI AQ+GF EAL L
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
FE M + ++PN VT L VL AC+++ +V+EG F I HY MVD+
Sbjct: 457 FERMI--NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDL 513
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRG 418
GRAG L EA E + + +NPD ++WRTLLSAC V H + + +++ +++L +EP
Sbjct: 514 LGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKV---HRKVEMAERITRKILEIEPGDE 569
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAG 470
G L++++NLYA G W R ++ M+D +KK S V++ F AG
Sbjct: 570 GTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAG 621
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 184/390 (47%), Gaps = 33/390 (8%)
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
F LL+ C ++ K + A +K G +++ G+ L++ +C I AR+VFD M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMS 126
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
ER V+WNS+I +++ ++ VE + M + PDE ++ + A ++L +
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 232 VHCQVVLRGMVLS-CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
H V+ G+ +S +G+ALVDMY K G A+LV +R+E+++V+ +A+I+G +Q G
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
EA+ F+ M + ++PN TY VL +C + + G + + G + +
Sbjct: 247 EDTEAVKAFQSMLV--EKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALA 303
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKEL 410
+++ +Y R L+ ++ + + P+ + W +L+S G+ R+E+
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLIS-----------GLVQNGREEM 351
Query: 411 LLVEPRRGGNLVIVANLY---------AEAGMWERAANVRRVMRDGGM--KKMAGESCVD 459
L+E R+ I N + + M+E + ++ G K AG +D
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 460 LGG-----SMIRFFAGYDSRPDLIPVYHLL 484
L G M R S D+I + ++
Sbjct: 412 LYGKCGCSDMARLVFDTLSEVDVISLNTMI 441
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 22/316 (6%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ +AR++ + ++WN LI EA+ ++R M V P++ T + K
Sbjct: 114 DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFK 173
Query: 118 CCAVGSALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
+ S +E ++ H AV GL+ S+V+VG+ L++ Y + K +A+ V D + E+ V
Sbjct: 174 AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVV 233
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
++I + + V+ F M +P+E + +L +C L + G+ +H +
Sbjct: 234 LITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLM 293
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
V G + T+L+ MY + + + VF+ +E N ++W+++I GL Q+G E AL
Sbjct: 294 VKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMAL 353
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG--- 353
F M D+I+PN T L CS+ M +EG + +HGI + YG
Sbjct: 354 IEFRKMM--RDSIKPNSFTLSSALRGCSNLAMFEEGRQ-------IHGI---VTKYGFDR 401
Query: 354 ------AMVDIYGRAG 363
++D+YG+ G
Sbjct: 402 DKYAGSGLIDLYGKCG 417
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 219/432 (50%), Gaps = 37/432 (8%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ +R L + I WN +I G+ ++ +EA+ +F +MR + + T ++
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINA 327
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK-------------------- 158
C L GKQ+H A KFGL D+ V + L++ Y +C
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILL 387
Query: 159 -----------KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
+I DA++VF+ + ++ +SWNS+ +N + +EYF +M
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLP 447
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
DE S+ ++SACA + L LG V + + G+ + ++L+D+Y K G + + R V
Sbjct: 448 TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRV 507
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
F+ M K + + W++MI G A +G EA+ LF+ MS IRP +T++ VL AC++ G
Sbjct: 508 FDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA--GIRPTQITFMVVLTACNYCG 565
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTL 387
+V+EG + F M+ HG P H+ MVD+ RAG + EA ++ MP + D +W ++
Sbjct: 566 LVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSI 625
Query: 388 LSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDG 447
L C A+ +G K ++++ +EP V ++ ++A +G WE +A VR++MR+
Sbjct: 626 LRGCV---ANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMREN 682
Query: 448 GMKKMAGESCVD 459
+ K G S D
Sbjct: 683 NVTKNPGSSWTD 694
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 178/405 (43%), Gaps = 70/405 (17%)
Query: 48 VYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
V V + + L+ AR+L ++ N L+ G+ + EA+ +F+++
Sbjct: 129 VVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSA 185
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK--------- 158
+ +T +LK CA AL+ GKQ+HA + G++ D + ++L+N Y +C
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 159 ----------------------KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
++ ++R +FD R + WNS+I+ + N + +
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 197 YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYG 256
F +MR E D ++ +++AC LG+L G+ +HC G++ + + L+DMY
Sbjct: 306 LFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 257 KSGA-------------------------------LGYARLVFERMEKRNVLTWSAMILG 285
K G+ + A+ VFER+E +++++W++M G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI 345
+Q+G E L F M + ++ + V+ V+ AC+ ++ G + F V G+
Sbjct: 425 FSQNGCTVETLEYFHQM--HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV-GL 481
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
V +++D+Y + G + +M V D + W +++S
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISG 525
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 8/273 (2%)
Query: 39 HNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFR 98
++T LL+ ++ V + A+++ S ISWN + GF+ + +E + F
Sbjct: 382 YDTILLNSMIKV--YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFH 439
Query: 99 KMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK 158
+M + + ++++ ++ CA S+L G+QV A A GLDSD V ++LI+ Y +C
Sbjct: 440 QMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 159 KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLS 218
+ R+VFD M + V WNS+I+ N + ++ F KM +G P + + +++L+
Sbjct: 500 FVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLT 559
Query: 219 ACAELGYLSLGRWV-HCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNV 276
AC G + GR + V G V + + +VD+ ++G + A + E M +
Sbjct: 560 ACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDG 619
Query: 277 LTWSAMILGLAQHGF----AEEALSLFEMMSEN 305
WS+++ G +G+ + A + E+ EN
Sbjct: 620 SMWSSILRGCVANGYKAMGKKAAEKIIELEPEN 652
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 146/351 (41%), Gaps = 87/351 (24%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S S + AR L + SWN +I G+ S ++ F M ER
Sbjct: 73 SRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER---------- 122
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
D Y N +++ + + ++ AR++F+ MPE+
Sbjct: 123 -----------------------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEK 153
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
V+ NS++ + N + + + F ++ F D ++ +L ACAEL L G+ +H
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIH 210
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGAL-----------------------GYA------ 264
Q+++ G+ ++ ++LV++Y K G L GYA
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVN 270
Query: 265 --RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLC 321
R +F+R R V+ W++MI G + EAL LF EM +E ++ R T V+
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR----TLAAVIN 326
Query: 322 ACSHAGMVDEGYRYFREMEYVH----GIKPLMVHYGAMVDIYGRAGLLREA 368
AC G ++ G ++M + H G+ +V ++D+Y + G EA
Sbjct: 327 ACIGLGFLETG----KQM-HCHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 47/277 (16%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
LL+ C+ + +Q + +K G L S V V N+L+ Y R K+ AR +FDEMP+R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
SWN++I ++ G E +R P+ GY W
Sbjct: 92 NYFSWNTMIEG-----YMNSG-EKGTSLRFFDMMPERD------------GY----SW-- 127
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
VV+ G + K+G L AR +F M +++V+T ++++ G +G+AE
Sbjct: 128 -NVVVSG--------------FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
EAL LF+ + N + +T VL AC+ + G + ++ + G++
Sbjct: 173 EALRLFKEL-----NFSADAITLTTVLKACAELEALKCGKQIHAQI-LIGGVECDSKMNS 226
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
++V++Y + G LR A ++ + PD L+S
Sbjct: 227 SLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISG 262
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 214 VLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL-GTALVDMYGKSGALGYARLVFERME 272
V +L +C+ +L R + ++ +G + S + L+ MY +SG +G AR +F+ M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 273 KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
RN +W+ MI G G +L F+MM E R Y ++ V+ + AG +
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE-----RDGY-SWNVVVSGFAKAGELSVA 143
Query: 333 YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
R F M + +V +++ Y G EA + + + D I T+L AC+
Sbjct: 144 RRLFNAMP-----EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACA 198
Query: 393 VHDAHDRTGIGDKVRKELLL--VEPRRGGNLVIVANLYAEAG-------MWERA------ 437
+A G ++ ++L+ VE N +V N+YA+ G M E+
Sbjct: 199 ELEA---LKCGKQIHAQILIGGVECDSKMNSSLV-NVYAKCGDLRMASYMLEQIREPDDH 254
Query: 438 ---------ANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYH 482
AN RV G+ CV L SMI + + + + + +++
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 202/350 (57%), Gaps = 10/350 (2%)
Query: 144 VYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
V +I+ Y K I ARK+FD MPER VSWN++I +N ++G+ F +M+
Sbjct: 207 VITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQA 266
Query: 204 S-GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
+ +PD+ +++ +L A ++ G LSLG W HC V + + ++ TA++DMY K G +
Sbjct: 267 TTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIE 326
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLC 321
A+ +F+ M ++ V +W+AMI G A +G A AL LF MM E +P+ +T L V+
Sbjct: 327 KAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE----KPDEITMLAVIT 382
Query: 322 ACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDP 381
AC+H G+V+EG ++F M + G+ + HYG MVD+ GRAG L+EA + I +MP P+
Sbjct: 383 ACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNG 441
Query: 382 IVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVR 441
I+ + LSAC + +R +++ K+ + +EP+ GN V++ NLYA W+ V+
Sbjct: 442 IILSSFLSACGQYKDIER---AERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVK 498
Query: 442 RVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHL 491
VMR KK G S +++ + F +G + P ++ +L L +H+
Sbjct: 499 NVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHM 548
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 22/306 (7%)
Query: 78 NILIRGFATSDSPIEAIWVFRKMR-ERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
N +I+ + + ++ ++R +R E P+ TF L K C++ + +G Q+H+
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
+FG +D+YV +++ Y + K+ AR FDEMP R+ VSW ++I+ + L +
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 197 YFLKMRGSGFEPDETSMVL---MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
F +M P +V+ M+ + G ++ R + ++ + ++ T ++
Sbjct: 166 LFDQM------PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI----TWTTMIH 215
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
Y + AR +F+ M +RN+++W+ MI G Q+ +E + LF+ M ++ P+
Sbjct: 216 GYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT-TSLDPDD 274
Query: 314 VTYLGVLCACSHAGMVDEG---YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
VT L VL A S G + G + + + + +K A++D+Y + G + +A
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCT----AILDMYSKCGEIEKAKR 330
Query: 371 FIQSMP 376
MP
Sbjct: 331 IFDEMP 336
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 9/263 (3%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMR-ERGVKPNKLTFPFL 115
K++ ARKL + +SWN +I G+ + P E I +F++M+ + P+ +T +
Sbjct: 221 KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
L + AL G+ H + LD V V +++ Y +C +I A+++FDEMPE+
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR-WVHC 234
SWN++I N R ++ F+ M +PDE +M+ +++AC G + GR W H
Sbjct: 341 ASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFH- 398
Query: 235 QVVLRGMVLSCQLG--TALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGF 291
V+R M L+ ++ +VD+ G++G+L A + M + N + S+ + Q+
Sbjct: 399 --VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKD 456
Query: 292 AEEALSLFEMMSENHDNIRPNYV 314
E A + + E NYV
Sbjct: 457 IERAERILKKAVELEPQNDGNYV 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 13/255 (5%)
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW-NSVITACVENLWLRDG 194
++ ++++V + + I ARK+FD+ P+R NS+I A +E D
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 195 VEYFLKMRG-SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
+ +R + F PD + + +C+ + G +H Q+ G + T +VD
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY K G +G AR F+ M R+ ++W+A+I G + G + A LF+ M D
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKD-----V 176
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
V Y ++ +G + R F EM + ++ + M+ Y + A +
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTH-----KTVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 374 SMPVNPDPIVWRTLL 388
+MP + + W T++
Sbjct: 232 AMP-ERNLVSWNTMI 245
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 218/411 (53%), Gaps = 7/411 (1%)
Query: 56 SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFL 115
S ++ R++ PS +WN ++ G++ + EAI FR+M+ + +KP+K T +
Sbjct: 363 SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE-MPERT 174
L CA L GKQ+H ++ + + ++ + LI Y C+K+ + +FD+ + E
Sbjct: 423 LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 482
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVH 233
WNS+I+ N+ + F +M + P+ETS +LS+C+ L L GR H
Sbjct: 483 IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 542
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
VV G V + TAL DMY K G + AR F+ + ++N + W+ MI G +G +
Sbjct: 543 GLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD 602
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
EA+ L+ M + + +P+ +T++ VL ACSH+G+V+ G M+ +HGI+P + HY
Sbjct: 603 EAVGLYRKMISSGE--KPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI 660
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLV 413
+VD GRAG L +A + ++ P ++W LLS+C V H + +V ++L+ +
Sbjct: 661 CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV---HGDVSLARRVAEKLMRL 717
Query: 414 EPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSM 464
+P+ V+++N Y+ W+ +A ++ +M + K G+S G +
Sbjct: 718 DPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 160/331 (48%), Gaps = 20/331 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I +A+ V+++M G P++ T +L C+ G + H
Sbjct: 104 VSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGV 163
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILD-ARKVFDEMPERTPVSWNSVITACVENLWLRD 193
AVK GLD +++VGN L++ Y +C I+D +VF+ + + VS+ +VI + +
Sbjct: 164 AVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLE 223
Query: 194 GVEYFLKMRGSGFEPDET--SMVLMLSA----CAELGYL---SLGRWVHCQVVLRGMVLS 244
V+ F M G + D S +L +SA C L + LG+ +HC + G
Sbjct: 224 AVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGD 283
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
L +L+++Y K+ + A L+F M + NV++W+ MI+G Q +++++ M +
Sbjct: 284 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
+ +PN VT + VL AC +G V+ G R F + +P + + AM+ Y
Sbjct: 344 S--GFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEH 396
Query: 365 LREA---YEFIQSMPVNPDPIVWRTLLSACS 392
EA + +Q + PD +LS+C+
Sbjct: 397 YEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 61/289 (21%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG- 128
+ P+ +S+ +I G A + +EA+ +FR M E+GV+ + + +L SA REG
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI----SAPREGC 256
Query: 129 ------------KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
KQ+H A++ G D+++ N+L+ Y + K + A +F EMPE V
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV 316
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
SWN +I + VE+ +MR SGF+P+E + + +L AC
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF--------------- 361
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
+SG + R +F + + +V W+AM+ G + + EEA+
Sbjct: 362 --------------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAI 401
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI 345
S F M N++P+ T +L +C+ R+ + +HG+
Sbjct: 402 SNFRQM--QFQNLKPDKTTLSVILSSCAR-------LRFLEGGKQIHGV 441
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM---- 170
LL+C GK +H V+ G+ SD Y+ N L++ Y C ARKVFDEM
Sbjct: 12 LLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRD 71
Query: 171 ---------------------------PERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
PER VSWN++I+ V + + + +M
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSG-ALG 262
GF P ++ +LSAC+++ G H V G+ + +G AL+ MY K G +
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
Y VFE + + N ++++A+I GLA+ EA+ +F +M E
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCE 233
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 239/461 (51%), Gaps = 9/461 (1%)
Query: 22 IDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPIS-WNIL 80
I++ Q F +G + ++ + LVY+ SL S N R VL +S ++
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLC-SGNGEAIR--VLDDLPYCDLSVFSSA 208
Query: 81 IRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGL 140
+ G+ + E + V RK N LT+ L+ + L QVH+ V+FG
Sbjct: 209 LSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
+++V LIN YG+C K+L A++VFD+ + +++ A ++ + + F K
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGA 260
M P+E + ++L++ AEL L G +H V+ G +G ALV+MY KSG+
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 261 LGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
+ AR F M R+++TW+ MI G + HG EAL F+ M + PN +T++GVL
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE--IPNRITFIGVL 446
Query: 321 CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPD 380
ACSH G V++G YF ++ ++P + HY +V + +AG+ ++A +F+++ P+ D
Sbjct: 447 QACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWD 506
Query: 381 PIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANV 440
+ WRTLL+AC V + +G KV + + P G V+++N++A++ WE A V
Sbjct: 507 VVAWRTLLNACYVRRNYR---LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKV 563
Query: 441 RRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY 481
R +M + G+KK G S + + F A + P++ +Y
Sbjct: 564 RSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIY 604
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 164/346 (47%), Gaps = 19/346 (5%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG-VKPNKLTFPFL 115
+ ARKL + +SW +++G+ S E + +F+ M G +PN+ +
Sbjct: 83 RETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVV 142
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
K C+ + EGKQ H +K+GL S +V N L+ Y C +A +V D++P
Sbjct: 143 FKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL 202
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
++S ++ +E ++G++ K F + + + L + L L+L VH +
Sbjct: 203 SVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+V G + AL++MYGK G + YA+ VF+ +N+ + ++ Q EEA
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI-------KPL 348
L+LF M + + PN T+ +L + + ++ +G + +HG+ +
Sbjct: 323 LNLFSKM--DTKEVPPNEYTFAILLNSIAELSLLKQG-------DLLHGLVLKSGYRNHV 373
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
MV A+V++Y ++G + +A + M D + W T++S CS H
Sbjct: 374 MVG-NALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH 417
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 195/364 (53%), Gaps = 3/364 (0%)
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
++++ L+ G+ A+ +FR MR+ V N T L + L + H
Sbjct: 192 AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
+K GLD D+++ LI YG+ I AR++FD + V+WN +I + L +
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
V +M+ +P+ ++ V +LS+CA +GR V + + L LGTALVD
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVD 371
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY K G L A +F RM+ ++V +W+AMI G HG A EA++LF M E + +RPN
Sbjct: 372 MYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNE 431
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
+T+L VL ACSH G+V EG R F+ M + P + HYG +VD+ GRAG L EAYE I+
Sbjct: 432 ITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIR 491
Query: 374 SMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
++P+ D WR LL+AC V+ D +G+ V L + + +++A +A AG
Sbjct: 492 NLPITSDSTAWRALLAACRVYGNAD---LGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Query: 434 WERA 437
E++
Sbjct: 549 PEKS 552
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 212/419 (50%), Gaps = 12/419 (2%)
Query: 11 QCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL---SPSKNLTHARKLVL 67
QC L+N RS ++ IHG+ T L + V L S ++ +A +
Sbjct: 27 QCQKLINDLRSCRDTVEVS---RIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFE 83
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
H + + +N +IRG++ SD P A VF ++R +G+ ++ +F LK C+ +
Sbjct: 84 HVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSI 143
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT-PVSWNSVITACV 186
G+ +H A++ G + N LI+FY C KI DARKVFDEMP+ V++++++ +
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ ++ F MR S + ++++ LSA ++LG LS H + G+ L
Sbjct: 204 QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L TAL+ MYGK+G + AR +F+ +++V+TW+ MI A+ G EE + L M +
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM--KY 321
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+ ++PN T++G+L +C+++ G R ++ I + A+VD+Y + GLL
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVG-RTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHD-AHDRTGIGDKVRKELLLVEPRRGGNLVIV 424
+A E M + D W ++S H A + + +K+ +E V P LV++
Sbjct: 381 KAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVL 438
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 219/416 (52%), Gaps = 41/416 (9%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
+N LIR + T+ ++ +F M V+PN LTFP L+K ++ G +H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
K G D +V + + FYG + +RK+FD++ V+ NS++ AC N + E
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 197 YFLKMRGS----------GFE------------------------PDETSMVLMLSACAE 222
YF +M + GF P+E + V +LS+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 223 L--GYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWS 280
G + LG+ +H V+ + ++L+ LGTAL+DMYGK+G L A +F+++ + V W+
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
A+I LA +G ++AL +FEMM ++ + PN +T L +L AC+ + +VD G + F +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSY--VHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
+ I P HYG +VD+ GRAGLL +A FIQS+P PD V LL AC + H+ T
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKI---HENT 408
Query: 401 GIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES 456
+G+ V K+L+ ++P+ G V ++ A W A +R+ M + G++K+ S
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKM--RERGV-KPNKLTFPFLLKCCAV--GSALREGK 129
+SW +I GF+ +A+ VF +M ER V PN+ TF +L CA +R GK
Sbjct: 184 VSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGK 243
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
Q+H + + +G L++ YG+ + A +FD++ ++ +WN++I+A N
Sbjct: 244 QIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNG 303
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL-SCQLG 248
+ +E F M+ S P+ +++ +L+ACA + LG + + ++ + +
Sbjct: 304 RPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHY 363
Query: 249 TALVDMYGKSGAL 261
+VD+ G++G L
Sbjct: 364 GCVVDLIGRAGLL 376
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 205/408 (50%), Gaps = 6/408 (1%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNK 109
VC+ S L A +L + S + ++ +A A+ F K R+ +K +
Sbjct: 288 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 347
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE 169
+ +L C S + G +H A+K GL + V N LI Y + + +F++
Sbjct: 348 VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ 407
Query: 170 MPERTPVSWNSVITACVENLWLRDGVEYFLKMR-GSGFEPDETSMVLMLSACAELGYLSL 228
+ E +SWNSVI+ CV++ E F +M G PD ++ +L+ C++L L+L
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G+ +H + + TAL+DMY K G A VF+ ++ TW++MI G +
Sbjct: 468 GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSL 527
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPL 348
G ALS + M E ++P+ +T+LGVL AC+H G VDEG FR M GI P
Sbjct: 528 SGLQHRALSCYLEMREK--GLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRK 408
+ HY MV + GRA L EA I M + PD VW LLSAC +H + +G+ V +
Sbjct: 586 LQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELE---VGEYVAR 642
Query: 409 ELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES 456
++ +++ + GG V+++NLYA MW+ VR +M+D G G S
Sbjct: 643 KMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVS 690
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 7/238 (2%)
Query: 87 SDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG--SALREGKQVHADAVKFGLDSDV 144
S SPI +FR + + PN T L+ S + +QV K GLD V
Sbjct: 29 SSSPIT---IFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFV 85
Query: 145 YVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGS 204
YV +L+N Y + + A+ +FDEMPER V WN++I N + D + F+ M
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 205 GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYA 264
GF P T++V +L C + G++S GR VH G+ L Q+ AL+ Y K LG A
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 265 RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
++F M+ ++ ++W+ MI +Q G EEA+++F+ M E + I P VT + +L A
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSA 261
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 155/351 (44%), Gaps = 19/351 (5%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S L A L S +SWN +I ++ S EAI VF+ M E+ V+ + +T
Sbjct: 197 SKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 256
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
LL SA + +H VK G+ +D+ V +L+ Y RC ++ A +++ +
Sbjct: 257 NLL------SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQD 310
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
+ V S+++ E + V YF K R + D ++V +L C + ++ +G +H
Sbjct: 311 SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLH 370
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
+ G+ + L+ MY K + +FE++++ +++W+++I G Q G A
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAS 430
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVD-----EGYRYFREMEYVHGIKPL 348
A +F M + P+ +T +L CS ++ GY E + +
Sbjct: 431 TAFEVFHQMMLT-GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCT- 488
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
A++D+Y + G +A +S+ P W +++S S+ R
Sbjct: 489 -----ALIDMYAKCGNEVQAESVFKSIKA-PCTATWNSMISGYSLSGLQHR 533
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 175/404 (43%), Gaps = 46/404 (11%)
Query: 24 QLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKN-LTHARKLVLHSATPSPISWNILIR 82
Q+ Q+Q G Y+ + L+ +L K +T A+ L + WN LI
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLL---NLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 83 GFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDS 142
G++ + +A +F M ++G P+ T LL C + +G+ VH A K GL+
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 143 DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMR 202
D V N LI+FY +C ++ A +F EM +++ VSWN++I A ++ + + F M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 203 GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
E +++ +LSA +HC VV GMV + T+LV Y + G L
Sbjct: 245 EKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
A ++ ++ +++ ++++ A+ G + A+ F ++ + V +G+L
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS--KTRQLCMKIDAVALVGILHG 356
Query: 323 CSHAGMVDEG-------------------------YRYFREMEYVHGI-----KPLMVHY 352
C + +D G Y F ++E V + + ++ +
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 353 GAMVDIYGRAGLLREAYEFIQSMPVN----PDPIVWRTLLSACS 392
+++ ++G A+E M + PD I +LL+ CS
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 208/416 (50%), Gaps = 39/416 (9%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKP-NKLTFPFLLKCCAVGSALREGKQVHA 133
IS + +A + +A+ +F +M P + F LK CA G VHA
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT---------- 183
+VK S+ +VG L++ YG+C + ARK+FDE+P+R V WN++I+
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 184 ------------------ACVENL-WLRDG----VEYFLKMRGSGFEPDETSMVLMLSAC 220
A ++ L DG +E++ KM F+P+ +++ ++SAC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 221 AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWS 280
+ +G L + +H + QL + LV+ YG+ G++ Y +LVF+ ME R+V+ WS
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
++I A HG AE AL F+ M + P+ + +L VL ACSHAG+ DE YF+ M+
Sbjct: 253 SLISAYALHGDAESALKTFQEM--ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
+G++ HY +VD+ R G EAY+ IQ+MP P W LL AC +
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR---NYGEI 367
Query: 401 GIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES 456
+ + +ELL+VEP N V++ +Y G E A +R M++ G+K G S
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 216/425 (50%), Gaps = 14/425 (3%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N A+ SWN +I G+A +A +F M E+ N++++ ++
Sbjct: 139 NFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMIS 194
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPV 176
L + A G V +I Y + KK+ A +F +M + V
Sbjct: 195 GYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+WN++I+ VEN DG++ F M G P+ + + L C+EL L LGR +H V
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
+ T+L+ MY K G LG A +FE M+K++V+ W+AMI G AQHG A++AL
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
LF M +N IRP+++T++ VL AC+HAG+V+ G YF M + ++P HY MV
Sbjct: 371 CLFREMIDN--KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
D+ GRAG L EA + I+SMP P V+ TLL AC V H + + ++LL + +
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV---HKNVELAEFAAEKLLQLNSQ 485
Query: 417 RGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
V +AN+YA WE A VR+ M++ + K+ G S +++ + F + P+
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Query: 477 LIPVY 481
L ++
Sbjct: 546 LDSIH 550
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 19/278 (6%)
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
+ D + N +++ Y R A+ FD MP + SWN++IT + E F
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGA 260
M E +E S M+S E G L +RG+V TA++ Y K+
Sbjct: 181 M----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWTAMITGYMKAKK 232
Query: 261 LGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGV 319
+ A +F+ M +N++TW+AMI G ++ E+ L LF M E + IRPN
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE--EGIRPNSSGLSSA 290
Query: 320 LCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNP 379
L CS + G R ++ + + +++ +Y + G L +A++ + M
Sbjct: 291 LLGCSELSALQLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KK 348
Query: 380 DPIVWRTLLSACSVHDAHD------RTGIGDKVRKELL 411
D + W ++S + H D R I +K+R + +
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWI 386
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 246/531 (46%), Gaps = 78/531 (14%)
Query: 8 NKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL--SPSKNLTHARKL 65
+++ +SL++ C+ L + AQ G ++ + ++LV SL SP +L+ R
Sbjct: 28 DESHFISLIHACKDTASLRHVHAQILRRG-VLSSRVAAQLVSCSSLLKSPDYSLSIFR-- 84
Query: 66 VLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSAL 125
+S +P N LIRG + ++ F M GVKP++LTFPF+LK +
Sbjct: 85 --NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 126 REGKQVHADAVKFGLDSDVY-----------------------------------VGNNL 150
G+ +HA +K +D D + + N L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 151 INFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL------------------- 191
IN Y R K + A +F MPER SW+++I V++ L
Sbjct: 203 INGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT 262
Query: 192 ------------RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+ + +M G +P+E ++ +LSAC++ G L G +H ++
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ L +GTALVDMY K G L A VF M +++L+W+AMI G A HG +A+ F
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
M + +P+ V +L VL AC ++ VD G +F M + I+P + HY +VD+
Sbjct: 383 RQMM--YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
GRAG L EA+E +++MP+NPD W L AC H + R + V + LL ++P G
Sbjct: 441 GRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRR---AESVSQNLLELDPELCG 497
Query: 420 NLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAG 470
+ + + +A G + R ++ ++ G S ++L G + +F AG
Sbjct: 498 SYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAG 548
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 140/359 (38%), Gaps = 74/359 (20%)
Query: 102 ERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKIL 161
+R P++ F L+ C ++LR VHA ++ G+ S V L++ K
Sbjct: 22 DRQASPDESHFISLIHACKDTASLR---HVHAQILRRGVLSS-RVAAQLVSCSSLLKSPD 77
Query: 162 DARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
+ +F ER P N++I EN V +F+ M G +PD + +L + +
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER----------- 270
+LG+ LGR +H + + + +LVDMY K+G L +A VFE
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 271 ------------------------MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
M +RN +WS +I G G A LFE+M E +
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 307 -----------------------------DNIRPNYVTYLGVLCACSHAGMVDEGYRYFR 337
++PN T VL ACS +G + G R
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH- 316
Query: 338 EMEYV--HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
Y+ +GIK A+VD+Y + G L A +M + D + W ++ +VH
Sbjct: 317 --GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQGWAVH 372
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 210/400 (52%), Gaps = 8/400 (2%)
Query: 52 SLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLT 111
SL + ++ H KL ++S+ WN ++ GF ++ A+W+ ++ + + + T
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAV---WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYT 344
Query: 112 FPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP 171
LK C LR G QVH+ V G + D VG+ L++ + I DA K+F +P
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
+ ++++ +I CV++ + F ++ G + D+ + +L C+ L L G+
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ 464
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H + +G TALVDMY K G + ++F+ M +R+V++W+ +I+G Q+G
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGR 524
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
EEA F M + I PN VT+LG+L AC H+G+++E M+ +G++P + H
Sbjct: 525 VEEAFRYFHKMI--NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
Y +VD+ G+AGL +EA E I MP+ PD +W +LL+AC H G+ + ++LL
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACG---THKNAGLVTVIAEKLL 639
Query: 412 LVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKK 451
P ++N YA GMW++ + VR + G K+
Sbjct: 640 KGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE 679
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 184/414 (44%), Gaps = 68/414 (16%)
Query: 26 HQIQAQFHIHGHYHNTYLLSELV--YVCSLSPSKNLTHARKLVLHSATPSPISWNILIRG 83
IQA G N ++ + ++ YV + L+ A K+ + + ++W ++ G
Sbjct: 25 ESIQAHVIKQGISQNVFIANNVISMYV----DFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 84 FATSDSPIEAIWVFRKMRERGVKP-NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDS 142
+ + P +AI ++R+M + + N+ + +LK C + ++ G V+ K L
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 143 DVYVGNNLINFYGRCKKILDARKVFDE-------------------------------MP 171
DV + N++++ Y + ++++A F E MP
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
+ VSWN +I+ V+ R +E+ ++M+ G D ++ L AC+ G L++G+
Sbjct: 201 QPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME---KRNVLTWSAMILGLAQ 288
+HC VV G+ S +AL+DMY G+L YA VF + + +V W++M+ G
Sbjct: 260 LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLI 319
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC-----------SHAGMVDEGYRYFR 337
+ E AL L ++ ++ + T G L C H+ +V GY
Sbjct: 320 NEENEAALWL--LLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY---- 373
Query: 338 EMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSAC 391
E++Y+ G +VD++ G +++A++ +P N D I + L+ C
Sbjct: 374 ELDYIVG--------SILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGC 418
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 38/317 (11%)
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
L+ C A + G+ + A +K G+ +V++ NN+I+ Y + + DA KVFDEM ER
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFE-PDETSMVLMLSACAELGYLSLGRWVHC 234
V+W ++++ + +E + +M S E +E +L AC +G + LG V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 235 QV---VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
++ LRG V+ L ++VDMY K+G L A F+ + + + +W+ +I G + G
Sbjct: 132 RIGKENLRGDVV---LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 292 AEEALSLFEMMSENH------------DNIRPNYVTYL------GV----------LCAC 323
+EA++LF M + + D P + +L G+ L AC
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKAC 248
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI--QSMPVNPDP 381
S G++ G + G++ A++D+Y G L A + + + VN
Sbjct: 249 SFGGLLTMG-KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 382 IVWRTLLSACSVHDAHD 398
VW ++LS +++ ++
Sbjct: 308 AVWNSMLSGFLINEENE 324
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 214/425 (50%), Gaps = 40/425 (9%)
Query: 105 VKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDAR 164
++P+ F L+K CA ++ G+QVH + +D V ++L++ Y +C + A+
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 165 KVFDEMPERTPVSWNSVITACVENLWLRDGVEYF-----------------LKMRGSGFE 207
VFD + + +SW ++++ ++ + +E F G G E
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 208 P---------------DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
D + ++ ACA L GR VH V+ G + AL+
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K + A+ +F RM R+V++W+++I+G+AQHG AE+AL+L++ M + ++PN
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSH--GVKPN 338
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
VT++G++ ACSH G V++G F+ M +GI+P + HY ++D+ GR+GLL EA I
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 373 QSMPVNPDPIVWRTLLSACSVHDAHDRTG--IGDKVRKELLLVEPRRGGNLVIVANLYAE 430
+MP PD W LLSAC + G I D + L +P ++++N+YA
Sbjct: 399 HTMPFPPDEPTWAALLSACK-RQGRGQMGIRIADHLVSSFKLKDP---STYILLSNIYAS 454
Query: 431 AGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLH 490
A +W + + RR + + ++K G S V++ F+AG S P ++ LL L
Sbjct: 455 ASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEE 514
Query: 491 LKMAN 495
+++ N
Sbjct: 515 MRIRN 519
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
L+ CA L K +HA VK G+ + N L+N YG+C A +VFDEMP R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 176 VSWNSVITACVE-NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
++W SV+TA + NL + + SG PD+ ++ ACA LG + GR VHC
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
++ + ++LVDMY K G L A+ VF+ + +N ++W+AM+ G A+ G EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM--EYVHGIKPLMV 350
AL LF ++ N ++ ++ +G E + F EM E V + PL++
Sbjct: 190 ALELFRILPVK------NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVL 241
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 4/269 (1%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMR-ERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
SW LI GF S +EA VF +MR ER + L ++ CA +A G+QVH
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ G DS V++ N LI+ Y +C ++ A+ +F M R VSW S+I ++
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR-GMVLSCQLGTALVD 253
+ + M G +P+E + V ++ AC+ +G++ GR + + G+ S Q T L+D
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 254 MYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
+ G+SG L A + M + TW+A++ + G + + + + + + P+
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPS 443
Query: 313 -YVTYLGVLCACSHAGMVDEGYRYFREME 340
Y+ + + S G V E R EME
Sbjct: 444 TYILLSNIYASASLWGKVSEARRKLGEME 472
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 217 LSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNV 276
L CA L+ + +H +V G+V C L LV++YGK GA +A VF+ M R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 277 LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR-- 334
+ W++++ L Q + + LS+F + + +RP+ + ++ AC++ G +D G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSS-SGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 335 -YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLS 389
+F EY + V ++VD+Y + GLL A S+ V + I W ++S
Sbjct: 129 CHFIVSEYAND----EVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVS 179
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 240/467 (51%), Gaps = 12/467 (2%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYV---CSLSPSKNLTHARKLVLHS 69
LSL + RS+D QI +Q G +T + + LV + CS S A ++
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE----VEASRVFGAM 387
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+P+ +SW LI G + + +M +R V+PN +T +L+ C+ +R
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
++HA ++ +D ++ VGN+L++ Y +K+ A V M R +++ S++T E
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ M G G D+ S+ +SA A LG L G+ +HC V G + +
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+LVDMY K G+L A+ VFE + +V++W+ ++ GLA +GF ALS FE M
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM--RMKET 625
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
P+ VT+L +L ACS+ + D G YF+ M+ ++ I+P + HY +V I GRAG L EA
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
+++M + P+ ++++TLL AC +G+ + + L + P +++A+LY
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRY---RGNLSLGEDMANKGLALAPSDPALYILLADLYD 742
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
E+G E A R +M + + K G+S V++ G + F + +R D
Sbjct: 743 ESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVD 789
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 191/394 (48%), Gaps = 19/394 (4%)
Query: 3 TRSLSN-KNQCLSLLNLCRSIDQLHQIQAQFHIH------GHYHNTYLLSELVYVCSLSP 55
T L N + C+ +L+ C S + + HIH G N L + L+ +
Sbjct: 17 TNELGNLQKSCIRILSFCES----NSSRIGLHIHCPVIKFGLLENLDLCNNLLSL--YLK 70
Query: 56 SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFL 115
+ + +ARKL + + +W ++I F S A+ +F +M G PN+ TF +
Sbjct: 71 TDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSV 130
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
++ CA + G +VH +K G + + VG++L + Y +C + +A ++F +
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+SW +I++ V R+ ++++ +M +G P+E + V +L A + LG L G+ +H
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSN 249
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+++RG+ L+ L T+LVD Y + + A V +++V W++++ G ++ A+EA
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 296 LSLF-EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
+ F EM S ++PN TY +L CS +D G + + V G + A
Sbjct: 310 VGTFLEMRSL---GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNA 365
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+VD+Y + + V+P+ + W TL+
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 7/301 (2%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
+L C S+ R G +H +KFGL ++ + NNL++ Y + I +ARK+FDEM RT
Sbjct: 30 ILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
+W +I+A ++ + F +M SG P+E + ++ +CA L +S G VH
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
V+ G + +G++L D+Y K G A +F ++ + ++W+ MI L E
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
AL + M + + PN T++ +L A S G+ E + V GI +V +
Sbjct: 209 ALQFYSEMVK--AGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTS 264
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
+VD Y + + +A + S D +W +++S V + + +G + L ++
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGF-VRNLRAKEAVGTFLEMRSLGLQ 322
Query: 415 P 415
P
Sbjct: 323 P 323
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 210/386 (54%), Gaps = 15/386 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I+ + + A +F +M++R + +++ ++ S + + + ++
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ D + N +++ Y + AR F++ PE+ VSWNS+I A +N ++
Sbjct: 338 MP----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
V+ F++M G +PD ++ +LSA L L LG +H Q+V++ ++ + AL+ M
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITM 452
Query: 255 YGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
Y + G + +R +F+ M+ KR V+TW+AMI G A HG A EAL+LF M N I P++
Sbjct: 453 YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSN--GIYPSH 510
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
+T++ VL AC+HAG+VDE F M V+ I+P M HY ++V++ G EA I
Sbjct: 511 ITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIIT 570
Query: 374 SMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
SMP PD VW LL AC + ++ G+ + + +EP V++ N+YA+ G+
Sbjct: 571 SMPFEPDKTVWGALLDACRI---YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGL 627
Query: 434 WERAANVRRVMRDGGMKKMAGESCVD 459
W+ A+ VR M +KK G S VD
Sbjct: 628 WDEASQVRMNMESKRIKKERGSSWVD 653
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N+ AR + +SWN +I + + EA+ +F +M G KP+ T LL
Sbjct: 358 NVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS 417
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPV 176
LR G Q+H VK + DV V N LI Y RC +I+++R++FDEM +R +
Sbjct: 418 ASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELG 224
+WN++I + + + F M+ +G P + V +L+ACA G
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 148/385 (38%), Gaps = 71/385 (18%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ AR + + ++WN +I G+ +A +F M +R V + C
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSC 115
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
+ L E +++ + D + N +I+ Y + ++I +A +F++MPER VSW
Sbjct: 116 GGI-RFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ--- 235
+++IT +N + V F KM D + + +++ + LS WV Q
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMP----VKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 236 ---------------VVLRGMVLSCQLGTALVDM-------------------------- 254
+V G + L D
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 255 ----YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
Y K G + ARL+F++M+ R+ ++W+ MI G E+A +LF M N D
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP-NRDAHS 345
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
N ++ + G V+ YF + H V + +++ Y + +EA +
Sbjct: 346 WNM-----MVSGYASVGNVELARHYFEKTPEKH-----TVSWNSIIAAYEKNKDYKEAVD 395
Query: 371 FIQSMPV---NPDPIVWRTLLSACS 392
M + PDP +LLSA +
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSAST 420
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 231/493 (46%), Gaps = 48/493 (9%)
Query: 7 SNKNQCLSLLNLCRSIDQLHQIQAQFHI----HGHYHNTYLLSELVYVCSLSPSKNLTHA 62
SN+ S+L C S+ ++ Q H G N Y+ S L+ + + + + A
Sbjct: 225 SNQYTFPSVLTACASVSAC-RVGVQVHCCIVKSGFKTNIYVQSALIDM--YAKCREMESA 281
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R L+ +SWN +I G EA+ +F +M ER +K + T P +L C A+
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341
Query: 123 -SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
+ ++ H VK G + V N L++ Y + + A KVF+ M E+ +SW ++
Sbjct: 342 RTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTAL 401
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+T N + ++ F MR G PD+ +LSA AEL L G+ VH + G
Sbjct: 402 VTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGF 461
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
S + +LV MY K G+L A ++F ME R+++TW+ +I+G A++G E+A
Sbjct: 462 PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDA------ 515
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
RYF M V+GI P HY M+D++GR
Sbjct: 516 -------------------------------QRYFDSMRTVYGITPGPEHYACMIDLFGR 544
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
+G + + + M V PD VW+ +L+A H + G++ K L+ +EP
Sbjct: 545 SGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIEN---GERAAKTLMELEPNNAVPY 601
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY 481
V ++N+Y+ AG + AANVRR+M+ + K G S V+ G + F + P ++ +Y
Sbjct: 602 VQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIY 661
Query: 482 HLLDGLNLHLKMA 494
+D + L +K A
Sbjct: 662 SKVDEMMLLIKEA 674
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 186/361 (51%), Gaps = 24/361 (6%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNK 109
+ + S S+ L+ A KL + + ISWN LI G+ S S +EA +F +M+ G+KPN+
Sbjct: 66 IVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNE 125
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDE 169
T +L+ C L G+Q+H +K G D DV V N L+ Y +CK+I +A +F+
Sbjct: 126 YTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFET 185
Query: 170 MP-ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSL 228
M E+ V+W S++T +N + +E F +R G + ++ + +L+ACA + +
Sbjct: 186 MEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Query: 229 GRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
G VHC +V G + + +AL+DMY K + AR + E ME +V++W++MI+G +
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 289 HGFAEEALSLFEMMSEN----HDNIRPNYVTYLGV------LCACSHAGMVDEGYRYFRE 338
G EALS+F M E D P+ + + + + +H +V GY ++
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL 365
Query: 339 MEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHD 398
+ A+VD+Y + G++ A + + M + D I W L++ + + ++D
Sbjct: 366 VN------------NALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYD 412
Query: 399 R 399
Sbjct: 413 E 413
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
+ D + N +I Y +++ DA K+F P + +SWN++I+ ++ + F +
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGA 260
M+ G +P+E ++ +L C L L G +H + G L + L+ MY +
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 261 LGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGV 319
+ A +FE ME ++N +TW++M+ G +Q+GFA +A+ F + + + N T+ V
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN--QSNQYTFPSV 233
Query: 320 LCACSHAGMVDEGYRYFREMEYVH------GIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
L AC+ G + VH G K + A++D+Y + + A ++
Sbjct: 234 LTACASVSACRVGVQ-------VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE 286
Query: 374 SMPVNPDPIVWRTLLSAC 391
M V+ D + W +++ C
Sbjct: 287 GMEVD-DVVSWNSMIVGC 303
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 228/454 (50%), Gaps = 41/454 (9%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA-LREGKQVHA 133
+WNI+I G A + +F++M E KP+ TF L+ C+ S+ + G+ VHA
Sbjct: 170 FAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHA 229
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE------ 187
+K G S V N++++FY + DA + + + T VSWNS+I AC++
Sbjct: 230 VMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEK 289
Query: 188 -----------NL--WL-------RDG-----VEYFLKMRGSGFEPDETSMVLMLSACAE 222
N+ W R+G + +F++M SG + D + +L AC+
Sbjct: 290 ALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSG 349
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
L L G+ +H ++ G +G ALV++Y K G + A F + +++++W+ M
Sbjct: 350 LALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTM 409
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV 342
+ HG A++AL L++ M + I+P+ VT++G+L CSH+G+V+EG F M
Sbjct: 410 LFAFGVHGLADQALKLYDNMIAS--GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS----MPVNPDPIVWRTLLSACSVHDAHD 398
+ I + H M+D++GR G L EA + + + + + W TLL ACS H
Sbjct: 468 YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACST---HW 524
Query: 399 RTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCV 458
T +G +V K L + EP + V+++NLY G W+ +VRR M + GMKK G S +
Sbjct: 525 HTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Query: 459 DLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLK 492
++G + F G S P L + L+ L ++
Sbjct: 585 EVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 183/425 (43%), Gaps = 89/425 (20%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNK 109
+ SL+ S + AR++ ++WN ++ ++ EAI +F ++R KP+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 110 LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD- 168
+F +L CA ++ G+++ + ++ G + + V N+LI+ YG+C L A KVF
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 169 --------------------------------EMPERTPVSWNSVITACVENLWLRDGVE 196
EMP+R +WN +I+ L +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 197 YFLKMRGSGFEPDETSMVLMLSAC-AELGYLSLGRWVHCQVVLRG---------MVLS-- 244
F +M S F+PD + +++AC A+ + GR VH ++ G VLS
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 245 CQLGT--------------------ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMIL 284
+LG+ +++D K G A VF ++N++TW+ MI
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 285 GLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH 343
G ++G E+AL F EMM D+ ++ Y VL ACS ++ G + +H
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDS---DHFAYGAVLHACSGLALLGHG-------KMIH 360
Query: 344 GIKPLMVHYG---------AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
G ++H G A+V++Y + G ++EA + N D + W T+L A VH
Sbjct: 361 GC---LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI-ANKDLVSWNTMLFAFGVH 416
Query: 395 DAHDR 399
D+
Sbjct: 417 GLADQ 421
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
T+ + KSG + AR VF+ M + + + W+ M+ ++ G +EA++LF + +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL--RFSD 65
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+P+ ++ +L C+ G V G R + + G + +++D+YG+ A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFG-RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 369 YEFIQSMPVNP-DPIVWRTLLSA 390
+ + M + + + W +LL A
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFA 147
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 202/406 (49%), Gaps = 28/406 (6%)
Query: 55 PSKNLTH----------ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFR-----K 99
PS +L H AR++ + WN L+ + + EA + + K
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 100 MRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK 159
R RG + TF LL C + +GKQ+HA K D+ V L+N Y +
Sbjct: 239 NRFRG---DYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 160 ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
+ DAR+ F+ M R VSWN++I +N R+ + F +M +PDE + +LS+
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTW 279
CA+ + + V V +G + +L+ Y ++G L A L F + + ++++W
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSW 411
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
+++I LA HGFAEE+L +FE M + ++P+ +T+L VL ACSH G+V EG R F+ M
Sbjct: 412 TSVIGALASHGFAEESLQMFESMLQ---KLQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
Query: 340 EYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
+ I+ HY ++D+ GRAG + EA + + SMP P C++H+ +
Sbjct: 469 TEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRES 528
Query: 400 TGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
G K+LL +EP + N I++N Y G W +AA +R+ R
Sbjct: 529 MKWG---AKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRER 571
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 24/389 (6%)
Query: 18 LCRSIDQLHQIQAQ--FHI-HGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSP 74
L S+D L ++ + F + G Y++ +L ++L+ + + + A KL +
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQ--AYTKIREFDDADKLFDEMPLRNI 102
Query: 75 ISWNILIRGFATSDSPIE-----AIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
++WNILI G D ++ V + ++F L++ C + ++ G
Sbjct: 103 VTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
Q+H VK GL+S + +L++FYG+C I++AR+VF+ + +R V WN+++++ V N
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLN- 221
Query: 190 WLRDGVEYFLKMRGSG---FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ D LK+ GS F D + +LSAC + G+ +H +
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIP 277
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSEN 305
+ TAL++MY KS L AR FE M RNV++W+AMI+G AQ+G EA+ LF +M+ E
Sbjct: 278 VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE- 336
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
N++P+ +T+ VL +C+ + E + + M G + +++ Y R G L
Sbjct: 337 --NLQPDELTFASVLSSCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGNL 393
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVH 394
EA S+ PD + W +++ A + H
Sbjct: 394 SEALLCFHSIR-EPDLVSWTSVIGALASH 421
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 5/259 (1%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
SLL+ CR I+Q QI A + + + + L+ + + S +L+ AR+ +
Sbjct: 250 SLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNM--YAKSNHLSDARECFESMVVRN 306
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
+SWN +I GFA + EA+ +F +M ++P++LTF +L CA SA+ E KQV A
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
K G + V N+LI+ Y R + +A F + E VSW SVI A + + +
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEE 426
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG-RWVHCQVVLRGMVLSCQLGTALV 252
++ F M +PD+ + + +LSAC+ G + G R + + T L+
Sbjct: 427 SLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLI 485
Query: 253 DMYGKSGALGYARLVFERM 271
D+ G++G + A V M
Sbjct: 486 DLLGRAGFIDEASDVLNSM 504
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 211/411 (51%), Gaps = 11/411 (2%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
P+ +SWN +I G + + +A+ ++R++ R +P++ TF + A GK
Sbjct: 364 PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKL 423
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H K G + V+VG L++ Y + ++ A+KVFD M ER V W +I
Sbjct: 424 LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN 483
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
V++F++M D S+ ++ AC+++ L G HC + G + A
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGA 543
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
LVDMYGK+G A +F ++ W++M+ +QHG E+ALS FE + EN
Sbjct: 544 LVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILEN--GFM 601
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
P+ VTYL +L ACSH G +G + +M+ GIK HY MV++ +AGL+ EA E
Sbjct: 602 PDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALE 660
Query: 371 FI-QSMPVNPDPIVWRTLLSACSVHDAHDRT-GIGDKVRKELLLVEPRRGGNLVIVANLY 428
I QS P N +WRTLLSAC + R IG +++L ++P ++++NLY
Sbjct: 661 LIEQSPPGNNQAELWRTLLSAC----VNTRNLQIGLYAAEQILKLDPEDTATHILLSNLY 716
Query: 429 AEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYD-SRPDLI 478
A G WE A +RR +R K G S +++ + + F+ D S P+++
Sbjct: 717 AVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVV 767
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 163/322 (50%), Gaps = 17/322 (5%)
Query: 11 QCLSLLNLCRSIDQLHQI----QAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
+C+S+ L R+ Q+H + A Y N L+S V SL ARK+
Sbjct: 103 KCVSITVLKRA-RQIHALVLTAGAGAATESPYANNNLISMYVRCGSLE------QARKVF 155
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVF---RKMRERGVKPNKLTFPFLLKCCAVGS 123
+ +S+N L + S +P A + F M VKPN TF L++ CAV
Sbjct: 156 DKMPHRNVVSYNALYSAY--SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVIT 183
+ G +++ +K G +V V +++ Y C + AR++FD + R V+WN++I
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
++N + DG+ +F M SG +P + + ++L+ C++LG SLG+ +H ++++ +
Sbjct: 274 GSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
L AL+DMY G + A VF R+ N+++W+++I G +++GF E+A+ ++ +
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 304 ENHDNIRPNYVTYLGVLCACSH 325
RP+ T+ + A +
Sbjct: 394 R-MSTPRPDEYTFSAAISATAE 414
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 24/313 (7%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDV---YVGNNLINFYGRCKKILDARKVFDEMP 171
L + C + L+ +Q+HA + G + Y NNLI+ Y RC + ARKVFD+MP
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGS-GFE---PDETSMVLMLSACAELGYLS 227
R VS+N++ +A N D Y + FE P+ ++ ++ CA L +
Sbjct: 160 HRNVVSYNALYSAYSRN---PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVL 216
Query: 228 LGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLA 287
+G ++ Q++ G + + T+++ MY G L AR +F+ + R+ + W+ MI+G
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP 347
++ E+ L F M + P TY VL CS G G + +
Sbjct: 277 KNDKIEDGLMFFRNML--MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD 334
Query: 348 LMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKV- 406
L + A++D+Y G +REA+ ++ NP+ + W +++S CS G G++
Sbjct: 335 LPLD-NALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCS------ENGFGEQAM 386
Query: 407 ---RKELLLVEPR 416
R+ L + PR
Sbjct: 387 LMYRRLLRMSTPR 399
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 16/255 (6%)
Query: 145 YVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGS 204
Y NNLI+ Y RC + ARKVFD+MP+R V+ ++A E + + + + GS
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFG-LSAVFEYVSMGSSLHSQIIKLGS 81
Query: 205 ----GFEP---DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA---LVDM 254
F P +S+V + C + L R +H V+ G + + A L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH-GFAEEALSLFEMMSENHDNIRPNY 313
Y + G+L AR VF++M RNV++++A+ +++ FA A L M+ + ++PN
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA--FEYVKPNS 199
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
T+ ++ C+ V G ++ + G +V +++ +Y G L A
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKL-GYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 374 SMPVNPDPIVWRTLL 388
+ N D + W T++
Sbjct: 259 CVN-NRDAVAWNTMI 272
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 226/474 (47%), Gaps = 43/474 (9%)
Query: 21 SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNIL 80
SI L Q+ A+ G++ ++ L+ S S+ + + ++ + N +
Sbjct: 34 SITHLFQVHARLITSGNFWDSSWAIRLLK----SSSRFGDSSYTVSIYRSIGKLYCANPV 89
Query: 81 IRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGL 140
+ + S SP +A+ + + G P+ TF L+ C + GK H A+K G
Sbjct: 90 FKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGC 149
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN------LWLRD- 193
D + V N+L++ Y C + A+K+F E+P+R VSWNS+I V N L D
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 194 ------------------------GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG 229
+ F +M +GF+ +E+++VL+L+AC L G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 230 RWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH 289
R VH ++ + S + TAL+DMYGK +G AR +F+ + RN +TW+ MIL H
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 290 GFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM 349
G E L LFE M +RP+ VT++GVLC C+ AG+V +G Y+ M IKP
Sbjct: 330 GRPEGGLELFEAMINGM--LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTGIGDKV 406
H M ++Y AG EA E ++++P V P+ W LLS+ +G+ +
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRF---TGNPTLGESI 444
Query: 407 RKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
K L+ +P ++ N+Y+ G WE VR ++++ + ++ G VDL
Sbjct: 445 AKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 204/418 (48%), Gaps = 49/418 (11%)
Query: 33 HIHGHYHNTYLLSELVYVCSL----SPSKNLTHARKLVLHSATPSPISWNILIRGFATSD 88
IHG + + L++++ +L S ARK++ +SWN L+ +
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 89 SPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGN 148
EA +F +M ER V+ N
Sbjct: 221 LVDEARALFDEMEERNVES---------------------------------------WN 241
Query: 149 NLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE- 207
+I+ Y + +A++VFD MP R VSWN+++TA + +E F KM E
Sbjct: 242 FMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
PD ++V +LSACA LG LS G WVH + G+ + L TALVDMY K G + A V
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 268 FERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
F KR+V TW+++I L+ HG ++AL +F M ++ +PN +T++GVL AC+H G
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV--YEGFKPNGITFIGVLSACNHVG 419
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTL 387
M+D+ + F M V+ ++P + HYG MVD+ GR G + EA E + +P + I+ +L
Sbjct: 420 MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESL 479
Query: 388 LSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
L AC ++ +++ LL + R ++NLYA G WE+ + RR MR
Sbjct: 480 LGACKRFGQLEQ---AERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 185/386 (47%), Gaps = 49/386 (12%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPS-KNLTHARKLVLHSAT 71
LS +S+ ++ Q A G +H+T+ S+LV + +P K +++A ++ +
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ + N +IR +A S +P A+ VFR+M V P+K +F F+LK CA EG+Q+
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H +K GL +DV+V N L+N YGR ARKV D MP R VSWNS+++A +E +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+ F +M E S M+S
Sbjct: 223 DEARALFDEMEERNVE----SWNFMISG-------------------------------- 246
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
Y +G + A+ VF+ M R+V++W+AM+ A G E L +F M ++ +P
Sbjct: 247 ---YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE-KP 302
Query: 312 NYVTYLGVLCACSHAGMVDEG---YRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+ T + VL AC+ G + +G + Y + HGI+ A+VD+Y + G + +A
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDK----HGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 369 YEFIQSMPVNPDPIVWRTLLSACSVH 394
E ++ D W +++S SVH
Sbjct: 359 LEVFRATS-KRDVSTWNSIISDLSVH 383
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 204/399 (51%), Gaps = 6/399 (1%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ A KL P WN++I G+ + I +F M+ RG +PN T L
Sbjct: 157 IVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSG 216
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
S L VHA +K LDS YVG L+N Y RC I A VF+ + E V+
Sbjct: 217 LIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVAC 276
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
+S+IT ++ + F ++R SG +PD + ++L +CAEL G+ VH V+
Sbjct: 277 SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR 336
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
G+ L ++ +AL+DMY K G L A +F + ++N+++++++ILGL HGFA A
Sbjct: 337 LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F + E + P+ +T+ +LC C H+G++++G F M+ GI+P HY MV +
Sbjct: 397 FTEILEM--GLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKL 454
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHD-AHDRTGIGDKVRKELLLVEPRR 417
G AG L EA+EF+ S+ D + LLS C VH+ H + + + K E RR
Sbjct: 455 MGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKN---GEERR 511
Query: 418 GGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGES 456
V+++N+YA G W+ +R + + K+ G S
Sbjct: 512 SVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 143/322 (44%), Gaps = 9/322 (2%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+L ARKL S WN +IR +A + + +F ++ +P+ T+ L +
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
+ + + +H A+ GL D G+ ++ Y + I++A K+F +P+
Sbjct: 115 GFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN +I + G+ F M+ G +P+ +MV + S + L + VH +
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ +G ALV+MY + + A VF + + +++ S++I G ++ G +EAL
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALH 294
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCAC---SHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
LF + + +P+ V VL +C S + E + Y + IK A
Sbjct: 295 LFAELRMSGK--KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVC----SA 348
Query: 355 MVDIYGRAGLLREAYEFIQSMP 376
++D+Y + GLL+ A +P
Sbjct: 349 LIDMYSKCGLLKCAMSLFAGIP 370
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN 188
+++H+ K L D Y L FY ++ ARK+FD PER+ WNS+I A +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+ F ++ S PD + + +E R +H ++ G+ G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
+A+V Y K+G + A +F + ++ W+ MILG GF ++ ++LF +M H
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM--QHRG 202
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG----AMVDIYGRAGL 364
+PN T + + +G++D + +K + + A+V++Y R
Sbjct: 203 HQPNCYTMVALT-----SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMC 257
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACS 392
+ A S+ PD + +L++ S
Sbjct: 258 IASACSVFNSIS-EPDLVACSSLITGYS 284
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 207/422 (49%), Gaps = 40/422 (9%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ A +L +SW +I G + EA+ + +M G+KP+++ LL
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKIL----------------- 161
A +G Q+H VK G D ++ +I+FY I
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 162 --------------DARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKM-RGSGF 206
AR+VFD+ ++ SWN++I+ ++L + + F +M S
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 207 EPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARL 266
+PD +MV + SA + LG L G+ H + + + L A++DMY K G++ A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 267 VFER---MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
+F + + + W+A+I G A HG A+ AL L+ + I+PN +T++GVL AC
Sbjct: 495 IFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL--PIKPNSITFVGVLSAC 552
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIV 383
HAG+V+ G YF M+ HGI+P + HYG MVD+ G+AG L EA E I+ MPV D ++
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 384 WRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRV 443
W LLSA H I + EL ++P GG V+++N+YA+AG WE A VR
Sbjct: 613 WGMLLSASRT---HGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREE 669
Query: 444 MR 445
MR
Sbjct: 670 MR 671
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 203/485 (41%), Gaps = 106/485 (21%)
Query: 7 SNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
SN C S+LN+ L ++ F H + S + V S+ L A KL
Sbjct: 74 SNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSA---SFNIMVDGYVRSRRLWDALKLF 130
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
S +S+ LI+G+A ++ EA+ +FR+MR G+ N++T ++ C+ +
Sbjct: 131 DVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIW 190
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN------- 179
+ + + + A+K L+ V+V NL++ Y C + DARK+FDEMPER V+WN
Sbjct: 191 DCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYS 250
Query: 180 ------------------------SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
++I C+ L + + Y+ +M G +P E MV
Sbjct: 251 KAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVD 310
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYG------------------- 256
+LSA A S G +H +V RG L ++ Y
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 257 ------------KSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMS 303
K+G + AR VF++ +++ +W+AMI G AQ + AL LF EM+S
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
+ ++P+ +T + V A S G ++EG R + + I P A++D+Y + G
Sbjct: 431 SSQ--VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNF-STIPPNDNLTAAIIDMYAKCG 487
Query: 364 LLREA-------------------------------------YEFIQSMPVNPDPIVWRT 386
+ A Y +QS+P+ P+ I +
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 387 LLSAC 391
+LSAC
Sbjct: 548 VLSAC 552
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 47/277 (16%)
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRC------------------ 157
L CA + + G+Q+H +K GLDS+ Y+ N+++N Y +C
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 158 -------------KKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGS 204
+++ DA K+FD MPER+ VS+ ++I +N + +E F +MR
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 205 GFEPDETSMVLMLSACAELGYLSLGRWVHCQVV---LRGMVLSCQLGTALVDMYGKSGAL 261
G +E ++ ++SAC+ LG + R + + L G V + T L+ MY L
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF---VSTNLLHMYCLCLCL 224
Query: 262 GYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLC 321
AR +F+ M +RN++TW+ M+ G ++ G E+A LF+ ++E + V++ ++
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK------DIVSWGTMID 278
Query: 322 ACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
C +DE Y+ EM G+KP V MVD+
Sbjct: 279 GCLRKNQLDEALVYYTEMLRC-GMKPSEV---MMVDL 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 75/255 (29%)
Query: 204 SGFEPD-ETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL- 261
SG D E ++V L +CA ++ GR +HC+V+ G+ + + ++++MY K L
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93
Query: 262 ----------------------GYAR--------LVFERMEKRNVLTWSAMILGLAQHGF 291
GY R +F+ M +R+ ++++ +I G AQ+
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMV---------------------- 329
EA+ LF M + I N VT V+ ACSH G +
Sbjct: 154 WSEAMELFREM--RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVS 211
Query: 330 -------------DEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
+ + F EM + +V + M++ Y +AGL+ +A E +
Sbjct: 212 TNLLHMYCLCLCLKDARKLFDEMPERN-----LVTWNVMLNGYSKAGLIEQAEELFDQI- 265
Query: 377 VNPDPIVWRTLLSAC 391
D + W T++ C
Sbjct: 266 TEKDIVSWGTMIDGC 280
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 242/505 (47%), Gaps = 45/505 (8%)
Query: 20 RSIDQLHQIQAQFHIHGHY------HNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
+SI +L ++ +HG+ ++Y+ + L+ + + +TH K+
Sbjct: 54 KSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITH--KVFDEMPQRD 111
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+SWN LI + + +AI VF++M +E +K ++ T L C+ L G++++
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY 171
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP--------------------- 171
V + V +GN L++ + +C + AR VFD M
Sbjct: 172 RFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRID 230
Query: 172 ------ERTPVS----WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
ER+PV W +++ V+ + +E F M+ +G PD +V +L+ CA
Sbjct: 231 EARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCA 290
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
+ G L G+W+H + + + +GTALVDMY K G + A VF +++R+ +W++
Sbjct: 291 QTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTS 350
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY 341
+I GLA +G + AL L+ M + +R + +T++ VL AC+H G V EG + F M
Sbjct: 351 LIYGLAMNGMSGRALDLYYEME--NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTG 401
H ++P H ++D+ RAGLL EA E I M D + S S +
Sbjct: 409 RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVK 468
Query: 402 IGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLG 461
I ++V ++L VE ++A++YA A WE NVRR M+D G++K G S +++
Sbjct: 469 IAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEID 528
Query: 462 GSMIRFFAGYD--SRPDLIPVYHLL 484
G F G D S P + + +L
Sbjct: 529 GVGHEFIVGDDLLSHPKMDEINSML 553
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 174/354 (49%), Gaps = 45/354 (12%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
TPS + +N +++ A S + + +F ++R +G+ P+ T P +LK + EG++
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
VH AVK GL+ D YV N+L+ Y KI KVFDEMP+R VSWN +I++ V N
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 191 LRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
D + F +M + S + DE ++V LSAC+ L L +G ++ + V+ +S ++G
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGN 186
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE--------- 300
ALVDM+ K G L AR VF+ M +NV W++M+ G G +EA LFE
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 301 ---MMSE-----------------NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
MM+ IRP+ + +L C+ G +++G +
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-------K 299
Query: 341 YVHG------IKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
++HG + V A+VD+Y + G + A E + D W +L+
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 208/393 (52%), Gaps = 11/393 (2%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
++ L S ++WN + G + + I A+ MR V+ + LK C+
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 124 ALREGKQVHADAVK---FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
AL+ GK H ++ F D D V N+LI Y RC + A VF ++ + +WNS
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+I+ N + +M SGF P+ ++ +L A +G L G+ HC ++ R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 241 MVLSCQ-LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
C L +LVDMY KSG + A+ VF+ M KR+ +T++++I G + G E AL+ F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
+ M + I+P++VT + VL ACSH+ +V EG+ F +ME+V GI+ + HY MVD+Y
Sbjct: 514 KDM--DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL-VEPRRG 418
RAG L +A + ++P P + TLL AC + H T IG+ +LLL +P
Sbjct: 572 CRAGYLDKARDIFHTIPYEPSSAMCATLLKACLI---HGNTNIGEWAADKLLLETKPEHL 628
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKK 451
G+ +++A++YA G W + V+ ++ D G++K
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 193/433 (44%), Gaps = 55/433 (12%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIH----GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS 69
SLL+ C ++ Q Q H H G ++ L+ +LV S L A+ + +S
Sbjct: 88 SLLSTCVGFNEFVPGQ-QLHAHCISSGLEFDSVLVPKLVTF--YSAFNLLDEAQTITENS 144
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
P+ WN+LI + + E++ V+++M +G++ ++ T+P ++K CA G+
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
VH ++YV N LI+ Y R K+ AR++FD M ER VSWN++I
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 190 WLRDGVEYFLKMRGSGFEPD-----------------------------------ETSMV 214
L + + +M SG E +M+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG---TALVDMYGKSGALGYARLVFERM 271
L AC+ +G L G+ HC +V+R S + +L+ MY + L +A +VF+++
Sbjct: 325 NGLKACSHIGALKWGKVFHC-LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 272 EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDE 331
E ++ TW+++I G A + +EE L + M + PN++T +L + G +
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASILPLFARVGNLQH 441
Query: 332 GYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSAC 391
G + + K ++ + ++VD+Y ++G + A SM D + + +L+
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI--- 497
Query: 392 SVHDAHDRTGIGD 404
D + R G G+
Sbjct: 498 ---DGYGRLGKGE 507
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 51/394 (12%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
LL C + G+Q+HA + GL+ D + L+ FY + +A+ + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
P+ WN +I + + N ++ V + +M G DE + ++ ACA L + GR VH
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ + + + AL+ MY + G + AR +F+RM +R+ ++W+A+I E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 295 ALSLFEMM---------------------------------SENHDNIRPNYVTYLGVLC 321
A L + M + N+R V + L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 322 ACSHAGMVDEGYRY----FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPV 377
ACSH G + G + R + H I + +++ +Y R LR A+ Q +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR---NSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 378 NPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL--VEPRRGGNLVIVANLYAEAGMWE 435
N W +++S + ++ + T + KE+LL P L + L+A G +
Sbjct: 386 NSLS-TWNSIISGFAYNERSEETSF---LLKEMLLSGFHPNH-ITLASILPLFARVGNLQ 440
Query: 436 RAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
+ +++ + + C+ L S++ +A
Sbjct: 441 HGKEFHCYI----LRRQSYKDCLILWNSLVDMYA 470
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S +L HA + S +WN +I GFA ++ E ++ ++M G PN +T
Sbjct: 368 SRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLA 427
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYV-GNNLINFYGRCKKILDARKVFDEMPE 172
+L A L+ GK+ H ++ D + N+L++ Y + +I+ A++VFD M +
Sbjct: 428 SILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK 487
Query: 173 RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWV 232
R V++ S+I + +F M SG +PD +MV +LSAC+ + G W+
Sbjct: 488 RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 233 HCQVV-LRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
++ + G+ L + + +VD+Y ++G L AR +F +
Sbjct: 548 FTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 208/393 (52%), Gaps = 11/393 (2%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
++ L S ++WN + G + + I A+ MR V+ + LK C+
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 124 ALREGKQVHADAVK---FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
AL+ GK H ++ F D D V N+LI Y RC + A VF ++ + +WNS
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+I+ N + +M SGF P+ ++ +L A +G L G+ HC ++ R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 241 MVLSCQ-LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
C L +LVDMY KSG + A+ VF+ M KR+ +T++++I G + G E AL+ F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
+ M + I+P++VT + VL ACSH+ +V EG+ F +ME+V GI+ + HY MVD+Y
Sbjct: 514 KDM--DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL-VEPRRG 418
RAG L +A + ++P P + TLL AC + H T IG+ +LLL +P
Sbjct: 572 CRAGYLDKARDIFHTIPYEPSSAMCATLLKACLI---HGNTNIGEWAADKLLLETKPEHL 628
Query: 419 GNLVIVANLYAEAGMWERAANVRRVMRDGGMKK 451
G+ +++A++YA G W + V+ ++ D G++K
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 193/433 (44%), Gaps = 55/433 (12%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIH----GHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHS 69
SLL+ C ++ Q Q H H G ++ L+ +LV S L A+ + +S
Sbjct: 88 SLLSTCVGFNEFVPGQ-QLHAHCISSGLEFDSVLVPKLVTF--YSAFNLLDEAQTITENS 144
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
P+ WN+LI + + E++ V+++M +G++ ++ T+P ++K CA G+
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
VH ++YV N LI+ Y R K+ AR++FD M ER VSWN++I
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 190 WLRDGVEYFLKMRGSGFEPD-----------------------------------ETSMV 214
L + + +M SG E +M+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG---TALVDMYGKSGALGYARLVFERM 271
L AC+ +G L G+ HC +V+R S + +L+ MY + L +A +VF+++
Sbjct: 325 NGLKACSHIGALKWGKVFHC-LVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 272 EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDE 331
E ++ TW+++I G A + +EE L + M + PN++T +L + G +
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASILPLFARVGNLQH 441
Query: 332 GYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSAC 391
G + + K ++ + ++VD+Y ++G + A SM D + + +L+
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLI--- 497
Query: 392 SVHDAHDRTGIGD 404
D + R G G+
Sbjct: 498 ---DGYGRLGKGE 507
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 51/394 (12%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
LL C + G+Q+HA + GL+ D + L+ FY + +A+ + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
P+ WN +I + + N ++ V + +M G DE + ++ ACA L + GR VH
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ + + + AL+ MY + G + AR +F+RM +R+ ++W+A+I E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 295 ALSLFEMM---------------------------------SENHDNIRPNYVTYLGVLC 321
A L + M + N+R V + L
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 322 ACSHAGMVDEGYRY----FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPV 377
ACSH G + G + R + H I + +++ +Y R LR A+ Q +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR---NSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 378 NPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL--VEPRRGGNLVIVANLYAEAGMWE 435
N W +++S + ++ + T + KE+LL P L + L+A G +
Sbjct: 386 NSLS-TWNSIISGFAYNERSEETSF---LLKEMLLSGFHPNH-ITLASILPLFARVGNLQ 440
Query: 436 RAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
+ +++ + + C+ L S++ +A
Sbjct: 441 HGKEFHCYI----LRRQSYKDCLILWNSLVDMYA 470
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 54 SPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFP 113
S +L HA + S +WN +I GFA ++ E ++ ++M G PN +T
Sbjct: 368 SRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLA 427
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYV-GNNLINFYGRCKKILDARKVFDEMPE 172
+L A L+ GK+ H ++ D + N+L++ Y + +I+ A++VFD M +
Sbjct: 428 SILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK 487
Query: 173 RTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWV 232
R V++ S+I + +F M SG +PD +MV +LSAC+ + G W+
Sbjct: 488 RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 233 HCQVV-LRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
++ + G+ L + + +VD+Y ++G L AR +F +
Sbjct: 548 FTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 227/458 (49%), Gaps = 40/458 (8%)
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
ISWN LI G+A + EA+ + M E G+K ++ +F +L + +L+ GK+VHA
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCK-------------------------------KILD 162
+K G S+ +V + +++ Y +C K+++
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 163 ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK--MRGSGFEPDETSMVLMLSAC 220
A+++FD + E+ V W ++ + NL D V + + PD MV +L AC
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSVLGAC 403
Query: 221 AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWS 280
+ Y+ G+ +H + G+++ +L TA VDMY K G + YA +F+ +R+ + ++
Sbjct: 404 SLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYN 463
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
AMI G A HG ++ FE M+E +P+ +T++ +L AC H G+V EG +YF+ M
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDMTEG--GFKPDEITFMALLSACRHRGLVLEGEKYFKSMI 521
Query: 341 YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM-PVNPDPIVWRTLLSACSVHDAHDR 399
+ I P HY M+D+YG+A L +A E ++ + V D ++ L+ACS +
Sbjct: 522 EAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACS---WNKN 578
Query: 400 TGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVD 459
T + +V ++LL++E G + +AN YA +G W+ +R MR ++ +G S +
Sbjct: 579 TELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWAN 638
Query: 460 LGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHLKMANEL 497
+ F + S + +Y +L + L +E+
Sbjct: 639 IDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSEIDEI 676
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 169/416 (40%), Gaps = 91/416 (21%)
Query: 58 NLTHARKLVLHSATPSP-ISWNILIRGFATSDS-PIEAIWVFRKMRER---GVKPNKLTF 112
N+ AR+L I++N L+ GFA +D EAI +F +M + + + T
Sbjct: 69 NVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTV 128
Query: 113 PFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK------------- 159
++K A + + G+Q+H VK G D + ++LI+ Y +C K
Sbjct: 129 TTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 160 --------------------ILDARKVFDEMPE-RTPVSWNSVITACVENLWLRDGVEYF 198
I A VF PE +SWN++I +N + + ++
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 199 LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKS 258
+ M +G + DE S +L+ + L L +G+ VH +V+ G + + + +VD+Y K
Sbjct: 249 VSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKC 308
Query: 259 GALGY-------------------------------ARLVFERMEKRNVLTWSAMILGLA 287
G + Y A+ +F+ + ++N++ W+AM LG
Sbjct: 309 GNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHG--- 344
+ L L N N P+ + + VL ACS ++ G + +HG
Sbjct: 369 NLRQPDSVLELARAFIANETNT-PDSLVMVSVLGACSLQAYMEPG-------KEIHGHSL 420
Query: 345 ------IKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
K L+ A VD+Y + G + A E I D +++ +++ C+ H
Sbjct: 421 RTGILMDKKLVT---AFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHH 472
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 9/256 (3%)
Query: 33 HIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIE 92
H+ + N Y S ++ S + A++L + + + W + G+ P
Sbjct: 318 HLLYGFGNLYSASSMI--VGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 93 AIWVFRK-MRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+ + R + P+ L +L C++ + + GK++H +++ G+ D + +
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFV 435
Query: 152 NFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
+ Y +C + A ++FD ER V +N++I C + ++F M GF+PDE
Sbjct: 436 DMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEI 495
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG--TALVDMYGKSGALGYARLVFE 269
+ + +LSAC G + G + + ++ +S + G T ++D+YGK+ L A E
Sbjct: 496 TFMALLSACRHRGLVLEGE-KYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA---IE 551
Query: 270 RMEKRNVLTWSAMILG 285
ME + + A+ILG
Sbjct: 552 LMEGIDQVEKDAVILG 567
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 95/251 (37%), Gaps = 70/251 (27%)
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
L++G H ++K G N L+N Y + + +AR VFDEM ER SWN+VI A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 185 CVE--------NLWLRDGVEY-----------FLKMRGSGFEP----------------- 208
V+ L+ D E F K G E
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL------- 261
D+ ++ M+ A+L + G +H +V G + ++L+ MY K G
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 262 ------------------GYAR--------LVFERM-EKRNVLTWSAMILGLAQHGFAEE 294
Y R VF R E + ++W+ +I G AQ+G+ EE
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 295 ALSLFEMMSEN 305
AL + M EN
Sbjct: 244 ALKMAVSMEEN 254
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTW 279
C + G+L H + + G L+ LV++Y KSG L AR VF+ M +RNV +W
Sbjct: 3 CLKDGFLH-----HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSW 57
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHA-GMVDEGYRYFRE 338
+A+I + +EA LFE DN + +TY +L + G E F E
Sbjct: 58 NAVIAAYVKFNNVKEARELFE-----SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGE 112
Query: 339 M 339
M
Sbjct: 113 M 113
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 9/378 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I G+ + + +F+ M G KP+ TF LL+ V L ++H
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGL 239
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA-CVENLWLRD 193
A+K G + +L+N Y +C + +A K+ + +R +S ++IT +N D
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV-LSCQLGTALV 252
+ F M + DE + ML C + +++GR +H + + LG +L+
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY KSG + A L FE M++++V +W+++I G +HG E+A+ L+ M H+ I+PN
Sbjct: 360 DMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM--EHERIKPN 417
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
VT+L +L ACSH G + G++ + M HGI+ H ++D+ R+G L EAY I
Sbjct: 418 DVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALI 477
Query: 373 QSMP--VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAE 430
+S V+ W L AC H + +LL +EPR+ N + +A++YA
Sbjct: 478 RSKEGIVSLSSSTWGAFLDACR---RHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAA 534
Query: 431 AGMWERAANVRRVMRDGG 448
G W+ A N R++M++ G
Sbjct: 535 NGAWDNALNTRKLMKESG 552
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 185/421 (43%), Gaps = 50/421 (11%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ HARKL + +SW +I F+ +A+ +F++M VK N+ T+ +LK
Sbjct: 62 DVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLK 121
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C L+EG Q+H K ++ V + L++ Y RC K+ +AR FD M ER VS
Sbjct: 122 SCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS 181
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN++I N F M G +PD + +L A + L + +H +
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI 241
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLA-QHGFAEEAL 296
G S L +LV+ Y K G+L A + E +KR++L+ +A+I G + Q+ +A
Sbjct: 242 KLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCAC--------------------------------- 323
+F+ M + V+ + +C
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 324 -SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP---VNP 379
+ +G +++ F EM+ + + + +++ YGR G +A + M + P
Sbjct: 362 YAKSGEIEDAVLAFEEMK-----EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 380 DPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL---VEPRRGGNLVIVANLYAEAGMWER 436
+ + + +LLSACS H +T +G K+ ++ +E R +L + ++ A +G E
Sbjct: 417 NDVTFLSLLSACS-HTG--QTELGWKIYDTMINKHGIEARE-EHLSCIIDMLARSGYLEE 472
Query: 437 A 437
A
Sbjct: 473 A 473
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 115/220 (52%), Gaps = 6/220 (2%)
Query: 105 VKPNKLTFPFL----LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKI 160
V N L P L LK C+ + ++ +H +++ G S++ + + LI+ Y + +
Sbjct: 4 VSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDV 63
Query: 161 LDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSAC 220
ARK+FD + +R VSW ++I+ + D + F +M + ++ + +L +C
Sbjct: 64 KHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSC 123
Query: 221 AELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWS 280
+LG L G +H V + + +AL+ +Y + G + ARL F+ M++R++++W+
Sbjct: 124 KDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWN 183
Query: 281 AMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
AMI G + A+ + SLF++M + +P+ T+ +L
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLT--EGKKPDCFTFGSLL 221
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H + G + QL L+D+Y K G + +AR +F+R+ KR+V++W+AMI ++ G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
+AL LF+ M + ++++ N TY VL +C G + EG + +E + L+V
Sbjct: 94 HPDALLLFKEM--HREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
A++ +Y R G + EA SM D + W ++ + + D +
Sbjct: 152 -SALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTANACADTS 198
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 218/462 (47%), Gaps = 37/462 (8%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRE-RGVKPNKLTFPFLL 116
N+ ARK+ + +SWN +I G++ S S + +++ M KPN +T +
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
+ C S L G +VH ++ + D+ + N +I FY +C + AR +FDEM E+ V
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 177 S-------------------------------WNSVITACVENLWLRDGVEYFLKMRGSG 205
+ WN++I+ ++N + + F +M G
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
P+ ++ +L + L G+ +H + G + + T+++D Y K G L A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 266 LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
VF+ + R+++ W+A+I A HG ++ A SLF+ M +P+ VT VL A +H
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM--QCLGTKPDDVTLTAVLSAFAH 479
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWR 385
+G D F M + I+P + HY MV + RAG L +A EFI MP++P VW
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 386 TLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
LL+ SV + I L +EP GN I+ANLY +AG WE A VR M+
Sbjct: 540 ALLNGASVLGDLE---IARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Query: 446 DGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
G+KK+ G S ++ + F A S +Y +++GL
Sbjct: 597 RIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGL 638
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRK------MRERGVKPNKLTFPFLLKCCA------ 120
+ S+N L+ + + + +A +F +P+ ++ +LK +
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
+GS R QVH ++ G DSDV+VGN +I +Y +C I ARKVFDEM ER VSWNS
Sbjct: 147 LGSLAR---QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNS 203
Query: 181 VITACVENLWLRDGVEYFLKMRG-SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+I+ ++ D + + M S F+P+ +++ + AC + L G VH +++
Sbjct: 204 MISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN 263
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
+ + L A++ Y K G+L YAR +F+ M +++ +T+ A+I G HG +EA++LF
Sbjct: 264 HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 300 E-----------------MMSENHDNI------------RPNYVTYLGVLCACSHAGMVD 330
M + +H+ + RPN VT +L + +++ +
Sbjct: 324 SEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL- 382
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+G + +G + +++D Y + G L A + + I W +++A
Sbjct: 383 KGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITA 441
Query: 391 CSVHDAHD 398
+VH D
Sbjct: 442 YAVHGDSD 449
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 12/274 (4%)
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
Q+HA V F + D ++ + LI+FY R + A VFDE+ R S+N+++ A
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 190 WLRDGVEYFLKMRGS------GFEPDETSMVLM---LSACAELGYLSLGRWVHCQVVLRG 240
D FL GS PD S+ + LS C + SL R VH V+ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
+G ++ Y K + AR VF+ M +R+V++W++MI G +Q G E+ +++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M D +PN VT + V AC + + G ++M H I+ + A++ Y
Sbjct: 223 AMLACSD-FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYA 280
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
+ G L A M D + + ++S H
Sbjct: 281 KCGSLDYARALFDEMS-EKDSVTYGAIISGYMAH 313
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 180/352 (51%), Gaps = 6/352 (1%)
Query: 144 VYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRG 203
V N +I +G +I AR+VFD M +R +W +I A + + ++ F +M+
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
G P S++ +LS CA L L GR VH +V + + L+ MY K G L
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 264 ARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
A+LVF+R ++++ W+++I G A HG EEAL +F M + PN VT + +L AC
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSS--GTMPNKVTLIAILTAC 442
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIV 383
S+AG ++EG F ME + P + HY VD+ GRAG + +A E I+SM + PD V
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 384 WRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRV 443
W LL AC H R + + K+L EP G V+++++ A W A VR+
Sbjct: 503 WGALLGACK---THSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKN 559
Query: 444 MRDGGMKKMAGESCVDLGGSMIRFF-AGYDSRPDLIPVYHLLDGLNLHLKMA 494
MR + K G S +++G + F G + P+ + +L+ + L+ A
Sbjct: 560 MRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREA 611
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
++ AR++ +W +I+ + +EA+ +F +M+++GV+P+ + +L
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA ++L+ G+QVHA V+ D DVYV + L+ Y +C +++ A+ VFD + + W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
NS+I+ + + ++ F +M SG P++ +++ +L+AC+ G L G + +
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 239 RGMVL-SCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGFAEEAL 296
+ V + + + VDM G++G + A + E M K + W A++ H + A
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
+ + EN + YV + + S G V + R + G V
Sbjct: 521 VAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKV 580
Query: 357 DIYGRAGL 364
++ R G+
Sbjct: 581 HMFTRGGI 588
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 155/355 (43%), Gaps = 65/355 (18%)
Query: 41 TYLLSELVYVCSLSPSK-----NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
TYL S V CS S+ + ARK + SWN ++ G+ ++ P EA
Sbjct: 11 TYLTSTGVN-CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQ 69
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
+F +M ER +V N L++ Y
Sbjct: 70 LFDEMSER---------------------------------------NVVSWNGLVSGYI 90
Query: 156 RCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
+ + I++AR VF+ MPER VSW +++ ++ + + F +M E +E S +
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTV 146
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN 275
M + G + R ++ + ++ +V S T ++ + G + ARL+F+ M +RN
Sbjct: 147 MFGGLIDDGRIDKARKLYDMMPVKDVVAS----TNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 276 VLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
V+TW+ MI G Q+ + A LFE+M E + V++ +L + +G +++ +
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTE------VSWTSMLLGYTLSGRIEDAEEF 256
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
F M +KP+ + AM+ +G G + +A M + D WR ++ A
Sbjct: 257 FEVMP----MKPV-IACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKA 305
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 158/392 (40%), Gaps = 74/392 (18%)
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
AR+L + + +SWN L+ G+ + +EA VF M ER V ++
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGM 125
Query: 121 VGSA------LREGKQVHADAVKFGLDS-----------------DVYVGNNLINFYGRC 157
VG A + E +V + GL DV N+I R
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE 185
Query: 158 KKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLML 217
++ +AR +FDEM ER V+W ++IT +N + V+ K+ E E S ML
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQN----NRVDVARKLFEVMPEKTEVSWTSML 241
Query: 218 SACAELGYLSLGRWVHCQVVLRGM----VLSCQLGTALVDMYGKSGALGYARLVFERMEK 273
LGY GR + M V++C A++ +G+ G + AR VF+ ME
Sbjct: 242 -----LGYTLSGRIEDAEEFFEVMPMKPVIACN---AMIVGFGEVGEISKARRVFDLMED 293
Query: 274 RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
R+ TW MI + GF EAL LF M + +RP++ + + +L C+ + G
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQ--GVRPSFPSLISILSVCATLASLQYGR 351
Query: 334 R--------YFREMEYVHGIKPLM----------------------VHYGAMVDIYGRAG 363
+ F + YV + M + + +++ Y G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 364 LLREAYEFIQSMPVN---PDPIVWRTLLSACS 392
L EA + MP + P+ + +L+ACS
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSL-----SPSKNLTHARKLVL 67
+S+L++C + L +Q +H H + VYV S+ L A+ +
Sbjct: 335 ISILSVCAT---LASLQYGRQVHAHLVRCQFDDD-VYVASVLMTMYVKCGELVKAKLVFD 390
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
++ I WN +I G+A+ EA+ +F +M G PNK+T +L C+ L E
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 128 GKQVHAD-AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS-WNSVITAC 185
G ++ KF + V + ++ GR ++ A ++ + M + + W +++ AC
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Query: 186 VENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+ L D E K EPD ++LS+ S +W VV + M
Sbjct: 511 KTHSRL-DLAEVAAKKLFEN-EPDNAGTYVLLSSINA----SRSKWGDVAVVRKNM 560
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 202/390 (51%), Gaps = 10/390 (2%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA---VGSALREGK 129
+ +SW +I G + + + +FR M+ ++PN++T +L C GS+L K
Sbjct: 215 NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV--K 272
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
++H + + G +D + + Y RC + +R +F+ R V W+S+I+ E
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ + +MR G E + +++ ++SAC LS VH Q++ G + LG
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
AL+DMY K G+L AR VF + ++++++WS+MI HG EAL +F+ M + +
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
+ + +L +L AC+HAG+V+E F + H + + HY +++ GR G + +A+
Sbjct: 453 --DDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGKIDDAF 509
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
E +MP+ P +W +LLSAC H D G + EL+ EP N V+++ ++
Sbjct: 510 EVTINMPMKPSARIWSSLLSACETHGRLDVA--GKIIANELMKSEPDNPANYVLLSKIHT 567
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVD 459
E+G + A VRRVM+ + K G S ++
Sbjct: 568 ESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 157/334 (47%), Gaps = 8/334 (2%)
Query: 81 IRGFATSDSPIEAIWVFR-KMRERGVKPNKLTFPFLLKCCAVGSA-LREGKQVHADAVKF 138
++G + EA+ +++ K+ G P ++K CA G Q+H +K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 139 GLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYF 198
G D D V N+LI+ Y + + RKVFDEM R VS+ S+I +C ++ L + ++
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 199 LKMRGSGFEPDETSMVLMLSACAELGYLS-LGRWVHCQVVL-RGMVLSCQLGTALVDMYG 256
+M GF P + +L+ C +G S + R H V++ M S L TALVDMY
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 257 KSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTY 316
K A VF++ME +N ++W+AMI G + E + LF M +N+RPN VT
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM--QRENLRPNRVTL 254
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
L VL AC + + HG A + +Y R G + + ++
Sbjct: 255 LSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 377 VNPDPIVWRTLLSA-CSVHDAHDRTGIGDKVRKE 409
V D ++W +++S D + + +++RKE
Sbjct: 315 VR-DVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 203/388 (52%), Gaps = 15/388 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN L+ GF + EA+ VF M V+ ++ T ++K CA L++GKQVHA
Sbjct: 151 VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT-PVSWNSVITACVENLWLRD 193
V G D V +G +I+FY I +A KV++ + T V NS+I+ C+ N R+
Sbjct: 211 VVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN---RN 266
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
E FL M S P+ + L+ C++ L +G+ +HC + G V +L L+D
Sbjct: 267 YKEAFLLM--SRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMD 324
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MYGK G + AR +F + ++V++W++MI A +G +AL +F M E + PN
Sbjct: 325 MYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
VT+L V+ AC+HAG+V EG F M+ + + P HY +DI +AG E + ++
Sbjct: 385 VTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVE 444
Query: 374 SMPVNPDP----IVWRTLLSACSVHDAHDRTGIGDKVRKELL-LVEPRRGGNLVIVANLY 428
M N + +W +LSACS++ R G+ V + L+ P V+V+N Y
Sbjct: 445 RMMENDNQSIPCAIWVAVLSACSLNMDLTR---GEYVARRLMEETGPENASIYVLVSNFY 501
Query: 429 AEAGMWERAANVRRVMRDGGMKKMAGES 456
A G W+ +R +++ G+ K AG S
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 137/267 (51%), Gaps = 14/267 (5%)
Query: 163 ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
A +FDE+P+R S NS +++ + + D + FL++ + + + +L AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
L Y GR VH ++ +G TAL+DMY K G L + VFE +E++++++W+A+
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV 342
+ G ++G +EAL +F M + + + T V+ C+ ++ +G + M V
Sbjct: 157 LSGFLRNGKGKEALGVFAAMY--RERVEISEFTLSSVVKTCASLKILQQG-KQVHAMVVV 213
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGI 402
G + L+V AM+ Y GL+ EA + S+ V+ D ++ +L+S C I
Sbjct: 214 TG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC----------I 262
Query: 403 GDKVRKELLLVEPRRGGNLVIVANLYA 429
++ KE L+ R+ N+ ++++ A
Sbjct: 263 RNRNYKEAFLLMSRQRPNVRVLSSSLA 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 148/313 (47%), Gaps = 19/313 (6%)
Query: 87 SDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYV 146
S +P + + +F ++ + TF +L C++ S G+QVHA +K G ++
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 147 GNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGF 206
LI+ Y + ++D+ +VF+ + E+ VSWN++++ + N ++ + F M
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 207 EPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARL 266
E E ++ ++ CA L L G+ VH VV+ G L LGTA++ Y G + A
Sbjct: 182 EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV-LGTAMISFYSSVGLINEAMK 240
Query: 267 VFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
V+ + + + +++I G ++ +EA F +MS N+R + + S
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLLMSRQRPNVR---------VLSSSL 288
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVH----YGAMVDIYGRAGLLREAYEFIQSMPVNPDP 381
AG D + + + ++ V ++D+YG+ G + +A +++P +
Sbjct: 289 AGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSV 347
Query: 382 IVWRTLLSACSVH 394
+ W +++ A +V+
Sbjct: 348 VSWTSMIDAYAVN 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRER--GVKPNKLTFPFL 115
+ AR + + S +SW +I +A + ++A+ +FR+M E GV PN +TF +
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 116 LKCCAVGSALREGKQVHA---DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE 172
+ CA ++EGK+ + + ++ YV I+ + + + ++ + M E
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVC--FIDILSKAGETEEIWRLVERMME 448
Query: 173 RTPVS-----WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS 227
S W +V++AC N+ L G EY + P+ S+ +++S Y +
Sbjct: 449 NDNQSIPCAIWVAVLSACSLNMDLTRG-EYVARRLMEETGPENASIYVLVSNF----YAA 503
Query: 228 LGRW 231
+G+W
Sbjct: 504 MGKW 507
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 204/404 (50%), Gaps = 8/404 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ W ++I G +A+ VF +M + G + ++ CA + G VH
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
++ G D N+LI Y +C + + +F+ M ER VSWN++I+ +N+ L
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 195 VEYFLKMRGSGFEP-DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL-GTALV 252
+ F +M+ + D ++V +L AC+ G L +G+ +HC +V+R + C L TALV
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC-IVIRSFIRPCSLVDTALV 490
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K G L A+ F+ + ++V++W +I G HG + AL ++ H + PN
Sbjct: 491 DMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL--HSGMEPN 548
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
+V +L VL +CSH GMV +G + F M G++P H +VD+ RA + +A++F
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608
Query: 373 QSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAG 432
+ P V +L AC A+ +T + D + ++++ ++P G+ V + + +A
Sbjct: 609 KENFTRPSIDVLGIILDACR---ANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMK 665
Query: 433 MWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD 476
W+ + MR G+KK+ G S +++ G FF + S D
Sbjct: 666 RWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 187/382 (48%), Gaps = 16/382 (4%)
Query: 14 SLLNLCRSIDQLH---QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSA 70
SLL C S+ +L I Q ++G + Y+ S LV + + L HARK+
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL--YAKFGLLAHARKVFEEMR 108
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+ W +I ++ + EA + +MR +G+KP +T LL+ + + + +
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQC 165
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H AV +G D D+ V N+++N Y +C + DA+ +FD+M +R VSWN++I+
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ + ++ +MRG G PD+ + LS + L +GR +HCQ+V G + L TA
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+ MY K G + V E + ++V+ W+ MI GL + G AE+AL +F M ++ ++
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS 345
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYV--HGIKPLMVHYGAMVDIYGRAGLLREA 368
+ V+ +C+ G D G YV HG +++ +Y + G L ++
Sbjct: 346 SEAIA--SVVASCAQLGSFDLGASVHG---YVLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 369 YEFIQSMPVNPDPIVWRTLLSA 390
+ M D + W ++S
Sbjct: 401 LVIFERMN-ERDLVSWNAIISG 421
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 185/379 (48%), Gaps = 10/379 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I G+A+ + E + + +MR G++P++ TF L L G+ +H
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
VK G D D+++ LI Y +C K + +V + +P + V W +I+ +
Sbjct: 271 IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKA 330
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ F +M SG + ++ ++++CA+LG LG VH V+ G L +L+ M
Sbjct: 331 LIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM 390
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K G L + ++FERM +R++++W+A+I G AQ+ +AL LFE M + +
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ-QVDSF 449
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T + +L ACS AG + G + + I+P + A+VD+Y + G L A S
Sbjct: 450 TVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDS 508
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL--VEPRRGGNLVIVANLYAEAG 432
+ D + W L++ H D I ++ E L +EP L ++++ + G
Sbjct: 509 ISWK-DVVSWGILIAGYGFHGKGD---IALEIYSEFLHSGMEPNHVIFLAVLSSC-SHNG 563
Query: 433 MWERAANVRRVM-RDGGMK 450
M ++ + M RD G++
Sbjct: 564 MVQQGLKIFSSMVRDFGVE 582
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 7/299 (2%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+ + F M + P+ TFP LLK CA L G +H + G SD Y+ ++L+
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 152 NFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
N Y + + ARKVF+EM ER V W ++I + + +MR G +P
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV 148
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
+++ MLS E+ L + +H V+ G + +++++Y K +G A+ +F++M
Sbjct: 149 TLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM 205
Query: 272 EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDE 331
E+R++++W+ MI G A G E L L M D +RP+ T+ L ++
Sbjct: 206 EQRDMVSWNTMISGYASVGNMSEILKLLYRM--RGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 332 GYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
G R G M A++ +Y + G +Y ++++P N D + W ++S
Sbjct: 264 G-RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISG 320
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 239/491 (48%), Gaps = 56/491 (11%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGH------YHNTYLLSELV--YVCSLSPSKNLTHARKL 65
S+ +L +++ + ++ IHG+ +++ Y+ + L+ Y+ + L +AR +
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI----KTGYLPYARMV 282
Query: 66 VLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSAL 125
+ ++WN L+ G + + +A + +M + G+KP+ +T+
Sbjct: 283 FDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW------------- 329
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSV 181
N+L + Y K A V +M E+ VSW ++
Sbjct: 330 ----------------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+ C +N R+ ++ F+KM+ G P+ +M +L L L G+ VH + + +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
+ + TALVDMYGKSG L A +F ++ +++ +W+ M++G A G EE ++ F +
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
M E + P+ +T+ VL C ++G+V EG++YF M +GI P + H MVD+ GR
Sbjct: 488 MLEA--GMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 362 AGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
+G L EA++FIQ+M + PD +W LS+C +H + + + K L ++EP N
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLE---LAEIAWKRLQVLEPHNSANY 602
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVY 481
+++ NLY+ WE +R +MR+ ++ S + + ++ F+A + PD +Y
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 482 HLLDGLNLHLK 492
L L +K
Sbjct: 663 FELYKLVSEMK 673
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 178/369 (48%), Gaps = 41/369 (11%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+L A KL ++WN ++ S + +A+ +FR+M+ G K T LL+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C+ EG+Q+H ++ GL+S+V + N+LI Y R K+ +RKVF+ M +R S
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 178 WNSVITACVENLWL-----------------------------------RDGVEYFLKMR 202
WNS++++ + ++ +D + +M+
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 203 GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
+G +P +S+ +L A AE G+L LG+ +H ++ + + T L+DMY K+G L
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
YAR+VF+ M+ +N++ W++++ GL+ ++A +L M+ + I+P+ +T+ +
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEAL--MIRMEKEGIKPDAITWNSLASG 335
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEF---IQSMPVNP 379
+ G ++ +M+ G+ P +V + A+ + G R A + +Q V P
Sbjct: 336 YATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 380 DPIVWRTLL 388
+ TLL
Sbjct: 395 NAATMSTLL 403
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 127/240 (52%), Gaps = 4/240 (1%)
Query: 128 GKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
G +H +K GLD SD V + + FYGRC + A K+FDEMP+R ++WN ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ VE F +M+ SG + +++MV +L C+ + GR +H V+ G+ +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
+ +L+ MY ++G L +R VF M+ RN+ +W++++ + G+ ++A+ L + M
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC- 184
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
++P+ VT+ +L + G+ + + M+ + G+KP +++ G L+
Sbjct: 185 -GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVAEPGHLK 242
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 47/323 (14%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P ++WN L+ G+A+ +AI V ++M+ G+KP+ + LL+ A L+ GK +
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
H ++ L DVYV LI+ Y + + AR VFD M + V+WNS+++ L
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+D ++M G +PD + + S GY +LG+
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLAS-----GYATLGK-----------------PEKA 345
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+D+ GK G A NV++W+A+ G +++G AL +F M E + + P
Sbjct: 346 LDVIGKMKEKGVA---------PNVVSWTAIFSGCSKNGNFRNALKVFIKMQE--EGVGP 394
Query: 312 NYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI---KPLMVH---YGAMVDIYGRAGLL 365
N T +L ++ G + VHG K L+ A+VD+YG++G L
Sbjct: 395 NAATMSTLLKILGCLSLLHSG-------KEVHGFCLRKNLICDAYVATALVDMYGKSGDL 447
Query: 366 REAYEFIQSMPVNPDPIVWRTLL 388
+ A E + N W +L
Sbjct: 448 QSAIEIFWGIK-NKSLASWNCML 469
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 217/446 (48%), Gaps = 13/446 (2%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATP 72
+S++ C HQ+ I Y L+S + S ++ A K+
Sbjct: 295 VSVMGSCSCAAMGHQVHG-LAIKTGYEKYTLVSNAT-MTMYSSFEDFGAAHKVFESLEEK 352
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
++WN +I + + A+ V+++M GVKP++ TF LL A L + V
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQ 409
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
A +KFGL S + + N LI+ Y + +I A +F+ + +SWN++I+ N +
Sbjct: 410 ACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPF 469
Query: 193 DGVEYFLKMRGSGFE--PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+G+E F + S PD ++ +LS C L LG H V+ G +G A
Sbjct: 470 EGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA 529
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L++MY + G + + VF +M +++V++W+++I ++HG E A++ ++ M ++ +
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTM-QDEGKVI 588
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
P+ T+ VL ACSHAG+V+EG F M HG+ + H+ +VD+ GRAG L EA
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAES 648
Query: 371 F--IQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLY 428
I + VW L SAC+ AH +G V K L+ E V ++N+Y
Sbjct: 649 LVKISEKTIGSRVDVWWALFSACA---AHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIY 705
Query: 429 AEAGMWERAANVRRVMRDGGMKKMAG 454
A AGMW+ A RR + G K G
Sbjct: 706 AGAGMWKEAEETRRAINMIGAMKQRG 731
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 32/324 (9%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
WN +I G S ++ +FR+M + GV+ +K F +L C GS L GKQVH+ +
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHSLVI 216
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDE--MPERTPVSWNSVITACVENLWLRDG 194
K G V N LI Y C+ ++DA VF+E + R V++N VI + +
Sbjct: 217 KAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG-LAGFKRDES 275
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ F KM + P + + V ++ +C+ ++G VH + G + A + M
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTM 332
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y G A VFE +E+++++TW+ MI Q + A+S+++ M + ++P+
Sbjct: 333 YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM--HIIGVKPDEF 390
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG---------AMVDIYGRAGLL 365
T+ G L A S +++ + ++ ++ +G A++ Y + G +
Sbjct: 391 TF-GSLLATS------------LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQI 437
Query: 366 REAYEFIQSMPVNPDPIVWRTLLS 389
+A + + + + I W ++S
Sbjct: 438 EKA-DLLFERSLRKNLISWNAIIS 460
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 139/306 (45%), Gaps = 61/306 (19%)
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRC------KKILD------------------- 162
G QVH A++ GL +V N L++ Y R KK D
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 163 ------ARKVFDEMPERTPVS-WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVL 215
A +VFD+MPER V+ WN++IT C E+ + VE F +M G D+
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME--K 273
+LS C + G L G+ VH V+ G ++ + AL+ MY + A LVFE +
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 274 RNVLTWSAMILGLAQHGFA-EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM---- 328
R+ +T++ +I GLA GF +E+L +F M E ++RP +T++ V+ +CS A M
Sbjct: 255 RDQVTFNVVIDGLA--GFKRDESLLVFRKMLEA--SLRPTDLTFVSVMGSCSCAAMGHQV 310
Query: 329 ----VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVW 384
+ GY +Y M Y + D +G A + E+ E D + W
Sbjct: 311 HGLAIKTGYE-----KYTLVSNATMTMYSSFED-FGAAHKVFESLE-------EKDLVTW 357
Query: 385 RTLLSA 390
T++S+
Sbjct: 358 NTMISS 363
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 22/229 (9%)
Query: 192 RDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
R+ ++ F + R + PD+ S+ L ++ L G VHC + G++ +
Sbjct: 38 RNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNT 97
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+ +Y + G L + F+ +++ +V +W+ ++ + G E A +F+ M E R
Sbjct: 98 LLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE-----R 152
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYV------HGIKPL--MVHYGAMVDIYGRA 362
+ + ++ C +G + FREM + G + M YG++ +G+
Sbjct: 153 DDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL--DFGKQ 210
Query: 363 --GLLREAYEFIQSMPVNPDPIVW---RTLLSACSVHDAHDRTGIGDKV 406
L+ +A FI S VN ++ + ++ AC V + D + D+V
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD-VAVRDQV 258
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 212/433 (48%), Gaps = 51/433 (11%)
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
A+K A + +SWN L+ G+ S EA VF K+ E+ L K +
Sbjct: 158 AKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDM 217
Query: 122 GSA--LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
G+A L + + A N LI Y C+++ AR FD MP++ VSW
Sbjct: 218 GNACSLFSAMPLKSPAS----------WNILIGGYVNCREMKLARTYFDAMPQKNGVSWI 267
Query: 180 SVIT------------------------------AC-VENLWLRDGVEYFLKM--RGSGF 206
++I+ AC +N +D ++ F +M R S
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 207 EPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARL 266
+PDE ++ ++SA ++LG S G WV + G+ + L T+L+D+Y K G A
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFK 387
Query: 267 VFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHA 326
+F + K++ +++SAMI+G +G A EA SLF M E I PN VT+ G+L A SH+
Sbjct: 388 MFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK--KIPPNVVTFTGLLSAYSHS 445
Query: 327 GMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRT 386
G+V EGY+ F M+ H ++P HYG MVD+ GRAG L EAYE I+SMP+ P+ VW
Sbjct: 446 GLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGA 504
Query: 387 LLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRD 446
LL A + H+ G+ + +E G L +A +Y+ G W+ A VR +++
Sbjct: 505 LLLASGL---HNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKE 561
Query: 447 GGMKKMAGESCVD 459
+ K G S V+
Sbjct: 562 KKLCKTLGCSWVE 574
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 214/495 (43%), Gaps = 52/495 (10%)
Query: 15 LLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNL-THARKLVLHSATPS 73
L C ++Q Q+ AQ ++ + H +L + S+N+ T+ ++++
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
SW L+R + E + V+ M G+ P+ +L+ C + +GK +HA
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
A+K GL VYV L+ Y R I A+K FD++ E+ VSWNS++ +E+ L +
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS--------------------LGRWVH 233
F K+ E D S L++S+ A+ G + +G +V+
Sbjct: 189 ARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN 244
Query: 234 CQVVLRGMV----LSCQLGTALVDM---YGKSGALGYARLVFERMEKRNVLTWSAMILGL 286
C+ + + + G + + M Y K G + A +F M K++ L + AMI
Sbjct: 245 CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACY 304
Query: 287 AQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY---RYFREMEYVH 343
Q+G ++AL LF M E + I+P+ +T V+ A S G G Y E H
Sbjct: 305 TQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE----H 360
Query: 344 GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
GIK + +++D+Y + G +A++ ++ D + + ++ C ++ G+
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGIN------GMA 413
Query: 404 DKVRKELL-LVEPRRGGNLVIVANL---YAEAGMWERAANVRRVMRDGGMKKMAGES--C 457
+ ++E + N+V L Y+ +G+ + M+D ++ A
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIM 473
Query: 458 VDLGGSMIRFFAGYD 472
VD+ G R Y+
Sbjct: 474 VDMLGRAGRLEEAYE 488
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 235/469 (50%), Gaps = 18/469 (3%)
Query: 11 QCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCS-----LSPSKNLTHARKL 65
C+++ ++ ++ + I +HG V+VC+ S ++ A ++
Sbjct: 225 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRV 284
Query: 66 VLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSAL 125
+ + +SWN ++ GF + EA+ +F M + V+ +++T LL+ C
Sbjct: 285 FDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQP 344
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITAC 185
K +H ++ G +S+ ++LI+ Y C + DA V D M + VS +++I+
Sbjct: 345 LPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGL 404
Query: 186 VENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS- 244
+ + F MR + P+ +++ +L+AC+ L +W H + R + ++
Sbjct: 405 AHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND 461
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
+GT++VD Y K GA+ AR F+++ ++N+++W+ +I A +G ++AL+LF+ M +
Sbjct: 462 ISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQ 521
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM-EYVHGIKPLMVHYGAMVDIYGRAG 363
PN VTYL L AC+H G+V +G F+ M E H KP + HY +VD+ RAG
Sbjct: 522 K--GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRAG 577
Query: 364 LLREAYEFIQSMP--VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
+ A E I+++P V W +LS C + + I +V E+L +EP
Sbjct: 578 EIDTAVELIKNLPEDVKAGASAWGAILSGC--RNRFKKLIITSEVVAEVLELEPLCSSGY 635
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAG 470
++ ++ +A WE A +RR++++ ++ +AG S V G RF AG
Sbjct: 636 LLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAG 684
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 198/407 (48%), Gaps = 36/407 (8%)
Query: 8 NKNQCLSLLNLCRSI----DQLHQ--IQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTH 61
N + + +++ CRS+ +++H I++ F N+ L C + S +L+
Sbjct: 126 NTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSIL-------CMYADSDSLS- 177
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCA 120
ARKL + ISW+++IR + S P+ + +F++M E +P+ +T +LK C
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 121 VGSALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
V + G+ VH +++ G D +DV+V N+LI+ Y + + A +VFDE R VSWN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
S++ V N + +E F M E DE ++V +L C + +H ++ R
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G + ++L+D Y + A V + M ++V++ S MI GLA G ++EA+S+F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI---KPLMVHY---- 352
M + PN +T + +L ACS + R ++ HGI + L ++
Sbjct: 418 CHMRDT-----PNAITVISLLNACSVSA-------DLRTSKWAHGIAIRRSLAINDISVG 465
Query: 353 GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDR 399
++VD Y + G + A + + I W ++SA +++ D+
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQI-TEKNIISWTVIISAYAINGLPDK 511
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 179/404 (44%), Gaps = 54/404 (13%)
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
+SWN+++ G E +W F K+R G +PN T ++ C S +G+++H
Sbjct: 92 SVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACR--SLWFDGEKIHG 149
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
++ G V N+++ Y L ARK+FDEM ER +SW+ VI + V++
Sbjct: 150 YVIRSGFCGISSVQNSILCMYADSDS-LSARKLFDEMSERDVISWSVVIRSYVQSKEPVV 208
Query: 194 GVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTAL 251
G++ F +M + EPD ++ +L AC + + +GR VH + RG L+ + +L
Sbjct: 209 GLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSL 268
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+DMY K + A VF+ RN+++W++++ G + +EAL +F +M + + +
Sbjct: 269 IDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ--EAVEV 326
Query: 312 NYVTYLGVLCAC-----------------------------------SHAGMVDEGYRYF 336
+ VT + +L C + +VD+
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 337 REMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDA 396
M Y +V M+ AG EA M P+ I +LL+ACSV A
Sbjct: 387 DSMTYKD-----VVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVS-A 440
Query: 397 HDRTGI---GDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERA 437
RT G +R+ L + + G ++V + YA+ G E A
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIV---DAYAKCGAIEMA 481
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 24/242 (9%)
Query: 92 EAIWVFRKMRERGVKPNK-LTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNL 150
E + + +++ GV+ N FP + K CA S L + GN++
Sbjct: 27 EVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL-------------------FQGNSI 67
Query: 151 INFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDE 210
+FY +C + + FD M R VSWN ++ ++ + +G+ +F K+R GFEP+
Sbjct: 68 ADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNT 127
Query: 211 TSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFER 270
+++VL++ AC L + G +H V+ G + +++ MY S +L AR +F+
Sbjct: 128 STLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDE 184
Query: 271 MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVD 330
M +R+V++WS +I Q L LF+ M + P+ VT VL AC+ +D
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMV-HEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 331 EG 332
G
Sbjct: 244 VG 245
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 175/322 (54%), Gaps = 3/322 (0%)
Query: 74 PISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
+++N L +G+ +A V++ M+ GV P+ T +L+ CA S G V+
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 134 DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP-ERTPVSWNSVITACVENLWLR 192
+K G DS+ +V + LIN + +C + A +FD+ E++ VSWN ++ + +
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
+ V F +M+ F+P+ + V ++ A AEL L +G VH ++ G +G +LV
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K G + + F + + +++W+ M+ A HG A A+SLF M EN ++P+
Sbjct: 647 DMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENE--LKPD 704
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
V++L VL AC HAG+V+EG R F EM H I+ + HY MVD+ G+AGL EA E +
Sbjct: 705 SVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMM 764
Query: 373 QSMPVNPDPIVWRTLLSACSVH 394
+ M V VW LL++ +H
Sbjct: 765 RRMRVKTSVGVWGALLNSSRMH 786
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 192/395 (48%), Gaps = 15/395 (3%)
Query: 8 NKNQCLSLLNLCRSIDQLHQIQAQFHIHG-HYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
N L +L C++ L Q+ + G HN +L+ SL ++L+ R +
Sbjct: 4 NYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHN-----QLINAYSLFQRQDLS--RVIF 56
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLLKCCAVGSAL 125
P + WN +IRG+ + EA+ F M E+G+ P+K +F F LK CA
Sbjct: 57 DSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDF 116
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITAC 185
++G ++H + GL+SDVY+G L+ Y + + ++ AR+VFD+M + V+WN++++
Sbjct: 117 KKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGL 176
Query: 186 VENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSC 245
+N + F MR + D S+ ++ A ++L + R +H V+ +G + +
Sbjct: 177 AQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA- 235
Query: 246 QLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
+ L+DMY L A VFE + +++ +W M+ A +GF EE L LF++M N
Sbjct: 236 -FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM-RN 293
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+D +R N V L A ++ G + +G + G+ + +++ +Y + G L
Sbjct: 294 YD-VRMNKVAAASALQAAAYVGDLVKGIA-IHDYAVQQGLIGDVSVATSLMSMYSKCGEL 351
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRT 400
A + ++ + D + W ++++ HD
Sbjct: 352 EIAEQLFINIE-DRDVVSWSAMIASYEQAGQHDEA 385
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 2/213 (0%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
S +SWNI++ G+ EA+ FR+M+ +PN +TF +++ A SALR G VH
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVH 627
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
+ ++ G S VGN+L++ Y +C I + K F E+ + VSWN++++A +
Sbjct: 628 SSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLAS 687
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV-LSCQLGTAL 251
V FL M+ + +PD S + +LSAC G + G+ + ++ R + + +
Sbjct: 688 CAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACM 747
Query: 252 VDMYGKSGALGYARLVFERME-KRNVLTWSAMI 283
VD+ GK+G G A + RM K +V W A++
Sbjct: 748 VDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 157/355 (44%), Gaps = 26/355 (7%)
Query: 56 SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFL 115
+++L AR++ ++WN ++ G A + A+ +F MR V + ++ L
Sbjct: 148 ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNL 207
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
+ + + +H +K G G LI+ Y C + A VF+E+ +
Sbjct: 208 IPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDE 265
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
SW +++ A N + + +E F MR ++ + L A A +G L G +H
Sbjct: 266 SSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
V +G++ + T+L+ MY K G L A +F +E R+V++WSAMI Q G +EA
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEA 385
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH------GIKPLM 349
+SLF M H I+PN VT VL C+ G R + +H I+ +
Sbjct: 386 ISLFRDMMRIH--IKPNAVTLTSVLQGCA-------GVAASRLGKSIHCYAIKADIESEL 436
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGD 404
A++ +Y + G A + + +P+ D + + L A T IGD
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL--------AQGYTQIGD 482
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 145/319 (45%), Gaps = 3/319 (0%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
SW ++ +A + E + +F MR V+ NK+ L+ A L +G +H A
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
V+ GL DV V +L++ Y +C ++ A ++F + +R VSW+++I + + + +
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
F M +P+ ++ +L CA + LG+ +HC + + + TA++ MY
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMY 446
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
K G A FER+ ++ + ++A+ G Q G A +A +++ M + + P+ T
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH--GVCPDSRT 504
Query: 316 YLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
+G+L C+ G + ++ HG A+++++ + L A
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQI-IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKC 563
Query: 376 PVNPDPIVWRTLLSACSVH 394
+ W +++ +H
Sbjct: 564 GFEKSTVSWNIMMNGYLLH 582
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 204/399 (51%), Gaps = 22/399 (5%)
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSAL--- 125
S + ++W +I+G+ +A +F +M PF LK S +
Sbjct: 139 SVCRNTVTWIEMIKGYGKRIEIEKARELFERM------------PFELKNVKAWSVMLGV 186
Query: 126 REGKQVHADAVKFGLD---SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI 182
+ DA KF D + +V + +++ Y R + +AR +F + R V WN++I
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
+N + D ++ F M+G G+EPD ++ +LSACA+ G L +GR VH + RG+
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
L+ + AL+DMY K G L A VFE + R+V ++MI LA HG +EAL +F M
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
E+ D ++P+ +T++ VL AC H G + EG + F EM+ +KP + H+G ++ + GR+
Sbjct: 367 -ESLD-LKPDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRS 423
Query: 363 GLLREAYEFIQSMPVNPDPIVWRTLLSACSVH-DAHDRTGIGDKVRKELLLVEPRRGGNL 421
G L+EAY ++ M V P+ V LL AC VH D + + + +L
Sbjct: 424 GKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHL 483
Query: 422 VIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDL 460
++NLYA W+ A +R M G++K G S + L
Sbjct: 484 ASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 167/327 (51%), Gaps = 35/327 (10%)
Query: 80 LIRGFATSDSPIEAIWVFRKMRERGVK-PNKLTFPFLLKCCA-VGSALREGKQVHADAVK 137
LI+ + SPI+A+ ++ +R RGV P + P +L+ CA V + GK +H++++K
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWV--PLILRACACVVPRVVLGKLLHSESIK 74
Query: 138 FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN--------- 188
FG+ SDV VG++LI+ YG+C ++ ARKVFDEMPER +WN++I + N
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 189 ----LWLRDGVEYFLKMRGSGFEPD-ETSMVLMLSACAELGYLS-----LGRWVHCQVV- 237
R+ V + ++G G + E + L EL + LG +V+ + +
Sbjct: 135 FEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKME 194
Query: 238 -LRGMVLSCQLGTALV-----DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
R A V Y + G + AR +F R+ R+++ W+ +I G AQ+G+
Sbjct: 195 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 254
Query: 292 AEEAL-SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
+++A+ + F M E ++ P+ VT +L AC+ +G +D G R + GI+
Sbjct: 255 SDDAIDAFFNMQGEGYE---PDAVTVSSILSACAQSGRLDVG-REVHSLINHRGIELNQF 310
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPV 377
A++D+Y + G L A +S+ V
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISV 337
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 199 LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKS 258
++ RG F P ++L AC + + LG+ +H + + G+ +G++L+ MYGK
Sbjct: 37 IRRRGVYF-PGWVPLILRACACV-VPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKC 94
Query: 259 GALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLG 318
G + AR VF+ M +RNV TW+AMI G +G A A LFE +S + N VT++
Sbjct: 95 GCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS-----VCRNTVTWIE 149
Query: 319 VLCACSHAGMVDEGYRYFREMEY-VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPV 377
++ +++ F M + + +K + M+ +Y + +A +F + +P
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFELKNVKA----WSVMLGVYVNNRKMEDARKFFEDIP- 204
Query: 378 NPDPIVWRTLLSA-CSVHDAHDRTGI 402
+ VW ++S + D H+ I
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAI 230
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 222/482 (46%), Gaps = 68/482 (14%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG-VKPNKLTFPFLLK 117
+ AR L + I+W +I G+ + + +F +MR+ G VK N T + K
Sbjct: 224 IVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFK 283
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVG------------------------------ 147
C REG Q+H + L+ D+++G
Sbjct: 284 ACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVS 343
Query: 148 -NNLINFYGRCKKILDARKVFDEMP-------------------------------ERTP 175
N+LI + K+I +A ++F++MP E+
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDN 403
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
++W ++I+A V N + + + +F KM P+ + +LSA A L L G +H +
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
VV +V + +LV MY K G A +F + + N+++++ MI G + +GF ++A
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKA 523
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
L LF M+ + PN VT+L +L AC H G VD G++YF+ M+ + I+P HY M
Sbjct: 524 LKLFSMLESSGK--EPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACM 581
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
VD+ GR+GLL +A I +MP P VW +LLSA H R + + K+L+ +EP
Sbjct: 582 VDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA---SKTHLRVDLAELAAKKLIELEP 638
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRP 475
V+++ LY+ G + + + +KK G S + L G + F AG +S+
Sbjct: 639 DSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQL 698
Query: 476 DL 477
+L
Sbjct: 699 NL 700
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 23/340 (6%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
+L A +L + +S+ +I GF + EA +++ E VK +L
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA---ETPVKFRDSVASNVL- 183
Query: 118 CCAVGSALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
+ LR GK A V G+ +V +++++ Y + +I+DAR +FD M ER +
Sbjct: 184 ---LSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+W ++I + + DG FL+MR G + + ++ +M AC + G +H
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
V + LG +L+ MY K G +G A+ VF M+ ++ ++W+++I GL Q EA
Sbjct: 301 VSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEA 360
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
LFE M + V++ ++ S G + + F M I + AM
Sbjct: 361 YELFEKMPGK------DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAM 409
Query: 356 VDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSACS 392
+ + G EA + M V P+ + ++LSA +
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 47/276 (17%)
Query: 150 LINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN-------------LWLRDGVE 196
+I+ Y K+ A +VFDEMP R S+N++ITA ++N + ++ V
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 197 YFLKMRG---------SGFEPDETSMVLMLSACAEL---GYLSLGRWVHCQVVLRGM--- 241
Y + G + F ET + S + + GYL G+W V +GM
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK 206
Query: 242 -VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
V+SC +++V Y K G + AR +F+RM +RNV+TW+AMI G + GF E+ LF
Sbjct: 207 EVVSC---SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI---KPLMVHY---GA 354
M + D ++ N T + AC + +RE +HG+ PL +
Sbjct: 264 RMRQEGD-VKVNSNTLAVMFKAC-------RDFVRYREGSQIHGLVSRMPLEFDLFLGNS 315
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
++ +Y + G + EA M N D + W +L++
Sbjct: 316 LMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLITG 350
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 191/375 (50%), Gaps = 36/375 (9%)
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
+ARK+ + +N +I G+A + EA+ + + M+ G+KP+ +T+ L+
Sbjct: 170 NARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGF- 228
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
S +R ++V +IL+ + P+ VSW S
Sbjct: 229 --SHMRNEEKV--------------------------SEILELMCLDGYKPD--VVSWTS 258
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+I+ V N + F +M G P+ +++ +L AC L Y+ G+ +H V+ G
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
+ + +AL+DMYGK G + A ++F + K+ +T+++MI A HG A++A+ LF+
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M + + +++T+ +L ACSHAG+ D G F M+ + I P + HY MVD+ G
Sbjct: 379 QMEATGEKL--DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG 436
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGN 420
RAG L EAYE I++M + PD VW LL+AC H + I K EL EP GN
Sbjct: 437 RAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAEL---EPENSGN 493
Query: 421 LVIVANLYAEAGMWE 435
+++ +LYA AG WE
Sbjct: 494 GLLLTSLYANAGSWE 508
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 6/269 (2%)
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVE 187
G+ +HA V G+ + L+ FY C K+LDARKVFDEMP+R +I AC
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
N + ++ +++F +M G + D + +L A L G+ +HC V+ +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
++L+DMY K G +G AR VF + +++++ ++AMI G A + A+EAL+L + M
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM--KLL 212
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
I+P+ +T+ ++ SH +E E+ + G KP +V + +++ +
Sbjct: 213 GIKPDVITWNALISGFSHM-RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 368 AYEFIQSMPVN---PDPIVWRTLLSACSV 393
A++ + M + P+ TLL AC+
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTT 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 35/308 (11%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
E++ FR+M + G+K + P LLK GK +H +KF +SD ++ ++LI
Sbjct: 100 ESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLI 159
Query: 152 NFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
+ Y + ++ +ARKVF ++ E+ V +N++I+ N + + M+ G +PD
Sbjct: 160 DMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVI 219
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
+ ++S G+ + +L M L GY
Sbjct: 220 TWNALIS-----GFSHMRNEEKVSEILELMCLD-----------------GY-------- 249
Query: 272 EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDE 331
K +V++W+++I GL + E+A F+ M + + PN T + +L AC+ +
Sbjct: 250 -KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH--GLYPNSATIITLLPACTTLAYMKH 306
Query: 332 GYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSAC 391
G + V G++ A++D+YG+ G + EA + P + + +++
Sbjct: 307 G-KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP-KKTTVTFNSMIFCY 364
Query: 392 SVHDAHDR 399
+ H D+
Sbjct: 365 ANHGLADK 372
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 220/417 (52%), Gaps = 18/417 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SW ++ G A + EA +F M ER + +++ ++ A + + E Q+
Sbjct: 203 VSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQL--- 255
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ + D N +I + R +++ A +FD MPE+ +SW ++IT VEN +
Sbjct: 256 -FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 195 VEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT-ALV 252
+ F KM R +P+ + V +LSAC++L L G+ +H Q++ + + ++ T AL+
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALL 373
Query: 253 DMYGKSGALGYARLVFER--MEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+MY KSG L AR +F+ + +R++++W++MI A HG +EA+ ++ M ++ +
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH--GFK 431
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
P+ VTYL +L ACSHAG+V++G +F+++ + HY +VD+ GRAG L++
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTN 491
Query: 371 FIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAE 430
FI + +LSAC+VH+ I +V K++L G V+++N+YA
Sbjct: 492 FINCDDARLSRSFYGAILSACNVHN---EVSIAKEVVKKVLETGSDDAGTYVLMSNIYAA 548
Query: 431 AGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
G E AA +R M++ G+KK G S V +G F G S P + +L L
Sbjct: 549 NGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 36/316 (11%)
Query: 157 CK--KILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMV 214
CK KI +ARK+FD +PER V+W VIT ++ +R+ E F ++ + +
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWT 113
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR 274
M+S LS+ + ++ R +V ++D Y +SG + A +F+ M +R
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 275 NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR 334
N+++W++M+ L Q G +EA++LFE M R + V++ ++ + G VDE R
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMP------RRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 335 YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
F M + ++ + AM+ Y + + EA + Q MP D W T+++ +
Sbjct: 224 LFDCMPERN-----IISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITGFIRN 277
Query: 395 DAHDRT-GIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANV-RRVMRDGGMKKM 452
++ G+ D++ ++ ++ + + Y E E A NV +++RDG +K
Sbjct: 278 REMNKACGLFDRMPEKNVI-------SWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 453 AG------ESCVDLGG 462
G +C DL G
Sbjct: 331 VGTYVSILSACSDLAG 346
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 186/440 (42%), Gaps = 95/440 (21%)
Query: 7 SNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLV 66
S+ ++ + L NL RSI + ++ + +L+ EL V ++ ARKL
Sbjct: 22 SDNDRSVQLFNLVRSI---YSSSSRPRVP---QPEWLIGELCKVGKIA------EARKLF 69
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
++W +I G+ EA +F ++ R N +T+ A+ S
Sbjct: 70 DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTW------TAMVSGYL 120
Query: 127 EGKQVHADAVKFGL--DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
KQ+ + F + +V N +I+ Y + +I A ++FDEMPER VSWNS++ A
Sbjct: 121 RSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA 180
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
V+ + + + F +M P R V+S
Sbjct: 181 LVQRGRIDEAMNLFERM------P------------------------------RRDVVS 204
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
TA+VD K+G + AR +F+ M +RN+++W+AMI G AQ+ +EA LF++M E
Sbjct: 205 W---TAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM-----VHYGAMVDIY 359
++ ++ ++ G+ REM G+ M + + M+ Y
Sbjct: 262 R------DFASWNTMIT----------GFIRNREMNKACGLFDRMPEKNVISWTTMITGY 305
Query: 360 GRAGLLREAYEFIQSM----PVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
EA M V P+ + ++LSACS D G+ + + L+ +
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS-----DLAGLVEGQQIHQLISKS 360
Query: 416 RRGGNLVIVA---NLYAEAG 432
N ++ + N+Y+++G
Sbjct: 361 VHQKNEIVTSALLNMYSKSG 380
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 205/395 (51%), Gaps = 5/395 (1%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN LI + S + A+ F MRE ++P++ T ++ C+ L +GKQ A
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+K G S+ V I+ + +C ++ D+ K+F E+ + V NS+I + + D
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDA 320
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ F+ PD+ + +LS+ + L G VH V+ G L + T+L++M
Sbjct: 321 LRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEM 379
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
Y K+G++ A VF + + ++++ W+ +I+GLA++ A E+L++F + N +++P+ V
Sbjct: 380 YFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ-SLKPDRV 438
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
T +G+L AC +AG V+EG + F ME HG+ P HY ++++ R G++ EA +
Sbjct: 439 TLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADK 498
Query: 375 MPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
+P P +W +L C+ D D T + + V K +L EP+ +++ +Y W
Sbjct: 499 IPFEPSSHIWEPIL--CASLDLGD-TRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRW 555
Query: 435 ERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFA 469
E + +R M + +K G S + + S+ F A
Sbjct: 556 ENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 133/259 (51%), Gaps = 7/259 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN +I G + I VF M+ ++P + TF L ++ + +R G+Q+H +
Sbjct: 102 VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL---ASLVTCVRHGEQIHGN 158
Query: 135 AVKFGLDS-DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
A+ G+ ++ V N++++ Y R A VF M +R VSWN +I +C ++
Sbjct: 159 AICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEV 218
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
++ F MR +PDE ++ +++S C++L LS G+ + G + + + A +D
Sbjct: 219 ALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGID 278
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
M+ K L + +F +EK + + ++MI + H E+AL LF + ++RP+
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQ--SVRPDK 336
Query: 314 VTYLGVLCACSHAGMVDEG 332
T+ VL + +A M+D G
Sbjct: 337 FTFSSVLSSM-NAVMLDHG 354
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 138/321 (42%), Gaps = 41/321 (12%)
Query: 107 PNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKV 166
P+ L F L+ + + K VHA ++ G Y GN + Y + +++A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 167 FDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELG-- 224
FD++P++ ++WN + +N +L + ++ F +M E D S M+S G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMP----ERDVVSWNTMISGLVSCGFH 117
Query: 225 ------YLSLGRW------------------------VHCQVVLRGMV-LSCQLGTALVD 253
+ + RW +H + G+ + + +++D
Sbjct: 118 EYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMD 177
Query: 254 MYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
MY + G YA VF ME R+V++W+ +IL + G E AL F +M E I+P+
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME--IQPDE 235
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
T V+ CS + +G + + G + GA +D++ + L ++ + +
Sbjct: 236 YTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 374 SMPVNPDPIVWRTLLSACSVH 394
+ D ++ +++ + S H
Sbjct: 295 ELE-KWDSVLCNSMIGSYSWH 314
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 204/428 (47%), Gaps = 20/428 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK----- 129
++WN +I F + +AI VF +M GV ++ T + S L +
Sbjct: 227 VTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCC 286
Query: 130 -QVHADAVKFGLDSDVYVGNNLINFYGR-CKKILDARKVFDEMPE-RTPVSWNSVITACV 186
Q+H+ VK GL + V LI Y + D K+F EM R V+WN +ITA
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
R + F ++R PD + +L ACA L +H QV+ G +
Sbjct: 347 VYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L +L+ Y K G+L VF+ M+ R+V++W++M+ + HG + L +F+ M
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---- 461
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+I P+ T++ +L ACSHAG V+EG R FR M P + HY ++D+ RA
Sbjct: 462 -DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFA 520
Query: 367 EAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTG--IGDKVRKELLLVEPRRGGNLVIV 424
EA E I+ MP++PD +VW LL +C H + R G DK+++ LVEP + + +
Sbjct: 521 EAEEVIKQMPMDPDAVVWIALLGSCRKH-GNTRLGKLAADKLKE---LVEPTNSMSYIQM 576
Query: 425 ANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLL 484
+N+Y G + A + M ++K S ++G + F +G RPD VY L
Sbjct: 577 SNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL 636
Query: 485 DGLNLHLK 492
L LK
Sbjct: 637 KRLISWLK 644
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 178/427 (41%), Gaps = 63/427 (14%)
Query: 12 CLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSAT 71
C NL I+ H + + H + + N L + L+ + + N+ +AR++
Sbjct: 69 CAEQRNLLDGINLHHHMLS--HPYCYSQNVILANFLINM--YAKCGNILYARQVFDTMPE 124
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
+ +SW LI G+ + + E +F M PN+ T +L C GKQV
Sbjct: 125 RNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGKQV 179
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRC---KKILDARKVFDEMPERTPVSWNSVITACVEN 188
H A+K GL +YV N +I+ YGRC +A VF+ + + V+WNS+I A
Sbjct: 180 HGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCC 239
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR------WVHCQVVLRGMV 242
+ + F++M G D +++ + S+ + L +H V G+V
Sbjct: 240 NLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLV 299
Query: 243 LSCQLGTALVDMYGK--SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
++ TAL+ +Y + +L E R+++ W+ +I A + E A+ LF
Sbjct: 300 TQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFG 358
Query: 301 MMSENHDNIRPNYVTYLGVLCACS-----------HAGMVDEGY---------------- 333
+ + + + P++ T+ VL AC+ HA ++ G+
Sbjct: 359 QLRQ--EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAK 416
Query: 334 --------RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWR 385
R F +M+ +V + +M+ Y G + Q M +NPD +
Sbjct: 417 CGSLDLCMRVFDDMD-----SRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFI 471
Query: 386 TLLSACS 392
LLSACS
Sbjct: 472 ALLSACS 478
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVK--FGLDSDVYVGNNLINFYGRCKKILDARK 165
++ + L + CA L +G +H + + +V + N LIN Y +C IL AR+
Sbjct: 58 SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQ 117
Query: 166 VFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGY 225
VFD MPER VSW ++IT V+ ++G F M F P+E ++ +L++C
Sbjct: 118 VFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR---- 172
Query: 226 LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK--SGALGY-ARLVFERMEKRNVLTWSAM 282
G+ VH + G+ S + A++ MYG+ GA Y A VFE ++ +N++TW++M
Sbjct: 173 YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 283 ILGLAQHGFAEEALSLFEMMSEN------------------HDNIRPNYVTYLGVLCACS 324
I ++A+ +F M + ++ PN V+ C
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSK---CCLQL 289
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVW 384
H+ V G E+ L+ Y M++ Y + Y+ M D + W
Sbjct: 290 HSLTVKSGLVTQTEVA-----TALIKVYSEMLEDY------TDCYKLFMEMSHCRDIVAW 338
Query: 385 RTLLSACSVHDAHDRTGIGDKVRKELL 411
+++A +V+D + ++R+E L
Sbjct: 339 NGIITAFAVYDPERAIHLFGQLRQEKL 365
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 202/418 (48%), Gaps = 10/418 (2%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
I++N L+ GF + ++A+ +F M +RGV+ + + C + S + +Q+H
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGF 442
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS--WNSVITACVENLWLR 192
+KFG + + L++ RC+++ DA ++FD+ P S S+I N
Sbjct: 443 CIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPD 502
Query: 193 DGVEYFLK-MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
V F + + DE S+ L+L+ C LG+ +G +HC + G LG +L
Sbjct: 503 KAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSL 562
Query: 252 VDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRP 311
+ MY K A +F M + +V++W+++I +EAL+L+ M+E I+P
Sbjct: 563 ISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK--EIKP 620
Query: 312 NYVTYLGVLCAC--SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
+ +T V+ A + + + F M+ ++ I+P HY A V + G GLL EA
Sbjct: 621 DIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAE 680
Query: 370 EFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYA 429
+ I SMPV P+ V R LL +C + H T + +V K +L +P ++ +N+Y+
Sbjct: 681 DTINSMPVQPEVSVLRALLDSCRI---HSNTSVAKRVAKLILSTKPETPSEYILKSNIYS 737
Query: 430 EAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGL 487
+G W R+ +R MR+ G +K +S + + F A S P +Y L+ L
Sbjct: 738 ASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG-VKPNKLTFPFLLKCCAVGSALREG 128
++P+ +S+ LI GF+ + IEA+ VF +MR+ G V+PN+ TF +L C S G
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGR-----CKKILDARKVFDEMPERTPVSWNSVIT 183
Q+H VK G + V+V N+L++ Y + C +L K+FDE+P+R SWN+V++
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWNTVVS 257
Query: 184 ACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
+ V+ + F +M R GF D ++ +LS+C + L GR +H + + G++
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
+ AL+ Y K + ++E M ++ +T++ MI G + A+ +F +
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
+E N +TY ++ G + + F +M
Sbjct: 378 TEK------NTITYNALMAGFCRNGHGLKALKLFTDM 408
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 218/430 (50%), Gaps = 54/430 (12%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRE--------RGVKP-NKLTFPFLLKCCAVG--SAL 125
+N L+R ++ ++P+ A +++ +++ + + P + T+ FLLK + +L
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITAC 185
G +H +K G +S VYV L+ Y ++DA KVFDEMPER PV+WN +IT
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITG- 198
Query: 186 VENL--------------------WL------------RDGVEYFLKMRG-SGFEPDETS 212
+ NL W ++ + F +M +P+E +
Sbjct: 199 LTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEIT 258
Query: 213 MVLMLSACAELGYLSLGRWVHCQVVLRGMV-LSCQLGTALVDMYGKSGALGYARLVFERM 271
++ +L A LG L + VH V RG V ++ +L+D Y K G + A F +
Sbjct: 259 ILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEI 318
Query: 272 E--KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMV 329
++N+++W+ MI A HG +EA+S+F+ M ++PN VT + VL ACSH G+
Sbjct: 319 PNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERL--GLKPNRVTMISVLNACSHGGLA 376
Query: 330 DEGY-RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+E + +F M + I P + HYG +VD+ R G L EA + +P+ +VWR LL
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 389 SACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGG 448
ACSV+D + + ++V ++L+ +E GG+ V+++N++ G + A R+ M G
Sbjct: 437 GACSVYDDAE---LAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRG 493
Query: 449 MKKMAGESCV 458
+ K+ G S V
Sbjct: 494 VAKLPGHSQV 503
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 11/284 (3%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRE-RGVKPNKLTFPFLLKCCAVGSALREGKQVHA 133
+SW +I G+A D P EAI +F +M +KPN++T +L L+ VHA
Sbjct: 221 VSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHA 280
Query: 134 DAVKFG-LDSDVYVGNNLINFYGRCKKILDARKVFDEMP--ERTPVSWNSVITACVENLW 190
K G + D+ V N+LI+ Y +C I A K F E+P + VSW ++I+A +
Sbjct: 281 YVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGM 340
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAE--LGYLSLGRWVHCQVVLRGMVLSCQLG 248
++ V F M G +P+ +M+ +L+AC+ L + + V + +
Sbjct: 341 GKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHY 400
Query: 249 TALVDMYGKSGALGYA-RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
LVDM + G L A ++ E + + W ++ + + AE A + + E
Sbjct: 401 GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELER 460
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
+ +YV + C G + R+ ++M+ V G+ L H
Sbjct: 461 SHGGDYVLMSNIFCG---TGRFLDAQRFRKQMD-VRGVAKLPGH 500
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 185/344 (53%), Gaps = 15/344 (4%)
Query: 148 NNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
++I+ Y + A +F ++ ++ V+W +I+ V+N + M G +
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ-----LGTALVDMYGKSGALG 262
P ++ ++LS+ L G+ +HC + +C L +LV MY K GA+
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVI---AKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
A +F +M +++ ++W++MI+GL+ HG A++AL+LF+ M ++ +PN VT+LGVL A
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK--KPNSVTFLGVLSA 578
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPI 382
CSH+G++ G F+ M+ + I+P + HY +M+D+ GRAG L+EA EFI ++P PD
Sbjct: 579 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 638
Query: 383 VWRTLLSACSVH-DAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVR 441
V+ LL C ++ D GI ++ LL ++P V + N+YA G + +R
Sbjct: 639 VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMR 698
Query: 442 RVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPD----LIPVY 481
+ M G+KK G S V + G F +G S + ++P++
Sbjct: 699 KEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPIF 742
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
++W ++I G ++ EA + M G+KP T+ LL S L +GK +H
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 135 AVKFG--LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
K D D+ + N+L++ Y +C I DA ++F +M ++ VSWNS+I +
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLAD 551
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM--VLSCQLG-- 248
+ F +M SG +P+ + + +LSAC+ G ++ G + + M S Q G
Sbjct: 552 KALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG-----LELFKAMKETYSIQPGID 606
Query: 249 --TALVDMYGKSGALGYAR 265
+++D+ G++G L A
Sbjct: 607 HYISMIDLLGRAGKLKEAE 625
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 161/383 (42%), Gaps = 34/383 (8%)
Query: 4 RSLSNKNQC--LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTH 61
R+L K C LS L+L SI + +G Y + E + + LS L H
Sbjct: 2 RALCVKKVCGFLSKLSLRSSISCRRYYGDKIPNYGSYRRGFSNEEALILRRLSEG-GLVH 60
Query: 62 ARKLVLHSATPSPIS----WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
AR L+ I+ W L+ +A + EA +F M ER + +K
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
C + A +++ + V + + + GR + DA ++FDEMPER VS
Sbjct: 121 CRRMNEAWTLFREMPKNVVSWTVMLTALCDD------GRSE---DAVELFDEMPERNVVS 171
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
WN+++T + N + + F M D S M+ E + + + +
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ +V T++V Y + G + A +F M +RN+++W+AMI G A + EAL
Sbjct: 228 EKNVVT----WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALM 283
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIK---PLMVHYG- 353
LF M ++ D + PN T + + AC G+ +R E + I + H G
Sbjct: 284 LFLEMKKDVDAVSPNGETLISLAYACGGLGV---EFRRLGEQLHAQVISNGWETVDHDGR 340
Query: 354 ---AMVDIYGRAGLLREAYEFIQ 373
++V +Y +GL+ A +
Sbjct: 341 LAKSLVHMYASSGLIASAQSLLN 363
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 30/335 (8%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+SWN L+ G + +A VF M R V +++ ++K + E K + D
Sbjct: 170 VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFGD 225
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
+ +V +++ Y R + +A ++F EMPER VSW ++I+ N R+
Sbjct: 226 MS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 195 VEYFLKMRGS--GFEPDETSMVLMLSACAELG--YLSLGRWVHCQVVLRGMVL---SCQL 247
+ FL+M+ P+ +++ + AC LG + LG +H QV+ G +L
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+LV MY SG + A+ + E ++ + + +I ++G E A +LFE + HD
Sbjct: 342 AKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHD 399
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
V++ ++ AG V + F+++ G V + M+ + L E
Sbjct: 400 K-----VSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG-----VTWTVMISGLVQNELFAE 449
Query: 368 AYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDR 399
A + M + P + LLS+ D+
Sbjct: 450 AASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 57/271 (21%)
Query: 125 LREGKQVHA----DAV-KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWN 179
L EG VHA D + + G + V +L++ Y + + +AR +F+ MPER V+ N
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+++T V+ + + F +M + S +ML+A + G + ++ R
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPER 167
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
+V L T L+ ++G + A+ VF+ M R+V++W+AMI G ++ EEA LF
Sbjct: 168 NVVSWNTLVTGLI----RNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLF 223
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
MSE + +V + +MV Y
Sbjct: 224 GDMSEKN------------------------------------------VVTWTSMVYGY 241
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
R G +REAY MP + + W ++S
Sbjct: 242 CRYGDVREAYRLFCEMP-ERNIVSWTAMISG 271
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 202/423 (47%), Gaps = 45/423 (10%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRE-RGVKPNKLTFPFLLKCCAVGSALREGKQV 131
S +++N I G + VF MR+ +PN +TF + CA L+ G+Q+
Sbjct: 194 SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE-RTPVSWNSVITACVENLW 190
H +K + VG LI+ Y +C+ A VF E+ + R +SWNSVI+ + N
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 191 LRDGVEYFLKMRGSGFEPDETS-----------------------------------MVL 215
VE F K+ G +PD + +
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR- 274
+LSAC+++ L G+ +H V+ + T+L+DMY K G +AR +F+R E +
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 275 -NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
+ + W+ MI G +HG E A+ +FE++ E + + P+ T+ VL ACSH G V++G
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE--EKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSV 393
+ FR M+ +G KP H G M+D+ GR+G LREA E I M + +LL +C
Sbjct: 492 QIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCR- 549
Query: 394 HDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMA 453
H +G++ +L +EP VI++++YA WE ++R+V+ + K+
Sbjct: 550 --QHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLP 607
Query: 454 GES 456
G S
Sbjct: 608 GLS 610
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 150/295 (50%), Gaps = 11/295 (3%)
Query: 107 PNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKV 166
PNK TFP LLK CA + +G+ +HA VK G DV+ L++ Y + K++ DA KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 167 FDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL 226
DEMPER S N+ ++ +EN + RD F R SG + ++ +L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 227 SLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGL 286
G +HC + G + +GT+LV MY + G A +FE++ ++V+T++A I GL
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 287 AQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIK 346
++G S+F +M + PN VT++ + AC A +++ +Y R++ + K
Sbjct: 206 MENGVMNLVPSVFNLM-RKFSSEEPNDVTFVNAITAC--ASLLN--LQYGRQLHGLVMKK 260
Query: 347 PLMVHY---GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHD 398
A++D+Y + + AY + + I W +++S ++ H+
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 217/480 (45%), Gaps = 51/480 (10%)
Query: 8 NKNQCLSLLNLCRSIDQLHQ---IQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARK 64
NK LL C + + Q + AQ G + + + + LV + K +T A K
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSM--YMKVKQVTDALK 87
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
++ S N + G + +A +F R G N +T +L C
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---D 144
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
+ G Q+H A+K G + +VYVG +L++ Y RC + + A ++F+++P ++ V++N+ I+
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 185 CVENLWLRDGVEYFLKMRG-SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
+EN + F MR S EP++ + V ++ACA L L GR +H V+ +
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 244 SCQLGTALVDMYGKSGALGYARLVF-ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
+GTAL+DMY K A +VF E + RN+++W+++I G+ +G E A+ LFE +
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM----------------------- 339
+ + ++P+ T+ ++ S G V E +++F M
Sbjct: 325 --DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 340 -----EYVHG--IKPL----MVHYGAMVDIYGRAGLLREAYEFIQSMPVNP-DPIVWRTL 387
+ +HG IK + +++D+Y + GL A P DP+ W +
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM 442
Query: 388 LSACSVH-DAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRD 446
+S H + I + +R+E VEP V + + G E+ + + R+M++
Sbjct: 443 ISGYGKHGECESAIEIFELLREE--KVEPSL-ATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
KL P +WN LI GF+ IEA F +M + P+ LL C+
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDI 381
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD--EMPERTPVSWNS 180
L+ GK++H +K + D++V +LI+ Y +C AR++FD E + PV WN
Sbjct: 382 WTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNV 441
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR- 239
+I+ ++ +E F +R EP + +LSAC+ G + G + +
Sbjct: 442 MISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEY 501
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH---GFAEE-A 295
G S + ++D+ G+SG L A+ V ++M + + +S+++ QH EE A
Sbjct: 502 GYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAA 561
Query: 296 LSLFEMMSEN 305
+ L E+ EN
Sbjct: 562 MKLAELEPEN 571
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 187/381 (49%), Gaps = 47/381 (12%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
NL +R + + + WN L+ G+A D PI + +F +M + G +P + TF LK
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDAR------------- 164
C V E +Q+H+ V+ G + + YV ++L+ Y + + + DA
Sbjct: 425 SCCV----TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 165 -------------------KVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSG 205
K+ + + VSWN I AC + + + +E F M S
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ---LGTALVDMYGKSGALG 262
PD+ + V +LS C++L L+LG +H ++ SC + L+DMYGK G++
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIH--GLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 263 YARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF-EMMSENHDNIRPNYVTYLGVLC 321
VFE ++N++TW+A+I L HG+ +EAL F E +S +P+ V+++ +L
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG---FKPDRVSFISILT 655
Query: 322 ACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDP 381
AC H GMV EG F++M+ +G++P M HY VD+ R G L+EA I+ MP D
Sbjct: 656 ACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADA 714
Query: 382 IVWRTLLSACSVHDAHDRTGI 402
VWRT L C+ R +
Sbjct: 715 PVWRTFLDGCNRFAEEQRNTL 735
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 201/404 (49%), Gaps = 27/404 (6%)
Query: 6 LSNKN-QCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSEL---VYVCS--LSPSKNL 59
L+N N + +SLLN+CR + +A H + L S L VYVC+ +S + L
Sbjct: 8 LANHNDRVVSLLNVCRKAPSFARTKAL-----HALSITLCSVLLQPVYVCNNIISLYEKL 62
Query: 60 ---THARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
+ A K+ + +S+N +I+G++ +A VF +MR G PN+ T LL
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL 122
Query: 117 KCCAVGSALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
C ++ +R G Q+H ++K+GL +D +VG L+ YGR + A +VF++MP ++
Sbjct: 123 SCASLD--VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+WN +++ +L++ + +F ++ G E+S + +L + + L + + +HC
Sbjct: 181 ETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+G+ + +L+ YGK G A +F+ ++++W+A+I A+ +A
Sbjct: 241 ATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKA 300
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
L LF M E+ PN TY+ VL S ++ G R M +G + +V A+
Sbjct: 301 LKLFVSMPEH--GFSPNQGTYVSVLGVSSLVQLLSCG-RQIHGMLIKNGCETGIVLGNAL 357
Query: 356 VDIYGRAGLLREA---YEFIQSMPVNPDPIVWRTLLSACSVHDA 396
+D Y + G L ++ +++I+ + + + W LLS + D
Sbjct: 358 IDFYAKCGNLEDSRLCFDYIR----DKNIVCWNALLSGYANKDG 397
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 51/361 (14%)
Query: 76 SWNILI-----RGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+WN ++ RGF E ++ FR++ G + +F +LK + L KQ
Sbjct: 182 TWNHMMSLLGHRGFLK-----ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQ 236
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+H A K GLD ++ V N+LI+ YG+C A ++F + VSWN++I A ++
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
++ F+ M GF P++ + V +L + + LS GR +H ++ G LG A
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
L+D Y K G L +RL F+ + +N++ W+A++ G A LSLF M + R
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQM--GFR 413
Query: 311 PNYVTYLGVLCACS-------HAGMVDEGYRYFREMEYVHGIKPLMVHYGA--------- 354
P T+ L +C H+ +V GY + +YV + LM Y
Sbjct: 414 PTEYTFSTALKSCCVTELQQLHSVIVRMGY---EDNDYV--LSSLMRSYAKNQLMNDALL 468
Query: 355 ----------------MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHD 398
+ IY R G E+ + I ++ PD + W ++ACS D H+
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRSDYHE 527
Query: 399 R 399
Sbjct: 528 E 528
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 197/436 (45%), Gaps = 64/436 (14%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
N A ++ + + +SWN +I A S++P++A+ +F M E G PN+ T+ +L
Sbjct: 265 NTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLG 324
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
++ L G+Q+H +K G ++ + +GN LI+FY +C + D+R FD + ++ V
Sbjct: 325 VSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVC 384
Query: 178 WNSVITACVENLWLRDG---VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
WN++++ +DG + FL+M GF P E + L +C ++ + +H
Sbjct: 385 WNALLSGYAN----KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHS 436
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFE------------------------- 269
+V G + + ++L+ Y K+ + A L+ +
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 270 -------RMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
+E+ + ++W+ I ++ + EE + LF+ M ++ NIRP+ T++ +L
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS--NIRPDKYTFVSILSL 554
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA-------MVDIYGRAGLLREAYEFIQSM 375
CS + G +HG+ A ++D+YG+ G +R + +
Sbjct: 555 CSKLCDLTLG-------SSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 376 PVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL-VEPRRGGNLVIVANLYAEAGMW 434
+ I W L+S +H + + + +K ++ L L +P R + I+ GM
Sbjct: 608 R-EKNLITWTALISCLGIH-GYGQEAL-EKFKETLSLGFKPDRVSFISILTAC-RHGGMV 663
Query: 435 ERAANVRRVMRDGGMK 450
+ + + M+D G++
Sbjct: 664 KEGMGLFQKMKDYGVE 679
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 4/242 (1%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
KL+ P +SWNI I + SD E I +F+ M + ++P+K TF +L C+
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 124 ALREGKQVHADAVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI 182
L G +H K +D +V N LI+ YG+C I KVF+E E+ ++W ++I
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALI 619
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
+ + + ++ +E F + GF+PD S + +L+AC G + G + ++ G+
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
Query: 243 LSCQLGTALVDMYGKSGALGYAR-LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEM 301
VD+ ++G L A L+ E + W + G + FAEE + +
Sbjct: 680 PEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR--FAEEQRNTLNV 737
Query: 302 MS 303
+S
Sbjct: 738 VS 739
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 201/403 (49%), Gaps = 14/403 (3%)
Query: 57 KNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
K+L ARK+ + +SW L+ + S EA +F M ER N ++ L+
Sbjct: 159 KDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER----NLGSWNALV 214
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
L K++ + K D+ ++I+ Y + ++ AR +F+E
Sbjct: 215 DGLVKSGDLVNAKKLFDEMPK----RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+W+++I +N + + F +M +PDE MV ++SAC+++G L V +
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 237 VLRGMVLSCQ-LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
R S + AL+DM K G + A +FE M +R+++++ +M+ G+A HG EA
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
+ LFE M + + I P+ V + +L C + +V+EG RYF M + I HY +
Sbjct: 391 IRLFEKMVD--EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
V++ R G L+EAYE I+SMP W +LL CS+ H T I + V + L +EP
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSL---HGNTEIAEVVARHLFELEP 505
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCV 458
+ G+ V+++N+YA W A++R M + G+ K+ G S +
Sbjct: 506 QSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 197/401 (49%), Gaps = 35/401 (8%)
Query: 14 SLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPS 73
+L LC+S L+QI A+ G + L+S + S S S + + + + PS
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFI---SSSSSSSSSLSYSSSVFERVPS 71
Query: 74 PIS--WNILIRGFATSDSPIEAIWVFRKMRERGV-KPNKLTFPFLLKCCAVGSALREGKQ 130
P + WN LI+G++ E + + +M G+ +P++ TFP ++K C+ +R G
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
VH ++ G D DV VG + ++FYG+CK + ARKVF EMPER VSW +++ A V++
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
L + F M E + S ++ + G L + + ++ R ++ T+
Sbjct: 192 LEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY----TS 243
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
++D Y K G + AR +FE +V WSA+ILG AQ+G EA +F M N++
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK--NVK 301
Query: 311 PNYVTYLGVLCACSHAGMVD-----EGYRYFREMEY-VHGIKPLMVHYGAMVDIYGRAGL 364
P+ +G++ ACS G + + Y + R ++ H + P A++D+ + G
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP------ALIDMNAKCGH 355
Query: 365 LREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDK 405
+ A + + MP R L+S CS+ + G G +
Sbjct: 356 MDRAAKLFEEMP-------QRDLVSYCSMMEGMAIHGCGSE 389
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 195/391 (49%), Gaps = 16/391 (4%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
ISWN ++ A S ++++ +F KM+ G +P+ F L C+ S ++ GKQ+H
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 135 AVKFGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRD 193
+K G D S ++V + LI+ YG+C I ++ ++ +P NS++T+ + +D
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR------WVHCQVVLRGMVLSCQL 247
+E F M G DE ++ +L A + LSL VHC + G +
Sbjct: 401 IIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAV 456
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+L+D Y KSG +R VF+ ++ N+ +++I G A++G + + + M +
Sbjct: 457 SCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM--DRM 514
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
N+ P+ VT L VL CSH+G+V+EG F +E +GI P Y MVD+ GRAGL+ +
Sbjct: 515 NLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEK 574
Query: 368 AYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANL 427
A + + D + W +LL +C +H IG + + L+ +EP + V+
Sbjct: 575 AERLLLQARGDADCVAWSSLLQSCRIHRNET---IGRRAAEVLMNLEPENFAVYIQVSKF 631
Query: 428 YAEAGMWERAANVRRVMRDGGMKKMAGESCV 458
Y E G +E + +R + + + G S V
Sbjct: 632 YFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 166/357 (46%), Gaps = 49/357 (13%)
Query: 78 NILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVK 137
N+L+R F + V+ +M GV N LT+ ++++ C+ + EGKQ+H+ VK
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 138 FGLD-SDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
G + S+++V N L+++Y C + + + F+ +PE+ +SWNS+++ C + + D ++
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 197 YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM-VLSCQLGTALVDMY 255
F KM+ G P + L+ C+ + G+ +HC V+ G V S + +AL+DMY
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
GK + + L+++ + N+ ++++ L G ++ + +F +M + I + VT
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI--DEVT 419
Query: 316 YLGVL-------------CACSHAGMVDEGY------------------------RYFRE 338
VL C H + GY + F E
Sbjct: 420 LSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDE 479
Query: 339 MEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSACS 392
++ P + ++++ Y R G+ + + ++ M + PD + ++LS CS
Sbjct: 480 LD-----TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCS 531
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 159/342 (46%), Gaps = 16/342 (4%)
Query: 45 SELVY-----VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRK 99
S+LVY + L S NL A + + +++N+LI G + + AI ++ +
Sbjct: 43 SDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAE 102
Query: 100 MRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKK 159
M G++ + TFP +L C+ REG QVH + G +++V + L+ Y C +
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLR 161
Query: 160 ILD-ARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLS 218
++D A K+FDEM +R N ++ + + E +L+M G + + M+
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 219 ACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTALVDMYGKSGALGYARLVFERMEKRNVL 277
C+ + G+ +H VV G +S + LVD Y G L + F + +++V+
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Query: 278 TWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR--- 334
+W++++ A +G ++L LF M RP+ ++ L CS + G +
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKM--QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHC 339
Query: 335 YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
Y +M + + L V A++D+YG+ + + QS+P
Sbjct: 340 YVLKMGF--DVSSLHVQ-SALIDMYGKCNGIENSALLYQSLP 378
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 197/407 (48%), Gaps = 39/407 (9%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ A+K+ + I WN L+ +A S EA+ +F M+ GV PN +T+ ++
Sbjct: 425 SIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
S LR G+ A + + S + N +S
Sbjct: 485 -----SLLRNGQVDEAKDMFLQMQSSGIIPN--------------------------LIS 513
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W +++ V+N + + + KM+ SG P+ S+ + LSACA L L +GR +H ++
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Query: 238 LRGMVLS--CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
R + S + T+LVDMY K G + A VF + +AMI A +G +EA
Sbjct: 574 -RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEA 632
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
++L+ S ++P+ +T VL AC+HAG +++ F ++ +KP + HYG M
Sbjct: 633 IALYR--SLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLM 690
Query: 356 VDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP 415
VD+ AG +A I+ MP PD + ++L+++C + +T + D + ++LL EP
Sbjct: 691 VDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC---NKQRKTELVDYLSRKLLESEP 747
Query: 416 RRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGG 462
GN V ++N YA G W+ +R +M+ G+KK G S + + G
Sbjct: 748 ENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 191/377 (50%), Gaps = 16/377 (4%)
Query: 20 RSIDQLHQIQAQFHIHGHYH--NTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISW 77
R + QI A+ +G ++ N Y+ ++LV + L A L + SW
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIF--YAKCDALEIAEVLFSKLRVRNVFSW 141
Query: 78 NILIRGFATSDSPIE-AIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
+I G E A+ F +M E + P+ P + K C R G+ VH V
Sbjct: 142 AAII-GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVV 200
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVE 196
K GL+ V+V ++L + YG+C + DA KVFDE+P+R V+WN+++ V+N + +
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 197 YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYG 256
F MR G EP ++ LSA A +G + G+ H ++ GM L LGT+L++ Y
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 257 KSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTY 316
K G + YA +VF+RM +++V+TW+ +I G Q G E+A+ + ++M + ++ + VT
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM--RLEKLKYDCVTL 378
Query: 317 LGVLCACSHAGMVDEGYRYFREME---YVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
++ A + E + +E++ H + +V ++D+Y + G + +A +
Sbjct: 379 ATLMSAAART----ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD 434
Query: 374 SMPVNPDPIVWRTLLSA 390
S V D I+W TLL+A
Sbjct: 435 S-TVEKDLILWNTLLAA 450
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 227/486 (46%), Gaps = 32/486 (6%)
Query: 17 NLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKN----LTHARKLVLHSATP 72
N+C++ L + +HG+ + L + SL+ L A K+
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR 237
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+ ++WN L+ G+ + EAI +F MR++GV+P ++T L A + EGKQ H
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLR 192
A A+ G++ D +G +L+NFY + I A VFD M E+ V+WN +I+ V+ +
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE 357
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALV 252
D + MR + D ++ ++SA A L LG+ V C + L + ++
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417
Query: 253 DMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPN 312
DMY K G++ A+ VF+ +++++ W+ ++ A+ G + EAL LF M + + PN
Sbjct: 418 DMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM--QLEGVPPN 475
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
+T+ ++ + G VDE F +M+ GI P ++ + M++ + G EA F+
Sbjct: 476 VITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFL 534
Query: 373 QSMP---VNPDPIVWRTLLSAC----SVHDAHDRTG--IGDKVRKELLLVEPRRGGNLVI 423
+ M + P+ LSAC S+H G I + L+ +E
Sbjct: 535 RKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETS------- 587
Query: 424 VANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHL 483
+ ++YA+ G +A V K+ E + L +MI +A Y + + I +Y
Sbjct: 588 LVDMYAKCGDINKAEKVFG-------SKLYSE--LPLSNAMISAYALYGNLKEAIALYRS 638
Query: 484 LDGLNL 489
L+G+ L
Sbjct: 639 LEGVGL 644
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 150/321 (46%), Gaps = 6/321 (1%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+PS S+ + + EA+ + +M R ++ + +L+ C L GKQ
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 131 VHADAVKFG--LDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN 188
+HA +K G + Y+ L+ FY +C + A +F ++ R SW ++I
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+ F++M + PD + + AC L + GR VH VV G+ +
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 249 TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
++L DMYGK G L A VF+ + RN + W+A+++G Q+G EEA+ LF M +
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ--G 269
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
+ P VT L A ++ G V+EG + + V+G++ + ++++ Y + GL+ A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEG-KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 369 YEFIQSMPVNPDPIVWRTLLS 389
E + D + W ++S
Sbjct: 329 -EMVFDRMFEKDVVTWNLIIS 348
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 213/497 (42%), Gaps = 76/497 (15%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
+K+ T +W +I G + +A+ +FRKM GV PN +T + C+
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 123 SALREGKQVHADAVKFGL-------------------------------DSDVYVGNNLI 151
+ +G +VH+ AVK G + DVY N++I
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMI 425
Query: 152 NFY---GRCKKILD--------------------------------ARKVFDEMP----- 171
Y G C K + A +F M
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
+R +WN +I ++N + +E F KM+ S F P+ +++ +L ACA L + R
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGF 291
+H V+ R + + AL D Y KSG + Y+R +F ME ++++TW+++I G HG
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
AL+LF M I PN T ++ A G VDEG + F + + I P + H
Sbjct: 606 YGPALALFNQMKTQ--GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEH 663
Query: 352 YGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELL 411
AMV +YGRA L EA +FIQ M + + +W + L+ C +H D + + L
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDID---MAIHAAENLF 720
Query: 412 LVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGSMIRFFAGY 471
+EP IV+ +YA R+ + RD +KK G+S +++ + F G
Sbjct: 721 SLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD 780
Query: 472 DSRPDLIPVYHLLDGLN 488
S+ +Y L++ ++
Sbjct: 781 QSKLCTDVLYPLVEKMS 797
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 178/358 (49%), Gaps = 15/358 (4%)
Query: 89 SPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGL--DSDVYV 146
S +EA + ++G K + T+ LL+ C ++ G+ +HA +FGL + DV+V
Sbjct: 61 SLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFV 117
Query: 147 GNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA-CVENLWLRDGVEYFLKMRGSG 205
L++ Y +C I DARKVFD M ER +W+++I A EN W R+ + F M G
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRW-REVAKLFRLMMKDG 176
Query: 206 FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYAR 265
PD+ +L CA G + G+ +H V+ GM ++ +++ +Y K G L +A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 266 LVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
F RM +R+V+ W++++L Q+G EEA+ L + M + + I P VT+ ++ +
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK--EGISPGLVTWNILIGGYNQ 294
Query: 326 AGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPI 382
G D ++ME GI + + AM+ G+ +A + + M V P+ +
Sbjct: 295 LGKCDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 383 VWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANV 440
+ +SACS ++ + ++ ++ GN ++ ++Y++ G E A V
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV--DMYSKCGKLEDARKV 409
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 35/332 (10%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ ARK+ + +W+ +I ++ + E +FR M + GV P+ FP +L+
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
CA + GK +H+ +K G+ S + V N+++ Y +C ++ A K F M ER ++W
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
NSV+ A +N + VE +M G P + +++ GY LG+ C
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG-----GYNQLGK---CD--- 299
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
A +D+ K G VF TW+AMI GL +G +AL +
Sbjct: 300 -----------AAMDLMQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDM 339
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F M + PN VT + + ACS ++++G + I ++V ++VD+
Sbjct: 340 FRKMF--LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVG-NSLVDM 396
Query: 359 YGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
Y + G L +A + S+ N D W ++++
Sbjct: 397 YSKCGKLEDARKVFDSVK-NKDVYTWNSMITG 427
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 13/307 (4%)
Query: 93 AIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLIN 152
A FR+MRER V LL C G E ++ + K G+ + N LI
Sbjct: 235 ATKFFRRMRERDVIAWN---SVLLAYCQNGKH-EEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 153 FY---GRCKKILDARKVFDEMPERTPV-SWNSVITACVENLWLRDGVEYFLKMRGSGFEP 208
Y G+C +D + + V +W ++I+ + N ++ F KM +G P
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVF 268
+ +++ +SAC+ L ++ G VH V G + +G +LVDMY K G L AR VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 269 ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM 328
+ ++ ++V TW++MI G Q G+ +A LF M + N+RPN +T+ ++ G
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA--NLRPNIITWNTMISGYIKNGD 468
Query: 329 VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN---PDPIVWR 385
E F+ ME ++ + ++ Y + G EA E + M + P+ +
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 386 TLLSACS 392
+LL AC+
Sbjct: 529 SLLPACA 535
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 52 SLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLT 111
+ + S ++ ++R + L T I+WN LI G+ S A+ +F +M+ +G+ PN+ T
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 112 FPFLLKCCAVGSALREGKQV-HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM 170
++ + + EGK+V ++ A + + + + ++ YGR ++ +A + EM
Sbjct: 628 LSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 171 --PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGF--EPDETSMVLMLSACAELGYL 226
TP+ W S +T C + ++ + + F EP+ T+ ++S LG
Sbjct: 688 NIQSETPI-WESFLTGCR----IHGDIDMAIHAAENLFSLEPENTATESIVSQIYALG-A 741
Query: 227 SLGRWVHCQVVLRGMVLSCQLGTALVDM 254
LGR + R +L LG + +++
Sbjct: 742 KLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 6/336 (1%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVK-PNKLTFPFLL 116
+L +ARK+ + ++W +I G+ EA +F + G++ N+ F LL
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 117 KCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV 176
C+ + G+QVH + VK G+ ++ V ++L+ FY +C ++ A + FD M E+ +
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
SW +VI+AC + F+ M F P+E ++ +L AC+E L GR VH V
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEAL 296
V R + +GT+L+DMY K G + R VF+ M RN +TW+++I A+ GF EEA+
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMV 356
SLF +M H + N +T + +L AC G + G ++ + I+ + +V
Sbjct: 371 SLFRIMKRRH--LIANNLTVVSILRACGSVGALLLGKELHAQI-IKNSIEKNVYIGSTLV 427
Query: 357 DIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
+Y + G R+A+ +Q +P + D + W ++S CS
Sbjct: 428 WLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCS 462
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 190/388 (48%), Gaps = 14/388 (3%)
Query: 6 LSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGH-----YHNTYLLSELVYVCSLSPSKNLT 60
+N+ + LLNLC + + + +HG+ N + S LVY + LT
Sbjct: 181 FTNERMFVCLLNLC---SRRAEFELGRQVHGNMVKVGVGNLIVESSLVYF--YAQCGELT 235
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
A + ISW +I + I+AI +F M PN+ T +LK C+
Sbjct: 236 SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNS 180
ALR G+QVH+ VK + +DV+VG +L++ Y +C +I D RKVFD M R V+W S
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 355
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+I A + + + F M+ + ++V +L AC +G L LG+ +H Q++
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
+ + +G+ LV +Y K G A V +++ R+V++W+AMI G + G EAL +
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M + + + PN TY L AC+++ + G + H + + V A++ +Y
Sbjct: 476 EMIQ--EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYA 532
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLL 388
+ G + EA+ SMP + + W+ ++
Sbjct: 533 KCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 130/244 (53%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
++ RK+ + + ++W +I A EAI +FR M+ R + N LT +L+
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSW 178
C AL GK++HA +K ++ +VY+G+ L+ Y +C + DA V ++P R VSW
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
++I+ C + +++ +M G EP+ + L ACA L +GR +H
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSL 298
+ + +G+AL+ MY K G + A VF+ M ++N+++W AMI+G A++GF EAL L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 299 FEMM 302
M
Sbjct: 575 MYRM 578
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 7/222 (3%)
Query: 6 LSNKNQCLSLLNLCRSIDQL---HQIQAQFHIHGHYHNTYLLSELVYV-CSLSPSKNLTH 61
++N +S+L C S+ L ++ AQ + N Y+ S LV++ C S++
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD--- 438
Query: 62 ARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAV 121
A ++ + +SW +I G ++ EA+ ++M + GV+PN T+ LK CA
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
+L G+ +H+ A K S+V+VG+ LI+ Y +C + +A +VFD MPE+ VSW ++
Sbjct: 499 SESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAM 558
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
I N + R+ ++ +M GFE D+ +LS C ++
Sbjct: 559 IMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 161/329 (48%), Gaps = 20/329 (6%)
Query: 107 PNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKV 166
++ + L + + +R K++HA A+K D +Y GNNLI+ R ++ ARKV
Sbjct: 80 SERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKV 139
Query: 167 FDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFE-PDETSMVLMLSACAELGY 225
FD MPE+ V+W ++I ++ + F G +E V +L+ C+
Sbjct: 140 FDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAE 199
Query: 226 LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILG 285
LGR VH +V G V + + ++LV Y + G L A F+ ME+++V++W+A+I
Sbjct: 200 FELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISA 258
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYV--- 342
++ G +A+ +F M NH + PN T +L ACS ++ R+ R++ +
Sbjct: 259 CSRKGHGIKAIGMFIGML-NHWFL-PNEFTVCSILKACSE----EKALRFGRQVHSLVVK 312
Query: 343 HGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGI 402
IK + +++D+Y + G + + + M N + + W ++++ AH R G
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIA------AHAREGF 365
Query: 403 GDKVRKELLLVEPRR--GGNLVIVANLYA 429
G++ +++ R NL +V+ L A
Sbjct: 366 GEEAISLFRIMKRRHLIANNLTVVSILRA 394
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 177/333 (53%), Gaps = 4/333 (1%)
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
AR+L + +SWN ++ G+ + EA+ MR+ + +T ++L C+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE-RTPVSWN 179
S ++ GKQ H + G D++V V N L++ YG+C + A F +M E R VSWN
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+++T + +F M+ +P + ++ +L+ CA + L+LG+ +H ++
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G + + A+VDMY K YA VF+ R+++ W+++I G ++G ++E LF
Sbjct: 526 GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
M+ EN + ++P++VT+LG+L AC G V+ G++YF M + I P + HY M+++Y
Sbjct: 586 -MLLEN-EGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Query: 360 GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
+ G L + EF+ MP +P + + AC
Sbjct: 644 CKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQ 676
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 196/422 (46%), Gaps = 45/422 (10%)
Query: 25 LHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGF 84
L Q+ +G+ N L + +V V + ++ AR++ PS +SWN+++R +
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDV--YGKCRVMSDARRVFDEIVNPSDVSWNVIVRRY 238
Query: 85 ATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDV 144
EA+ +F KM E V+P T ++ C+ AL GK +HA AVK + +D
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 145 YVGNNLINFYGRCKKILDARKVFDE-------------------------------MPER 173
V ++ + Y +C ++ AR+VFD+ MPER
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 174 TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVH 233
VSWN+++ V + +++ MR D ++V +L+ C+ + + +G+ H
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 234 CQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM-EKRNVLTWSAMILGLAQHGFA 292
+ G + + AL+DMYGK G L A + F +M E R+ ++W+A++ G+A+ G +
Sbjct: 419 GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
E+ALS FE M +P+ T +L C++ ++ G + G K +V
Sbjct: 479 EQALSFFEGM---QVEAKPSKYTLATLLAGCANIPALNLG-KAIHGFLIRDGYKIDVVIR 534
Query: 353 GAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLL 412
GAMVD+Y + A E + D I+W +++ C R G +V + +L
Sbjct: 535 GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCC------RNGRSKEVFELFML 587
Query: 413 VE 414
+E
Sbjct: 588 LE 589
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 40/351 (11%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
SWN +I A + E +FR+M GV+ + +F +LK C + LR +Q+H
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV 188
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
VK+G +V + ++++ YG+C+ + DAR+VFDE+ + VSWN ++ +E + + V
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMY 255
F KM P ++ ++ AC+ L +G+ +H V +V + T++ DMY
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMY 308
Query: 256 GKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVT 315
K L AR VF++ +++ +W++ + G A G EA LF++M E N V+
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER------NIVS 362
Query: 316 YLGVLCACSHAGMVDEGYRYF----REME------------------------------Y 341
+ +L HA DE + +E+E Y
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACS 392
HG ++ A++D+YG+ G L+ A + + M D + W LL+ +
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 10/331 (3%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
L + C+ + + + ++V + V F +++ N I YG+C + DAR++F+EMPER
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
SWN+VITAC +N + F +M G ETS +L +C + L L R +HC
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
VV G + L T++VD+YGK + AR VF+ + + ++W+ ++ + GF +E
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDE 246
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
A+ +F M E N+RP T V+ ACS + ++ G + + + V +
Sbjct: 247 AVVMFFKMLEL--NVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTS 303
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
+ D+Y + L A D + L S S + +G+ + R+ L+
Sbjct: 304 VFDMYVKCDRLESARRVF-------DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 415 PRRGGNLVIVANLYAEAGMWERAANVRRVMR 445
R + + Y A W+ A + +MR
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 11/221 (4%)
Query: 15 LLNLCRSIDQLH---QIQAQFHIHGHYHNTYLLSELVYV---CSLSPSKNLTHARKLVLH 68
+LN+C I + Q + HG+ N + + L+ + C S N+ +
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM---- 456
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG 128
S +SWN L+ G A +A+ F M+ KP+K T LL CA AL G
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG 515
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVEN 188
K +H ++ G DV + +++ Y +C+ A +VF E R + WNS+I C N
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRN 575
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLG 229
++ E F+ + G +PD + + +L AC G++ LG
Sbjct: 576 GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 159/311 (51%), Gaps = 2/311 (0%)
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK 117
++ R++ S + ISW L+ G+A + +A+ M++ G +P+ +T +L
Sbjct: 367 DMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 118 CCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVS 177
CA A+++GK++H A+K +V + +L+ Y +C ++FD + +R +
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKA 486
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
W ++I VEN LR G+E F M S PD +M +L+ C++L L LG+ +H ++
Sbjct: 487 WTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHIL 546
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALS 297
+ + ++ MYGK G L A F+ + + LTW+A+I + +A++
Sbjct: 547 KKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAIN 606
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
FE M PN T+ VL CS AG VDE YR+F M ++ ++P HY +++
Sbjct: 607 CFEQMVSR--GFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE 664
Query: 358 IYGRAGLLREA 368
+ R G + EA
Sbjct: 665 LLNRCGRVEEA 675
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 165/332 (49%), Gaps = 11/332 (3%)
Query: 8 NKNQCLSLLNLC-RSIDQLH--QIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARK 64
N +LL C R LH Q+ I+G N +L ++LV++ + S + A+K
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS--VKDAQK 167
Query: 65 LVLHSATPSPISWNILIRGFATSDSP--IEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
+ S + + SWN L+RG S + + F +MRE GV N + + K A
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVI 182
SALR+G + HA A+K GL + V++ +L++ Y +C K+ AR+VFDE+ ER V W ++I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 183 TACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL-RG 240
N + + F M P+ + +L ++ L LG+ VH V+ +
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFE 300
V + + L+D+Y K G + R VF ++RN ++W+A++ G A +G ++AL
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEG 332
M + + RP+ VT VL C+ + +G
Sbjct: 408 WMQQ--EGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 23/362 (6%)
Query: 52 SLSPSKNLTHARK-------LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERG 104
S SP+K R+ L LHS P I +I I FA ++ A+ + + +RG
Sbjct: 49 STSPAKKPKPFRERDAFPSSLPLHSKNPYIIHRDIQI--FARQNNLEVALTILDYLEQRG 106
Query: 105 VKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDAR 164
+ N TF LL+ C +L GKQVH GL+S+ ++ L++ Y C + DA+
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQ 166
Query: 165 KVFDEMPERTPVSWNSVITACVENLWLR--DGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
KVFDE SWN+++ V + R D + F +MR G + + S+ + + A
Sbjct: 167 KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAG 226
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAM 282
L G H + G+ S L T+LVDMY K G +G AR VF+ + +R+++ W AM
Sbjct: 227 ASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAM 286
Query: 283 ILGLAQHGFAEEALSLFEMMSENHDNIRPNYV---TYLGVLCACSHAGMVDEGYRY-FRE 338
I GLA + EAL LF M + + I PN V T L VL + E + + +
Sbjct: 287 IAGLAHNKRQWEALGLFRTMI-SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 339 MEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE-FIQSMPVNPDPIVWRTLLSACSVHDAH 397
YV +P VH G ++D+Y + G + F S N I W L+S + +
Sbjct: 346 KNYVE--QPF-VHSG-LIDLYCKCGDMASGRRVFYGSKQRN--AISWTALMSGYAANGRF 399
Query: 398 DR 399
D+
Sbjct: 400 DQ 401
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 27/400 (6%)
Query: 1 MNTRSLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELV---YVCSLSPSK 57
+N SLSN + + + R + H + + +G +++ +L + LV + C
Sbjct: 212 LNVYSLSNVFKSFAGASALRQGLKTHALAIK---NGLFNSVFLKTSLVDMYFKCG----- 263
Query: 58 NLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPNKLTFPFLL 116
+ AR++ + W +I G A + EA+ +FR M E + PN + +L
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 117 KCCAVGSALREGKQVHADAVKF-GLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP 175
AL+ GK+VHA +K +V + LI+ Y +C + R+VF +R
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+SW ++++ N + + M+ GF PD ++ +L CAEL + G+ +HC
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY 443
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEA 295
+ + + L T+L+ MY K G Y +F+R+E+RNV W+AMI ++
Sbjct: 444 ALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAG 503
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVLCACS-----HAGMVDEGYRYFREMEYVHGIKPLMV 350
+ +F +M + RP+ VT VL CS G G+ +E E + +
Sbjct: 504 IEVFRLMLLSKH--RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS---- 557
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
++ +YG+ G LR A ++ V + W ++ A
Sbjct: 558 --ARIIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAIIEA 594
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 210/448 (46%), Gaps = 44/448 (9%)
Query: 31 QFHIHGHYHNTYLLSELVYVCS---LSPSKNLTHARKLVLHSATPSPISWNILIRGFATS 87
+ H + N + + + C+ LSP H++ + L + + N LI +
Sbjct: 146 ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC 205
Query: 88 DSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGL------- 140
+A+ VF+ M E+ + +++ ++ C+ R GK ++ GL
Sbjct: 206 GFMDDAVLVFQHMEEK----DTVSWNAIVASCS-----RNGK------LELGLWFFHQMP 250
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
+ D N LI+ + + +A +V +MP SWN+++T V + + E+F K
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGA 260
M SG DE S+ ++L+A A L + G +H G+ + +AL+DMY K G
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 261 LGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
L +A L+F M ++N++ W+ MI G A++G + EA+ LF + + ++P+ T+L +L
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQER-FLKPDRFTFLNLL 429
Query: 321 CACSHAGM-VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNP 379
CSH + ++ YF M + IKP + H +++ G+ G + +A + IQ
Sbjct: 430 AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGY 489
Query: 380 DPIVWRTLLSACSVHD--------AHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEA 431
D + WR LL ACS A +GD + E L ++++NLYA
Sbjct: 490 DGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYL---------YIVMSNLYAYH 540
Query: 432 GMWERAANVRRVMRDGGMKKMAGESCVD 459
W +R++MR+ G+ K G S +D
Sbjct: 541 ERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 51/325 (15%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRE---RGVKPNKLTFPFLLKCCAVGSALR 126
+T S SW+ ++ A S I V R E G KP+ LL+ +
Sbjct: 17 STASSNSWSTIVPALARFGS----IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVS 72
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACV 186
+Q+H K G S+ + N+L+ FY + DA KVFDEMP+ +SWNS+++ V
Sbjct: 73 LCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL-SC 245
++ ++G+ FL++ S P+E S L+ACA L LG +H ++V G+ +
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 246 QLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
+G L+DMYGK G + A LVF+ ME+++ ++W+A++ +++G E L F M
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM--- 249
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
PN P V Y ++D + ++G
Sbjct: 250 -----PN----------------------------------PDTVTYNELIDAFVKSGDF 270
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSA 390
A++ + MP NP+ W T+L+
Sbjct: 271 NNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 177/412 (42%), Gaps = 54/412 (13%)
Query: 16 LNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHARKLVLHSATPSPI 75
++LCR QLH + HG NT L + L+ S S L A K+ P I
Sbjct: 71 VSLCR---QLHGYVTK---HGFVSNTRLSNSLMRFYKTSDS--LEDAHKVFDEMPDPDVI 122
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
SWN L+ G+ S E I +F ++ V PN+ +F L CA G +H+
Sbjct: 123 SWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKL 182
Query: 136 VKFGLDS-DVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
VK GL+ +V VGN LI+ YG+C + DA VF M E+ VSWN+++ +C N L G
Sbjct: 183 VKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELG 242
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ +F +M PD + L+D
Sbjct: 243 LWFFHQMP----NPDTVTY-----------------------------------NELIDA 263
Query: 255 YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYV 314
+ KSG A V M N +W+ ++ G + EA F M + +R +
Sbjct: 264 FVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM--HSSGVRFDEY 321
Query: 315 TYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQS 374
+ L ++ A A V + G+ +V A++D+Y + G+L+ A +
Sbjct: 322 S-LSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT 380
Query: 375 MPVNPDPIVWRTLLSACSVH-DAHDRTGIGDKVRKELLLVEPRRGGNLVIVA 425
MP + IVW ++S + + D+ + + +++++E L +P R L ++A
Sbjct: 381 MP-RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL-KPDRFTFLNLLA 430
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 40/346 (11%)
Query: 43 LLSELVYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRE 102
++S V + + K+L +ARK S +SWN ++ G+A + +A+ +F M
Sbjct: 198 VVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR 257
Query: 103 RGVKPNKLTFPFLLKCCA-------------------------VGSAL-------REGKQ 130
GV+PN+ T+ ++ C+ V +AL R+ +
Sbjct: 258 LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQS 317
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+ G ++ N +I+ Y R + AR++FD MP+R VSWNS+I N
Sbjct: 318 ARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Query: 191 LRDGVEYFLKMRGSG-FEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+E+F M G +PDE +M+ +LSAC + L LG + + + L+
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+L+ MY + G L A+ VF+ M++R+V++++ + A +G E L+L M + + I
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD--EGI 495
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
P+ VTY VL AC+ AG++ EG R F+ + PL HY M
Sbjct: 496 EPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 44/313 (14%)
Query: 141 DSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLK 200
++DV +I + + K + +ARK FD MPE++ VSWN++++ +N + D + F
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 201 MRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM------ 254
M G P+ET+ V+++SAC+ SL R + + + + L+C + TAL+DM
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 255 --------------------------YGKSGALGYARLVFERMEKRNVLTWSAMILGLAQ 288
Y + G + AR +F+ M KRNV++W+++I G A
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEG---YRYFREMEYVHGI 345
+G A A+ FE M + D+ +P+ VT + VL AC H ++ G Y R+ + I
Sbjct: 375 NGQAALAIEFFEDMIDYGDS-KPDEVTMISVLSACGHMADLELGDCIVDYIRK----NQI 429
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH-DAHDRTGIGD 404
K Y +++ +Y R G L EA M D + + TL +A + + D + +
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLS 488
Query: 405 KVRKELLLVEPRR 417
K++ E +EP R
Sbjct: 489 KMKDE--GIEPDR 499
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 116/294 (39%), Gaps = 34/294 (11%)
Query: 104 GVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKF-GLDSDVYVGNNLINFYGRCKK-IL 161
+ LTFP L Q+HA + F L Y + +I+ R +
Sbjct: 11 AIASQALTFPQL-------------NQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSY 57
Query: 162 DARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
R +FD + NS+ + D + + + G PD S +++ +
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSA 281
G L V G + ++DMY K ++ AR VF+++ +R W+
Sbjct: 118 RFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 282 MILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEY 341
MI G + G EEA LF+MM EN + V++ ++ + ++ +YF M
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPEN------DVVSWTVMITGFAKVKDLENARKYFDRMP- 225
Query: 342 VHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSACS 392
+ +V + AM+ Y + G +A M V P+ W ++SACS
Sbjct: 226 ----EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 16/283 (5%)
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVF 268
D + ++ + C E L + VH ++ L L++MY G A VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 269 ERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM 328
E+M ++N+ TW +I A++GF E+A+ +F E NI P+ + G+ AC G
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE-EGNI-PDGQLFRGIFYACGMLGD 370
Query: 329 VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
VDEG +F M +GI P + Y ++V++Y G L EA EF++ MP+ P+ VW TL+
Sbjct: 371 VDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
Query: 389 SACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGG 448
+ VH + +GD + + ++P R + E + +A++V +
Sbjct: 431 NLSRVHGNLE---LGDYCAEVVEFLDPTR------LNKQSREGFIPVKASDVEK----ES 477
Query: 449 MKKMAGESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDGLNLHL 491
+KK +G + SM F AG + P+ ++ LL L +H+
Sbjct: 478 LKKRSG-ILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHM 519
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT 174
L K C L+E K VH D+ + L+ Y C +A VF++M E+
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
+W +I +N + D ++ F + + G PD + AC LG + G +H
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHF 378
Query: 235 QVVLR--GMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILGLAQHGF 291
+ + R G+ S + +LV+MY G L A ERM + NV W ++ HG
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
Query: 292 AE 293
E
Sbjct: 439 LE 440
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 10/244 (4%)
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
P S V+ C L+ +D +E K G PD VL+ +CA L L + VH
Sbjct: 206 PPSVEEVMRLCQRRLY-KDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHD 260
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEE 294
+ +L ++ M+G+ ++ A+ VF+ M +++ +W M+ + +G ++
Sbjct: 261 HFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDD 320
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
AL LFE M+++ ++PN T+L V AC+ G ++E + +F M+ HGI P HY
Sbjct: 321 ALHLFEEMTKH--GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLG 378
Query: 355 MVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
++ + G+ G L EA ++I+ +P P W + + +H D + D + + ++ V+
Sbjct: 379 VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDID---LEDYMEELMVDVD 435
Query: 415 PRRG 418
P +
Sbjct: 436 PSKA 439
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 102 ERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKIL 161
++G P++ F L + CA +L K+VH ++ D + N +I+ +G C I
Sbjct: 229 DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSIT 288
Query: 162 DARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACA 221
DA++VFD M ++ SW+ ++ A +N D + F +M G +P+E + + + ACA
Sbjct: 289 DAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACA 348
Query: 222 ELG 224
+G
Sbjct: 349 TVG 351
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 166/336 (49%), Gaps = 22/336 (6%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+A+ +F +M +G++P+ T+ L+ C + ++ +D ++ ++ +V N+LI
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 152 NFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
+ + + K+++A K+FDEM +R+ V++NS+I + L + + F M
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
PD + +++ + + G + + RG+V + T L+ + ++ A++V
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 268 FERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
F++M N++T++ ++ GL ++G E+A+ +FE + ++ + P+ TY +
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS--KMEPDIYTYNIMSEGM 495
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN---PD 380
AG V++G+ F + + G+KP ++ Y M+ + + GL EAY M + PD
Sbjct: 496 CKAGKVEDGWDLFCSLS-LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 381 PIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
+ TL+ AH R GDK L+ E R
Sbjct: 555 SGTYNTLIR------AHLRD--GDKAASAELIKEMR 582
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 128/308 (41%), Gaps = 38/308 (12%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ +++N LI FA IEA +F +M +R + PN +T+ L+ + L E +Q+
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
V DV N LIN + + KK++D ++F +M R V T + +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF- 426
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
+ D MV Q+V G+ + L
Sbjct: 427 ------------QASDCDNAQMVFK------------------QMVSDGVHPNIMTYNTL 456
Query: 252 VDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+D K+G L A +VFE ++K ++ T++ M G+ + G E+ LF +S
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-- 514
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
++P+ + Y ++ G+ +E Y F +M+ G P Y ++ + R G
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE-DGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 368 AYEFIQSM 375
+ E I+ M
Sbjct: 574 SAELIKEM 581
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 41/335 (12%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS + ++ L+ A I KM GV N T+ ++ C S L +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
+K G + N+L+N + +I +A + D+M E
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM------------------ 164
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
G++PD + ++ + S + ++V++G A+
Sbjct: 165 -------------GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 252 VDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
++ K G A + +MEK +V+ +S +I L ++ ++AL+LF M ++
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM--DNK 269
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
IRP+ TY ++ + G + R +M I P +V + +++D + + G L E
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-LERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 368 AYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDR 399
A + M ++P+ + + +L++ +HD D
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 170/359 (47%), Gaps = 22/359 (6%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P + +N +I G +A+ +F++M +G++PN +T+ L+ C + ++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+D ++ ++ DV+ + LI+ + + K+++A K++DEM +R + V+++S+I
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ L + + F M PD + ++ + + G V ++ RG+V +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 248 GTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMS 303
L+ ++G A+ +F+ M N++T++ ++ GL ++G E+A+ +FE +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
+ + P TY ++ AG V++G+ F + + G+KP +V Y M+ + R G
Sbjct: 494 RSK--MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS-LKGVKPDVVAYNTMISGFCRKG 550
Query: 364 LLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
EA + M + P+ + TL+ A R GD+ L+ E R G
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRA--------RLRDGDREASAELIKEMRSCG 601
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 49/339 (14%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS I ++ L+ A + I + +M+ G+ N T+ L+ C S L V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM----PERTPVSWNSVITACVE 187
+K G + ++ ++L+N Y K+I +A + D+M + V++N++I
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ + + +M G +PD V VV+ G+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPD---------------------LVTYGVVVNGLC----- 232
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRN----VLTWSAMILGLAQHGFAEEALSLFEMMS 303
K G A + +ME+ VL ++ +I GL ++ ++AL+LF+ M
Sbjct: 233 ---------KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
IRPN VTY ++ + G + R +M I P + + A++D + + G
Sbjct: 284 TK--GIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEG 340
Query: 364 LLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDR 399
L EA + M ++P + + +L++ +HD D
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 126/315 (40%), Gaps = 38/315 (12%)
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
++ P +++ LI F +EA ++ +M +R + P+ +T+ L+ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
L E KQ+ V DV N LI + + K++ + +VF EM +R V
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
++ L+ + G + + + ++V G+ +
Sbjct: 437 LIQGLF-------------------------------QAGDCDMAQEIFKEMVSDGVPPN 465
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFE 300
L+D K+G L A +VFE +++ + T++ MI G+ + G E+ LF
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
+S ++P+ V Y ++ G +E F+EM+ G P Y ++
Sbjct: 526 NLS--LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTLIRARL 582
Query: 361 RAGLLREAYEFIQSM 375
R G + E I+ M
Sbjct: 583 RDGDREASAELIKEM 597
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 37/280 (13%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
++V S PS ++++ LI GF D EA +F M + P+ +T+ L+K
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM-PERTP---VSWN 179
+ EG +V + + GL + N LI + A+++F EM + P +++N
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+++ +N L + F ++ S EP + +M+ + G + G + C + L+
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ K +V+ ++ MI G + G EEA +LF
Sbjct: 531 GV-------------------------------KPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
+ M E D PN Y ++ A G + +EM
Sbjct: 560 KEMKE--DGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 21/338 (6%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
K++ PS + ++ ++ A S + I +F M G+ + ++ ++ C S
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWN 179
V +KFG + DV ++LIN + + ++ DA + +M E V +N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++I + + D VE F +M G D + +++ G GRW ++R
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA-----GLCCSGRWSDAARLMR 233
Query: 240 GMVL-----SCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHG 290
MV+ + TA++D++ K G A ++E M +R +V T++++I GL HG
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
+EA + ++M P+ VTY ++ + VDEG + FREM G+ +
Sbjct: 294 RVDEAKQMLDLMVTK--GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTI 350
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLL 388
Y ++ Y +AG A E M P+ + LL
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 43/292 (14%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+++N L+ G S +A + R M R + PN +TF ++ E +++ +
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVENLW 190
+ +D DV+ N+LIN ++ +A+++ D M + V++N++I ++
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ +G + F +M G +G + +++G
Sbjct: 330 VDEGTKLFREMAQRGL---------------------VGDTITYNTIIQG---------- 358
Query: 251 LVDMYGKSGALGYARLVFERMEKR-NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
Y ++G A+ +F RM+ R N+ T+S ++ GL + E+AL LFE M ++ I
Sbjct: 359 ----YFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE--I 412
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGR 361
+ TY V+ G V++ + FR + G+KP +V Y M+ + R
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLS-CKGLKPDVVSYTTMISGFCR 463
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 53/296 (17%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R +V+ P+ I++ +I F EA+ ++ +M R V P+ T+ L+ +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ E KQ+ V G DV N LIN + + K++ + K+F EM +R +++
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N++I GY GR Q +
Sbjct: 353 NTIIQ----------------------------------------GYFQAGRPDAAQEIF 372
Query: 239 RGMVLSCQLGTALVDMYG--KSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFA 292
M + T + +YG + + A ++FE M+K ++ T++ +I G+ + G
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPL 348
E+A LF +S ++P+ V+Y ++ D+ +R+M+ G+ PL
Sbjct: 433 EDAWDLFRSLS--CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE-DGLLPL 485
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 148/340 (43%), Gaps = 15/340 (4%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIW-VFRKMRERGVKPNKLTFPFLLKCCAV 121
+K+ P+ I++N+++ F +P I + KM+ G+ P+ T+ L+ CC
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 122 GSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVS 177
GS +E QV + G D N L++ YG+ + +A KV +EM + V+
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
+NS+I+A + L + +E +M G +PD + +LS G + + ++
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 238 LRGMVLSCQLGTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAE 293
G + A + MYG G +F+ + +++TW+ ++ Q+G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
E +F+ M P T+ ++ A S G ++ +R M G+ P + Y
Sbjct: 472 EVSGVFKEM--KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYN 528
Query: 354 AMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSA 390
++ R G+ ++ + + M P+ + + +LL A
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 208/513 (40%), Gaps = 58/513 (11%)
Query: 14 SLLNLCRSIDQLHQIQAQ----FHIHGHYHNTYLLSEL--VYVCSLSPSKNLTHARKLVL 67
+L+ C+ LHQ AQ G ++ + L VY S P + + ++VL
Sbjct: 284 TLITCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
+ +PS +++N LI +A EA+ + +M E+G KP+ T+ LL +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM------PERTPVSWNSV 181
+ + G ++ N I YG K + K+FDE+ P+ V+WN++
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD--IVTWNTL 460
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+ +N + F +M+ +GF P+ + ++SA + G V+ +++ G+
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQ-------HG 290
++ + G + V ME K N LT+ +++ A H
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
AEE S I P V ++ CS ++ E R F E++ G P +
Sbjct: 581 LAEEVYSGV---------IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDIT 630
Query: 351 HYGAMVDIYGRAGLLREA---YEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVR 407
+MV IYGR ++ +A ++++ P + +L+ +H G +++
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM---YMHSRSADFGKSEEIL 687
Query: 408 KELLL--VEPR-RGGNLVIVANLYAEAGMWERAANVRRVMRDGG-----------MKKMA 453
+E+L ++P N VI A Y A+ + MR+ G + A
Sbjct: 688 REILAKGIKPDIISYNTVIYA--YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 454 GESCVDLGGSMIRFFAGYDSRPDLIPVYHLLDG 486
+S + ++R+ + RP+ ++DG
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P ++N LI ++ S +A+ V+R+M + GV P+ T+ +L A G + ++V
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKI----LDARKVFDEMPERTPVSWNSVITACVE 187
A+ + +L++ Y K+I A +V+ + E V +++ C +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
L + F +++ GF PD T++ M+S ++ V + RG S
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 248 GTALVDMYGKSGALGYA----RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+L+ M+ +S G + R + + K ++++++ +I ++ +A +F M
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM- 725
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
+ I P+ +TY + + + M +E R M HG +P Y ++VD Y +
Sbjct: 726 -RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTYNSIVDGYCKLN 783
Query: 364 LLREAYEFIQSMPVNPDP 381
EA F++ + N DP
Sbjct: 784 RKDEAKLFVEDL-RNLDP 800
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 22/275 (8%)
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+L LR ++F+K + D + + +++S + G +S + + G L
Sbjct: 152 DLALR-AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYS 210
Query: 248 GTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFA-EEALSLFEMM 302
T+L+ + SG A VF++ME K ++T++ ++ + G + SL E M
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
D I P+ TY ++ C + E + F EM+ G V Y A++D+YG++
Sbjct: 271 KS--DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-AAGFSYDKVTYNALLDVYGKS 327
Query: 363 GLLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRK-ELLLVEPRRG 418
+EA + + M +N P + + +L+S A+ R G+ D+ + + + E
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLIS------AYARDGMLDEAMELKNQMAEKGTK 381
Query: 419 GNLVIVANL---YAEAGMWERAANVRRVMRDGGMK 450
++ L + AG E A ++ MR+ G K
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
V+ + + C++ W R+ VE + G+ D ++ + C + L R VH
Sbjct: 86 VTIETFDSLCIQGNW-REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHEC 144
Query: 236 VVLRGMVLSCQLG--TALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAE 293
++ +V C +G A+++MY ++ A VFE M + N T M+ +G+ E
Sbjct: 145 II--ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGE 202
Query: 294 EALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYG 353
EA+ LF E + +PN + V C+ G V EG F+ M +GI P M HY
Sbjct: 203 EAIDLFTRFKEEGN--KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH 260
Query: 354 AMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVH 394
++ + +G L EA F++ MP+ P VW TL++ VH
Sbjct: 261 SVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVH 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 23/345 (6%)
Query: 58 NLTHARKLVLHSATPSP-ISWNILIRGFAT---SDSPIEAIWVFRKMRERGVKPNKLTFP 113
LT + + T SP ++ N+ I F + + EA+ V + +G + +
Sbjct: 64 TLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLL 123
Query: 114 FLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER 173
L K C AL + VH + DV N +I Y C + DA KVF+EMPE
Sbjct: 124 GLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPE- 182
Query: 174 TPVSWNS----VITAC-VENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSL 228
WNS V+ C V N + + ++ F + + G +P+ + S C G +
Sbjct: 183 ----WNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKE 238
Query: 229 GRWVHCQVVLR--GMVLSCQLGTALVDMYGKSGALGYARLVFERME-KRNVLTWSAMILG 285
G + Q + R G+V S + ++ M SG L A ERM + +V W ++
Sbjct: 239 GS-LQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNL 297
Query: 286 LAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGI 345
HG E E++ E D R + V+ G L A + V + E +
Sbjct: 298 SRVHGDVELGDRCAELV-EKLDATRLDKVSSAG-LVATKASDFVKKEPSTRSEPYFYSTF 355
Query: 346 KPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSA 390
+P+ + M IY LR ++ M PD +R+L+ A
Sbjct: 356 RPVDSSHPQMNIIYETLMSLRSQ---LKEMGYVPDTRYYRSLIMA 397
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 164/353 (46%), Gaps = 22/353 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ +N +I +A+ +F++M +G++PN +T+ L+ C + Q+ +D
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLW 190
++ ++ ++ N LI+ + + K ++A K+ D+M +R+ ++NS+I +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
L + F M PD + ++ + + G + ++ RG+V T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 251 LVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L+ G A+ VF++M +++T+S ++ GL +G E+AL +F+ M ++
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
I+ + Y ++ AG VD+G+ F + + G+KP +V Y M+ LL+
Sbjct: 426 --IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 367 EAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
EAY ++ M + PD + TL+ AH R GDK L+ E R
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIR------AHLRD--GDKAASAELIREMR 527
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 51/340 (15%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS +N L+ A I + KM+ G+ N T+ L+ C S + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
+K G + + ++L+N Y K+I DA + D+M E T + L+L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 192 R----DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ V +M G +P+ V VV+ G+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPN---------------------LVTYGVVVNGLC----- 161
Query: 248 GTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
K G + A + +ME + +V+ ++ +I L ++ ++AL+LF+ M
Sbjct: 162 ---------KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 304 ENHDNIRPNYVTYLGVL-CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
IRPN VTY ++ C CS+ D +E I P +V + A++D + +
Sbjct: 213 TK--GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE--KKINPNLVTFNALIDAFVKE 268
Query: 363 GLLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDR 399
G EA + M ++PD + +L++ +HD D+
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 173/369 (46%), Gaps = 22/369 (5%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
L+ +K+ P + +N +I + +A+ +F +M +G++PN +T+ L++C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT---- 174
+ ++ +D ++ ++ +V + LI+ + + K+++A K++DEM +R+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
+++S+I + L + F M P+ + ++ + + G +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVL----TWSAMILGLAQHG 290
++ RG+V + T L+ + ++ A++VF++M VL T+S ++ GL +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
E AL +FE + + + P+ TY ++ AG V++G+ F + + G+KP +V
Sbjct: 481 KVETALVVFEYLQRSK--MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVV 537
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVR 407
Y M+ + R GL EA + M PD + TL+ AH R GDK
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR------AHLRD--GDKAA 589
Query: 408 KELLLVEPR 416
L+ E R
Sbjct: 590 SAELIREMR 598
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 51/339 (15%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS + ++ L+ A + I + +M+ G+ N T+ L+ C S L V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
A +K G + D+ N+L+N + +I DA + +M E ++N++I
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ + V +M G +PD V +V+ G+
Sbjct: 199 HNRASEAVALVDRMVVKGCQPD---------------------LVTYGIVVNGLC----- 232
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRN----VLTWSAMILGLAQHGFAEEALSLFEMMS 303
K G + A + ++ME+ V+ ++ +I L + +AL+LF M
Sbjct: 233 ---------KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM- 282
Query: 304 ENHDNIRPNYVTYLGVL-CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
++ IRPN VTY ++ C C++ G + R +M I P +V + A++D + +
Sbjct: 283 -DNKGIRPNVVTYNSLIRCLCNY-GRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKE 339
Query: 363 GLLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHD 398
G L EA + M ++PD + +L++ +HD D
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 165/353 (46%), Gaps = 22/353 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ +N +I +A+ +F++M +G++PN +T+ L+ C + Q+ +D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLW 190
++ ++ ++ N LI+ + + K ++A K++D+M +R+ ++NS++ +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
L + F M PD + ++ + + G + ++ RG+V T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 251 LVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L+ G A+ VF++M +++T+S ++ GL +G E+AL +F+ M ++
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
I+ + Y ++ AG VD+G+ F + + G+KP +V Y M+ LL+
Sbjct: 501 --IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 367 EAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR 416
EAY ++ M + P+ + TL+ AH R GDK L+ E R
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIR------AHLRD--GDKAASAELIREMR 602
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 135/335 (40%), Gaps = 14/335 (4%)
Query: 17 NLC--RSIDQLHQIQAQFHIHGHYHNTYLLSELVY-VCSLSPSKNLTHA-RKLVLHSATP 72
+LC R +D + + G N S L+ +CS + + ++ P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
+ +++N LI F +EA ++ M +R + P+ T+ L+ + L + KQ+
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW-- 190
V DV N LI + + K++ D ++F EM R V T ++ L+
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 191 --LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+ + F +M G PD + ++L G L V + + L +
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 249 TALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
T +++ K+G + +F + K NV+T++ MI GL +EA +L + M E
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
D PN TY ++ A G REM
Sbjct: 569 --DGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 141/341 (41%), Gaps = 15/341 (4%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS + +N L+ A I + KM+ + T+ L+ C S + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
+K G + + ++L+N Y K+I DA + D+M E T + L+L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 192 R----DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ V +M G +P+ + ++++ + G L + ++ + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 248 GTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMS 303
++D K + A +F+ ME + NV+T+S++I L +G +A L M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD---IYG 360
E I PN VT+ ++ A G E + + +M I P + Y ++V+ ++
Sbjct: 323 EK--KINPNLVTFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHD 379
Query: 361 RAGLLREAYEFIQSMPVNPDPIVWRTLLSA-CSVHDAHDRT 400
R ++ +EF+ S PD + + TL+ C D T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 17/328 (5%)
Query: 61 HARKLVLH----SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL 116
HA KL+ TP +++N+L+ G EAI M G +PN +T +L
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 117 KC-CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER-- 173
+ C+ G + + +++ AD ++ G V N LINF R + A + ++MP+
Sbjct: 317 RSMCSTGRWM-DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 174 --TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
+S+N ++ + + +EY +M G PD + ML+A + G +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLA 287
+ Q+ +G ++D K+G G A + + M K + +T+S+++ GL+
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP 347
+ G +EA+ F IRPN VT+ ++ + D + M G KP
Sbjct: 496 REGKVDEAIKFFHEFERM--GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKP 552
Query: 348 LMVHYGAMVDIYGRAGLLREAYEFIQSM 375
Y +++ G+ +EA E + +
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 149/339 (43%), Gaps = 30/339 (8%)
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG 128
S +P +++N ++R S +A+ V +M +R P+ +T+ L++ S +
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 129 KQVHADAVKFGLDSDVYVGNNLINFYGRCK--KILDARKVFDEMP----ERTPVSWNSVI 182
++ + G DV N L+N G CK ++ +A K ++MP + ++ N ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVN--GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 183 -TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+ C W+ D + M GF P + ++++ G LGR + +L M
Sbjct: 317 RSMCSTGRWM-DAEKLLADMLRKGFSPSVVTFNILINFLCRKGL--LGRAID---ILEKM 370
Query: 242 VL-SCQLGT----ALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFA 292
CQ + L+ + K + A ERM R +++T++ M+ L + G
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
E+A+ + +S P +TY V+ + AG + + EM +KP + Y
Sbjct: 431 EDAVEILNQLSSK--GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR-AKDLKPDTITY 487
Query: 353 GAMVDIYGRAGLLREAYEF---IQSMPVNPDPIVWRTLL 388
++V R G + EA +F + M + P+ + + +++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 152/377 (40%), Gaps = 58/377 (15%)
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL----KCCA 120
+V H P I LIRGF +A + + G P+ +T+ ++ K
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 121 VGSALR--EGKQVHADAVKFGL------DS--------------------DVYVGNNLIN 152
+ +AL + V D V + DS DV LI
Sbjct: 188 INNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 153 FYGRCKKILDARKVFDEMPER--TP--VSWNSVITACVENLWLRDGVEYFLKMRGSGFEP 208
R + A K+ DEM +R TP V++N ++ + L + +++ M SG +P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 209 DE-TSMVLMLSACAELGYLSLGRWVHCQVVL-----RGMVLSCQLGTALVDMYGKSGALG 262
+ T +++ S C S GRW+ + +L +G S L++ + G LG
Sbjct: 308 NVITHNIILRSMC------STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 263 YARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLG 318
A + E+M + N L+++ ++ G + + A+ E M P+ VTY
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR--GCYPDIVTYNT 419
Query: 319 VLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM--- 375
+L A G V++ ++ G P+++ Y ++D +AG +A + + M
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 376 PVNPDPIVWRTLLSACS 392
+ PD I + +L+ S
Sbjct: 479 DLKPDTITYSSLVGGLS 495
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 18/354 (5%)
Query: 52 SLSPSKNLTHA----RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
++ +N++ A ++++ +P+ ++NILIRGF + + A+ +F KM +G P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
N +T+ L+ + +G ++ GL+ ++ N +IN R ++ + V
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 168 DEMPER----TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
EM R V++N++I + + +M G P + ++ + +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 224 GYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTW 279
G ++ Q+ +RG+ + + T LVD + + G + A V M +V+T+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 280 SAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
+A+I G G E+A+++ E M E + P+ V+Y VL + VDE R REM
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEK--GLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 340 EYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQSMPVNPDPIVWRTLLSA 390
GIKP + Y +++ + +EA YE + + + PD + L++A
Sbjct: 477 -VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 142/346 (41%), Gaps = 24/346 (6%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R + L P+ IS+N++I G E +V +M RG +++T+ L+K
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ +HA+ ++ GL V +LI+ + + A + D+M R ++
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
+++ + ++ + +M +GF P + +++ G+ G+ VL
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN-----GHCVTGKMEDAIAVL 438
Query: 239 RGM---------VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQH 289
M V + + Y AL R + E+ K + +T+S++I G +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 290 GFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM 349
+EA L+E M + P+ TY ++ A G +++ + EM G+ P +
Sbjct: 499 RRTKEACDLYEEMLRV--GLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVLPDV 555
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMPVN---PDPIVWRTLLSACS 392
V Y +++ + REA + + P + + TL+ CS
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 148/338 (43%), Gaps = 27/338 (7%)
Query: 61 HARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
HA +++ H TPS I++ LI + + A+ +MR RG+ PN+ T+ L+ +
Sbjct: 333 HA-EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER--TP--V 176
+ E +V + G V N LIN + K+ DA V ++M E+ +P V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
S+++V++ + + + + +M G +PD + ++ E ++ ++
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVL----TWSAMILGLAQHGFA 292
+ G+ TAL++ Y G L A + M ++ VL T+S +I GL +
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSH---------------AGMVDEGYRYFR 337
EA L ++ ++ P+ VTY ++ CS+ GM+ E + F
Sbjct: 572 REAKRL--LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 338 EMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
M KP Y M+ + RAG +R+AY + M
Sbjct: 630 SM-LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
+P +S++ ++ GF S EA+ V R+M E+G+KP+ +T+ L++ +E
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACV 186
++ + ++ GL D + LIN Y + A ++ +EM E+ V+++ +I
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
+ R+ LK+ P + + ++ C+ + + S+
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV------------------ 608
Query: 247 LGTALVDMYGKSGALGYARLVFERM----EKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
+L+ + G + A VFE M K + ++ MI G + G +A +L++ M
Sbjct: 609 --VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDE 331
++ + VT + ++ A G V+E
Sbjct: 667 VKS--GFLLHTVTVIALVKALHKEGKVNE 693
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R++V P I+++ LI+GF EA ++ +M G+ P++ T+ L+ +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDAR----KVFDEMPERTPVSW 178
L + Q+H + V+ G+ DV + LIN + + +A+ K+F E + V++
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 179 NSVITACVENLWLRDGV----------------EYFLKMRGSGFEPDETSMVLMLSACAE 222
+++I C N+ + V + F M G +PD T+ +M+
Sbjct: 594 HTLIENC-SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALG 262
G + ++ ++V G +L ALV K G +
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 152/330 (46%), Gaps = 14/330 (4%)
Query: 73 SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVH 132
SP ++ +++G +S A + ++M G +PN + + L+K S + +V
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 133 ADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVEN 188
+ + G+ D++ N+LI + K++ +AR EM E ++ + I+ +E
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+Y +MR G P++ +++ + G + + +V +G++ +
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 249 TALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
T L++ K+ + A +F M + +V ++ +I G ++ G ++A S+F+ M E
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
+ + PN + Y +L +G +++ EM V G+ P V Y ++D Y ++G
Sbjct: 656 --EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS-VKGLHPNAVTYCTIIDGYCKSGD 712
Query: 365 LREAYEFIQSMPVN---PDPIVWRTLLSAC 391
L EA+ M + PD V+ TL+ C
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 139/325 (42%), Gaps = 16/325 (4%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R +V ++ +L+ G +D +A +FR+MR +G+ P+ ++ L+ +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+++ + + V+ GL +V + N L+ + R +I A+++ DEM + V++
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
++I ++ L + F +M+ G PD ++ C L + +
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNK 759
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLV--------FERMEKRNVLTWSAMILGLAQHG 290
+G S AL++ K G V F+R K N +T++ MI L + G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
E A LF M + N+ P +TY +L G E + F E GI+P +
Sbjct: 820 NLEAAKELFHQM--QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPDHI 876
Query: 351 HYGAMVDIYGRAGLLREAYEFIQSM 375
Y +++ + + G+ +A + M
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQM 901
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 38/291 (13%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
P +N LI G + + EA +M E G+KPN T+ + S +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
+ + G+ + + LIN Y + K+++A + M ++ + T + L+
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 191 LRDGV----EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
D V E F +MRG G PD S ++++ ++LG + + ++V G+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT---- 659
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
NV+ ++ ++ G + G E+A L + MS
Sbjct: 660 ---------------------------PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK- 691
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
+ PN VTY ++ +G + E +R F EM+ + G+ P Y +VD
Sbjct: 692 -GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKGLVPDSFVYTTLVD 740
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 151/340 (44%), Gaps = 19/340 (5%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA-- 133
+++ LI + S EAI VF M+E G++PN +T+ ++ C G E KQV
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM--EFKQVAKFF 327
Query: 134 -DAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVSWNSVITACVEN 188
+ + G+ D N+L+ R AR +FDEM E+ S+N+++ A +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG 248
+ E +M P+ S ++ A+ G + ++ G+ L
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 249 TALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
L+ +Y K G A + M K++V+T++A++ G + G +E +F M
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
H + PN +TY ++ S G+ E FRE + G++ +V Y A++D + GL
Sbjct: 508 EH--VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDALCKNGL 564
Query: 365 LREAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTG 401
+ A I M ++P+ + + +++ A DR+
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Query: 128 GKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE----RTPVSWNSVIT 183
K++ A G + VY + LI+ YGR +A VF+ M E V++N+VI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 184 ACVE-NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
AC + + + ++F +M+ +G +PD + +L+ C+ G R + ++ R +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSL 298
L+D K G + A + +M + NV+++S +I G A+ G +EAL+L
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F M + I + V+Y +L + G +E REM V GIK +V Y A++
Sbjct: 432 FGEM--RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLGG 488
Query: 359 YGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSACS 392
YG+ G E + M V P+ + + TL+ S
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 246 QLGTALVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLFEM 301
+L +A++ G+ G + A+ +FE V +SA+I + G EEA+S+F
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 302 MSENHDNIRPNYVTYLGVLCACSHAGM-VDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M E +RPN VTY V+ AC GM + ++F EM+ +G++P + + +++ +
Sbjct: 294 MKEY--GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCS 350
Query: 361 RAGLLREAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEP-- 415
R GL A M + D + TLL A D + E+L P
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD-------LAFEILAQMPVK 403
Query: 416 RRGGNLV---IVANLYAEAGMWERAANVRRVMR 445
R N+V V + +A+AG ++ A N+ MR
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 125/313 (39%), Gaps = 43/313 (13%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ +S++ +I GFA + EA+ +F +MR G+ +++++ LL E +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+ G+ DV N L+ YG+ K + +KVF EM ++++++I +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
++ +E F + + +G D ++ A + G + + ++ G+ +
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
+++D +G+S + + L +S+ L + LF ++ +
Sbjct: 587 YNSIIDAFGRSATMDRS----ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 308 N---------------------------IRPNYVTYLGVLCACSH------AGMVDEGYR 334
N I+PN VT+ +L ACS A M+ E R
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Query: 335 YFREMEY--VHGI 345
F Y VHG+
Sbjct: 703 LFDNKVYGVVHGL 715
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 159/370 (42%), Gaps = 29/370 (7%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
+ H+R L PS I + L+ A + I +F +M+ G+ P T ++ C
Sbjct: 74 MVHSRPL------PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERT 174
+ S +K G + D+ +L+N Y +I DA +FD++ +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 175 PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
V++ ++I +N L VE F +M +G P+ + +++ E+G W+
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHG 290
++ R + + TAL+D + K G L A+ ++ M + +V T+ ++I GL +G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
+EA +F +M N PN V Y ++ + V++G + F EM G+ +
Sbjct: 308 LLDEARQMFYLMERN--GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ-KGVVANTI 364
Query: 351 HYGAMVDIY---GRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVR 407
Y ++ Y GR + +E + + S PD + LL D KV
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL---------DGLCCNGKVE 415
Query: 408 KELLLVEPRR 417
K L++ E R
Sbjct: 416 KALMIFEYMR 425
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 142/302 (47%), Gaps = 18/302 (5%)
Query: 53 LSPSKNLTHARKLVLHSAT----PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPN 108
L +++L HA +L T P+ +++N L+ G +A W+ R M +R ++PN
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 109 KLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKIL--DARKV 166
+TF L+ L E K+++ ++ + DV+ +LIN G C L +AR++
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN--GLCMYGLLDEARQM 315
Query: 167 FDEMPER----TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
F M V + ++I ++ + DG++ F +M G + + +++
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLT 278
+G + + V Q+ R + L+D +G + A ++FE M KR N++T
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 279 WSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFRE 338
++ +I G+ + G E+A LF S ++PN +TY ++ G++ E F++
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLF--CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 339 ME 340
M+
Sbjct: 494 MK 495
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 11/306 (3%)
Query: 78 NILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVK 137
N LI+ F E +WV+RKM+E G++P T+ FL+ + ++V
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 138 FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVENLWLRD 193
+ D+ N +I Y + + A + +M R +++ ++I AC +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
V + +M G + + L++ + G L+ G V ++ +G + + T L+D
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 254 MYGKSGALGYARLVFERM----EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
Y KSG++ A + RM K +V+T+S ++ GL ++G EEAL F D +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC--RFDGL 428
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
N + Y ++ AG VDE R F EM G Y A++D + + + EA
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSE-KGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 370 EFIQSM 375
+ M
Sbjct: 488 ALFKRM 493
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 135/296 (45%), Gaps = 18/296 (6%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P +++N +I+G+ + +A+ R M RG + +K+T+ +++ C S +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCK--KILDARKVFDEMPERTPVSWNSVITACVENL 189
+ + + G+ + + +I G CK K+ + VF+ M + ++ T ++
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIG--GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 190 W----LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYL--SLGRWVHCQVVLRGMVL 243
+ D + +M GF+PD + ++++ + G + +L + C+ G+ +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR--FDGLAI 430
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLF 299
+ ++L+D GK+G + A +FE M + R+ ++A+I +H +EA++LF
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAM 355
+ M E + Y TY +L +E + + +M GI P + A+
Sbjct: 491 KRMEEEEGCDQTVY-TYTILLSGMFKEHRNEEALKLW-DMMIDKGITPTAACFRAL 544
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 24/311 (7%)
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
VF M G+KPN +++ L+ AV V D + G+ DV L+N YG
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 156 RCKKILDARKVFDEM--PERTP--VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
R ++ A++VF M R P V++N++I A N +L + VE F +M G +P+
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVL-----RGMVLSCQLGTALVDMYGKSGALGYARL 266
S+ +L+AC+ + V+ VL RG+ L+ + + Y + L A
Sbjct: 330 SVCTLLAACSR-----SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
Query: 267 VFERMEKRNV----LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
+++ M K+ V +T++ +I G + EA+S + M + +I Y VLCA
Sbjct: 385 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED--LSIPLTKEVYSSVLCA 442
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN---P 379
S G V E F +M+ + G +P ++ Y +M+ Y + +A E M N P
Sbjct: 443 YSKQGQVTEAESIFNQMK-MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501
Query: 380 DPIVWRTLLSA 390
D I L+ A
Sbjct: 502 DSIACSALMRA 512
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 177/408 (43%), Gaps = 34/408 (8%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
+N++IR A + +A +F +M++ KP+ T+ L+ R + D +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVENLWLR 192
+ + NNLIN G +A +V +M + V+ N V++A
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG---- 248
+ YF M+G+ PD T+ +++ ++LG S + + +R C+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS--QALDLFNSMREKRAECRPDVVTF 191
Query: 249 TALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
T+++ +Y G + R VFE M K N+++++A++ A HG + ALS+ + +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
N I P+ V+Y +L + + + F M KP +V Y A++D YG G
Sbjct: 252 N--GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGF 308
Query: 365 LREAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR-RGGN 420
L EA E + M + P+ + TLL+ACS KV + +L + RG N
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK--------KKVNVDTVLSAAQSRGIN 360
Query: 421 LVIVA-----NLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGS 463
L A Y A E+A + + MR +K + + + GS
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 147/344 (42%), Gaps = 40/344 (11%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA------ 124
PS ++N LI +S + EA+ V +KM + GV P+ +T +L G
Sbjct: 78 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 137
Query: 125 ---LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
L +G +V D F + +Y + L G+ + LD +F+ M E+ V
Sbjct: 138 YFELMKGAKVRPDTTTFNI--IIYCLSKL----GQSSQALD---LFNSMREKRAECRPDV 188
Query: 182 IT-ACVENLWLRDG-VE----YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+T + +L+ G +E F M G +P+ S ++ A A G V
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGF 291
+ G++ T L++ YG+S G A+ VF M K NV+T++A+I +GF
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM---VDEGYRYFREMEYVHGIKPL 348
EA+ +F M + D I+PN V+ +L ACS + VD + GI
Sbjct: 309 LAEAVEIFRQMEQ--DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS----RGINLN 362
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLS 389
Y + + Y A L +A QSM V D + + L+S
Sbjct: 363 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 122/329 (37%), Gaps = 41/329 (12%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P +S+ L+ + S P +A VF MR+ KPN +T+ L+ L E ++
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+ G+ +V L+ R KK ++ V R ++NS I + +
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
L + + MR + D + +++S SC+
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISG------------------------SCR- 410
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
M A+ Y + + + +S+++ ++ G EA S+F M
Sbjct: 411 ------MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM--KMA 462
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
P+ + Y +L A + + + F EME +GI+P + A++ + + G
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEME-ANGIEPDSIACSALMRAFNKGGQPSN 521
Query: 368 AYEFIQSMPVNPDPI---VWRTLLSACSV 393
+ + M P V+ + SAC+
Sbjct: 522 VFVLMDLMREKEIPFTGAVFFEIFSACNT 550
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 33/359 (9%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS + + ++ A + I+++ KM G+ + +F L+ C S L +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE----RTPVSWNSVITACVE 187
+K G + +L+N + + + +A + D M V +N+VI +
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL---- 243
N L + +E F M G D + ++S G + GRW +LR MV
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLIS-----GLSNSGRWTDAARLLRDMVKRKID 251
Query: 244 -SCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSL 298
+ TAL+D + K G L AR +++ M +R NV T++++I G HG +A +
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F++M P+ VTY ++ + V++G + F EM Y G+ Y ++
Sbjct: 312 FDLMVSK--GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY-QGLVGDAFTYNTLIHG 368
Query: 359 YGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
Y +AG L A + M V+PD + + LL C ++ K+ K L++VE
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD-CLCNNG--------KIEKALVMVE 418
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 146/312 (46%), Gaps = 11/312 (3%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ + +N +I G + A+ VF M ++G++ + +T+ L+ + + ++
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV----SWNSVITACVE 187
D VK +D +V LI+ + + +L+AR ++ EM R+ V ++NS+I
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ L D F M G PD + +++ + + G + C++ +G+V
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 248 GTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
L+ Y ++G L A+ VF RM +++T++ ++ L +G E+AL + E +
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
++ ++ + +TY ++ + E + FR + G+KP + Y M+ R G
Sbjct: 422 KSEMDV--DIITYNIIIQGLCRTDKLKEAWCLFRSLTR-KGVKPDAIAYITMISGLCRKG 478
Query: 364 LLREAYEFIQSM 375
L REA + + M
Sbjct: 479 LQREADKLCRRM 490
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R +V P+ I + LI F + +EA ++++M R V PN T+ L+ +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV----SW 178
L + K + V G DV N LI + + K++ D K+F EM + V ++
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N++I + L + F +M G PD +V
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD--------------------------IVT 396
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEE 294
++L C +G + A ++ E ++K +++T++ +I GL + +E
Sbjct: 397 YNILLDCLCN---------NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
A LF ++ ++P+ + Y+ ++ G+ E + R M+
Sbjct: 448 AWCLFRSLTRK--GVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 167/404 (41%), Gaps = 53/404 (13%)
Query: 49 YVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPN 108
Y K L ++L TP+ +++ LI + +A+ V R M+E GVK N
Sbjct: 459 YTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 109 KLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINF--------------- 153
T+ ++ V D VK G+ DV + NN+I+
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
Query: 154 --------------------YGRCKKILDARKVFDEMPE----RTPVSWNSVITACVENL 189
Y + + + +VFD M T ++N +I VE
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR 638
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ VE +M +G +E + ++ A +G ++ G+ +
Sbjct: 639 QMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYE 698
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHGFAEEALSLFEMMSEN 305
AL+ KSG + A V + M RN+ ++ +I G A+ G EA L + M +
Sbjct: 699 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK- 757
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+ ++P+ TY + ACS AG ++ + EME + G+KP + Y ++ + RA L
Sbjct: 758 -EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKPNIKTYTTLIKGWARASLP 815
Query: 366 REA---YEFIQSMPVNPDPIVWR----TLLSACSVHDAHDRTGI 402
+A YE +++M + PD V+ +LLS S+ +A+ +G+
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGV 859
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFA-----EEALSLFEMMSEN 305
+V YG+ G + AR FERM R + S + L H +A +EALS M E
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLI-HAYAVGRDMDEALSCVRKMKE- 372
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+ I + VTY ++ S AG + +F E + +H + YG ++ + + +
Sbjct: 373 -EGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI-YGKIIYAHCQTCNM 430
Query: 366 REAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLV 422
A ++ M ++ ++ T++ ++ + D+ + ++ + G
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTM--------VADEKKGLVVFKRLKECGFTP 482
Query: 423 IVA------NLYAEAGMWERAANVRRVMRDGGMK 450
V NLY + G +A V RVM++ G+K
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK 516
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 143/311 (45%), Gaps = 24/311 (7%)
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
VF M G+KPN +++ L+ AV V D + G+ DV L+N YG
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 156 RCKKILDARKVFDEM--PERTP--VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
R ++ A++VF M R P V++N++I A N +L + VE F +M G +P+
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVL-----RGMVLSCQLGTALVDMYGKSGALGYARL 266
S+ +L+AC+ + V+ VL RG+ L+ + + Y + L A
Sbjct: 462 SVCTLLAACSR-----SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 267 VFERMEKRNV----LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCA 322
+++ M K+ V +T++ +I G + EA+S + M + +I Y VLCA
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED--LSIPLTKEVYSSVLCA 574
Query: 323 CSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN---P 379
S G V E F +M+ + G +P ++ Y +M+ Y + +A E M N P
Sbjct: 575 YSKQGQVTEAESIFNQMK-MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Query: 380 DPIVWRTLLSA 390
D I L+ A
Sbjct: 634 DSIACSALMRA 644
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 34/408 (8%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
+N++IR A + +A +F +M++ KP+ T+ L+ R + D +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVENLWLR 192
+ + NNLIN G +A +V +M + V+ N V++A
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLG---- 248
+ YF M+G+ PD T+ +++ ++LG S + +R C+
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA--LDLFNSMREKRAECRPDVVTF 323
Query: 249 TALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
T+++ +Y G + R VFE M K N+++++A++ A HG + ALS+ + +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
N I P+ V+Y +L + + + F M KP +V Y A++D YG G
Sbjct: 384 N--GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGF 440
Query: 365 LREAYEFIQSMP---VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPR-RGGN 420
L EA E + M + P+ + TLL+ACS KV + +L + RG N
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK--------KKVNVDTVLSAAQSRGIN 492
Query: 421 LVIVA-----NLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGGS 463
L A Y A E+A + + MR +K + + + GS
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 147/344 (42%), Gaps = 40/344 (11%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA------ 124
PS ++N LI +S + EA+ V +KM + GV P+ +T +L G
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 125 ---LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSV 181
L +G +V D F + +Y + L G+ + LD +F+ M E+ V
Sbjct: 270 YFELMKGAKVRPDTTTFNI--IIYCLSKL----GQSSQALD---LFNSMREKRAECRPDV 320
Query: 182 IT-ACVENLWLRDG-VE----YFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+T + +L+ G +E F M G +P+ S ++ A A G V
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGF 291
+ G++ T L++ YG+S G A+ VF M K NV+T++A+I +GF
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGM---VDEGYRYFREMEYVHGIKPL 348
EA+ +F M + D I+PN V+ +L ACS + VD + GI
Sbjct: 441 LAEAVEIFRQMEQ--DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS----RGINLN 494
Query: 349 MVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLS 389
Y + + Y A L +A QSM V D + + L+S
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 122/329 (37%), Gaps = 41/329 (12%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P +S+ L+ + S P +A VF MR+ KPN +T+ L+ L E ++
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+ G+ +V L+ R KK ++ V R ++NS I + +
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
L + + MR + D + +++S SC+
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISG------------------------SCR- 542
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
M A+ Y + + + +S+++ ++ G EA S+F M
Sbjct: 543 ------MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM--KMA 594
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
P+ + Y +L A + + + F EME +GI+P + A++ + + G
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEME-ANGIEPDSIACSALMRAFNKGGQPSN 653
Query: 368 AYEFIQSMPVNPDPI---VWRTLLSACSV 393
+ + M P V+ + SAC+
Sbjct: 654 VFVLMDLMREKEIPFTGAVFFEIFSACNT 682
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 57/359 (15%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ +++N LIR +A + M ER + PN +TF L+ L E +++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+ + +K +D D++ ++LIN + ++ +A+ +F+ M + V++N++I +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ +G+E F +M G +G V +++G+
Sbjct: 408 AKRVEEGMELFREMSQRGL---------------------VGNTVTYNTLIQGLF----- 441
Query: 248 GTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMS 303
++G A+ +F++M +++T+S ++ GL ++G E+AL +FE +
Sbjct: 442 ---------QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
++ + P+ TY ++ AG V++G+ F + + G+KP ++ Y M+ + R G
Sbjct: 493 KSK--MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVIIYTTMISGFCRKG 549
Query: 364 LLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
L EA + M + P+ + TL+ A R GDK L+ E R G
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRA--------RLRDGDKAASAELIKEMRSCG 600
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 148/347 (42%), Gaps = 51/347 (14%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
++V PS + +N L+ A + I + +M+ + + ++ L+ C S
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM--PERTP--VSWN 179
L V +K G + D+ ++L+N Y K+I +A + D+M E P V++N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++I + + V +M G +PD + G V+
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPD---------------LFTYG------TVVN 228
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEA 295
G+ K G + A + ++MEK +V+ ++ +I L + +A
Sbjct: 229 GLC--------------KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 296 LSLFEMMSENHDNIRPNYVTYLGVL-CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
L+LF M ++ IRPN VTY ++ C C++ G + R +M I P +V + A
Sbjct: 275 LNLFTEM--DNKGIRPNVVTYNSLIRCLCNY-GRWSDASRLLSDM-IERKINPNVVTFSA 330
Query: 355 MVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHD 398
++D + + G L EA + M ++PD + +L++ +HD D
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 41/266 (15%)
Query: 59 LTHARKL----VLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPF 114
L A KL + S P +++ LI GF D EA +F M + PN +T+
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 115 LLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM-PER 173
L+K + EG ++ + + GL + N LI + A+K+F +M +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 174 TP---VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGR 230
P ++++ ++ + L + F ++ S EPD + +M+ + G + G
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 231 WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHG 290
+ C + L+G+ K NV+ ++ MI G + G
Sbjct: 521 DLFCSLSLKGV-------------------------------KPNVIIYTTMISGFCRKG 549
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTY 316
EEA +LF M E D PN TY
Sbjct: 550 LKEEADALFREMKE--DGTLPNSGTY 573
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 164/356 (46%), Gaps = 23/356 (6%)
Query: 49 YVCSLSPSKNLTHARKLV-LHSATPSPISWNILIRGFATSDSPIEAIW-VFRKMRERGVK 106
+VC L K H L+ L TP IS++ ++ G+ ++ +W + M+ +G+K
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF-GELDKVWKLIEVMKRKGLK 313
Query: 107 PNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKV 166
PN + ++ L E ++ ++ ++ G+ D V LI+ + + I A K
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 167 FDEMPER--TP--VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
F EM R TP +++ ++I+ + + + + F +M G EPD + +++ +
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK----RNVLT 278
G++ VH ++ G + T L+D K G L A + M K N+ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 279 WSAMILGLAQHGFAEEALSL---FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
+++++ GL + G EEA+ L FE N D VTY ++ A +G +D+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT-----VTYTTLMDAYCKSGEMDKAQEI 548
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLL 388
+EM G++P +V + +++ + G+L + + + M + P+ + +L+
Sbjct: 549 LKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 126/315 (40%), Gaps = 50/315 (15%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
TP +++ +I GF +EA +F +M +G++P+ +TF L+ +++ +
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKK--ILDARKVFDEM----PERTPVSWNSVITA 184
VH ++ G +V LI+ G CK+ + A ++ EM + ++NS++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLID--GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
++ + + V+ + +G D +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTY------------------------------- 529
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFE 300
T L+D Y KSG + A+ + + M + ++T++ ++ G HG E+ L
Sbjct: 530 ----TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M I PN T+ ++ + +++M G+ P Y +V +
Sbjct: 586 WMLAK--GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTYENLVKGHC 642
Query: 361 RAGLLREAYEFIQSM 375
+A ++EA+ Q M
Sbjct: 643 KARNMKEAWFLFQEM 657
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 164/356 (46%), Gaps = 23/356 (6%)
Query: 49 YVCSLSPSKNLTHARKLV-LHSATPSPISWNILIRGFATSDSPIEAIW-VFRKMRERGVK 106
+VC L K H L+ L TP IS++ ++ G+ ++ +W + M+ +G+K
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF-GELDKVWKLIEVMKRKGLK 313
Query: 107 PNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKV 166
PN + ++ L E ++ ++ ++ G+ D V LI+ + + I A K
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 167 FDEMPER--TP--VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAE 222
F EM R TP +++ ++I+ + + + + F +M G EPD + +++ +
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 223 LGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK----RNVLT 278
G++ VH ++ G + T L+D K G L A + M K N+ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 279 WSAMILGLAQHGFAEEALSL---FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRY 335
+++++ GL + G EEA+ L FE N D VTY ++ A +G +D+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT-----VTYTTLMDAYCKSGEMDKAQEI 548
Query: 336 FREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLL 388
+EM G++P +V + +++ + G+L + + + M + P+ + +L+
Sbjct: 549 LKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 126/315 (40%), Gaps = 50/315 (15%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
TP +++ +I GF +EA +F +M +G++P+ +TF L+ +++ +
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKK--ILDARKVFDEM----PERTPVSWNSVITA 184
VH ++ G +V LI+ G CK+ + A ++ EM + ++NS++
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLID--GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
++ + + V+ + +G D +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTY------------------------------- 529
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFE 300
T L+D Y KSG + A+ + + M + ++T++ ++ G HG E+ L
Sbjct: 530 ----TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M I PN T+ ++ + +++M G+ P Y +V +
Sbjct: 586 WMLAK--GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTYENLVKGHC 642
Query: 361 RAGLLREAYEFIQSM 375
+A ++EA+ Q M
Sbjct: 643 KARNMKEAWFLFQEM 657
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 147/292 (50%), Gaps = 11/292 (3%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+A+ +F +M +GV+PN +T+ L+ C + ++ +D ++ ++ +V N LI
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 152 NFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLWLRDGVEYFLKMRGSGFE 207
+ + + K+++A K++DEM +R+ +++S+I + L + F M
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 208 PDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
P+ + +++ + + G + ++ RG+V + T L+ + ++ A++V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 268 FERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCAC 323
F++M N++T++ ++ GL ++G E+A+ +FE + + + P TY ++
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK--MEPTIYTYNIMIEGM 515
Query: 324 SHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
AG V++G+ F + + G+KP ++ Y M+ + R GL EA + M
Sbjct: 516 CKAGKVEDGWDLFCSLS-LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 138/340 (40%), Gaps = 51/340 (15%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS +N L+ A I + KM+ G+ N T+ L+ C S + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
+K G + + ++L+N Y K+I DA + D+M E T + L+L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 192 R----DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ V +M G +P+ V VV+ G+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPN---------------------LVTYGVVVNGLC----- 236
Query: 248 GTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
K G + A + +ME + NV+ +S +I L ++ ++AL+LF M
Sbjct: 237 ---------KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 304 ENHDNIRPNYVTYLGVL-CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
+ +RPN +TY ++ C C++ D R +M I P +V + A++D + +
Sbjct: 288 --NKGVRPNVITYSSLISCLCNYERWSDAS-RLLSDM-IERKINPNVVTFNALIDAFVKE 343
Query: 363 GLLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDR 399
G L EA + M ++PD + +L++ +HD D
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 115/279 (41%), Gaps = 37/279 (13%)
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
++ P+ +++N LI F +EA ++ +M +R + P+ T+ L+ +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
L E K + + +V N LIN + + K+I + ++F EM +R V T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
+ F + R + D MV Q+V G+ +
Sbjct: 441 LIHG---------FFQAR----DCDNAQMVFK------------------QMVSDGVHPN 469
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFE 300
L+D K+G L A +VFE +++ + T++ MI G+ + G E+ LF
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 301 MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
+S ++P+ + Y ++ G+ +E FR+M
Sbjct: 530 SLSLK--GVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 101/246 (41%), Gaps = 35/246 (14%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
+++ S P +++ LI GF D EA +F M + PN +T+ L+
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWN 179
+ EG ++ + + GL + LI+ + + + +A+ VF +M +++N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
+++ +N L + F ++ S EP + +M+ + G + G + C + L+
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ K +V+ ++ MI G + G EEA +LF
Sbjct: 535 GV-------------------------------KPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 300 EMMSEN 305
M E+
Sbjct: 564 RKMRED 569
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 160/357 (44%), Gaps = 58/357 (16%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ +N +I G +A +F KM +G+KP+ T+ L+ C + ++ +D
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT-----PVSWNSVITACVENL 189
++ ++ D+ N LI+ + + K+++A K++DEM + V++N++I +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ +G+E F +M RG+V + T
Sbjct: 371 RVEEGMEVFREMSQ-----------------------------------RGLVGNTVTYT 395
Query: 250 ALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
L+ + ++ A++VF++M +++T++ ++ GL +G E AL +FE M +
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+++ + VTY ++ A AG V++G+ F + + G+KP +V Y M+ + R GL
Sbjct: 456 --DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 366 REAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
EA M + P+ + TL+ A R GD+ L+ E R G
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRA--------RLRDGDEAASAELIKEMRSCG 561
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 172/416 (41%), Gaps = 32/416 (7%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELV-YVCSLSP-SKNLTHA 62
S+ ++ LS + D + + Q G HN Y S + Y C S S L
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
K++ PS ++ N L+ GF + EA+ + +M E G +P+ +TF L+
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILD--ARKVFDEMP----ERTPV 176
+ E + V G D+ +IN G CK+ A + ++M E V
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVIN--GLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+N++I + + D + F KM G +PD + ++S + GRW
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC-----NYGRWSDASR 306
Query: 237 VLRGMVL-----SCQLGTALVDMYGKSGALGYARLVFERMEKR-----NVLTWSAMILGL 286
+L M+ AL+D + K G L A +++ M K +V+ ++ +I G
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 287 AQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIK 346
++ EE + +F MS+ + N VTY ++ A D F++M G+
Sbjct: 367 CKYKRVEEGMEVFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVH 423
Query: 347 PLMVHYGAMVDIYGRAGLLREA---YEFIQSMPVNPDPIVWRTLLSA-CSVHDAHD 398
P ++ Y ++D G + A +E++Q + D + + T++ A C D
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P +++N LI+GF E + VFR+M +RG+ N +T+ L+ + V
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
V G+ D+ N L++ + A VF+ M +R V++ ++I A +
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELG 224
+ DG + F + G +P+ + M+S G
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 123/238 (51%), Gaps = 18/238 (7%)
Query: 150 LINFYGRCKKILDARKVFDEMPE----RTPVSWNSVITACV--ENLWLRDGVEYFLKMRG 203
+IN YGR +A+KVFDEMPE RT +S+N+++ ACV + L +G+ F ++ G
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGI--FKELPG 169
Query: 204 S-GFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS-CQLGTALVDMYGK---- 257
EPD S ++ G + + ++ +G+ L + Y K
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 258 SGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYL 317
G +AR+V E+ KR++ +++A +LGLA +EE +SLF+ + N ++P+ T+
Sbjct: 230 EGEQIWARMV-EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE--LKPDVFTFT 286
Query: 318 GVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
++ G +DE +++E+E +G +PL + +++ +AG L AYE + +
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEK-NGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 145/326 (44%), Gaps = 42/326 (12%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIW-VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+PS +++N +I A E + +F +MR G++P+ +T+ LL CA+ E +
Sbjct: 208 SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENL 189
V G+ D+ ++L+ +G+ +++ KV D + E
Sbjct: 268 MVFRTMNDGGIVPDLTTYSHLVETFGKLRRL---EKVCDLLGE----------------- 307
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
M G PD TS ++L A A+ G + V Q+ G + +
Sbjct: 308 -----------MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHGFAEEALSLFEMMSEN 305
L++++G+SG R +F M+ N T++ +I + G+ +E ++LF M E
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE- 415
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+NI P+ TY G++ AC G+ ++ + + M + I P Y +++ +G+A L
Sbjct: 416 -ENIEPDMETYEGIIFACGKGGLHEDARKILQYMT-ANDIVPSSKAYTGVIEAFGQAALY 473
Query: 366 RE---AYEFIQSMPVNPDPIVWRTLL 388
E A+ + + NP + +LL
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLL 499
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 154/367 (41%), Gaps = 28/367 (7%)
Query: 50 VCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKM-RERGVKPN 108
+ SL P ++ AR L + S + ++ + FA ++ +F+ M R+ KPN
Sbjct: 83 LSSLPPRGSI--ARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPN 140
Query: 109 KLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFD 168
+ + ++ L + +V + G+ V+ LIN YGR + + ++ D
Sbjct: 141 EHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLD 200
Query: 169 EMPER----TPVSWNSVITACVENLWLRDGVEY------FLKMRGSGFEPDETSMVLMLS 218
M + +++N+VI AC R G+++ F +MR G +PD + +LS
Sbjct: 201 RMKNEKISPSILTYNTVINACA-----RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 219 ACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK----R 274
ACA G V + G+V + LV+ +GK L + M
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 275 NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYR 334
++ +++ ++ A+ G +EA+ +F M PN TY +L +G D+ +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAA--GCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 335 YFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSAC 391
F EM+ + P Y +++++G G +E M + PD + ++ AC
Sbjct: 374 LFLEMKSSN-TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 392 SVHDAHD 398
H+
Sbjct: 433 GKGGLHE 439
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 11/315 (3%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P S+N+L+ +A S S EA+ VF +M+ G PN T+ LL + +Q+
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP----VSWNSVITACVE 187
+ D D N LI +G + +F +M E ++ +I AC +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
D + M + P + ++ A + + G S +
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 248 GTALVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+L+ + + G + + + R+ RN T++A I Q G EEA+ + M
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
++ P+ T VL S A +VDE F EM+ I P ++ Y M+ +YG+
Sbjct: 555 KSR--CDPDERTLEAVLSVYSFARLVDECREQFEEMK-ASDILPSIMCYCMMLAVYGKTE 611
Query: 364 LLREAYEFIQSMPVN 378
+ E ++ M N
Sbjct: 612 RWDDVNELLEEMLSN 626
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 153/333 (45%), Gaps = 24/333 (7%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS + +N L+ I + +KM G++ + TF ++ C + +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE----RTPVSWNSVITACVE 187
+K G + D +L+N + R ++ DA + D+M E V++N++I + +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV---LS 244
+ D ++F ++ G P+ + +++ G + RW +L M+ ++
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVN-----GLCNSSRWSDAARLLSDMIKKKIT 257
Query: 245 CQLGT--ALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSL 298
+ T AL+D + K+G + A+ +FE M + +++T+S++I GL H +EA +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 299 FEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDI 358
F++M + V+Y ++ A V++G + FREM G+ V Y ++
Sbjct: 318 FDLMVSK--GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQG 374
Query: 359 YGRAGLLREAYEFIQSMP---VNPDPIVWRTLL 388
+ +AG + +A EF M ++PD + LL
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 154/328 (46%), Gaps = 11/328 (3%)
Query: 56 SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFL 115
S ++ K+V P +++N +I + +A F+++ +G++PN +T+ L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT- 174
+ S + ++ +D +K + +V + L++ + + K+L+A+++F+EM +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 175 ---PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
V+++S+I + + + + F M G D S +++ + + G
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLA 287
+ ++ RG+V + L+ + ++G + A+ F +M+ ++ T++ ++ GL
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP 347
+G E+AL +FE M + ++ + VTY V+ G V+E + F + + G+KP
Sbjct: 412 DNGELEKALVIFEDMQKREMDL--DIVTYTTVIRGMCKTGKVEEAWSLFCSLS-LKGLKP 468
Query: 348 LMVHYGAMVDIYGRAGLLREAYEFIQSM 375
+V Y M+ GLL E M
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 45/284 (15%)
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
++ TP+ I+++ L+ F + +EA +F +M + P+ +T+ L+ +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNS 180
+ E Q+ V G +DV N LIN + + K++ D K+F EM +R V++N+
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRG 240
+I + + E+F +M G PD W + ++L G
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPD--------------------IWTY-NILLGG 409
Query: 241 MVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEAL 296
+ + +L ALV +FE M+KR +++T++ +I G+ + G EEA
Sbjct: 410 LCDNGELEKALV--------------IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 297 SLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREME 340
SLF +S ++P+ VTY ++ G++ E + +M+
Sbjct: 456 SLFCSLS--LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
++ VE R G+ D + + C + L + VH + + +
Sbjct: 162 VKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNS 221
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+++MY G++ A VF M +RN+ TW +I A++G E+A+ F + + +
Sbjct: 222 IIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN--K 279
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
P+ + + AC G ++EG +F M +GI P M HY ++V + G L EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 371 FIQSMPVNPDPIVWRTLLSACSVH 394
F++SM N D +W TL++ VH
Sbjct: 340 FVESMEPNVD--LWETLMNLSRVH 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+A+ + + R G + ++ + C AL+E K VH SD+ N++I
Sbjct: 164 KAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSII 223
Query: 152 NFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
Y C + DA VF+ MPER +W VI +N D ++ F + + G +PD
Sbjct: 224 EMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGE 283
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLR--GMVLSCQLGTALVDMYGKSGALGYARLVFE 269
+ AC LG ++ G +H + + + G++ + +LV M + G L A E
Sbjct: 284 MFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE 342
Query: 270 RMEKRNVLTWSAMI 283
ME NV W ++
Sbjct: 343 SMEP-NVDLWETLM 355
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 157/376 (41%), Gaps = 62/376 (16%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLI 151
+A+ +F +M+ G P T+ L+K + E + D ++ GL DV NNL+
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 152 NFYGRCKKILDARKVFDEMP----ERTPVSWNSVITACVEN-LWLRDGVEYFLKMRGSGF 206
N G+ ++ + VF EM T VS+N+VI A E+ + + +F KM+
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSV 405
Query: 207 EPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM----VLSCQLG-TALVDMYGKSGAL 261
P E + +++ GY R ++L M C +L++ GK+
Sbjct: 406 SPSEFTYSILID-----GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 262 GYARLVFERMEKR--NVLT--WSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYL 317
A +F+ +++ NV + ++ MI + G EA+ LF M P+ Y
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG--PDVYAYN 518
Query: 318 GVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP- 376
++ AGM++E R+ME +G + + + +++ + R G+ R A E +++
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEE-NGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 377 --VNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGMW 434
+ PD + + TLL +A AGM+
Sbjct: 578 SGIKPDGVTYNTLLGC-------------------------------------FAHAGMF 600
Query: 435 ERAANVRRVMRDGGMK 450
E AA + R M+D G +
Sbjct: 601 EEAARMMREMKDKGFE 616
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 167/356 (46%), Gaps = 22/356 (6%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+ +N +I G +A+ +F +M +G++P+ T+ L+ C + ++ +D
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLW 190
++ ++ +V + LI+ + + K+++A K++DEM +R+ +++S+I +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
L + F M P+ + ++ + + G + ++ RG+V + T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 251 LVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L+ + ++ A++VF++M N+LT++ ++ GL ++G +A+ +FE + +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS- 497
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
+ P+ TY ++ AG V++G+ F + + G+ P ++ Y M+ + R G
Sbjct: 498 -TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS-LKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 367 EAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
EA ++ M + P+ + TL+ A R GD+ L+ E R G
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRA--------RLRDGDREASAELIKEMRSCG 603
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 41/335 (12%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS + +N L+ A + I + +M+ G+ + T+ + C S L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
A +K G + D+ ++L+N Y K+I DA + D+M E
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM------------------ 182
Query: 192 RDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTAL 251
G++PD + ++ S + Q+V RG +
Sbjct: 183 -------------GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 252 VDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
V+ K G + A + ++MEK +V+ ++ +I GL ++ ++AL+LF M ++
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM--DNK 287
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
IRP+ TY ++ + G + R +M I P +V + A++D + + G L E
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 368 AYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDR 399
A + M ++PD + +L++ +HD D
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 37/280 (13%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
+++ S P +++ LI GF D EA +F M + PN +T+ L+K
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE----RTPVSWN 179
+ EG ++ + + GL + LI+ + + + +A+ VF +M +++N
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++ +N L + F ++ S EPD + +M+ + G + G + C + L+
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 240 GMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLF 299
G+ NV+ ++ MI G + G EEA SL
Sbjct: 533 GV-------------------------------SPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREM 339
+ M E D PN TY ++ A G + +EM
Sbjct: 562 KKMKE--DGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 169/409 (41%), Gaps = 48/409 (11%)
Query: 66 VLHSATP-SPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
+L S P +++N +I T EA + +KM E+G+ P+ T+ LL A
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
+ + + K GL D +++ + K + + V EM +R + +
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM-DRNSIRIDEHSVP 449
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
+ +++ +G+ K F+ D L+A ++ Y G WV + V
Sbjct: 450 VIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV-YAEKGLWVEAETVF------ 502
Query: 245 CQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSE 304
YGK G ++ +VL ++ MI + E+ALSLF+ M
Sbjct: 503 ----------YGKRNMSG---------QRNDVLEYNVMIKAYGKAKLHEKALSLFKGM-- 541
Query: 305 NHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGL 364
+ P+ TY + + +VDE R EM G KP Y AM+ Y R GL
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM-LDSGCKPGCKTYAAMIASYVRLGL 600
Query: 365 LREA---YEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNL 421
L +A YE ++ V P+ +V+ +L++ + + + + ++ ++ E N
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFA-----ESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 422 VIVANL---YAEAGMWERAANVRRVMRD--GGMKKMAGES----CVDLG 461
+++ +L Y++ G E A V M+D GG A S C DLG
Sbjct: 656 IVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLG 704
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 183/433 (42%), Gaps = 39/433 (9%)
Query: 40 NTYLLSELVYVCS----LSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIW 95
+T + +++ C LS +++L +K+ +P ++NIL+ A + A+
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLL--KKMEEKGISPDTKTYNILLSLHADAGDIEAALE 396
Query: 96 VFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYG 155
+RK+R+ G+ P+ +T +L + E + V A+ + + D + ++ Y
Sbjct: 397 YYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYV 456
Query: 156 RCKKILDARKVFDEMPER---TPVSWNSVITACVEN-LWLRDGVEYFLKMRGSGFEPDET 211
++ A+ +F+ + + +VI E LW+ ++ K SG D
Sbjct: 457 NEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVL 516
Query: 212 SMVLMLSACAELGY----LSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLV 267
+M+ A + LSL + + Q C + + G R++
Sbjct: 517 EYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPD---ECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 268 FERME---KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACS 324
E ++ K T++AMI + G +A+ L+E M + ++PN V Y ++ +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT--GVKPNEVVYGSLINGFA 631
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQSMPVNPDP 381
+GMV+E +YFR ME HG++ + +++ Y + G L EA Y+ ++ PD
Sbjct: 632 ESGMVEEAIQYFRMMEE-HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 382 IVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLVIVA-----NLYAEAGMWER 436
++LS C+ +G E + R G +++ LY GM +
Sbjct: 691 AASNSMLSLCA--------DLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDE 742
Query: 437 AANVRRVMRDGGM 449
A V MR+ G+
Sbjct: 743 AIEVAEEMRESGL 755
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 15/348 (4%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ + + LI GFA S EAI FR M E GV+ N + L+K + L E ++V
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTP---VSWNSVITACVEN 188
+ DV N++++ + +A +F+ + E+ +S+ +++
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGM 737
Query: 189 LWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS-LGRWVHCQVVLRGMVLSCQL 247
L + +E +MR SG D TS +++ A G LS H +V R ++L
Sbjct: 738 GMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGT 797
Query: 248 GTALVDMYGKSGALGYA--RLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
L + K G A +L E + + T + + G AL + ++
Sbjct: 798 FKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSG 857
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
I + Y V+ S +G +D + + M+ G++P +V +V IYG+AG++
Sbjct: 858 E--IPREHFAYNAVIYTYSASGDIDMALKAYMRMQE-KGLEPDIVTQAYLVGIYGKAGMV 914
Query: 366 REAYEFIQSMPVNPDPIVWRTLLSACSVHDAH---DRTGIGDKVRKEL 410
E + + S + ++L A V DA+ +R + D V+KE+
Sbjct: 915 -EGVKRVHSRLTFGELEPSQSLFKA--VRDAYVSANRQDLADVVKKEM 959
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 153/409 (37%), Gaps = 82/409 (20%)
Query: 68 HSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE 127
S P+ I +NI++R + E + +M GV P T+ L+ ++E
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 128 --------GKQVH-ADAVKFGLDSDVYVGNNLIN-----FYGRCKKILDAR-KVFDEMPE 172
G+++H D V V+ + + F G C +D D+ P+
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPK 258
Query: 173 ----RTPVSWNSVITACVENLWLRDGVEYFLKM-RGSGFEPDETSMVLMLSACAELGYLS 227
++PV+ ++ + + R+ +E L GS P
Sbjct: 259 NGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSP------------------- 299
Query: 228 LGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMI 283
R L+ T L+D+YGK+G L A +F M K V +T++ MI
Sbjct: 300 -----------RKPRLTSTFNT-LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMI 347
Query: 284 LGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVH 343
HG EA SL + M E I P+ TY +L + AG ++ Y+R++ V
Sbjct: 348 HTCGTHGHLSEAESLLKKMEEK--GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV- 404
Query: 344 GIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIG 403
G+ P V + A++ I + ++ E I M N I D H I
Sbjct: 405 GLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI------------DEHSVPVIM 452
Query: 404 DKVRKELLLVEPR------------RGGNLVIVANLYAEAGMWERAANV 440
E L+V+ + L V ++YAE G+W A V
Sbjct: 453 QMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETV 501
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
E L +F ++H + PN + Y VL A AG DE + EM + +G+ P Y
Sbjct: 126 ERVLRVFRFF-QSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAH-NGVLPTNNTY 183
Query: 353 GAMVDIYGRAGLLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDR 399
G +VD+YG+AGL++EA +I+ M PD + T++ DR
Sbjct: 184 GMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDR 233
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 184 ACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL 243
A + + +R+ +E + G+ D ++ + C E+ L R VH + L
Sbjct: 86 ALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PL 141
Query: 244 SCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMS 303
+ +++MY + A VF M KRN TW MI LA++G E A+ +F
Sbjct: 142 DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
E + +P+ + V AC G ++EG +F M +G+ M Y ++++ G
Sbjct: 202 EEGN--KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACG 259
Query: 364 LLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVR---KELLLVEPRRGGN 420
L EA +F++ M V P +W TL++ C V + +GD+ K+L + N
Sbjct: 260 HLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE---LGDRFAELIKKLDASRMSKESN 316
Query: 421 LVIVANLYAEAGMWERAANVR--RVMRDGGMKKM 452
+VA +++ M E+ +R +++RD K+M
Sbjct: 317 AGLVAAKASDSAM-EKLKELRYCQMIRDDPKKRM 349
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 19/261 (7%)
Query: 92 EAIWVFRKMRERGVKPNKLTFPFLL---KCCAVGSALREGKQVHADAVKFGLDSDVYVGN 148
EA+ V + ++G + FP LL K C AL E + VH D + LD+ Y +
Sbjct: 95 EALEVIDILEDKGYI---VDFPRLLGLAKLCGEVEALEEARVVH-DCIT-PLDARSY--H 147
Query: 149 NLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEP 208
+I Y C+ DA VF+EMP+R +W ++I +N ++ F + G +P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 209 DETSMVLMLSACAELGYLSLGRWVHCQVVLR--GMVLSCQLGTALVDMYGKSGALGYARL 266
D+ + AC +G ++ G +H + + R GMVLS + +++M G L A
Sbjct: 208 DKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 267 VFERME-KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSH 325
ERM + +V W ++ G+ E E++ + D R + + G++ A +
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELI-KKLDASRMSKESNAGLVAAKAS 325
Query: 326 AGMVDEGYRYFREMEYVHGIK 346
D +E+ Y I+
Sbjct: 326 ----DSAMEKLKELRYCQMIR 342
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 166/381 (43%), Gaps = 32/381 (8%)
Query: 31 QFHIHGHYHNTYLLSELVYVCSLSPSKNLTHA----RKLVLHSATPSPISWNILIRGFAT 86
Q G H+ Y LS + + + L++A K++ P + +N L+ G
Sbjct: 113 QMESKGIAHSIYTLS--IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCL 170
Query: 87 SDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYV 146
EA+ + +M E G KP +T L+ + + + + V+ G +
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 147 GNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLWLRDGVEYFLKMR 202
++N + + A ++ +M ER V ++ +I ++ L + F +M
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 203 GSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV---LSCQLGT--ALVDMYGK 257
GF+ D + ++ G+ + GRW +LR M+ +S + T L+D + K
Sbjct: 291 IKGFKADIITYNTLIG-----GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 258 SGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMM-SENHDNIRPN 312
G L A + + M +R N +T++++I G + EEA+ + ++M S+ D P+
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD---PD 402
Query: 313 YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFI 372
+T+ ++ A +D+G FREM + G+ V Y +V + ++G L A +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 373 QSM---PVNPDPIVWRTLLSA 390
Q M V PD + ++ LL
Sbjct: 462 QEMVSRRVRPDIVSYKILLDG 482
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 153/350 (43%), Gaps = 19/350 (5%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R ++ P+ I +N L A + + + ++M +G+ + T ++ C
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCK--KILDARKVFDEMPER----TPV 176
L +K G + D + N L+N G C ++ +A ++ D M E T +
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLN--GLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 177 SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQV 236
+ N+++ N + D V +M +GF+P+E + +L+ + G +L + ++
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 237 VLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFA 292
R + L + ++D K G+L A +F ME K +++T++ +I G G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
++ L M + I PN VT+ ++ + G + E + +EM GI P + Y
Sbjct: 315 DDGAKLLRDMIKRK--ISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITY 371
Query: 353 GAMVDIYGRAGLLREAYEFIQ---SMPVNPDPIVWRTLLSA-CSVHDAHD 398
+++D + + L EA + + S +PD + + L++ C + D
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 137/323 (42%), Gaps = 41/323 (12%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
I++N LI GF + + + R M +R + PN +TF L+ LRE Q+ +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG 194
++ G+ + N+LI+ + C EN L +
Sbjct: 359 MMQRGIAPNTITYNSLIDGF------------------------------CKEN-RLEEA 387
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
++ M G +PD + ++++ + + G + ++ LRG++ + LV
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 255 YGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+ +SG L A+ +F+ M R +++++ ++ GL +G E+AL +F + ++ +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK--ME 505
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
+ Y+ ++ +A VD+ + F + + G+K Y M+ R L +A
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLP-LKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 371 FIQSMPVN---PDPIVWRTLLSA 390
+ M PD + + L+ A
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRA 587
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 132/314 (42%), Gaps = 46/314 (14%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R ++ +P+ +++++LI F EA + ++M +RG+ PN +T+ L+
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ L E Q+ + G D D+ N LIN Y + +I D ++F EM R V++
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLS-----LGR--- 230
N+++ ++ L + F +M PD S ++L + G L G+
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 231 --------------------------W-VHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
W + C + L+G+ L + ++ + +L
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 264 ARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGV 319
A ++F +M + + LT++ +I H ++A + E++ E + P V+ + +
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRA---HLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 320 LCACSHAGMVDEGY 333
+ +G +D+ +
Sbjct: 619 VINMLSSGELDKSF 632
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 154/346 (44%), Gaps = 23/346 (6%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
L RK ++H P+ +++N LI GF+ + A + +M G+ PN +TF L+
Sbjct: 326 LRDMRKRMIH---PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Query: 119 CAVGSALREG-KQVHADAVKFGLDSDVYVGNNLINFYGRCKKI-LDARKVFDEMPERTPV 176
+E K + K S+V G + G CK D + F +R V
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYG---VLLDGLCKNAEFDLARGFYMRMKRNGV 439
Query: 177 -----SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
++ +I +N +L + V +M G +PD + +++ ++G +
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM----EKRNVLTWSAMILGLA 287
+ C++ G+ + + + L+ + G L A ++E M R+ T++ ++ L
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP 347
+ G EA M+ D I PN V++ ++ ++G + + F EM V G P
Sbjct: 560 KAGKVAEAEEFMRCMTS--DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV-GHHP 616
Query: 348 LMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSA 390
YG+++ + G LREA +F++S+ P D +++ TLL+A
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 149/351 (42%), Gaps = 24/351 (6%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ +++N ++ + AI + M+ +GV + T+ L+ + + +G +
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPE--RTP--VSWNSVITACVE 187
D K + + N LIN + K+L A ++ +EM +P V++N++I +
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
++ ++ F M G P E S ++L + L R + ++ G+ +
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 248 GTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMS 303
T ++D K+G L A ++ M K +++T+SA+I G + G + A + +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 304 ENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG 363
+ PN + Y ++ C G + E R + M + G + +V +AG
Sbjct: 506 RV--GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM-ILEGHTRDHFTFNVLVTSLCKAG 562
Query: 364 LLREAYEFIQSMPVN---PDPIVWRTL----------LSACSVHDAHDRTG 401
+ EA EF++ M + P+ + + L L A SV D + G
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 133/321 (41%), Gaps = 11/321 (3%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
++++ P ++NILI S ++ ++ +KM + G P +T+ +L
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ ++ G+D+DV N LI+ R +I + +M +R V++
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N++I + + +M G P+ + ++ G + +
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHGFAEE 294
+G+ S L+D K+ AR + RM++ V +T++ MI GL ++GF +E
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 295 ALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGA 354
A+ L MS+ D I P+ VTY ++ G + Y G+ P + Y
Sbjct: 462 AVVLLNEMSK--DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-YRVGLSPNGIIYST 518
Query: 355 MVDIYGRAGLLREAYEFIQSM 375
++ R G L+EA ++M
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAM 539
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 22/318 (6%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL-KCCAVGSALREGKQ 130
P ++++ LI GF A + ++ G+ PN + + L+ CC +G L+E +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG-CLKEAIR 534
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLW 190
++ + G D + N L+ + K+ +A + M + N+V C+ N +
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS-DGILPNTVSFDCLINGY 593
Query: 191 LRDG-----VEYFLKMRGSGFEPDETSMVLMLSACAELGYL----SLGRWVHCQVVLRGM 241
G F +M G P + +L + G+L + +H
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRNVL----TWSAMILGLAQHGFAEEALS 297
V+ L TA+ KSG L A +F M +R++L T++++I GL + G A+
Sbjct: 654 VMYNTLLTAMC----KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI- 708
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
LF +E N+ PN V Y + AG G YFRE G P +V AM+D
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHTPDIVTTNAMID 767
Query: 358 IYGRAGLLREAYEFIQSM 375
Y R G + + + + M
Sbjct: 768 GYSRMGKIEKTNDLLPEM 785
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 155/395 (39%), Gaps = 58/395 (14%)
Query: 15 LLNLCR--SIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHA----RKLVLH 68
+ N CR + + +I + GH + + + V V SL + + A R +
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN--VLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 69 SATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREG 128
P+ +S++ LI G+ S ++A VF +M + G P T+ LLK G LRE
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 129 ----KQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITA 184
K +H AV +D+ +Y N L+ + + A +F EM +R+ +
Sbjct: 638 EKFLKSLH--AVPAAVDTVMY--NTLLTAMCKSGNLAKAVSLFGEMVQRSIL-------- 685
Query: 185 CVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLS 244
PD + ++S G + + RG VL
Sbjct: 686 -----------------------PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
Query: 245 CQ-LGTALVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGFAEEALSLF 299
+ + T VD K+G E+M+ +++T +AMI G ++ G E+ L
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Query: 300 EMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
M + N PN TY +L S V + +R + ++GI P + ++V
Sbjct: 783 PEMG--NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI-ILNGILPDKLTCHSLVLGI 839
Query: 360 GRAGLLREAYEFIQSM---PVNPDPIVWRTLLSAC 391
+ +L + +++ V D + L+S C
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 166/392 (42%), Gaps = 33/392 (8%)
Query: 37 HYHNTYLLSE---LVYVCSLSPSKNLTHARK----LVLHSATPSPISWNILIRGFATSDS 89
Y N + SE L+ + + N A + L +TP+ IS+ L+ +
Sbjct: 130 RYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGK 189
Query: 90 PIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA---DAVKFGLDSDVYV 146
A +FR+M+ G +P+ +T+ +LK G +E ++V D K L D +
Sbjct: 190 CNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKM 249
Query: 147 GNNLINFYGRCKKILDARKVFDEM-----PERTPVSWNSVITACVENLWLRDGVEYFLKM 201
+ +I Y + ARKVF M P+ T V++NS+++ ++ + + +M
Sbjct: 250 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQST-VTYNSLMSFETS---YKEVSKIYDQM 305
Query: 202 RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ S +PD S L++ A V +++ G+ + + L+D + SG +
Sbjct: 306 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 365
Query: 262 GYARLVFERMEKRNVL----TWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYL 317
A+ VF+ M + + +++ M+ E A F+ + D PN VTY
Sbjct: 366 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI--KVDGFEPNIVTYG 423
Query: 318 GVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQS 374
++ + A V++ + +M + GIK ++D GR A Y+ ++S
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMR-LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
Query: 375 MPVNPDPIVWRTLLSACSVHD----AHDRTGI 402
V PD LLS S D A + TGI
Sbjct: 483 CGVPPDQKAKNVLLSLASTQDELEEAKELTGI 514
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM----PERTPVSWNSVITACVENLWLR 192
K G +V L+ YGR K +A +F M PE + +++ ++ VE +
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 226
Query: 193 DGVEYF---LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ E F L + S +PD+ +M+ + G R V +V +G+ S
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 250 ALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
+L+ + ++++M++ +V++++ +I + EEALS+FE M +
Sbjct: 287 SLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+RP + Y +L A + +GMV++ F+ M I P + Y M+ Y A +
Sbjct: 344 --GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPDLWSYTTMLSAYVNASDM 400
Query: 366 REAYEFIQSMPVN---PDPIVWRTLLSA-CSVHDAHDRTGIGDKVR 407
A +F + + V+ P+ + + TL+ +D + +K+R
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 166/392 (42%), Gaps = 33/392 (8%)
Query: 37 HYHNTYLLSE---LVYVCSLSPSKNLTHARK----LVLHSATPSPISWNILIRGFATSDS 89
Y N + SE L+ + + N A + L +TP+ IS+ L+ +
Sbjct: 137 RYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGK 196
Query: 90 PIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHA---DAVKFGLDSDVYV 146
A +FR+M+ G +P+ +T+ +LK G +E ++V D K L D +
Sbjct: 197 CNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKM 256
Query: 147 GNNLINFYGRCKKILDARKVFDEM-----PERTPVSWNSVITACVENLWLRDGVEYFLKM 201
+ +I Y + ARKVF M P+ T V++NS+++ ++ + + +M
Sbjct: 257 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQST-VTYNSLMSFETS---YKEVSKIYDQM 312
Query: 202 RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ S +PD S L++ A V +++ G+ + + L+D + SG +
Sbjct: 313 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 372
Query: 262 GYARLVFERMEKRNVL----TWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYL 317
A+ VF+ M + + +++ M+ E A F+ + D PN VTY
Sbjct: 373 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI--KVDGFEPNIVTYG 430
Query: 318 GVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA---YEFIQS 374
++ + A V++ + +M + GIK ++D GR A Y+ ++S
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMR-LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
Query: 375 MPVNPDPIVWRTLLSACSVHD----AHDRTGI 402
V PD LLS S D A + TGI
Sbjct: 490 CGVPPDQKAKNVLLSLASTQDELEEAKELTGI 521
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM----PERTPVSWNSVITACVENLWLR 192
K G +V L+ YGR K +A +F M PE + +++ ++ VE +
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 193 DGVEYF---LKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ E F L + S +PD+ +M+ + G R V +V +G+ S
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 250 ALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSEN 305
+L+ + ++++M++ +V++++ +I + EEALS+FE M +
Sbjct: 294 SLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
+RP + Y +L A + +GMV++ F+ M I P + Y M+ Y A +
Sbjct: 351 --GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDM 407
Query: 366 REAYEFIQSMPVN---PDPIVWRTLLSA-CSVHDAHDRTGIGDKVR 407
A +F + + V+ P+ + + TL+ +D + +K+R
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 155/332 (46%), Gaps = 20/332 (6%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC-CAVGSALREGKQVHADA 135
+NIL+ F + +A VF ++ +R ++P ++F L+ C VG+ L EG ++
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN-LDEGFRLKHQM 301
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDG- 194
K DV+ + LIN + K+ A +FDEM +R + + + T + R+G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG-HSRNGE 360
Query: 195 ----VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
E + KM G +PD +++ + G L R + ++ RG+ T
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 251 LVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHGFAEEA-LSLFEMMSEN 305
L+D + + G + A + + M++ + + +SA++ G+ + G +A +L EM+
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA- 479
Query: 306 HDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLL 365
I+P+ VTY ++ A G G++ +EM+ G P +V Y +++ + G +
Sbjct: 480 --GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS-DGHVPSVVTYNVLLNGLCKLGQM 536
Query: 366 REAYEFIQSM---PVNPDPIVWRTLLSACSVH 394
+ A + +M V PD I + TLL H
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 130/300 (43%), Gaps = 53/300 (17%)
Query: 139 GLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITA---------- 184
G +VYV N L+N + + I DA+KVFDE+ +R T VS+N++I
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 185 --------------------------CVENLWLRDGVE-YFLKMRGSGFEPDETSMVLML 217
C EN DG F +M G P++ ++
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKM--DGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 218 SACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNV- 276
+ G + L + + +++ +G+ L LV+ + K+G L AR + + M +R +
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 277 ---LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGY 333
+T++ +I G + G E AL + + M +N I + V + ++C G V +
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQN--GIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 334 RYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN---PDPIVWRTLLSA 390
R REM GIKP V Y M+D + + G + ++ ++ M + P + + LL+
Sbjct: 471 RALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 233 HCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRN----VLTWSAMILGLAQ 288
+ +++ G L+ + L++ + K G + A+ VF+ + KR+ V++++ +I G +
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 289 HGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPL 348
G +E L M ++ RP+ TY ++ A +D + F EM G+ P
Sbjct: 288 VGNLDEGFRLKHQMEKSR--TRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPN 344
Query: 349 MVHYGAMVDIYGRAG---LLREAYEFIQSMPVNPDPIVWRT----------LLSACSVHD 395
V + ++ + R G L++E+Y+ + S + PD +++ T L++A ++ D
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 396 AHDRTGI-GDKVRKELLLVEPRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMK 450
R G+ DK+ L+ RGG++ E A +R+ M G++
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDV-------------ETALEIRKEMDQNGIE 447
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 171/415 (41%), Gaps = 27/415 (6%)
Query: 13 LSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHAR--KLVLHSA 70
S++ + D + + Q + G HN Y LS ++ C +L + K++
Sbjct: 79 FSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY 138
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQ 130
P ++++ LI G EA+ + +M E G KP +T L+ + + +
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 131 VHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACV 186
+ V+ G + ++ + + A ++ +M ER V ++ +I
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 187 ENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL--- 243
++ L + F +M GF+ D +++ G+ GRW +LR M+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKAD-----IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 244 --SCQLGTALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHGFAEEALS 297
+AL+D + K G L A + + M +R + +T++++I G + ++A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
+ ++M PN T+ ++ A ++D+G FR+M + G+ V Y ++
Sbjct: 374 MLDLMVSK--GCGPNIRTFNILINGYCKANLIDDGLELFRKMS-LRGVVADTVTYNTLIQ 430
Query: 358 IYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSA-CSVHDAHDRTGIGDKVRK 408
+ G L A E Q M V PD + ++ LL C + I +K+ K
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 175/438 (39%), Gaps = 62/438 (14%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P I ++ L A + + + ++M +G+ N T ++ CC L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+K G + D + LIN ++ +A ++ D M E T ++ N+++
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
N + D V +M +GF+P+E + VL+ M S Q
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTY---------------------GPVLKVMCKSGQ- 227
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHD 307
TAL A+ R + ER K + + +S +I GL + G + A +LF M
Sbjct: 228 -TAL--------AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-- 276
Query: 308 NIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLRE 367
+ + + Y ++ +AG D+G + R+M I P +V + A++D + + G LRE
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 368 AYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDRT----------GIGDKVRKELLLVE 414
A E + M ++PD + + +L+ + D+ G G +R +L+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI- 394
Query: 415 PRRGGNLVIVANLYAEAGMWERAANVRRVMRDGGMKKMAGESCVDLGG-----SMIRFFA 469
N ANL + R ++R V+ D + +LG + +
Sbjct: 395 -----NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 470 GYDSRPDLIPVYHLLDGL 487
RPD++ LLDGL
Sbjct: 450 SRRVRPDIVSYKILLDGL 467
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 149/353 (42%), Gaps = 51/353 (14%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
I + LIRGF + + + R M +R + P+ + F L+ C LRE +++H +
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITA-CVENL 189
++ G+ D +LI+ + + ++ A + D M + ++N +I C NL
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 190 WLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGT 249
+ DG+E F KM G D + ++ ELG L + + + ++V R +
Sbjct: 403 -IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-------- 453
Query: 250 ALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+ +++++ ++ GL +G E+AL +FE + ++ +
Sbjct: 454 -----------------------RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK--M 488
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAY 369
+ Y ++ +A VD+ + F + + G+KP + Y M+ + G L EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 370 EFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
+ M + P+ + L+ A G GD + L+ E +R G
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRA--------HLGEGDATKSAKLIEEIKRCG 592
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 10/262 (3%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
R ++ TP ++++ LI F EA + ++M +RG+ P+ +T+ L+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ L + + V G ++ N LIN Y + I D ++F +M R V++
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
N++I E L E F +M PD S ++L + G + ++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEE 294
M L + ++ + + A +F + K +V T++ MI GL + G E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 295 ALSLFEMMSENHDNIRPNYVTY 316
A LF M E D PN TY
Sbjct: 546 ADLLFRKMEE--DGHSPNGCTY 565
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 8/246 (3%)
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
++++ +P +++ LI GF + +A + M +G PN TF L+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ + +G ++ G+ +D N LI + K+ A+++F EM R VS+
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL 238
++ +N +E F K+ S E D +++ + + C + L
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 239 RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEE 294
+G+ + ++ K G+L A L+F +ME+ N T++ +I G A +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 295 ALSLFE 300
+ L E
Sbjct: 581 SAKLIE 586
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 55/338 (16%)
Query: 54 SPSKNLTHARKLV----LHSATPSPISWNILIRGFATSD--SPIEAIWVFRKMRERGVKP 107
S S + A++LV P IS+N LI S +P A+ + +R G++P
Sbjct: 236 SRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRP 295
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
+ +T+ LL C+ S L +V D D++ N +I+ YGRC +A ++F
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 168 DEMPER----TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
E+ + V++NS++ A E + +M+ GF DE +
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY---------- 405
Query: 224 GYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-----KRNVLT 278
++ MYGK G L A +++ M+ + +T
Sbjct: 406 -------------------------NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAIT 440
Query: 279 WSAMILGLAQHGFAEEALSLFEMMSENHD-NIRPNYVTYLGVLCACSHAGMVDEGYRYFR 337
++ +I L + EA +L MSE D I+P TY ++C + AG +E F
Sbjct: 441 YTVLIDSLGKANRTVEAAAL---MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 338 EMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
M G KP + Y M+D+ R R+A+ + M
Sbjct: 498 CM-LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 32/247 (12%)
Query: 160 ILDARKVFDEMPERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSA 219
ILDAR V + TP + V+ + + W R +E F + + MV
Sbjct: 146 ILDARLV-----QMTPTDYCFVVKSVGQESWQR-ALEVFEWLNLRHWHSPNARMV----- 194
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLS-------CQLGTALVDMYGKSGALGYARLVFERME 272
A LG L GRW + + + Q+ A++ +Y +SG A+ + + M
Sbjct: 195 AAILGVL--GRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMR 252
Query: 273 KR----NVLTWSAMILGLAQHG--FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHA 326
+R ++++++ +I + G A+ L +M+ + +RP+ +TY +L ACS
Sbjct: 253 QRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV--RNSGLRPDAITYNTLLSACSRD 310
Query: 327 GMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVN---PDPIV 383
+D + F +ME H +P + Y AM+ +YGR GL EA + + PD +
Sbjct: 311 SNLDGAVKVFEDME-AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVT 369
Query: 384 WRTLLSA 390
+ +LL A
Sbjct: 370 YNSLLYA 376
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 144 VYVGNNLINFYGRCKKILDARKVFDEMPER--TP--VSWNSVITACVENLWLRD--GVEY 197
V V N ++ Y R K A+++ D M +R P +S+N++I A +++ L VE
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 198 FLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGK 257
+R SG PD + +LSAC+ L V + A++ +YG+
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 258 SGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNY 313
G A +F +E + + +T+++++ A+ E+ +++ M + +
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM--GFGKDE 402
Query: 314 VTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQ 373
+TY ++ G +D + +++M+ + G P + Y ++D G+A EA +
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 374 SM 375
M
Sbjct: 463 EM 464
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 176 VSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQ 235
+++N++++AC + L V+ F M +PD + M+S G + + +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 236 VVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEK----RNVLTWSAMILGLAQHGF 291
+ L+G +L+ + + + V+++M+K ++ +T++ +I + G
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 292 AEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVH 351
+ AL L++ M + P+ +TY ++ + A E EM V GIKP +
Sbjct: 418 LDLALQLYKDM-KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV-GIKPTLQT 475
Query: 352 YGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLL 388
Y A++ Y +AG EA + M PD + + +L
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 140/375 (37%), Gaps = 63/375 (16%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALRE--- 127
TP +WN L+ +A A +F M G P + LL V L E
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 128 --------GKQVHADAVKFGLDSDVYVGN------------------------NLINFYG 155
G ++ ++ LD+ GN +I
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 156 RCKKILDARKVFDEMPERT----PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
+ K++ DA + EM E WNS++ + V+ + +++ +G EPDET
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 212 SM-VLMLSAC----AELGYLSLGRWVHCQVVLRGMVLSCQLGT--ALVDMYGKSGALGYA 264
+ L++ C E GYL + + +R + L +L T +L+ +GK L A
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQ-------MRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 265 RLVFERMEKRNVLT----WSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVL 320
+FE + + + + M+ G +A L +MM + I P T ++
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM--KNAGIEPTLATMHLLM 1074
Query: 321 CACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP---V 377
+ S +G E + ++ ++ + Y +++D Y R+ E + M +
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTE-VELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Query: 378 NPDPIVWRTLLSACS 392
PD +W + A S
Sbjct: 1134 EPDHRIWTCFVRAAS 1148
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 126 REGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEM----PERTPVSWNSV 181
++ + V + + G D+ N+L++ Y +C AR +F+ M P T S N +
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 182 ITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGM 241
+ A + L + +++ GF+ ++S++LML A A G + + ++ + G
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKRN----VLTWSAMILGLAQHGFAEEALS 297
+ + +L ++++ K + A ++ ME+ N + W++M+ ++ +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
+++ + E + P+ TY ++ +EGY ++M + G+ P + Y +++
Sbjct: 949 VYQRIKET--GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL-GLDPKLDTYKSLIS 1005
Query: 358 IYGRAGLLREAYEFIQSM 375
+G+ L +A + + +
Sbjct: 1006 AFGKQKCLEQAEQLFEEL 1023
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 8/203 (3%)
Query: 178 WNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVV 237
+ +++ CV N + + F +R SG E E+ M+ +LG+ V Q
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 238 LRGMVLSCQ-LGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFA 292
+G +C + T +++ YGK A V + + ++ TW++++ AQ G
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
E A ++F M D P + +L A G ++E Y E++ + G K
Sbjct: 804 ERARAIFNTMM--RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM-GFKISKSSI 860
Query: 353 GAMVDIYGRAGLLREAYEFIQSM 375
M+D + RAG + E + SM
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSM 883
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/503 (19%), Positives = 202/503 (40%), Gaps = 59/503 (11%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSKNLTHA-- 62
+LS N + +L +D +++ G + N ++ + V L S+ L A
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN--IMVDRLCKSQKLDEACA 433
Query: 63 --RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCA 120
++ TP I++ LI G +A V+ KM + + N + + L+K
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 121 VGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV---- 176
+G +++ D + D+ + N ++ + + R +F+E+ R V
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 177 SWNSVITACVENLWLRDGVEYFL-----------------------------------KM 201
S++ +I ++ + + E F +M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 202 RGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGAL 261
+ GFEP + ++ A++ L + + + + L+ + ++L+D +GK G +
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 262 GYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYL 317
A L+ E + ++ N+ TW++++ L + EAL F+ M E PN VTY
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK--CTPNQVTYG 731
Query: 318 GVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPV 377
++ ++ + +++EM+ G+KP + Y M+ +AG + EA
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQK-QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 378 N---PDPIVWRTLLSACSVHD-AHDRTGIGDKVRKELLLVEPRRGGNLVIVANLYAEAGM 433
N PD + ++ S + A D + ++ R+ L P V++ + +
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL---PIHNKTCVVLLDTLHKNDC 847
Query: 434 WERAANVRRVMRDGGMKKMAGES 456
E+AA V V+R+ G + A S
Sbjct: 848 LEQAAIVGAVLRETGKARHAARS 870
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 146/333 (43%), Gaps = 17/333 (5%)
Query: 70 ATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGK 129
+ PS I++N ++ EA+ VF +M+ + PN T+ L+ L
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 130 QVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER--TP--VSWNSVITAC 185
++ K GL +V N +++ + +K+ +A +F+EM + TP +++ S+I
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 186 VENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSC 245
+ + D + + KM S + ++ G G ++ ++ +
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 246 QLGTALVDMYGKSGALGYARLVFERMEKRNVL----TWSAMILGLAQHGFAEEALSLFEM 301
QL +D K+G R +FE ++ R + ++S +I GL + GFA E LF
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 302 MSENHDNIRPN-YVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYG 360
M E + Y + C C G V++ Y+ EM+ G +P +V YG+++D
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKC---GKVNKAYQLLEEMK-TKGFEPTVVTYGSVIDGLA 633
Query: 361 RAGLLREAY---EFIQSMPVNPDPIVWRTLLSA 390
+ L EAY E +S + + +++ +L+
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 34/422 (8%)
Query: 10 NQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYVC----SLSPSKNLTH-ARK 64
N L ++ CR+ D L QI + + G + E+V C L ++ RK
Sbjct: 102 NSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK 161
Query: 65 LVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSA 124
P+ ++ LI F+ + + +F++M+E G +P F L++ A
Sbjct: 162 FKFR---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 125 LREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVSWNS 180
+ + + LD+D+ + N I+ +G+ K+ A K F E+ + V++ S
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 181 VITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVL-- 238
+I + L + VE F + + P + M+ +GY S G++ +L
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI-----MGYGSAGKFDEAYSLLER 333
Query: 239 ---RGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR---NVLTWSAMILGLAQHGFA 292
+G + S ++ K G + A VFE M+K N+ T++ +I L + G
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 293 EEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHY 352
+ A L + M + + PN T ++ + +DE F EM+Y P + +
Sbjct: 394 DTAFELRDSMQKA--GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY-KVCTPDEITF 450
Query: 353 GAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKE 409
+++D G+ G + +AY+ + M + IV+ +L+ H R G K+ K+
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN---FFNHGRKEDGHKIYKD 507
Query: 410 LL 411
++
Sbjct: 508 MI 509
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 143/368 (38%), Gaps = 40/368 (10%)
Query: 148 NNLINFYGRCKKILDARKVFDEMP-ERTPVSWNSVIT---ACVENLWLRDGVEYFLKMRG 203
N+L+ RC+ ++ EM S N+ I CV+ LR+G + MR
Sbjct: 102 NSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK 161
Query: 204 SGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
F P ++ ++ A + + + + + Q+ G + L T L+ + K G +
Sbjct: 162 FKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDS 221
Query: 264 ARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTY--- 316
A + + M+ +++ ++ I + G + A F + N ++P+ VTY
Sbjct: 222 ALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN--GLKPDEVTYTSM 279
Query: 317 LGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP 376
+GVLC A +DE F +E + P Y M+ YG AG EAY ++
Sbjct: 280 IGVLC---KANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 377 VN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGGNLV---IVANLYAE 430
P I + +L+ + G D+ K ++ NL I+ ++
Sbjct: 336 AKGSIPSVIAYNCILTCLR------KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR 389
Query: 431 AGMWERAANVRRVMRDGGM-----------KKMAGESCVDLGGSMIRFFAGYDSRPDLIP 479
AG + A +R M+ G+ ++ +D +M PD I
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 480 VYHLLDGL 487
L+DGL
Sbjct: 450 FCSLIDGL 457
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 152/360 (42%), Gaps = 49/360 (13%)
Query: 67 LHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALR 126
+ T + I++NILI GF + + + R M +R + PN +TF L+ LR
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 127 EGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVI 182
E +++H + + G+ D +LI+ + + + A ++ D M + ++N +I
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 183 TACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMV 242
+ + DG+E F KM G D + ++ ELG L++ + + ++V R +
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV- 469
Query: 243 LSCQLGTALVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMM 302
N++T+ ++ GL +G +E+AL +FE +
Sbjct: 470 ------------------------------PPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
++ + + Y ++ +A VD+ + F + + G+KP + Y M+ +
Sbjct: 500 EKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPGVKTYNIMIGGLCKK 556
Query: 363 GLLREAYEFIQSMPVN---PDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVEPRRGG 419
G L EA + M + PD + L+ A G GD + L+ E +R G
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRA--------HLGDGDATKSVKLIEELKRCG 608
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 172/410 (41%), Gaps = 31/410 (7%)
Query: 20 RSIDQLHQIQAQFHIHGHYHNTYLLSELVYVCSLSPSK---NLTHARKLVLHSATPSPIS 76
+ D + + Q + G HN Y LS ++ C K + K++ P+ I+
Sbjct: 102 KQYDLVLALCKQMELKGIAHNLYTLSIMIN-CFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAV 136
++ LI G EA+ + +M E G KP+ +T L+ + E + V
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 137 KFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLWLR 192
++G + ++N + + A ++ +M ER V ++ +I ++ L
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 193 DGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL-----SCQL 247
+ F +M G + + +++ G+ + GRW +LR M+ +
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIG-----GFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 248 GTALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHGFAEEALSLFEMM- 302
+ L+D + K G L A + + M R + +T++++I G + ++A + ++M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 303 SENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRA 362
S+ D PN T+ ++ A +D+G FR+M + G+ V Y ++ +
Sbjct: 396 SKGCD---PNIRTFNILINGYCKANRIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCEL 451
Query: 363 GLLREAYEFIQSM---PVNPDPIVWRTLLSA-CSVHDAHDRTGIGDKVRK 408
G L A E Q M V P+ + ++ LL C ++ I +K+ K
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 14/319 (4%)
Query: 48 VYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
+Y+C+L + AR+L+ A P +S+N L+ G+ +EA +F +R + P
Sbjct: 348 IYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP 407
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
+ +T+ L+ L +++ + + DV L+ + + + A +V+
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 168 DEMPER--TPVSWNSVITACVENLWLRDGVEYFL---KMRGSGFE-PDETSMVLMLSACA 221
DEM + P + + T V L L D + F +M + PD T + +
Sbjct: 468 DEMLRKGIKPDGY-AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 222 ELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVL 277
++G L ++ G+V T ++ Y ++G AR +++ M ++ +V+
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 278 TWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFR 337
T+ +I G A+ G E+A M + +RPN +T+ +L AG +DE YRY
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKR--GVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 338 EMEYVHGIKPLMVHYGAMV 356
+ME GI P Y ++
Sbjct: 645 KME-EEGIPPNKYSYTMLI 662
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 44/383 (11%)
Query: 48 VYVCSLSPSKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKP 107
VY K L K++ PS + NI+++ S +A V+ M E G+ P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 108 NKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVF 167
+TF +L C L ++ + + ++ N LIN + + K+ +AR+
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 168 DEMPER----TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAEL 223
+M TP S+N +I + D +M +G P ++ + + A +
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 224 --------------------------GYLSLGRWVHCQVV---LRGMVLSCQLGT--ALV 252
GY+ +G++V ++ LR + + T L+
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 253 DMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDN 308
D +SG L A+ + E M + +V+T++ ++ G ++G A +++ M
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK--G 474
Query: 309 IRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREA 368
I+P+ Y G D+ +R EM P + Y +D + G L +A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 369 YEF---IQSMPVNPDPIVWRTLL 388
EF I + + PD + + T++
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVI 557
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 139 GLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVSWNSVITACVENLWLRDG 194
G D + ++ GR K+ + K+ DEM + V++N +I + +L++
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 195 VEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDM 254
+ F +M+ +G EPD + ++ A+ G+L + ++ ++ G+ + +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 255 YGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
GK+G L A +F M + N++T++ MI A+ E AL L+ M + +
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM--QNAGFQ 531
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
P+ VTY V+ H G ++E F EM+ + + P YG +VD++G+AG + +A++
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 371 FIQSM 375
+ Q+M
Sbjct: 591 WYQAM 595
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 143/305 (46%), Gaps = 18/305 (5%)
Query: 101 RERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKI 160
R+ G K + T+ ++ E ++ + V+ G + N LI+ YGR +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 161 LDARKVFDEM------PERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMV 214
+A VF++M P+R V++ ++I + +L ++ + +M+ +G PD +
Sbjct: 411 KEAMNVFNQMQEAGCEPDR--VTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 215 LMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME-- 272
++++ + G+L + C++V +G + ++ ++ K+ A ++ M+
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 273 --KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVD 330
+ + +T+S ++ L GF EEA +F M N P+ Y ++ AG VD
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK--NWVPDEPVYGLLVDLWGKAGNVD 586
Query: 331 EGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM---PVNPDPIVWRTL 387
+ +++++ M G++P + +++ + R + EAY +QSM ++P + L
Sbjct: 587 KAWQWYQAMLQA-GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Query: 388 LSACS 392
LS C+
Sbjct: 646 LSCCT 650
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 52/366 (14%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P+ ++ +LI+ S+ EA+ + ++M E G+KPN T+ L+ + +++
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKK-----------ILDARK--------------- 165
++ GL +V N LIN G CK+ ++++RK
Sbjct: 381 LGQMLEKGLMPNVITYNALIN--GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 166 ----------VFDEMPERT----PVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
V ++M ER V++NS+I + M G PD+
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 212 SMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERM 271
+ M+ + + + + + +G+ + + TAL+D Y K+G + A L+ E+M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 272 EKRNV----LTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAG 327
+N LT++A+I GL G +EA L E M + ++P T ++ G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK--IGLQPTVSTDTILIHRLLKDG 616
Query: 328 MVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVW 384
D Y F++M G KP Y + Y R G L +A + + M V+PD +
Sbjct: 617 DFDHAYSRFQQM-LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 385 RTLLSA 390
+L+
Sbjct: 676 SSLIKG 681
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 159/373 (42%), Gaps = 58/373 (15%)
Query: 77 WNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLK-CCAVGSALREGKQVHADA 135
+N L+ A E V+ +M E V PN T+ ++ C +G+ + E Q +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGN-VEEANQYVSKI 244
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVSWNSVITACVENLWL 191
V+ GLD D + +LI Y + K + A KVF+EMP R V++ +I +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 192 RDGVEYFLKMRG-----------------------------------SGFEPD-ETSMVL 215
+ ++ F+KM+ +G +P+ T VL
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 216 MLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR- 274
+ S C++ + R + Q++ +G++ + AL++ Y K G + A V E ME R
Sbjct: 365 IDSLCSQCKF-EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 275 ---NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDE 331
N T++ +I G + +A+ + M E + P+ VTY ++ +G D
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLER--KVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 332 GYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTLL 388
YR M G+ P Y +M+D ++ + EA + S+ VNP+ +++ L+
Sbjct: 481 AYRLLSLMN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 389 S----ACSVHDAH 397
A V +AH
Sbjct: 540 DGYCKAGKVDEAH 552
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 143/334 (42%), Gaps = 26/334 (7%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
PS ++ L+ + I+++ +M+ G+ N T LL C S L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVSWNSVITACVE 187
+K G + + +L+N + R ++ DA +FD+M + V +N++I +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW------VHCQVVLRGM 241
+ + + ++ +M G PD + ++S G S GRW V C + R +
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLIS-----GLCSSGRWSDATRMVSC-MTKREI 252
Query: 242 VLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALS 297
AL+D K G + A +E M +R +++T+S +I GL + +EA
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 298 LFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVD 357
+F M P+ VTY ++ + V+ G + F EM G+ V Y ++
Sbjct: 313 MFGFMVSK--GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ-RGVVRNTVTYTILIQ 369
Query: 358 IYGRAGLLREAYEFIQSM---PVNPDPIVWRTLL 388
Y RAG L A E + M V+P+ I + LL
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 176/416 (42%), Gaps = 48/416 (11%)
Query: 5 SLSNKNQCLSLLNLCRSIDQLHQIQAQFHIHGHYHNTYLLSELVYV-CSLSP-SKNLTHA 62
S+++ ++ LS ++ + D + + Q + G HN + L+ C S S L+
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 63 RKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVG 122
K++ PS +++ L+ GF D +A+++F +M G KPN + + ++
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 123 SALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSW 178
+ + K G+ DV N+LI+ + DA ++ M +R ++
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 179 NSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLM---------LSACAEL------ 223
N++I ACV+ + + E++ +M +PD + L+ L E+
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 224 ---------------GYLSLGRWVH-----CQVVLRGMVLSCQLGTALVDMYGKSGALGY 263
GY + H C++ RG+V + T L+ Y ++G L
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 264 ARLVFERM----EKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGV 319
A +F RM N++T++ ++ GL +G E+AL + M +N + + VTY +
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN--GMDADIVTYNII 437
Query: 320 LCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSM 375
+ AG V + + + + G+ P + Y M+ + GL REA + M
Sbjct: 438 IRGMCKAGEVADAWDIYCSLN-CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P ++N LI EA + +M R + P+ +T+ L+ + S L E +++
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWL 191
V G DV + LIN Y + KK+ K+F EM +R V N+V + +
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYTILIQGYC 372
Query: 192 RDGV-----EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQ 246
R G E F +M G P+ + ++L + G + + + GM
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 247 LGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMM 302
++ K+G + A ++ + + ++ T++ M+LGL + G EA +LF M
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 303 SENHDNIRPN 312
E D I PN
Sbjct: 493 KE--DGILPN 500
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 53/365 (14%)
Query: 71 TPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLL----KCCAVGSALR 126
TPS ++N+++R + A +F +MR+R + P++ T+ L+ K SAL
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 127 -----EGKQVHADAVKF--------------------------GLDSDVYVGNNLINFYG 155
E +V D V + G+ D+ N++IN YG
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 156 RCKKILDARKVFDEMPER----TPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDET 211
+ K +AR + EM E VS++++++ VEN + + F +M+ D T
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 212 SMVLMLSACAELGYLSLGR---WVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVF 268
+ +M+ +L + W ++ + V+S ++ +YG++ G A +F
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY---NTILRVYGEAELFGEAIHLF 388
Query: 269 ERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACS 324
M+++ NV+T++ MI + E+A +L + M I PN +TY ++
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR--GIEPNAITYSTIISIWG 446
Query: 325 HAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYEFIQSMPVNPDPIVW 384
AG +D F+++ G++ V Y M+ Y R GL+ A + + + PD I
Sbjct: 447 KAGKLDRAATLFQKLR-SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL-PDNIPR 504
Query: 385 RTLLS 389
T ++
Sbjct: 505 ETAIT 509
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 153/366 (41%), Gaps = 21/366 (5%)
Query: 56 SKNLTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFL 115
SK ++ +L TP +++N +I + + EA + ++M E GV PN +++ L
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 116 LKCCAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP---- 171
L E V A+ + D+ N +I+ YG+ + +A ++F +
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 172 ERTPVSWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRW 231
E VS+N+++ E + + F M+ E + + M+ +
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 232 VHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLA 287
+ ++ RG+ + + ++ ++GK+G L A +F+++ V + + MI+
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 481
Query: 288 QHGFAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKP 347
+ G A L H+ P+ + + + AG +E FR+ +K
Sbjct: 482 RVGLMGHAKRLL------HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 348 LMVHYGAMVDIYGRAGL---LREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGD 404
+ V +G M+++Y R + E +E +++ PD V +L+A ++ D
Sbjct: 536 ISV-FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK---AD 591
Query: 405 KVRKEL 410
V +E+
Sbjct: 592 TVYREM 597
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 96/233 (41%), Gaps = 35/233 (15%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+++N +I+ + + +A + ++M+ RG++PN +T+ ++ L +
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 135 AVKFGLDSDVYVGNNLINFY------GRCKKILDARKVFDEMPERTPVS----------- 177
G++ D + +I Y G K++L K+ D +P T ++
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEA 520
Query: 178 -W------------NSVITACVENLWLRDG-----VEYFLKMRGSGFEPDETSMVLMLSA 219
W + + C+ NL+ R+ +E F KMR +G+ PD + ++L+A
Sbjct: 521 TWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNA 580
Query: 220 CAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERME 272
+ V+ ++ G V ++ ++ +Y +F+R+E
Sbjct: 581 YGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 633
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 24/347 (6%)
Query: 64 KLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGS 123
++V PS + + L+ A I+ +KM G+ + +F L+ C S
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 124 ALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMP----ERTPVSWN 179
L V +K G + + +L++ + +I DA + M E V +N
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 180 SVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLR 239
++I +N L +E +M G D + +L+ G GRW +LR
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT-----GLCYSGRWSDAARMLR 235
Query: 240 GMVL-----SCQLGTALVDMYGKSGALGYARLVFERMEKRNV----LTWSAMILGLAQHG 290
M+ TAL+D++ K G L A+ +++ M + +V +T++++I GL HG
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 291 FAEEALSLFEMMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMV 350
+A F++M+ PN VTY ++ MVDEG + F+ M G +
Sbjct: 296 RLYDAKKTFDLMASK--GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS-CEGFNADIF 352
Query: 351 HYGAMVDIYGRAGLLREAYE---FIQSMPVNPDPIVWRTLLSACSVH 394
Y ++ Y + G LR A + ++ S V PD I LL V+
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 38/305 (12%)
Query: 75 ISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHAD 134
+++N L+ G S +A + R M +R + P+ +TF L+ L E ++++ +
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 135 AVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVENLW 190
++ +D + N++IN ++ DA+K FD M + V++N++I+ +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 191 LRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTA 250
+ +G++ F +M GF D + ++ ++G L + + C +V R +
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT-------- 383
Query: 251 LVDMYGKSGALGYARLVFERMEKRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNIR 310
+++T ++ GL +G E AL F+ M E+ I
Sbjct: 384 -----------------------PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI- 419
Query: 311 PNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAGLLREAYE 370
V Y ++ A V++ + F + V G+KP Y M+ + G REA E
Sbjct: 420 -GIVAYNIMIHGLCKADKVEKAWELFCRLP-VEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 371 FIQSM 375
I+ M
Sbjct: 478 LIRRM 482
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 158/385 (41%), Gaps = 22/385 (5%)
Query: 20 RSIDQLHQIQAQFHIHGHYHNTYLLSELVY-VCSLSP-SKNLTHARKLVLHSATPSPISW 77
R + + + ++G H+ Y + L++ C S S L+ K++ PS +++
Sbjct: 85 RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 78 NILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADAVK 137
L+ GF + +A + M + G +PN + + L+ L ++ + K
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 138 FGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERT----PVSWNSVITACVENLWLRD 193
GL +DV N L+ + DA ++ +M +R+ V++ ++I V+ L +
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 194 GVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQLGTALVD 253
E + +M S +P+ + +++ G L + + +G + L+
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 254 MYGKSGALGYARLVFERME----KRNVLTWSAMILGLAQHGFAEEALSLFEMMSENHDNI 309
+ K + +F+RM ++ T++ +I G Q G AL +F M +
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR--V 382
Query: 310 RPNYVTYLGVLCACSHAGMVDEGYRYF---REMEYVHGIKPLMVHYGAMVDIYGRAGLLR 366
P+ +T+ +L G ++ F RE E GI V Y M+ +A +
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI----VAYNIMIHGLCKADKVE 438
Query: 367 EAYEFIQSMP---VNPDPIVWRTLL 388
+A+E +P V PD + ++
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMI 463
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 143/316 (45%), Gaps = 16/316 (5%)
Query: 72 PSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQV 131
P + + L+ G S +A + R M +R +KP+ +TF L+ + +++
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 132 HADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPER----TPVSWNSVITACVE 187
+ + ++ + +++ +LIN + + +AR++F M + V++ S+I +
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 188 NLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVLSCQL 247
+ D ++ F +M G + + ++ ++G ++ + V +V RG+ + +
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 248 GTALVDMYGKSGALGYARLVFERMEKR-------NVLTWSAMILGLAQHGFAEEALSLFE 300
L+ +G + A ++FE M+KR N+ T++ ++ GL +G E+AL +FE
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 301 MMSENH-DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIY 359
M + D Y + +C AG V F + G+KP +V Y M+
Sbjct: 450 DMRKREMDIGIITYTIIIQGMC---KAGKVKNAVNLFCSLP-SKGVKPNVVTYTTMISGL 505
Query: 360 GRAGLLREAYEFIQSM 375
R GL EA+ + M
Sbjct: 506 FREGLKHEAHVLFRKM 521
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 139/351 (39%), Gaps = 60/351 (17%)
Query: 76 SWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKCCAVGSALREGKQVHADA 135
+ N+L+ F S P A KM + G +P+ +TF L+ +G+ + E +
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 136 VKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPVSWNSVITACVENLWLRDGV 195
V+ G+ DV V + ++I + +N + +
Sbjct: 169 VEMGIKPDV-------------------------------VMYTTIIDSLCKNGHVNYAL 197
Query: 196 EYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHCQVVLRGMVL-----SCQLGTA 250
F +M G PD V+M ++ G + GRW +LRGM A
Sbjct: 198 SLFDQMENYGIRPD----VVMYTSLVN-GLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 251 LVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHGFAEEALSLFEMMSENH 306
L+D + K G A ++ M + N+ T++++I G G +EA +F +M
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK- 311
Query: 307 DNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLMVHYGAMVDIYGRAG--- 363
P+ V Y ++ VD+ + F EM G+ + Y ++ +G+ G
Sbjct: 312 -GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ-KGLTGNTITYTTLIQGFGQVGKPN 369
Query: 364 LLREAYEFIQSMPVNPDPIVWRTLLSACSVHDAHDRTGIGDKVRKELLLVE 414
+ +E + + S V P+ + LL C ++ KV+K L++ E
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLH-CLCYNG--------KVKKALMIFE 411
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 151/355 (42%), Gaps = 17/355 (4%)
Query: 59 LTHARKLVLHSATPSPISWNILIRGFATSDSPIEAIWVFRKMRERGVKPNKLTFPFLLKC 118
++ ++V P + + +I + A+ +F +M G++P+ + + L+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 119 CAVGSALREGKQVHADAVKFGLDSDVYVGNNLINFYGRCKKILDARKVFDEMPERTPV-- 176
R+ + K + DV N LI+ + + K LDA ++++EM +
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 177 --SWNSVITACVENLWLRDGVEYFLKMRGSGFEPDETSMVLMLSACAELGYLSLGRWVHC 234
++ S+I + + + F M G PD + +++ + + +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 235 QVVLRGMVLSCQLGTALVDMYGKSGALGYARLVFERMEKR----NVLTWSAMILGLAQHG 290
++ +G+ + T L+ +G+ G A+ VF M R N+ T++ ++ L +G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 291 FAEEALSLFE-MMSENHDNIRPNYVTYLGVLCACSHAGMVDEGYRYFREMEYVHGIKPLM 349
++AL +FE M D + PN TY +L + G +++ F +M + +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK-REMDIGI 460
Query: 350 VHYGAMVDIYGRAGLLREAYEFIQSMP---VNPDPIVWRTLLSACS----VHDAH 397
+ Y ++ +AG ++ A S+P V P+ + + T++S H+AH
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515