Miyakogusa Predicted Gene

Lj0g3v0103419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0103419.1 Non Chatacterized Hit- tr|I3S5C2|I3S5C2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,FA_hydroxylase,Fatty acid hydroxylase; STEROL
DESATURASE,NULL,CUFF.5856.1
         (275 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02580.1 | Symbols: STE1, DWF7, BUL1 | sterol 1 | chr3:547048...   427   e-120
AT3G02590.1 | Symbols:  | Fatty acid hydroxylase superfamily pro...   399   e-111

>AT3G02580.1 | Symbols: STE1, DWF7, BUL1 | sterol 1 |
           chr3:547048-548615 FORWARD LENGTH=281
          Length = 281

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/264 (75%), Positives = 225/264 (85%), Gaps = 2/264 (0%)

Query: 12  FMDDADLYNRIVLGSLLPHTFWVSLPRFLQTWLRNYIGGVLLYFISGFLWCFYIYFWKRN 71
           F+D+   YNRIVL  LLP   W  LP FLQTWLRNY+ G LLYFISGFLWCFYIY+ K N
Sbjct: 11  FVDETSFYNRIVLSHLLPANLWEPLPHFLQTWLRNYLAGTLLYFISGFLWCFYIYYLKIN 70

Query: 72  VYLPKDSIPSRRAMLLQISVAMKAMPWYSLLPTISEYLTETGWTKSFPRIYNVGWVSYIV 131
           VYLPKD+IP+ +AM LQ+ VAMKAMPWY+LLPT+SE + E GWTK F  I   GW+ Y V
Sbjct: 71  VYLPKDAIPTIKAMRLQMFVAMKAMPWYTLLPTVSESMIERGWTKCFASIGEFGWILYFV 130

Query: 132 CLAIYMTIVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGILQA 191
            +AIY+  VEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHP+DGILQA
Sbjct: 131 YIAIYLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPVDGILQA 190

Query: 192 LPHSLALFVVPIHFTAHLALIFIEGIWTANIHDCIHGKVWPVMGAGYHTIHHTTYRHNYG 251
           +PH +ALF+VPIHFT H+ L+F+E IWTANIHDCIHG +WPVMGAGYHTIHHTTY+HNYG
Sbjct: 191 VPHVIALFIVPIHFTTHIGLLFMEAIWTANIHDCIHGNIWPVMGAGYHTIHHTTYKHNYG 250

Query: 252 HYTIWMDWMFGTLRDP--EEDEDK 273
           HYTIWMDWMFG+LRDP  EED++K
Sbjct: 251 HYTIWMDWMFGSLRDPLLEEDDNK 274


>AT3G02590.1 | Symbols:  | Fatty acid hydroxylase superfamily
           protein | chr3:549340-550553 FORWARD LENGTH=279
          Length = 279

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 182/273 (66%), Positives = 222/273 (81%)

Query: 1   MEDPTSDYGRLFMDDADLYNRIVLGSLLPHTFWVSLPRFLQTWLRNYIGGVLLYFISGFL 60
           M    +DY    +++   YNR+VL  LLP   W  LP FLQTWLRNY+ G +LYFISGFL
Sbjct: 1   MAATMADYNDQIVNETSFYNRMVLSHLLPVNLWEPLPHFLQTWLRNYLAGNILYFISGFL 60

Query: 61  WCFYIYFWKRNVYLPKDSIPSRRAMLLQISVAMKAMPWYSLLPTISEYLTETGWTKSFPR 120
           WCFYIY+ K NVY+PK+SIP+R+AMLLQI VAMKAMPWY+LLP +SEY+ E GWTK +  
Sbjct: 61  WCFYIYYLKLNVYVPKESIPTRKAMLLQIYVAMKAMPWYTLLPAVSEYMIEHGWTKCYST 120

Query: 121 IYNVGWVSYIVCLAIYMTIVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGL 180
           + +  W    + +A+Y+ +VEF IYW+H+ELHDIK LYK+LHATHH+YNKQNTLSPFAGL
Sbjct: 121 LDHFNWFLCFLYIALYLVLVEFMIYWVHKELHDIKFLYKHLHATHHMYNKQNTLSPFAGL 180

Query: 181 AFHPLDGILQALPHSLALFVVPIHFTAHLALIFIEGIWTANIHDCIHGKVWPVMGAGYHT 240
           AFHPLDGILQA+PH +ALF+VPIH   HL+L+F+EGIWTA+IHDCIHG +WP+MGAGYHT
Sbjct: 181 AFHPLDGILQAIPHVIALFIVPIHLITHLSLLFLEGIWTASIHDCIHGNIWPIMGAGYHT 240

Query: 241 IHHTTYRHNYGHYTIWMDWMFGTLRDPEEDEDK 273
           IHHTTY+HNYGHYTIWMDWMFG+L  P  ++D 
Sbjct: 241 IHHTTYKHNYGHYTIWMDWMFGSLMVPLAEKDS 273