Miyakogusa Predicted Gene

Lj0g3v0103099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0103099.1 tr|B9HWJ1|B9HWJ1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_566638 PE=4
SV=1,44.05,0.0000000004,Bromo adjacent homology domain,Bromo adjacent
homology (BAH) domain; BAH,Bromo adjacent homology (BA,gene.g7816.t1.1
         (444 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55600.3 | Symbols:  | agenet domain-containing protein / bro...   467   e-132
AT5G55600.2 | Symbols:  | agenet domain-containing protein / bro...   467   e-132
AT5G55600.1 | Symbols:  | agenet domain-containing protein / bro...   467   e-132
AT1G68580.2 | Symbols:  | agenet domain-containing protein / bro...   182   5e-46
AT1G68580.1 | Symbols:  | agenet domain-containing protein / bro...   168   5e-42

>AT5G55600.3 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  467 bits (1202), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/448 (54%), Positives = 307/448 (68%), Gaps = 23/448 (5%)

Query: 1   MTVNDRCFVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLE 60
           M  ND  FVEWKE FVSQERGNRVVHY+LKDS GES+LAV+GTERSVRHM YV +EEF+ 
Sbjct: 1   MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVR 60

Query: 61  ICGKEGCVPAGFKWRSRREVVDWLTSMLSKQLVQGERSGSP----GHNLALPHETSNGCE 116
           I G E  + +GFKWRSRREVVDWLTSMLSKQ  QG  S SP    G +   P   SNG  
Sbjct: 61  IHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSPKCESGESNGSPEFPSNGF- 119

Query: 117 NDGTALSAQIADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFV 176
              TA  AQ ++   + + N  + + +I+WSG  W CGKQLKHYP+FCRNG  I +QSFV
Sbjct: 120 ---TAQRAQASEEVRLPI-NLIIHSWEIMWSGAPWMCGKQLKHYPSFCRNGTTIGVQSFV 175

Query: 177 FVMGKEEKHFVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQV 236
           FV+ K E  +VAYLEDMYED+RG KKVKVRWFH+ +EVKGA+ ++NP+P+EVFIT +SQV
Sbjct: 176 FVLSKGEDRYVAYLEDMYEDKRGLKKVKVRWFHYTKEVKGAVALKNPNPKEVFITPHSQV 235

Query: 237 ISAECVDGLATVLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQS 296
           ISAECVDG ATVLTREHYE C+  F  +   R+H+C+RQ + +KVKPFDLSKLRGY  Q 
Sbjct: 236 ISAECVDGPATVLTREHYEECVASFPNSLLARVHMCYRQLRNSKVKPFDLSKLRGYLDQP 295

Query: 297 VLSCLHLDSNQKPEKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIR 356
           ++SCL        + + N+  + E+   G++  +GA+RS   R             +++ 
Sbjct: 296 IMSCLSSMEAGPVDCAMNIEED-EEWSEGENVMVGAERSMKKRA------------RIMS 342

Query: 357 SEQMMVHEMF-QVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFR 415
              +  +E   + +   +  +R  S   ++  P  N   K D KIE LCQDSGIRGCWFR
Sbjct: 343 DHLLTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFR 402

Query: 416 CTVVQVARKQLKVQYDDVQDEDGSGNLQ 443
           CTV+ V+RKQ+K+QYDD++DEDG GNL+
Sbjct: 403 CTVLDVSRKQVKLQYDDIEDEDGYGNLE 430


>AT5G55600.2 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  467 bits (1202), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/448 (54%), Positives = 307/448 (68%), Gaps = 23/448 (5%)

Query: 1   MTVNDRCFVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLE 60
           M  ND  FVEWKE FVSQERGNRVVHY+LKDS GES+LAV+GTERSVRHM YV +EEF+ 
Sbjct: 1   MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVR 60

Query: 61  ICGKEGCVPAGFKWRSRREVVDWLTSMLSKQLVQGERSGSP----GHNLALPHETSNGCE 116
           I G E  + +GFKWRSRREVVDWLTSMLSKQ  QG  S SP    G +   P   SNG  
Sbjct: 61  IHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSPKCESGESNGSPEFPSNGF- 119

Query: 117 NDGTALSAQIADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFV 176
              TA  AQ ++   + + N  + + +I+WSG  W CGKQLKHYP+FCRNG  I +QSFV
Sbjct: 120 ---TAQRAQASEEVRLPI-NLIIHSWEIMWSGAPWMCGKQLKHYPSFCRNGTTIGVQSFV 175

Query: 177 FVMGKEEKHFVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQV 236
           FV+ K E  +VAYLEDMYED+RG KKVKVRWFH+ +EVKGA+ ++NP+P+EVFIT +SQV
Sbjct: 176 FVLSKGEDRYVAYLEDMYEDKRGLKKVKVRWFHYTKEVKGAVALKNPNPKEVFITPHSQV 235

Query: 237 ISAECVDGLATVLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQS 296
           ISAECVDG ATVLTREHYE C+  F  +   R+H+C+RQ + +KVKPFDLSKLRGY  Q 
Sbjct: 236 ISAECVDGPATVLTREHYEECVASFPNSLLARVHMCYRQLRNSKVKPFDLSKLRGYLDQP 295

Query: 297 VLSCLHLDSNQKPEKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIR 356
           ++SCL        + + N+  + E+   G++  +GA+RS   R             +++ 
Sbjct: 296 IMSCLSSMEAGPVDCAMNIEED-EEWSEGENVMVGAERSMKKRA------------RIMS 342

Query: 357 SEQMMVHEMF-QVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFR 415
              +  +E   + +   +  +R  S   ++  P  N   K D KIE LCQDSGIRGCWFR
Sbjct: 343 DHLLTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFR 402

Query: 416 CTVVQVARKQLKVQYDDVQDEDGSGNLQ 443
           CTV+ V+RKQ+K+QYDD++DEDG GNL+
Sbjct: 403 CTVLDVSRKQVKLQYDDIEDEDGYGNLE 430


>AT5G55600.1 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  467 bits (1202), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/448 (54%), Positives = 307/448 (68%), Gaps = 23/448 (5%)

Query: 1   MTVNDRCFVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLE 60
           M  ND  FVEWKE FVSQERGNRVVHY+LKDS GES+LAV+GTERSVRHM YV +EEF+ 
Sbjct: 1   MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVR 60

Query: 61  ICGKEGCVPAGFKWRSRREVVDWLTSMLSKQLVQGERSGSP----GHNLALPHETSNGCE 116
           I G E  + +GFKWRSRREVVDWLTSMLSKQ  QG  S SP    G +   P   SNG  
Sbjct: 61  IHGPENSIHSGFKWRSRREVVDWLTSMLSKQSTQGNWSKSPKCESGESNGSPEFPSNGF- 119

Query: 117 NDGTALSAQIADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFV 176
              TA  AQ ++   + + N  + + +I+WSG  W CGKQLKHYP+FCRNG  I +QSFV
Sbjct: 120 ---TAQRAQASEEVRLPI-NLIIHSWEIMWSGAPWMCGKQLKHYPSFCRNGTTIGVQSFV 175

Query: 177 FVMGKEEKHFVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQV 236
           FV+ K E  +VAYLEDMYED+RG KKVKVRWFH+ +EVKGA+ ++NP+P+EVFIT +SQV
Sbjct: 176 FVLSKGEDRYVAYLEDMYEDKRGLKKVKVRWFHYTKEVKGAVALKNPNPKEVFITPHSQV 235

Query: 237 ISAECVDGLATVLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQS 296
           ISAECVDG ATVLTREHYE C+  F  +   R+H+C+RQ + +KVKPFDLSKLRGY  Q 
Sbjct: 236 ISAECVDGPATVLTREHYEECVASFPNSLLARVHMCYRQLRNSKVKPFDLSKLRGYLDQP 295

Query: 297 VLSCLHLDSNQKPEKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIR 356
           ++SCL        + + N+  + E+   G++  +GA+RS   R             +++ 
Sbjct: 296 IMSCLSSMEAGPVDCAMNIEED-EEWSEGENVMVGAERSMKKRA------------RIMS 342

Query: 357 SEQMMVHEMF-QVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFR 415
              +  +E   + +   +  +R  S   ++  P  N   K D KIE LCQDSGIRGCWFR
Sbjct: 343 DHLLTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFR 402

Query: 416 CTVVQVARKQLKVQYDDVQDEDGSGNLQ 443
           CTV+ V+RKQ+K+QYDD++DEDG GNL+
Sbjct: 403 CTVLDVSRKQVKLQYDDIEDEDGYGNLE 430


>AT1G68580.2 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr1:25752869-25755631 FORWARD LENGTH=648
          Length = 648

 Score =  182 bits (461), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 212/440 (48%), Gaps = 59/440 (13%)

Query: 11  WKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLEICGKEGCVPA 70
           W E+ V   +    VHYYL+   G + LAV+G  ++ + M +  A +      K      
Sbjct: 13  WNERHVKNTKEKMEVHYYLERKDGIADLAVIGRLKNSKRMSFRYALKKNRSVLK------ 66

Query: 71  GFKWRSRREVVDWLTSMLSKQLVQGERSGSPGHNLALPHETSNGCENDGTALSAQIADHK 130
             K  S+ +V  WL S++S         G   H   +P       +  G  +S  +    
Sbjct: 67  --KLNSKDDVALWLDSIVS---------GEIPHVADVPATVMTEKDAGGFNMSTFMNRKF 115

Query: 131 DILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEKHFVAYL 190
              +   K  +    W G +WTC K+ KHY ++ RNG++I++  FV+V+ ++ K  VAY+
Sbjct: 116 QEPIQQIKTFS----WMGFSWTCRKRRKHYQSYLRNGVRISVNDFVYVLAEQHKRLVAYI 171

Query: 191 EDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGLATVLT 250
           ED+YED +G+K V VRWFH  +EV G++   + + RE+F +   Q IS EC+D LATVL+
Sbjct: 172 EDLYEDSKGKKMVVVRWFHKTEEV-GSVLSDDDNDREIFFSLNRQDISIECIDYLATVLS 230

Query: 251 REHYERCMPYFSPTSTDRI-HLCFRQFKGNKVKPFDLSKLRGYYAQSVLSCLHLDSNQKP 309
            +HYE+ +    P     +   C + +  + +KP+D+++L GY+ Q +L  L++   +  
Sbjct: 231 PQHYEKFLKV--PMHVQTVAFFCQKLYGDDGLKPYDITQLEGYWRQEMLRYLNVSILKSF 288

Query: 310 EKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIRSEQMMVHEMFQVV 369
           E                    GA+   +D G     +G  G+R   R     V  +   V
Sbjct: 289 E--------------------GAQAPGTDPGLKAPLVGCVGIRSRKRRRPSPVGTLN--V 326

Query: 370 NYG---------SPDQRLLSLKQIEFQPWNNPT---YKVDDKIELLCQDSGIRGCWFRCT 417
           +Y          SPD  L       F+   + +    K    IE+L +DSGIRGCWF+  
Sbjct: 327 SYAGDMKGDCKSSPDSVLAVTDASIFKGDEDGSSHHIKKGSLIEVLSEDSGIRGCWFKAL 386

Query: 418 VVQVARKQLKVQYDDVQDED 437
           V++  + ++KVQY D+QD D
Sbjct: 387 VLKKHKDKVKVQYQDIQDAD 406


>AT1G68580.1 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr1:25753582-25755059 FORWARD LENGTH=396
          Length = 396

 Score =  168 bits (426), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 163/305 (53%), Gaps = 38/305 (12%)

Query: 146 WSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEKHFVAYLEDMYEDRRGQKKVKV 205
           W G +WTC K+ KHY ++ RNG++I++  FV+V+ ++ K  VAY+ED+YED +G+K V V
Sbjct: 31  WMGFSWTCRKRRKHYQSYLRNGVRISVNDFVYVLAEQHKRLVAYIEDLYEDSKGKKMVVV 90

Query: 206 RWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGLATVLTREHYERCMPYFSPTS 265
           RWFH  +EV G++   + + RE+F +   Q IS EC+D LATVL+ +HYE+ +    P  
Sbjct: 91  RWFHKTEEV-GSVLSDDDNDREIFFSLNRQDISIECIDYLATVLSPQHYEKFLKV--PMH 147

Query: 266 TDRI-HLCFRQFKGNKVKPFDLSKLRGYYAQSVLSCLHLDSNQKPEKSNNLAREDEDLGV 324
              +   C + +  + +KP+D+++L GY+ Q +L  L++   +  E              
Sbjct: 148 VQTVAFFCQKLYGDDGLKPYDITQLEGYWRQEMLRYLNVSILKSFE-------------- 193

Query: 325 GDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIRSEQMMVHEMFQVVNYG---------SPD 375
                 GA+   +D G     +G  G+R   R     V  +   V+Y          SPD
Sbjct: 194 ------GAQAPGTDPGLKAPLVGCVGIRSRKRRRPSPVGTL--NVSYAGDMKGDCKSSPD 245

Query: 376 QRLLSLKQIEFQPWNNPT---YKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDD 432
             L       F+   + +    K    IE+L +DSGIRGCWF+  V++  + ++KVQY D
Sbjct: 246 SVLAVTDASIFKGDEDGSSHHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQD 305

Query: 433 VQDED 437
           +QD D
Sbjct: 306 IQDAD 310