Miyakogusa Predicted Gene
- Lj0g3v0103029.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0103029.1 Non Chatacterized Hit- tr|I1LVC4|I1LVC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26386 PE,75.79,0,ATP
BINDING / DNA BINDING / HELICASE,NULL; SWI/SNF-RELATED
MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULAT,CUFF.5824.1
(318 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 412 e-115
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 344 4e-95
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 148 5e-36
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 147 1e-35
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 132 4e-31
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 128 6e-30
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 83 2e-16
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 83 2e-16
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 83 2e-16
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 83 2e-16
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 82 3e-16
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 81 7e-16
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 78 7e-15
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 73 3e-13
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 72 5e-13
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 72 5e-13
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 71 1e-12
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 71 1e-12
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 71 1e-12
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 70 2e-12
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 69 3e-12
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 69 4e-12
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 69 6e-12
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 66 3e-11
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 65 5e-11
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 65 7e-11
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 65 8e-11
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 65 8e-11
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 64 1e-10
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 64 1e-10
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 64 2e-10
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 64 2e-10
AT3G32330.1 | Symbols: | DNA repair protein-related | chr3:1327... 63 2e-10
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 61 1e-09
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 61 1e-09
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 61 1e-09
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 61 1e-09
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 60 2e-09
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 60 2e-09
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 60 2e-09
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 59 3e-09
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 59 3e-09
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 57 1e-08
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 57 2e-08
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 55 7e-08
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 54 1e-07
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 53 3e-07
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 52 5e-07
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 50 2e-06
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/293 (68%), Positives = 239/293 (81%), Gaps = 5/293 (1%)
Query: 25 FFDLVEDTLQKDPDFTRKISVIKDLREMTSKVLHYYKGDFLDELPGLVDYTVLLNLTPKQ 84
F + VE TLQK DFT KI VI+DLREMT KVLHYYKGDFLDELPGL D+TV+LNL+PKQ
Sbjct: 578 FNETVEHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTVVLNLSPKQ 637
Query: 85 KHEKEKLKNTSGFGKFKKSFVGSALYLHPRLKPVAEKKSGENCVSDQMVDDLIEKLDVKD 144
+E +KL+ KFK S VGSA+YLHP+LK ++K VSD +D+++EKLD+ +
Sbjct: 638 LNEVKKLRREKR--KFKVSAVGSAIYLHPKLKVFSDKSDD---VSDTTMDEMVEKLDLNE 692
Query: 145 GVKSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSE 204
GVK+KFFLN++NLC+S+GEKLLVFSQYL+P++FLERL KGW +GKE+F ++G++SSE
Sbjct: 693 GVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSE 752
Query: 205 QRELSMYKFNNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPG 264
QRE SM FN+SPDAK+ FGSIKACGEGISLVGASR+L+LDV LNPSVTRQAIGRAFRPG
Sbjct: 753 QREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPG 812
Query: 265 QTKKVFVYRLIAADSHEEDDHLTCFKKESISKMWFEWNEYCGDQAFKVENVSV 317
Q K V YRLIA S EE+DH TCFKKE ISKMWFEWNEYCG Q F+VE + V
Sbjct: 813 QKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKMWFEWNEYCGYQNFEVETIDV 865
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 344 bits (883), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/328 (54%), Positives = 235/328 (71%), Gaps = 21/328 (6%)
Query: 1 MKMERSRLIEKRIHSRVNISSKK-----------NFFDLVEDTLQKDPDFTRKISVIKDL 49
+K +R I RI S+ I K FF VE TLQ+ +F+ K S+IKDL
Sbjct: 460 LKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNFSAKASLIKDL 519
Query: 50 REMTSKVLHYYKGDFLDELPGLVDYTVLLNLTPKQKHEKEKLKNTSGFGKFKKSFVGSAL 109
REMT +LHY+K DF LPGL ++TV+LNL+ Q+ E + L+ FK+ +G+AL
Sbjct: 520 REMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVKGLRKME---LFKQISLGAAL 576
Query: 110 YLHPRLKPVAEKK--SGENCVSDQ-----MVDDLIEKLDVKDGVKSKFFLNILNLCESSG 162
Y+HP+LK E+ +GE SD +D +++K++V+DGVK KFFLN+L LCES+G
Sbjct: 577 YIHPKLKSFLEENPSNGEKGFSDNNTTVMKLDKMLKKINVRDGVKMKFFLNLLALCESTG 636
Query: 163 EKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVL 222
EKLLVFSQY++P++ LERL+ KGW +GKE+F I+GDSS+EQRE SM +FNNS +AKV
Sbjct: 637 EKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVF 696
Query: 223 FGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
FGSIKACGEGISLVGASRVL+LDVHLNPSVT+QA+ RA+RPGQ +KV+ Y+L+AADS EE
Sbjct: 697 FGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEE 756
Query: 283 DDHLTCFKKESISKMWFEWNEYCGDQAF 310
+++ TC +KE +SKMWFEWN G + F
Sbjct: 757 ENYETCTRKEMMSKMWFEWNVGSGREDF 784
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 146/259 (56%), Gaps = 8/259 (3%)
Query: 46 IKDLREMTSKVLHYYKGDFLDE-LPGLVDYTVLLNLTPKQKHEKEKLKNTSGFGKFKKSF 104
I DL+ M + +H ++G L E LPGL D V+LN +QK +++ + +F+
Sbjct: 826 IVDLKAMIAHFVHVHEGTILQESLPGLRDCVVVLNPPFQQKKILDRIDTSQNTFEFEHKL 885
Query: 105 VGSALYLHPRLKPVAEKKSGENCVSDQMVDDLIEKLDVK--DGVKSKFFLNILNLCESSG 162
SA+ +HP L E+ V +++L +K +GVK+KF ++ + + +
Sbjct: 886 --SAVSVHPSLYLCCNPTKKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVK 943
Query: 163 EKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDA--K 220
EK+LV+SQY+ ++ + ++ W+ G++I + G R+ + FN PD+ K
Sbjct: 944 EKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFN-KPDSGSK 1002
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
VL S KAC EGISLVGASRV++LDV NPSV QAI RAFR GQ + VF+Y L+ D+
Sbjct: 1003 VLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTS 1062
Query: 281 EEDDHLTCFKKESISKMWF 299
E + + +K IS++ F
Sbjct: 1063 EWNKYCKQSEKHRISELVF 1081
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 145/261 (55%), Gaps = 7/261 (2%)
Query: 46 IKDLREMTSKVLHYYKGDFLDE-LPGLVDYTVLLNLTPKQKHEKEKLK---NTSGFGKFK 101
I++L+ + +H +KG L LPGL + V+LN Q+ E ++ N F+
Sbjct: 1093 IEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVFE 1152
Query: 102 KSFVGSALYLHPRLKPVAEKKSGENCVSDQMVDDLIEK--LDVKDGVKSKFFLNILNLCE 159
S + +HP L + E D+ + ++K LD VK++F + + LCE
Sbjct: 1153 TEHKLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCE 1212
Query: 160 SSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPD- 218
EK+LVFSQY+ P++ + + ++ R W+ G+E+ + G +QR+ + +FN+
Sbjct: 1213 VIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSK 1272
Query: 219 AKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 278
AKV S KAC EGISLVGASRV++LDV NP+V RQAI RA+R GQ + V+ Y L+A
Sbjct: 1273 AKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKG 1332
Query: 279 SHEEDDHLTCFKKESISKMWF 299
+ E + +K+ IS++ F
Sbjct: 1333 TPEGPKYCKQAQKDRISELVF 1353
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 154/312 (49%), Gaps = 29/312 (9%)
Query: 21 SKKNFFDLVE---DTLQKDPDFTRKISVIKDLREMTSKVLHYYKGDFL---DELPGLVDY 74
++K F D++ DT D ++ + LR MTS + Y+G D LPGL Y
Sbjct: 928 ARKFFLDIIAKKIDTKVGD----ERLQGLNMLRNMTSGFIDNYEGSGSGSGDVLPGLQIY 983
Query: 75 TVLLNLTPKQKHEKEKLKN---TSGFGKFKKSFVGSALYLHPRLKPVAEKKSGENCVSDQ 131
T+L+N T Q KL+N T + + + +HP L K+ C
Sbjct: 984 TLLMNSTDVQHKSLTKLQNIMSTYHGYPLELELLITLAAIHPWLV-----KTTTCCAKFF 1038
Query: 132 MVDDLIE----KLDVKDGVKSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKG 187
+L+E K D K G K F LN++ EK+L+F + P+R L
Sbjct: 1039 NPQELLEIEKLKHDAKKGSKVMFVLNLV-FRVVKREKILIFCHNIAPIRLFLELFENVFR 1097
Query: 188 WSVGKEIFEISGDSSSEQRELSMYKFNN-SPDAKVLFGSIKACGEGISLVGASRVLVLDV 246
W G+E+ ++GD +R + KF ++VL SI AC EGISL ASRV++LD
Sbjct: 1098 WKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDS 1157
Query: 247 HLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEEDDHLTCFKKESISKMWFEWNEYCG 306
NPS T+QAI RAFRPGQ K V+VY+L++ + EED + KE +S M F E+
Sbjct: 1158 EWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFS-EEFVE 1216
Query: 307 D----QAFKVEN 314
D QA K+E+
Sbjct: 1217 DPSQWQAEKIED 1228
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 24/282 (8%)
Query: 49 LREMTSKVLHYYKGDFL---DELPGLVDYTVLLNLTPKQKHEKEKLKNTSGFGKFKKSFV 105
L+ MT+ + Y+G D LPGL YT+++N T Q KL++ K++
Sbjct: 961 LKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHKILTKLQDVI------KTYF 1014
Query: 106 GSALYLHPRLKPVAEKK---SGENCVS----DQMVDDLIE-KLDVKDGVKSKFFLNILNL 157
G L + ++ A + NC + Q + ++ + K D K G K F LN++
Sbjct: 1015 GYPLEVELQITLAAIHPWLVTSSNCCTKFFNPQELSEIGKLKHDAKKGSKVMFVLNLI-F 1073
Query: 158 CESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSP 217
EK+L+F + P+R L W G+EI ++GD +R + KF
Sbjct: 1074 RVVKREKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERGRVIDKFEEPG 1133
Query: 218 D-AKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIA 276
+ ++VL SI AC EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L++
Sbjct: 1134 NPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLS 1193
Query: 277 ADSHEEDDHLTCFKKESISKMWFEWNEYCGD----QAFKVEN 314
+ EED + KE +S M F E+ D QA K+E+
Sbjct: 1194 RGTLEEDKYRRTTWKEWVSCMIFS-EEFVADPSLWQAEKIED 1234
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 11/143 (7%)
Query: 150 FFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMK--RKG-----WSVGKEIFEISGDSS 202
L+IL++ G+K LVFSQ + + +E + + R G W GK+ + I G +
Sbjct: 1098 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1157
Query: 203 SEQRELSMYKFNNSPD---AKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGR 259
S +R+ + +FN PD K S +A GI+L A+RV+++D NP+ QAI R
Sbjct: 1158 SSERQKLVDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFR 1216
Query: 260 AFRPGQTKKVFVYRLIAADSHEE 282
A+R GQ K VF YRL+A + EE
Sbjct: 1217 AWRYGQKKPVFAYRLMARGTIEE 1239
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 11/143 (7%)
Query: 150 FFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMK--RKG-----WSVGKEIFEISGDSS 202
L+IL++ G+K LVFSQ + + +E + + R G W GK+ + I G +
Sbjct: 1119 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1178
Query: 203 SEQRELSMYKFNNSPD---AKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGR 259
S +R+ + +FN PD K S +A GI+L A+RV+++D NP+ QAI R
Sbjct: 1179 SSERQKLVDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFR 1237
Query: 260 AFRPGQTKKVFVYRLIAADSHEE 282
A+R GQ K VF YRL+A + EE
Sbjct: 1238 AWRYGQKKPVFAYRLMARGTIEE 1260
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 11/143 (7%)
Query: 150 FFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMK--RKG-----WSVGKEIFEISGDSS 202
L+IL++ G+K LVFSQ + + +E + + R G W GK+ + I G +
Sbjct: 1119 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1178
Query: 203 SEQRELSMYKFNNSPD---AKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGR 259
S +R+ + +FN PD K S +A GI+L A+RV+++D NP+ QAI R
Sbjct: 1179 SSERQKLVDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFR 1237
Query: 260 AFRPGQTKKVFVYRLIAADSHEE 282
A+R GQ K VF YRL+A + EE
Sbjct: 1238 AWRYGQKKPVFAYRLMARGTIEE 1260
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 11/143 (7%)
Query: 150 FFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMK--RKG-----WSVGKEIFEISGDSS 202
L+IL++ G+K LVFSQ + + +E + + R G W GK+ + I G +
Sbjct: 1119 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1178
Query: 203 SEQRELSMYKFNNSPD---AKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGR 259
S +R+ + +FN PD K S +A GI+L A+RV+++D NP+ QAI R
Sbjct: 1179 SSERQKLVDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFR 1237
Query: 260 AFRPGQTKKVFVYRLIAADSHEE 282
A+R GQ K VF YRL+A + EE
Sbjct: 1238 AWRYGQKKPVFAYRLMARGTIEE 1260
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 141 DVKDGVKSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGD 200
DVK K + ++ S G+K+L+FS + + LE+ ++ RKG+S + + G
Sbjct: 523 DVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLI-RKGYSFAR----LDGS 577
Query: 201 SSSEQRELSMYKFNNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRA 260
+ + R+ + FN SP +V S KA G G++LV A+RV++ D + NPS QA R+
Sbjct: 578 TPTNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRS 637
Query: 261 FRPGQTKKVFVYRLIAADSHEE 282
FR GQ + V V+RL++A S EE
Sbjct: 638 FRYGQKRHVVVFRLLSAGSLEE 659
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 43/261 (16%)
Query: 28 LVEDTLQKDPDFTRKISVIKDLREMTSKVLHYYKGDFLDELPGLVDYTVLLNLTPKQKHE 87
L +D +Q P T ++ + E+TS YY+ +Y +L N+
Sbjct: 914 LKKDAMQNIPPKTERMVPV----ELTSIQAEYYRAMLTK------NYQILRNI------- 956
Query: 88 KEKLKNTSGFGKFKKSFVGSALYL-----HPRLKPVAEKKSGENCVSDQMVDDLIEKLDV 142
G G ++S + + L HP L P E +SG + + + +
Sbjct: 957 --------GKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSL--------EFLHDMRI 1000
Query: 143 KDGVKSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFE-ISGDS 201
K K ++L + G ++L+FSQ + LE + G + FE + G
Sbjct: 1001 KASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYL----NIEFGPKTFERVDGSV 1056
Query: 202 SSEQRELSMYKFNNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAF 261
+ R+ ++ +FN + V S +ACG GI+L A V++ D NP QA+ RA
Sbjct: 1057 AVADRQAAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1116
Query: 262 RPGQTKKVFVYRLIAADSHEE 282
R GQ+K++ VYRL+ S EE
Sbjct: 1117 RIGQSKRLLVYRLVVRASVEE 1137
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 161 SGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAK 220
SGEK +VFSQ+ + LE + ++R+G+ E G + + RE + +FN +
Sbjct: 1126 SGEKSIVFSQWTSFLDLLE-IPLRRRGF----EFLRFDGKLAQKGREKVLKEFNETKQKT 1180
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
+L S+KA G G++L AS V ++D NP+V QAI R R GQ + VFV R I D+
Sbjct: 1181 ILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTV 1240
Query: 281 EE 282
EE
Sbjct: 1241 EE 1242
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 162 GEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKV 221
G + L+F+Q + LE + G + G + E+R+ M +FN +P +
Sbjct: 1091 GHRALIFTQMTKMLDVLEAFINL-----YGYTYMRLDGSTPPEERQTLMQRFNTNPKIFL 1145
Query: 222 LFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHE 281
S ++ G GI+LVGA V+ D NP++ +QA R R GQT++V +YRLI+ + E
Sbjct: 1146 FILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIE 1205
Query: 282 ED 283
E+
Sbjct: 1206 EN 1207
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 161 SGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAK 220
+GEK +VFSQ+ + LE ++ S + + G S R+ ++ FN P+
Sbjct: 1122 AGEKAIVFSQWTKMLNLLEASLV-----SSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1176
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
V+ S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1177 VMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTV 1236
Query: 281 EE 282
E+
Sbjct: 1237 ED 1238
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 161 SGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAK 220
+GEK +VFSQ+ + LE ++ S + + G S R+ ++ FN P+
Sbjct: 964 AGEKAIVFSQWTKMLNLLEASLV-----SSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT 1018
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
V+ S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1019 VMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTV 1078
Query: 281 EE 282
E+
Sbjct: 1079 ED 1080
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 161 SGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAK 220
+GEK +VF+Q+ + LE + S G + G + R+ ++ FN PD
Sbjct: 1113 AGEKAIVFTQWTKMLDLLEAGLK-----SSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS 1167
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
V+ S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1168 VMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTV 1227
Query: 281 EE 282
E+
Sbjct: 1228 ED 1229
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 161 SGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAK 220
+GEK +VF+Q+ + LE + S G + G + R+ ++ FN PD
Sbjct: 1070 AGEKAIVFTQWTKMLDLLEAGLK-----SSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS 1124
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
V+ S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V R D+
Sbjct: 1125 VMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTV 1184
Query: 281 EE 282
E+
Sbjct: 1185 ED 1186
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 146 VKSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWS---VGKEIFEISGDSS 202
K + +L + SG ++L+FSQ+ + LE W+ +G + G +
Sbjct: 588 AKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILE--------WTLDVIGVTYRRLDGSTQ 639
Query: 203 SEQRELSMYKFNNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFR 262
R+ + FNN S +A G+G++L GA V++ D+ NP + RQA R R
Sbjct: 640 VTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHR 699
Query: 263 PGQTKKVFVYRLIAADSHEED 283
GQTK V ++RL+ + +E+
Sbjct: 700 IGQTKPVTIFRLVTKSTVDEN 720
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 147 KSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQR 206
K K +L + + G ++L+FSQ + LE ++ + +S + + G + +QR
Sbjct: 728 KMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANE-YSYRR----MDGLTPVKQR 782
Query: 207 ELSMYKFNNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQT 266
+ +FNNS D V + K G G +L GA+RV++ D NPS QA RA+R GQ
Sbjct: 783 MALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQK 842
Query: 267 KKVFVYRLIAADSHEE 282
K V VYRLI + EE
Sbjct: 843 KDVTVYRLITRGTIEE 858
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
K ++FSQ+ + +E +++ G E + G S R+ ++ +F+ PD KV+
Sbjct: 894 KTIIFSQWTGMLDLVELRILES-----GIEFRRLDGTMSLAARDRAVKEFSKKPDVKVML 948
Query: 224 GSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V R+ D+ E+
Sbjct: 949 MSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVED 1007
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 125 ENCVSDQMVDDLIEKLDVKD--------GVKSKFFLNILNLCESSGEKLLVFSQYLLPMR 176
E V++++ + + +D D K F +++L G ++L+FSQ +
Sbjct: 703 EAGVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLN 762
Query: 177 FLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLFGSIKACGEGISLV 236
++ + S G I G + + R ++ +F A + + + G G++L
Sbjct: 763 LIQDSLT-----SNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLT 817
Query: 237 GASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
A RV+V+D NPS Q++ RA+R GQTK V VYRL+ + + EE
Sbjct: 818 KADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEE 863
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 160 SSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDA 219
SSG K ++FSQ+ + L+ + + R +S + G S +QRE + +F+
Sbjct: 877 SSGSKSILFSQWTAFLDLLQ-IPLSRNNFS----FVRLDGTLSQQQREKVLKEFSEDGSI 931
Query: 220 KVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADS 279
VL S+KA G GI+L AS V+D NP+V QA+ R R GQTK+V + R I +
Sbjct: 932 LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGT 991
Query: 280 HEE 282
EE
Sbjct: 992 VEE 994
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 162 GEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKV 221
G ++L+++Q+ + LE +K W + I G +R++ + +FN K
Sbjct: 611 GHRVLIYTQFQHMLDLLEDYCTHKK-WQYER----IDGKVGGAERQIRIDRFNAKNSNKF 665
Query: 222 LFG-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
F S +A G GI+L A V++ D NP QA+ RA R GQT KV +YRLI +
Sbjct: 666 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTI 725
Query: 281 EE 282
EE
Sbjct: 726 EE 727
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
K ++FSQ+ + +E +++ E + G S R+ ++ +F+N PD KV+
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENS-----IEFRRLDGTMSLIARDRAVKEFSNDPDVKVMI 882
Query: 224 GSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S+KA G++++ A V++LD+ NP+ QAI RA R GQT+ V V R+ ++ E+
Sbjct: 883 MSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVED 941
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 162 GEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKV 221
G ++L+++Q+ + LE K W+ + I G S +R++ + +FN +
Sbjct: 499 GHRVLIYTQFQHTLYLLEDY-FTFKNWNYER----IDGKISGPERQVRIDRFNAENSNRF 553
Query: 222 LFG-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
F S +A G GI+L A V++ D NP QA+ R R GQT KV +YRLI +
Sbjct: 554 CFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTV 613
Query: 281 EE 282
EE
Sbjct: 614 EE 615
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 159 ESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNS-- 216
E+ K +VFSQ+ + LE +K G++ I + G + ++R + +F N
Sbjct: 703 ENPNTKSVVFSQFRKMLLLLET-PLKAAGFT----ILRLDGAMTVKKRTQVIGEFGNPEL 757
Query: 217 PDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIA 276
VL S+KA G GI+L ASRV + D NP+V QA+ R R GQ ++V + R+IA
Sbjct: 758 TGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIA 817
Query: 277 ADSHEEDDHLTCFKKESISKMWFEWNEYCGDQAFKVENV 315
+S EE KK++++ F+ + ++ VE+V
Sbjct: 818 RNSIEERVLELQQKKKNLANEAFKRRQKKDEREVNVEDV 856
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 162 GEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKV 221
G ++L+++Q+ + LE K W+ + I G S +R++ + +FN +
Sbjct: 540 GHRVLIYTQFQHTLYLLEDY-FTFKNWNYER----IDGKISGPERQVRIDRFNAENSNRF 594
Query: 222 LFG-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
F S +A G GI+L A V++ D NP QA+ R R GQT KV +YRLI +
Sbjct: 595 CFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTV 654
Query: 281 EE 282
EE
Sbjct: 655 EE 656
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
K +VFSQ+ + + + K G ++ G + R+ ++ KF PD +V
Sbjct: 682 KAIVFSQFTSFLDLINYTLGK-----CGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFL 736
Query: 224 GSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S+KA G ++L AS V ++D NP+V RQA R R GQ K + V R I ++ EE
Sbjct: 737 MSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEE 795
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 154 ILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKF 213
+ NL + +++++ S Y + +L +R+ + G ++ +R+ + +
Sbjct: 543 LANLRRKTDDRIVLVSNYTQTLDLFAQLCRERR-----YPFLRLDGSTTISKRQKLVNRL 597
Query: 214 NN-SPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVY 272
N+ + D S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+V+VY
Sbjct: 598 NDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVY 657
Query: 273 RLIAADSHEEDDHLTCFKKESISKM 297
R ++ + EE + KE + K+
Sbjct: 658 RFLSTGTIEEKVYQRQMSKEGLQKV 682
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 154 ILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKF 213
+ NL + +++++ S Y + +L +R+ + G ++ +R+ + +
Sbjct: 541 LANLRRKTDDRIVLVSNYTQTLDLFAQLCRERR-----YPFLRLDGSTTISKRQKLVNRL 595
Query: 214 NN-SPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVY 272
N+ + D S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+V+VY
Sbjct: 596 NDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVY 655
Query: 273 RLIAADSHEEDDHLTCFKKESISKM 297
R ++ + EE + KE + K+
Sbjct: 656 RFLSTGTIEEKVYQRQMSKEGLQKV 680
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
K +VFSQ+ FL+ L+ G S G ++ G S ++ ++ F PD +VL
Sbjct: 527 KAIVFSQF---TSFLD-LISYALGKS-GVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLL 581
Query: 224 GSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S++A G ++L AS V ++D NP+V RQA R R GQ K V V R I + EE
Sbjct: 582 MSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEE 640
>AT3G32330.1 | Symbols: | DNA repair protein-related |
chr3:13276082-13277155 FORWARD LENGTH=327
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Query: 22 KKNFFDLVEDTL-QKDPDFTRKISVIKDLREMTSKVLHYYKGDFLDELPGLVDYTVLLNL 80
K FD +E+ L +D D KI + +L+ +T+KV++ +KG+ L E+PGL+D+TV+L
Sbjct: 213 KMPLFDKLEEALLSQDSDHGDKICYLTELKMLTNKVIYNHKGECLLEVPGLMDFTVVLKP 272
Query: 81 TPKQKHEKEKLKNTSGFGKFKKSFVGSALYLHPRLKPVAEKKSGENCVSDQMVDDL 136
T QK E + ++G G FKK S + LHP L +++ G ++ +D++
Sbjct: 273 TSSQKSAWEVERKSNGKG-FKKYSTLSGIMLHPLLCAFSDRAKGLPAPNEDEMDEM 327
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 154 ILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKF 213
+L + ++L+F+Q + LE + RK + + G S+ R + F
Sbjct: 1214 LLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRK-----YKYLRLDGSSTIMDRRDMVRDF 1268
Query: 214 NNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYR 273
+ D V S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VYR
Sbjct: 1269 QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYR 1328
Query: 274 LIAADSHEEDDHLTCFKKESISKMWFEWNEYCGDQAFKVENV 315
LI ++ EE +K ++ ++ GD +V
Sbjct: 1329 LICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADV 1370
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 154 ILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKF 213
+L + ++L+F+Q + LE + RK + + G S+ R + F
Sbjct: 1247 LLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRK-----YKYLRLDGSSTIMDRRDMVRDF 1301
Query: 214 NNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYR 273
+ D V S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VYR
Sbjct: 1302 QHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYR 1361
Query: 274 LIAADSHEEDDHLTCFKKESISKMWFEWNEYCGDQAFKVENV 315
LI ++ EE +K ++ ++ GD +V
Sbjct: 1362 LICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADV 1403
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
++L+FSQ + LE +M R G + I G++ ++R+ S+ +N K +F
Sbjct: 513 RVLIFSQMTRLLDILEDYLMYR-----GYQYCRIDGNTGGDERDASIEAYNKPGSEKFVF 567
Query: 224 G-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHE 281
S +A G GI+L A V++ D NP V QA RA R GQ K+V V+R ++ E
Sbjct: 568 LLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIE 626
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
++L+FSQ + LE +M R G + I G++ ++R+ S+ +N K +F
Sbjct: 513 RVLIFSQMTRLLDILEDYLMYR-----GYQYCRIDGNTGGDERDASIEAYNKPGSEKFVF 567
Query: 224 G-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHE 281
S +A G GI+L A V++ D NP V QA RA R GQ K+V V+R ++ E
Sbjct: 568 LLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIE 626
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
++L+FSQ + LE +M R G I G++ ++R+ S+ +N K +F
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYR-----GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVF 562
Query: 224 G-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S +A G GI+L A V++ D NP V QA RA R GQ K+V V+R + EE
Sbjct: 563 LLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEE 622
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
++L+FSQ + LE +M R G I G++ ++R+ S+ +N K +F
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYR-----GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVF 562
Query: 224 G-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S +A G GI+L A V++ D NP V QA RA R GQ K+V V+R + EE
Sbjct: 563 LLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEE 622
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAKVLF 223
++L+FSQ + LE +M R G I G++ ++R+ S+ +N K +F
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYR-----GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVF 562
Query: 224 G-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S +A G GI+L A V++ D NP V QA RA R GQ K+V V+R + EE
Sbjct: 563 LLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEE 622
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 22/144 (15%)
Query: 154 ILNLCESSGEKLLVFSQYLLPMRFLE------RLVMKRKGWSVGKEIFEISGDSSSEQRE 207
IL + +G ++L+FS + LE RLV +R I G +S E RE
Sbjct: 1316 ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRR-----------IDGTTSLEDRE 1364
Query: 208 LSMYKFNN-SPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQT 266
++ FN+ D + SI+A G G++L A V++ D NP QA+ RA R GQT
Sbjct: 1365 SAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQT 1424
Query: 267 KKVFVYRLIAA----DSHEEDDHL 286
++V V + A SH+++D L
Sbjct: 1425 REVKVIYMEAVVEKLSSHQKEDEL 1448
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 59.3 bits (142), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 22/144 (15%)
Query: 154 ILNLCESSGEKLLVFSQYLLPMRFLE------RLVMKRKGWSVGKEIFEISGDSSSEQRE 207
IL + +G ++L+FS + LE RLV +R I G +S E RE
Sbjct: 1315 ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRR-----------IDGTTSLEDRE 1363
Query: 208 LSMYKFNN-SPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQT 266
++ FN+ D + SI+A G G++L A V++ D NP QA+ RA R GQT
Sbjct: 1364 SAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQT 1423
Query: 267 KKVFVYRLIAA----DSHEEDDHL 286
++V V + A SH+++D L
Sbjct: 1424 REVKVIYMEAVVEKLSSHQKEDEL 1447
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 164 KLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNN-SPDAKVL 222
++L+FSQ + + L + R G + + G + +E R+ +M FN + D
Sbjct: 957 RVLIFSQMVRMLDILAEYLSLR-----GFQFQRLDGSTKAELRQQAMDHFNAPASDDFCF 1011
Query: 223 FGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
S +A G GI+L A V++ D NP QA+ RA R GQ + V +YR + + S EE
Sbjct: 1012 LLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEE 1071
Query: 283 D 283
+
Sbjct: 1072 E 1072
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 160 SSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDA 219
++ K+L+FSQ+ + ++ ++ G E+ I G ++R + F++ +
Sbjct: 538 ANNHKVLIFSQWTKLLDIMDYYFSEK-----GFEVCRIDGSVKLDERRRQIKDFSDEKSS 592
Query: 220 KVLFG-SIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 278
+F S +A G GI+L A ++ D NP + QA+ R R GQTK V VYRL A
Sbjct: 593 CSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQ 652
Query: 279 SHE 281
S E
Sbjct: 653 SIE 655
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 135 DLIEKLDVKDGV-KSKFFLNILNLCESSGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKE 193
+LI K+ V K L+ L +G K LVF+ + + L + + K+K VG
Sbjct: 456 NLINKIYTDSAVAKIPAVLDYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKK---VG-- 510
Query: 194 IFEISGDSSSEQRELSMYKFNNSPDAKVLFGSIKACGEGISLVGASRVLVLDVHLNPSVT 253
I G + + R+ + F + + K SI+A G GI+L AS V+ ++ P
Sbjct: 511 CIRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDL 570
Query: 254 RQAIGRAFRPGQTKKVFVYRLIAADS 279
QA RA R GQ V ++ L+A D+
Sbjct: 571 IQAEDRAHRIGQVSSVNIHYLLANDT 596
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 36/232 (15%)
Query: 68 LPGLVDYTVLLNLTPKQKH--------EKEKLKNTSGFGKFKKSFVGSALYL-----HPR 114
LP L + TV++ L QK E L S G S + L HP
Sbjct: 288 LPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPY 347
Query: 115 LKPVAEKKS---GENCVSDQMVDDLIEKLDVKDGVKSKFFLNILNLCESSGEKLLVFSQY 171
L P E + GE+ V KL V D +L SG ++L+FSQ
Sbjct: 348 LFPGIEPEPFEEGEHLVQAS------GKLLVLD--------QLLKRLHDSGHRVLLFSQM 393
Query: 172 LLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFN-NSPDAKVLFGSIKACG 230
+ L+ M+ + +S + + G +E+R ++ F+ + +A V S +A G
Sbjct: 394 TSTLDILQDF-MELRRYSYER----LDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGG 448
Query: 231 EGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSHEE 282
G++LV A V+ + NP V +QA+ RA R GQ V L+ S EE
Sbjct: 449 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEE 500
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
+ S+KA G+++V AS V++LD+ NP+ QAI RA R GQT+ V V R+ ++
Sbjct: 509 AMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTV 568
Query: 281 EEDDHLTCFKKESISKMWF---EWNEYCGDQAFKVENVSV 317
EE +K +I W ++C + +SV
Sbjct: 569 EERILTLHERKRNIVASALGEKNWQKFCDSTNTRRSRISV 608
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 161 SGEKLLVFSQYLLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFNNSPDAK 220
S K++VF+ + + ++ + + G I G + R+L++ F S + K
Sbjct: 553 SSTKMVVFAHHHKVLDGIQEFICDK-----GIGFVRIDGTTLPRDRQLAVQSFQFSSEVK 607
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
+ ++A G G+ A V+ L++ PS+ QA RA R GQT V VY A D+
Sbjct: 608 IAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTM 667
Query: 281 EEDD 284
+E +
Sbjct: 668 DESN 671
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 97/242 (40%), Gaps = 46/242 (19%)
Query: 68 LPGLVDYTVLLNLTPKQKH--------EKEKLKNTSGFGKFKKSFVGSALYL-----HPR 114
LP L + TV++ L QK E L S G S + L HP
Sbjct: 297 LPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPY 356
Query: 115 LKPVAEKKS---GENCVSDQMVDDLIEKLDVKDGVKSKFFLNILNLCESSGEKLLVFSQY 171
L P E + GE+ V KL V D +L SG ++L+FSQ
Sbjct: 357 LFPGIEPEPFEEGEHLVQAS------GKLLVLD--------QLLKRLHDSGHRVLLFSQM 402
Query: 172 LLPMRFLERLVMKRKGWSVGKEIFEISGDSSSEQRELSMYKFN-----------NSPDAK 220
+ L+ M+ + +S + + G +E+R ++ F+ + +A
Sbjct: 403 TSTLDILQDF-MELRRYSYER----LDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAF 457
Query: 221 VLFGSIKACGEGISLVGASRVLVLDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSH 280
V S +A G G++LV A V+ + NP V +QA+ RA R GQ V L+ S
Sbjct: 458 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSV 517
Query: 281 EE 282
EE
Sbjct: 518 EE 519