Miyakogusa Predicted Gene
- Lj0g3v0102829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0102829.1 Non Chatacterized Hit- tr|I1KUX5|I1KUX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8673
PE=,88.26,0,Aminoacid dehydrogenase-like, N-terminal domain,NULL;
NAD(P)-binding Rossmann-fold domains,NULL; SUB,CUFF.5806.1
(622 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51720.1 | Symbols: | Amino acid dehydrogenase family protei... 969 0.0
AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6... 140 2e-33
AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2... 139 4e-33
AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2... 139 4e-33
AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1... 135 6e-32
AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2... 117 2e-26
>AT1G51720.1 | Symbols: | Amino acid dehydrogenase family protein |
chr1:19181741-19186297 FORWARD LENGTH=637
Length = 637
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/628 (72%), Positives = 537/628 (85%), Gaps = 6/628 (0%)
Query: 1 MNSAMNDMNLIQQSQRHHLVMKEIGDEIDLEIGPGEEDPSFGNATLISVPMQESSTEDHG 60
MN +M+DMNLIQQ+QRH LV+ +G+EIDLEIGPGE+D +F N +LI P +E ST +H
Sbjct: 10 MNPSMDDMNLIQQAQRHQLVVSNLGEEIDLEIGPGEDDAAFANNSLIGGPPREPSTGEHD 69
Query: 61 ENKQMVVAPHLLNDTQDMSATQPGXXXXXXXXXXXXXXADTYKWAFLDVRDGTPRIFCSV 120
E K MV+ L ++ QD+S P ADTYKWA++D++DGT RIFCS+
Sbjct: 70 ETKHMVLVSDLPSEDQDISKGTPAKRKKKVVKRWREEWADTYKWAYVDMKDGTARIFCSI 129
Query: 121 CKEYGRRHRRNPYGNEGSRNMQMSALEEHNNSLLHKEAVRLQTASKDKIMVEKPIYVK-- 178
C+EYGR+HRRNPYGNEGSRNMQMSALEEHNNSLLHKEA+RLQTASKDKI+V+KPIYVK
Sbjct: 130 CREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQTASKDKIVVDKPIYVKTV 189
Query: 179 ----AGSILEATLKRDPHEVEFIQAIQQAVQSLERVIAKNSHYINIMERLLEPERMIVFR 234
AGSI+E LKRDP+E+EF+Q++Q++V +LERVIAKNSHY+NIMERLLEPERMIVFR
Sbjct: 190 MSKSAGSIVEGALKRDPNEIEFVQSVQESVHALERVIAKNSHYVNIMERLLEPERMIVFR 249
Query: 235 VPWVDDRGETHVNRGFRVQFNQSTGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKL 294
VPW+DDRGETHVNRGFRVQFNQ+ GPCRGGIRFHPSMNLSIAKFLGF+QTLKNALSPYKL
Sbjct: 250 VPWIDDRGETHVNRGFRVQFNQALGPCRGGIRFHPSMNLSIAKFLGFQQTLKNALSPYKL 309
Query: 295 GGAAGGSDFDPKGKSDNEIMRFCQSFMSEIYRYLGPDKDLLSEEMGVGTREMGYLLGQYR 354
GGA+GGSDFDPKGKSDNEIMRFCQSFM+E+YRY+GPDKDL SEE+GVGTREMGYL GQYR
Sbjct: 310 GGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGPDKDLPSEEVGVGTREMGYLFGQYR 369
Query: 355 RVAGLVQGGFTGQRTLWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIA 414
R+AG QG FTG R W+ SSLR EA+GYG+V+FA+L+LADMNKE+KGLRCVVSG GKIA
Sbjct: 370 RLAGQFQGSFTGPRIYWAASSLRTEASGYGVVYFARLILADMNKEIKGLRCVVSGCGKIA 429
Query: 415 IYVLEKLIAYGAVPISVSDSRGYLVDEDGFDYLKVSLLRDIKAQQRSLRDYSKTYARSKY 474
++V+EKLIA GA P++VSDS+GYLVD+DGFDY+K++ LRDIK+QQRSLRDYSKTYAR+KY
Sbjct: 430 MHVVEKLIACGAHPVTVSDSKGYLVDDDGFDYMKLAFLRDIKSQQRSLRDYSKTYARAKY 489
Query: 475 YDEAKPWSERCDLAFACASQNEIDQSDAINLVNSGCCILVEGSNMPCTPDAVQVLRKANV 534
+DE KPW+ERCD+AF CASQNE+DQ+DAINLVN+GC +LVEGSNMPCT +AV V RKANV
Sbjct: 490 FDELKPWNERCDVAFPCASQNEVDQADAINLVNAGCRLLVEGSNMPCTAEAVDVFRKANV 549
Query: 535 LIAPAMXXXXXXXXXXELELNHDCSLMHWSPEDFESKLQVAMKQTYDRAIKASTDFGYPK 594
LIAPA+ E+E+ + + M WS EDFES+LQ A+KQTY++A+KA+ DFGY K
Sbjct: 550 LIAPAIAAGAGGVAAGEIEVLRESNSMQWSAEDFESRLQEALKQTYEKALKAANDFGYQK 609
Query: 595 ESPEALAHGAVISAFLTIAQAMTDQGCV 622
ESPEAL HGA I+AFL IAQAMTDQGCV
Sbjct: 610 ESPEALLHGATIAAFLNIAQAMTDQGCV 637
>AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 |
chr5:6006172-6008248 FORWARD LENGTH=411
Length = 411
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 161/365 (44%), Gaps = 22/365 (6%)
Query: 222 ERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFNQSTGPCRGGIRFHPSMNLSIAKFLGF 281
+ LL P R I D G GFRVQ + + GP +GGIR+HP ++ L
Sbjct: 26 KSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQ 85
Query: 282 EQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEIYRYLGPDKDLLSEEMGV 341
T K A++ GGA GG DP S +E+ R + F +I+ +G D+ + +MG
Sbjct: 86 LMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGT 145
Query: 342 GTREMGYLLGQYRRVAGLVQGGFTGQRTLWSGSSLRPEATGYGLVFFAQLMLADMNKELK 401
G + M ++L +Y + G TG+ GS R ATG G++F + +L + K +
Sbjct: 146 GPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEHGKTIS 205
Query: 402 GLRCVVSGSGKIAIYVLEKLIAYGAVPISVSDSRGYLVDEDGFDYLKVSLLRDIKAQQRS 461
G R V+ G G + + + + G ++VSD G + ++DG D +
Sbjct: 206 GQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDI-------------PA 252
Query: 462 LRDYSKTYARSKYYDEAKPWS------ERCDLAFACASQNEIDQSDAINLVNSGCCILVE 515
L ++K + K +D A P E CD+ A I++ +A + ++E
Sbjct: 253 LLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENANEIKAK---FIIE 309
Query: 516 GSNMPCTPDAVQVLRKANVLIAPAMXXXXXXXXXXELELNHDCSLMHWSPEDFESKLQVA 575
+N P PDA ++L K V+I P + E + W E +L+
Sbjct: 310 AANHPTDPDADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEEKVNDELKTY 369
Query: 576 MKQTY 580
M +++
Sbjct: 370 MTRSF 374
>AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 |
chr5:2356153-2358012 FORWARD LENGTH=411
Length = 411
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 172/384 (44%), Gaps = 13/384 (3%)
Query: 197 IQAIQQAVQSLERVIAKNSHYINIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFNQ 256
+ A + + R++ +S I L+ P R I D G GFRVQ +
Sbjct: 4 LAATNRNFRHASRILGLDS---KIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60
Query: 257 STGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRF 316
+ GP +GGIR+HP ++ L T K A++ GGA GG P+ S +E+ R
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120
Query: 317 CQSFMSEIYRYLGPDKDLLSEEMGVGTREMGYLLGQYRRVAGLVQGGFTGQRTLWSGSSL 376
+ F +I+ +G D+ + +MG + M ++L +Y + G TG+ GS
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 377 RPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAIYVLEKLIAYGAVPISVSDSRG 436
R ATG G+VF + +LA+ K ++GL V+ G G + + + + G ++VSD G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240
Query: 437 YLVDEDGFDYLKVSLLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDLAFACASQNE 496
+ + +G D ++ L K SL D++ A + DE CD+ CA
Sbjct: 241 AIRNPEGID---INALIKHKDATGSLNDFNGGDAMNS--DEL--LIHECDVLIPCALGGV 293
Query: 497 IDQSDAINLVNSGCCILVEGSNMPCTPDAVQVLRKANVLIAPAMXXXXXXXXXXELELNH 556
+++ +A ++ +VE +N P PDA ++L K V+I P + E
Sbjct: 294 LNKENAGDVKAK---FIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQ 350
Query: 557 DCSLMHWSPEDFESKLQVAMKQTY 580
+ W E +LQ M + +
Sbjct: 351 NIQGFMWEEEKVNLELQKYMTRAF 374
>AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 |
chr5:2356153-2358012 FORWARD LENGTH=411
Length = 411
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 172/384 (44%), Gaps = 13/384 (3%)
Query: 197 IQAIQQAVQSLERVIAKNSHYINIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFNQ 256
+ A + + R++ +S I L+ P R I D G GFRVQ +
Sbjct: 4 LAATNRNFRHASRILGLDS---KIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60
Query: 257 STGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRF 316
+ GP +GGIR+HP ++ L T K A++ GGA GG P+ S +E+ R
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120
Query: 317 CQSFMSEIYRYLGPDKDLLSEEMGVGTREMGYLLGQYRRVAGLVQGGFTGQRTLWSGSSL 376
+ F +I+ +G D+ + +MG + M ++L +Y + G TG+ GS
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 377 RPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAIYVLEKLIAYGAVPISVSDSRG 436
R ATG G+VF + +LA+ K ++GL V+ G G + + + + G ++VSD G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240
Query: 437 YLVDEDGFDYLKVSLLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDLAFACASQNE 496
+ + +G D ++ L K SL D++ A + DE CD+ CA
Sbjct: 241 AIRNPEGID---INALIKHKDATGSLNDFNGGDAMNS--DEL--LIHECDVLIPCALGGV 293
Query: 497 IDQSDAINLVNSGCCILVEGSNMPCTPDAVQVLRKANVLIAPAMXXXXXXXXXXELELNH 556
+++ +A ++ +VE +N P PDA ++L K V+I P + E
Sbjct: 294 LNKENAGDVKAK---FIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQ 350
Query: 557 DCSLMHWSPEDFESKLQVAMKQTY 580
+ W E +LQ M + +
Sbjct: 351 NIQGFMWEEEKVNLELQKYMTRAF 374
>AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 |
chr3:1006913-1008846 FORWARD LENGTH=411
Length = 411
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 10/357 (2%)
Query: 224 LLEPERMIVFRVPWVDDRGETHVNRGFRVQFNQSTGPCRGGIRFHPSMNLSIAKFLGFEQ 283
LL P R I D G GFRVQ + + GP +GGIR+HP + L
Sbjct: 28 LLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVEPDEVNALAQLM 87
Query: 284 TLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEIYRYLGPDKDLLSEEMGVGT 343
T K A++ GGA GG DP S +E+ R + F +I+ +G D+ + +MG G
Sbjct: 88 TWKTAVAKIPYGGAKGGIGCDPSELSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTGP 147
Query: 344 REMGYLLGQYRRVAGLVQGGFTGQRTLWSGSSLRPEATGYGLVFFAQLMLADMNKELKGL 403
+ M ++L +Y + G TG+ GS R ATG G++F + +L + K + G
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKTISGQ 207
Query: 404 RCVVSGSGKIAIYVLEKLIAYGAVPISVSDSRGYLVDEDGFDYLKVSLLRDIKAQQRSLR 463
R + G G + + + + G ++VSD G + + +G D L SLL + + R ++
Sbjct: 208 RFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTGAIKNNNGIDIL--SLLEHAE-ENRGIK 264
Query: 464 DYSKTYARSKYYDEAKPWSERCDLAFACASQNEIDQSDAINLVNSGCCILVEGSNMPCTP 523
+ + D E CD+ A I++ +A + ++EG+N P P
Sbjct: 265 GFDG----ADSIDPDSILVEDCDILVPAALGGVINRENANEIKAK---FIIEGANHPTDP 317
Query: 524 DAVQVLRKANVLIAPAMXXXXXXXXXXELELNHDCSLMHWSPEDFESKLQVAMKQTY 580
+A ++L+K V+I P + E + W E +L+ M + +
Sbjct: 318 EADEILKKKGVMILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNRELKTYMTRGF 374
>AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 |
chr5:2356153-2357546 FORWARD LENGTH=309
Length = 309
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 10/304 (3%)
Query: 197 IQAIQQAVQSLERVIAKNSHYINIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFNQ 256
+ A + + R++ +S I L+ P R I D G GFRVQ +
Sbjct: 4 LAATNRNFRHASRILGLDS---KIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60
Query: 257 STGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRF 316
+ GP +GGIR+HP ++ L T K A++ GGA GG P+ S +E+ R
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120
Query: 317 CQSFMSEIYRYLGPDKDLLSEEMGVGTREMGYLLGQYRRVAGLVQGGFTGQRTLWSGSSL 376
+ F +I+ +G D+ + +MG + M ++L +Y + G TG+ GS
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 377 RPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAIYVLEKLIAYGAVPISVSDSRG 436
R ATG G+VF + +LA+ K ++GL V+ G G + + + + G ++VSD G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240
Query: 437 YLVDEDGFDYLKVSLLRDIKAQQRSLRDYSKTYARSKYYDEAKPWSERCDLAFACASQNE 496
+ + +G D ++ L K SL D++ A + DE CD+ CA
Sbjct: 241 AIRNPEGID---INALIKHKDATGSLNDFNGGDAMNS--DEL--LIHECDVLIPCALGGV 293
Query: 497 IDQS 500
+++S
Sbjct: 294 LNKS 297