Miyakogusa Predicted Gene

Lj0g3v0102809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102809.1 Non Chatacterized Hit- tr|D8SWW0|D8SWW0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.04,0.000000001,seg,NULL; Occludin_ELL,Occludin/RNA
polymerase II elongation factor, ELL domain,CUFF.5801.1
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related | c...   176   3e-44

>AT3G21290.1 | Symbols:  | dentin sialophosphoprotein-related |
            chr3:7482318-7488676 FORWARD LENGTH=1192
          Length = 1192

 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 191/344 (55%), Gaps = 34/344 (9%)

Query: 26   LGTFPTDN-RFSLDKSPVVDGLGVSLQREPSDLELGEFRESTPDETHVTKQFERKGPFKH 84
            +G+ P D+ R  L K P   G G  LQ++ S+LELGE  E   ++T + K  E K  F+ 
Sbjct: 858  IGSSPLDSQRTYLAKLP--KGNGPVLQKQVSELELGELPEPLGEDTAL-KPIEEKTSFRQ 914

Query: 85   LENK-KTSEDRNSDITKGKPFVSSSFPSNLQSTDKKNTENHFDDSTKSRSRVMPAEFNKF 143
               K  TSE    D  K +   S S  +    T   + E+  +DS +S+   + +     
Sbjct: 915  SNLKPSTSEKLGIDSDKRRSKKSDSKKAAPPHTVNGSNEHVVEDSERSQKWALQSHGQNL 974

Query: 144  RNNESGVS-QDIDLD--------------------GHTESNRRAPA--NGSKQDTNLGIN 180
               ++ +S Q+ +L+                    G+ E+N++ P   +GSK+ +     
Sbjct: 975  TGTDTEISSQNKNLEDAAYKSRQKDSRARVGNSVEGYGETNKKTPVVKHGSKRAST---- 1030

Query: 181  SYPVKESKRQTPNSLEAVADGGKDSVFAARNNIEQRKREXXXXXXXXXXXKYEKDEPELK 240
            S   +ESKR +  S+    +G KD+      ++ + K+            KYEK  PELK
Sbjct: 1031 SRSSRESKRHS--SVSNSINGHKDATSIPGGSVVREKQMTSFGEEDSSYLKYEKASPELK 1088

Query: 241  GPIMTFSQYKEYVQEYGDKYDSYCSLYKILESYRNEFQQLGDDLVYAKGRDMDRYYDILE 300
            GPI    QYK Y+QEY DKYDSY S+ KILES+RN+FQ+LG DL +AKGRD++RY  I+E
Sbjct: 1089 GPISDHLQYKAYMQEYNDKYDSYHSINKILESHRNDFQKLGQDLGFAKGRDVERYNKIVE 1148

Query: 301  QLKESYRRCGPRHKRLKKIFVVLHQELENIKLRIKDFAHSYSKE 344
            Q+KESY + G RHKRLKK+FVVLH+EL+++K R++D+A S+ K+
Sbjct: 1149 QIKESYCKYGERHKRLKKVFVVLHEELKHLKQRMRDYASSHGKD 1192