Miyakogusa Predicted Gene

Lj0g3v0102499.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102499.2 Non Chatacterized Hit- tr|I3SF42|I3SF42_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.26,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; YIP1 INTERACTING FACTOR HOMOLOG (YIF1
PROTEIN),Hrf1; YIF1,Hrf1,CUFF.5783.2
         (269 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30890.2 | Symbols:  | Integral membrane HRF1 family protein ...   421   e-118
AT1G30890.1 | Symbols:  | Integral membrane HRF1 family protein ...   421   e-118
AT3G59500.1 | Symbols:  | Integral membrane HRF1 family protein ...   419   e-117

>AT1G30890.2 | Symbols:  | Integral membrane HRF1 family protein |
           chr1:10994890-10995999 FORWARD LENGTH=269
          Length = 269

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/269 (75%), Positives = 224/269 (83%)

Query: 1   MYNNVGSQPGVPQPPTSSQANPFGNAFQVXXXXXXXXXXXXXXXXXXXXSSEYVQSNISR 60
           MYNN+G QPG+P+PP + +  PFGN F                      SSEYVQSNISR
Sbjct: 1   MYNNMGPQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVND YV+NKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGEAPLL 180
           P MAFGTYVVLAGLSLGL+GKF+PEALN LF+KGL+GWF+Q  LLK+TLLSLGSGEAPLL
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRTYDSS 240
           DI+AY GY F G+CLA   +I+ GYSYY LMPWTCLC  +FLVKTMKRVLFAEVR+YDSS
Sbjct: 181 DIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 KHHYLLLFIALVQFPLFTWLGNITVNWLL 269
           KHHYLLLF+ALVQFPL  WLGNI+VNWLL
Sbjct: 241 KHHYLLLFLALVQFPLLIWLGNISVNWLL 269


>AT1G30890.1 | Symbols:  | Integral membrane HRF1 family protein |
           chr1:10994890-10995999 FORWARD LENGTH=269
          Length = 269

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/269 (75%), Positives = 224/269 (83%)

Query: 1   MYNNVGSQPGVPQPPTSSQANPFGNAFQVXXXXXXXXXXXXXXXXXXXXSSEYVQSNISR 60
           MYNN+G QPG+P+PP + +  PFGN F                      SSEYVQSNISR
Sbjct: 1   MYNNMGPQPGMPRPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVND YV+NKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGEAPLL 180
           P MAFGTYVVLAGLSLGL+GKF+PEALN LF+KGL+GWF+Q  LLK+TLLSLGSGEAPLL
Sbjct: 121 PFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGEAPLL 180

Query: 181 DIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRTYDSS 240
           DI+AY GY F G+CLA   +I+ GYSYY LMPWTCLC  +FLVKTMKRVLFAEVR+YDSS
Sbjct: 181 DIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRSYDSS 240

Query: 241 KHHYLLLFIALVQFPLFTWLGNITVNWLL 269
           KHHYLLLF+ALVQFPL  WLGNI+VNWLL
Sbjct: 241 KHHYLLLFLALVQFPLLIWLGNISVNWLL 269


>AT3G59500.1 | Symbols:  | Integral membrane HRF1 family protein |
           chr3:21987110-21988169 FORWARD LENGTH=269
          Length = 269

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/268 (75%), Positives = 225/268 (83%)

Query: 1   MYNNVGSQPGVPQPPTSSQANPFGNAFQVXXXXXXXXXXXXXXXXXXXXSSEYVQSNISR 60
           MYNN+G +PG+  P  + Q +PFGN F                      SSEYVQSNISR
Sbjct: 1   MYNNMGPRPGMAMPQANPQPSPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVND YV+NKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGEAPLL 180
           PLMAFGTYVVLAGLSLGL+GKF+PEALN LF+KG++GWF+Q  LLK+TLLSLGSGEAPLL
Sbjct: 121 PLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGEAPLL 180

Query: 181 DIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRTYDSS 240
           DI+AYAGYTFTG+CLAVLG+II GYSYY L+PWTCLC  VFLVKTMKRVLFAE R+YDSS
Sbjct: 181 DIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAESRSYDSS 240

Query: 241 KHHYLLLFIALVQFPLFTWLGNITVNWL 268
           +HHYLL+F+AL QFPL  WLGNI+VNWL
Sbjct: 241 RHHYLLIFVALAQFPLLIWLGNISVNWL 268