Miyakogusa Predicted Gene

Lj0g3v0102449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102449.1 tr|G7IRD7|G7IRD7_MEDTR DNA-directed RNA
polymerase OS=Medicago truncatula GN=MTR_2g086070 PE=4
SV=1,67.57,0.0000008,NAD(P)-binding Rossmann-fold domains,NULL; no
description,NAD(P)-binding domain; Sterile,Fatty acyl-,CUFF.5778.1
         (246 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33790.1 | Symbols: CER4, G7, FAR3 | Jojoba acyl CoA reductas...   282   2e-76
AT5G22500.1 | Symbols: FAR1 | fatty acid reductase 1 | chr5:7470...   251   5e-67
AT3G44540.1 | Symbols: FAR4 | fatty acid reductase 4 | chr3:1612...   250   6e-67
AT3G44550.1 | Symbols: FAR5 | fatty acid reductase 5 | chr3:1613...   227   4e-60
AT3G44560.1 | Symbols: FAR8 | fatty acid reductase 8 | chr3:1615...   206   1e-53
AT5G22420.1 | Symbols: FAR7 | fatty acid reductase 7 | chr5:7429...   188   3e-48
AT3G44540.2 | Symbols: FAR4 | fatty acid reductase 4 | chr3:1612...   161   3e-40
AT3G11980.1 | Symbols: MS2, FAR2 | Jojoba acyl CoA reductase-rel...   145   2e-35
AT3G56700.1 | Symbols: FAR6 | fatty acid reductase 6 | chr3:2099...   106   2e-23

>AT4G33790.1 | Symbols: CER4, G7, FAR3 | Jojoba acyl CoA
           reductase-related male sterility protein |
           chr4:16204325-16207891 REVERSE LENGTH=493
          Length = 493

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 129/245 (52%), Positives = 170/245 (69%), Gaps = 1/245 (0%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           M+V   + +L +V+LRP+I+TSTFKEPFPGW+EG+RTIDSLAV YGKGKLTCFL DL+ V
Sbjct: 250 MMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAV 309

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
            DV+P                 +  ++  YHVGSS+RNP+      +   RYF+ KPW N
Sbjct: 310 SDVMPADMVVNSILVSMAAQAGK-QEEIIYHVGSSLRNPMKNSKFPELAYRYFSIKPWTN 368

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYLELNRKIQVV 180
           K+G  VKVG + +L+ M SF RYM IRYL+ LKGL+L N   C+ F+  +   N+KI  +
Sbjct: 369 KEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNKKINFI 428

Query: 181 MRLVELYRPYLFFSGVFDDMNTEKLRIAARQGETEKDLFYFDPKDIDWDDYFMNTHIPGI 240
            RLV+LY+PYLFF G+FDD NTEKLR    +   E ++FYFDPK +DWDDYF+NTH+ G+
Sbjct: 429 FRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNTHVIGL 488

Query: 241 VKYIF 245
           +KY+F
Sbjct: 489 LKYVF 493


>AT5G22500.1 | Symbols: FAR1 | fatty acid reductase 1 |
           chr5:7470541-7473916 FORWARD LENGTH=491
          Length = 491

 Score =  251 bits (640), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 118/247 (47%), Positives = 162/247 (65%), Gaps = 1/247 (0%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           ML+ + + +LP+VI+RPT++TST  EPFPGW EG++T+DS+ V YGKG+L CFL D N V
Sbjct: 244 MLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSV 303

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
            D+IP                     QA YHVGSS +NPVT+  L D+  RYF  +P I 
Sbjct: 304 FDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPLIG 363

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYLELNRKIQVV 180
           ++GS + V +  +L+ MA F  YM +RY LPL+ L+L N  +       Y +L+RKI++ 
Sbjct: 364 RNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIKLA 423

Query: 181 MRLVELYRPYLFFSGVFDDMNTEKLRIAARQGETEKD-LFYFDPKDIDWDDYFMNTHIPG 239
           MRLVELY+PYL F G+FDD+NTE+LR+  ++   E D  F FDPK IDWD+Y  NTHIPG
Sbjct: 424 MRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHIPG 483

Query: 240 IVKYIFK 246
           ++ ++ K
Sbjct: 484 LITHVLK 490


>AT3G44540.1 | Symbols: FAR4 | fatty acid reductase 4 |
           chr3:16124079-16127769 FORWARD LENGTH=493
          Length = 493

 Score =  250 bits (639), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 116/247 (46%), Positives = 159/247 (64%), Gaps = 1/247 (0%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           ML+   + +LP+VI+RPT++TSTF EPFPGW EG+RTIDS+ V YGKG+L CFL D N V
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
           +D+IP                 +   Q  YHVGSS +NP+T+  + D    YFT  P + 
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVR 365

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYLELNRKIQVV 180
           +DGSS+ V +  +L+ MA F  YM +RY LPL+ L+L    +  +    Y +++RKI++ 
Sbjct: 366 RDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKLA 425

Query: 181 MRLVELYRPYLFFSGVFDDMNTEKLRIAARQGETEK-DLFYFDPKDIDWDDYFMNTHIPG 239
           MRLV+LYRPY+ F G+FDD NTEKLR+  ++   E   LF FDPK IDW+DY    HIPG
Sbjct: 426 MRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPG 485

Query: 240 IVKYIFK 246
           ++ Y+ K
Sbjct: 486 LITYVLK 492


>AT3G44550.1 | Symbols: FAR5 | fatty acid reductase 5 |
           chr3:16138060-16141409 FORWARD LENGTH=496
          Length = 496

 Score =  227 bits (579), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 113/249 (45%), Positives = 154/249 (61%), Gaps = 3/249 (1%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           ML+ + K +LP+VI+RPT++TST  EPFPGW EG+RT+DS+ + YGKG L CFL D+N V
Sbjct: 247 MLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSV 306

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
            D+IP                        YHVGSS +NPVT+  + +  +RYFT  P  +
Sbjct: 307 CDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYFTKNPLRS 366

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYLELNRKIQVV 180
           ++GS + V +V  +  MA F  YM +RY LPL+ LKL +  +       Y + NRKI++V
Sbjct: 367 RNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDKNRKIELV 426

Query: 181 MRLVELYRPYLFFSGVFDDMNTEKLRIAARQGE---TEKDLFYFDPKDIDWDDYFMNTHI 237
           MRLVELY PY+ F G+FDD NT+ L    ++ E   TEK +F FDPK I+W DY  N HI
Sbjct: 427 MRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGDYLTNIHI 486

Query: 238 PGIVKYIFK 246
            G+V ++ K
Sbjct: 487 SGLVTHVLK 495


>AT3G44560.1 | Symbols: FAR8 | fatty acid reductase 8 |
           chr3:16151177-16154397 FORWARD LENGTH=496
          Length = 496

 Score =  206 bits (524), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 106/251 (42%), Positives = 149/251 (59%), Gaps = 7/251 (2%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           ML+   K +LP+VI+RPT++TST  EPFPGW EG+RT+DS+ + YGKG L CFL D+N V
Sbjct: 247 MLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSV 306

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
            D+IP                        Y VGSS +NP+ Y  +++    YFT     +
Sbjct: 307 CDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNSLRS 366

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYLELNRKIQVV 180
           ++GS + V ++ ++  +A F  YM IRY LP++ LKL +  +       Y   NRKI +V
Sbjct: 367 RNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKIDMV 426

Query: 181 MRLVELYRPYLFFSGVFDDMNTEKLRIAARQGE-----TEKDLFYFDPKDIDWDDYFMNT 235
           MRLV+LY PY+ F G+FDD NT+ L   A+Q E     +E  +F FDPK I W DY +N 
Sbjct: 427 MRLVKLYEPYVLFKGIFDDRNTKNL--CAKQKEEDNRNSENFMFDFDPKIIKWKDYLINV 484

Query: 236 HIPGIVKYIFK 246
           HIPG++ ++ K
Sbjct: 485 HIPGLITHVLK 495


>AT5G22420.1 | Symbols: FAR7 | fatty acid reductase 7 |
           chr5:7429903-7432586 FORWARD LENGTH=409
          Length = 409

 Score =  188 bits (478), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 137/233 (58%), Gaps = 3/233 (1%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           ML+   +  +P+VI+RPTI+TSTF +PFPGW EG++T+DS+ + YGKG L CFL D   V
Sbjct: 173 MLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKGILKCFLVDQKTV 232

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
            D+IP                +       YHVGSS +NPV Y  + +   RYF   P + 
Sbjct: 233 CDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVG 292

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYLELNRKIQVV 180
           ++G  + V +V  ++ +A FR Y  +RY LP++ L L +       +  +   NRK ++ 
Sbjct: 293 RNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQ-RDKFALHNRKFKMA 350

Query: 181 MRLVELYRPYLFFSGVFDDMNTEKLRIAARQGETEKDLFYFDPKDIDWDDYFM 233
           MRLV+LY+PY+ F G+FDD N E LRI     + EK LF  +PK IDW+DYFM
Sbjct: 351 MRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDMEK-LFGTNPKCIDWEDYFM 402


>AT3G44540.2 | Symbols: FAR4 | fatty acid reductase 4 |
           chr3:16124079-16127644 FORWARD LENGTH=433
          Length = 433

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/171 (44%), Positives = 103/171 (60%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           ML+   + +LP+VI+RPT++TSTF EPFPGW EG+RTIDS+ V YGKG+L CFL D N V
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVRNPVTYHNLQDYGLRYFTAKPWIN 120
           +D+IP                 +   Q  YHVGSS +NP+T+  + D    YFT  P + 
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVR 365

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYFKGTYL 171
           +DGSS+ V +  +L+ MA F  YM +RY LPL+ L    +  C +   T L
Sbjct: 366 RDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQTLTARLSWRCGWSTSTDL 416


>AT3G11980.1 | Symbols: MS2, FAR2 | Jojoba acyl CoA
           reductase-related male sterility protein |
           chr3:3814484-3816927 FORWARD LENGTH=616
          Length = 616

 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 14/254 (5%)

Query: 1   MLVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGV 60
           M++   +GD+PVVI+RP+++ ST+K+PFPGW EG R +D + + YGKG+LT FL D  GV
Sbjct: 366 MMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGFLVDPKGV 425

Query: 61  VDVIPXXXXXXXXXXXXXXXXNQPSDQA----TYHVGSSVRNPVTYHNLQDYGLRYFTAK 116
           +DV+P                   SD       Y + SS  NP+ + +L +    ++   
Sbjct: 426 LDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYNHYKTS 485

Query: 117 PWINKDGSSVKVGRVNVLTDMASFRRYMF----IRYLLPLKGLKLANTTFCQYFKGTYLE 172
           P ++  G  + V  + +   +  F  +++     R  L + G+   ++   Q  K     
Sbjct: 486 PCMDSKGDPIMVRLMKLFNSVDDFSDHLWRDAQERSGL-MSGMSSVDSKMMQKLK---FI 541

Query: 173 LNRKIQVVMRLVELYRPYLFFSGVFDDMNTEKLRIAARQGETEKDLFYFDPKDIDWDDYF 232
             + ++    L  +Y PY F+ G FD+ NT+  R+     E EK  F FD   I+W DY 
Sbjct: 542 CKKSVEQAKHLATIYEPYTFYGGRFDNSNTQ--RLMENMSEDEKREFGFDVGSINWTDYI 599

Query: 233 MNTHIPGIVKYIFK 246
            N HIPG+ +++ K
Sbjct: 600 TNVHIPGLRRHVLK 613


>AT3G56700.1 | Symbols: FAR6 | fatty acid reductase 6 |
           chr3:20999731-21002058 REVERSE LENGTH=527
          Length = 527

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 25/248 (10%)

Query: 2   LVEQLKGDLPVVILRPTIVTSTFKEPFPGWSEGVRTIDSLAVNYGKGKLTCFLGDLNGVV 61
           ++   +G+LPVVI+RP+I+ S++ EPFPGW +G R  D + + Y KG+++ F  D   ++
Sbjct: 289 VIHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLM 348

Query: 62  DVIPXXXXXXXXXXXXXXXXNQPSDQATYHVGSSVR-NPVTYHNLQDYGLRYFTAKPWIN 120
           D+IP                    +   Y++ SS   NP+    L D   ++    P   
Sbjct: 349 DIIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL-- 406

Query: 121 KDGSSVKVGRVNVLTDMASFRRYMFIRYLLPLKGLKLANTTFCQYF------KGTYLELN 174
            + + + +  + + + +  F                L+NT   Q         G   +  
Sbjct: 407 -EETVIDLEHMKIHSSLEGFTS-------------ALSNTIIKQERVIDNEGGGLSTKGK 452

Query: 175 RKIQVVMRLVELYRPYLFFSGVFDDMNTEKLRIAARQGETEKDLFYFDPKDIDWDDYFMN 234
           RK+   + L + Y PY FF   FD+ NT  L         EK  F FD K IDW+ Y +N
Sbjct: 453 RKLNYFVSLAKTYEPYTFFQARFDNTNTTSL--IQEMSMEEKKTFGFDIKGIDWEHYIVN 510

Query: 235 THIPGIVK 242
            H+PG+ K
Sbjct: 511 VHLPGLKK 518