Miyakogusa Predicted Gene

Lj0g3v0101519.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101519.2 Non Chatacterized Hit- tr|I1JMQ4|I1JMQ4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.03,0,TRNASYNTHGB,Glycine-tRNA ligase, beta subunit;
tRNA_synt_2f,Glycine-tRNA ligase, beta subunit; SUBFA,CUFF.5703.2
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48110.1 | Symbols: EDD1, EDD | glycine-tRNA ligases | chr3:1...   424   e-119

>AT3G48110.1 | Symbols: EDD1, EDD | glycine-tRNA ligases |
           chr3:17763111-17770964 FORWARD LENGTH=1067
          Length = 1067

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 194/272 (71%), Positives = 240/272 (88%)

Query: 1   MRWNSQVMFSRPIRWILALHGQAVVPFIFSGVMSGNLSCGLRNTASAVVQVENAESYSFA 60
           MRWNS VMFSRPIRW++ALHG  VVPF F+G+ SGN+SCGLRNTASA + V+NAESY   
Sbjct: 528 MRWNSSVMFSRPIRWVMALHGDLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDT 587

Query: 61  MKNAGINVAVEDRKKIIVERSNTLAESVNGQILIPNGLLDEVVNLVEAPVPVLGKFKETF 120
           M+N+GIN+ +E+RKKII+E+SN LA+SV+G++++P  LL+EV NLVEAPVP++GKFKE+F
Sbjct: 588 MRNSGINIEIEERKKIILEKSNALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESF 647

Query: 121 LDLPKELLIMVMQKHQKYFAICDADGKLLPYFIAVANGGIDETTVRKGNESVLRARYEDA 180
           L+LP+ELL +VMQKHQKYF+I D  G+LLPYFIAVANG I+E  V+KGNE+VLRARYEDA
Sbjct: 648 LELPEELLTIVMQKHQKYFSIIDESGQLLPYFIAVANGAINEDVVKKGNEAVLRARYEDA 707

Query: 181 KFFYEMDTRKRFSEFREQLKNILFHEKLGTMLDKITRVENLVTKLSCILDIGEDMLQIIQ 240
           KFFYE+DTRKRFSEFR+QL+ ILFHEKLGTMLDK+ R++ +V+KL   L I ED+L +++
Sbjct: 708 KFFYEVDTRKRFSEFRDQLQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVE 767

Query: 241 DAASLAMSDLATAVVTEFTSLSGVMGRHYALR 272
           DAASLAMSDLATAVVTEFT+LSG+M RHYALR
Sbjct: 768 DAASLAMSDLATAVVTEFTALSGIMARHYALR 799