Miyakogusa Predicted Gene
- Lj0g3v0101459.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101459.1 Non Chatacterized Hit- tr|D8SK47|D8SK47_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.8,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL,CUFF.5697.1
(239 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55750.1 | Symbols: | BSD domain (BTF2-like transcription fa... 195 3e-50
AT3G61420.1 | Symbols: | BSD domain (BTF2-like transcription fa... 186 2e-47
>AT1G55750.1 | Symbols: | BSD domain (BTF2-like transcription
factors, Synapse-associated proteins and DOS2-like
proteins) | chr1:20840449-20845135 REVERSE LENGTH=591
Length = 591
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 156/265 (58%), Gaps = 32/265 (12%)
Query: 1 MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDI---- 56
MEADQGDDYTHL DH I RDG+ ++ E Q+ +R+LLQDLNR AVVLEGR++D+
Sbjct: 287 MEADQGDDYTHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESED 346
Query: 57 --------METEYIHESDG-VREEARRNRISTMTQI---EDLQAQDDHPFAPLCIKDPRD 104
+ + ++DG ++A + R+ M+++ EDLQA + P APL IKDPRD
Sbjct: 347 TRIVAEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRD 406
Query: 105 YFGSQQAN------GSLG---SDEEAYGYLRASISKIKAKGLKDPLLSSEIALNGL--MT 153
YF SQQ N G+ G + EAYG L+ SI +I+A GL DPL+ E++ +T
Sbjct: 407 YFESQQGNVLNVPRGAKGLKRNVHEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLT 466
Query: 154 KNVXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITTRHL 213
+ + S D LP + +DE+L H QELL+HFWSSYPITT +L
Sbjct: 467 RTIATAKNINGKNPRE-----SFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYL 521
Query: 214 INKTRRLKEAISQLYSKLEEIKVSA 238
K +LK+A+S YSKLE +K S
Sbjct: 522 HTKVGKLKDAMSNTYSKLEAMKESV 546
>AT3G61420.1 | Symbols: | BSD domain (BTF2-like transcription
factors, Synapse-associated proteins and DOS2-like
proteins) | chr3:22727235-22731760 REVERSE LENGTH=579
Length = 579
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 153/263 (58%), Gaps = 28/263 (10%)
Query: 1 MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDI---- 56
M+AD+GDDYTHL DH I RDG+ +I E Q+ +R+LLQDLNR AVVLEGR +++
Sbjct: 282 MDADEGDDYTHLMDHGIQRDGTNDIIEPQNDQLKRSLLQDLNRHAAVVLEGRCINVQSED 341
Query: 57 --------METEYIHESDG-VREEA---RRNRISTMTQIEDLQAQDDHPFAPLCIKDPRD 104
+ + ++DG + ++A R R+S T++EDLQA + P APL IKDPRD
Sbjct: 342 TRIVAEALTRAKQVSKADGEITKDANQERLERMSRATEMEDLQAPQNFPLAPLSIKDPRD 401
Query: 105 YFGSQQAN------GSLGSDE---EAYGYLRASISKIKAKGLKDPLLSSEIALNGLMTKN 155
YF SQQ N G+ S EAYG L+ SI I+ GL DPL+ E++ + +
Sbjct: 402 YFESQQGNILSEPRGAKASKRNVHEAYGLLKESILVIRMTGLSDPLIKPEVSFE--VFSS 459
Query: 156 VXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITTRHLIN 215
+ QE S D LP + +DE++ H QEL+RHFWSSYPITT +L
Sbjct: 460 LTRTISTAKNILGKNPQE-SFLDRLPKSTKDEVIHHWTSIQELVRHFWSSYPITTTYLST 518
Query: 216 KTRRLKEAISQLYSKLEEIKVSA 238
K +LK+A+S YS L+ +K S
Sbjct: 519 KVGKLKDAMSNTYSLLDAMKQSV 541