Miyakogusa Predicted Gene
- Lj0g3v0101289.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101289.1 Non Chatacterized Hit- tr|D7TS57|D7TS57_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,91.67,0,Cpn60_TCP1,Chaperonin Cpn60/TCP-1; GroEL equatorial
domain-like,Chaperonin Cpn60/TCP-1; TCOMPLEXTCP1,CUFF.5684.1
(144 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |... 265 9e-72
AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:... 257 2e-69
AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 | chr2:... 257 2e-69
AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A | chr... 188 1e-48
AT5G56500.2 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 131 2e-31
AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 131 2e-31
AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 121 1e-28
AT1G55490.2 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:... 121 2e-28
AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:... 121 2e-28
AT2G28000.1 | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alp... 114 2e-26
AT5G18820.1 | Symbols: EMB3007 | TCP-1/cpn60 chaperonin family p... 101 1e-22
AT1G26230.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 100 3e-22
AT1G26230.2 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 100 6e-22
AT5G20890.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 52 1e-07
AT3G18190.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 51 3e-07
AT3G02530.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 50 7e-07
AT5G16070.1 | Symbols: | TCP-1/cpn60 chaperonin family protein ... 50 7e-07
>AT3G23990.1 | Symbols: HSP60, HSP60-3B | heat shock protein 60 |
chr3:8669013-8672278 FORWARD LENGTH=577
Length = 577
Score = 265 bits (676), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 129/144 (89%), Positives = 141/144 (97%), Gaps = 1/144 (0%)
Query: 1 MYRFATSLASKARIARNTSQQIGSRAAWSRNYAAKDIKFGVEARALMLKGVEELADAVKV 60
MYRFA++LASKARIA+N ++Q+ SR +WSRNYAAK+IKFGVEARALMLKGVE+LADAVKV
Sbjct: 1 MYRFASNLASKARIAQN-ARQVSSRMSWSRNYAAKEIKFGVEARALMLKGVEDLADAVKV 59
Query: 61 TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT 120
TMGPKGRNVVIEQS+GAPKVTKDGVTVAKSIEFKD++KNVGASLVKQVANATNDVAGDGT
Sbjct: 60 TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGT 119
Query: 121 TCATVLTRAIFAEGCKSVAAGMNA 144
TCATVLTRAIFAEGCKSVAAGMNA
Sbjct: 120 TCATVLTRAIFAEGCKSVAAGMNA 143
>AT2G33210.2 | Symbols: HSP60-2 | heat shock protein 60-2 |
chr2:14075093-14078568 REVERSE LENGTH=580
Length = 580
Score = 257 bits (657), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/144 (86%), Positives = 135/144 (93%)
Query: 1 MYRFATSLASKARIARNTSQQIGSRAAWSRNYAAKDIKFGVEARALMLKGVEELADAVKV 60
MYR +++ASKARIAR + QIGSR +RNYAAKDI+FGVEARALML+GVE+LADAVKV
Sbjct: 1 MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60
Query: 61 TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT 120
TMGPKGRNV+IEQS+GAPKVTKDGVTVAKSIEFKDR+KNVGASLVKQVANATNDVAGDGT
Sbjct: 61 TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120
Query: 121 TCATVLTRAIFAEGCKSVAAGMNA 144
TCATVLTRAIF EGCKSVAAGMNA
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNA 144
>AT2G33210.1 | Symbols: HSP60-2 | heat shock protein 60-2 |
chr2:14075093-14078568 REVERSE LENGTH=585
Length = 585
Score = 257 bits (657), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/144 (86%), Positives = 135/144 (93%)
Query: 1 MYRFATSLASKARIARNTSQQIGSRAAWSRNYAAKDIKFGVEARALMLKGVEELADAVKV 60
MYR +++ASKARIAR + QIGSR +RNYAAKDI+FGVEARALML+GVE+LADAVKV
Sbjct: 1 MYRLVSNVASKARIARKCTSQIGSRLNSTRNYAAKDIRFGVEARALMLRGVEDLADAVKV 60
Query: 61 TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT 120
TMGPKGRNV+IEQS+GAPKVTKDGVTVAKSIEFKDR+KNVGASLVKQVANATNDVAGDGT
Sbjct: 61 TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGT 120
Query: 121 TCATVLTRAIFAEGCKSVAAGMNA 144
TCATVLTRAIF EGCKSVAAGMNA
Sbjct: 121 TCATVLTRAIFTEGCKSVAAGMNA 144
>AT3G13860.1 | Symbols: HSP60-3A | heat shock protein 60-3A |
chr3:4561704-4565133 REVERSE LENGTH=572
Length = 572
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/122 (74%), Positives = 104/122 (85%)
Query: 22 IGSRAAWSRNYAAKDIKFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVT 81
+ R SRNYAAKDI FG+ ARA ML+GV E+A+AVKVTMGPKGRNV+IE SYG PK+T
Sbjct: 21 VSGRIISSRNYAAKDISFGIGARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKIT 80
Query: 82 KDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAG 141
KDGVTVAKSI F+ + KN+GA LVKQVA+ATN VAGDGTTCATVLT+AI EGCKSVAAG
Sbjct: 81 KDGVTVAKSISFQAKAKNIGAELVKQVASATNKVAGDGTTCATVLTQAILIEGCKSVAAG 140
Query: 142 MN 143
+N
Sbjct: 141 VN 142
>AT5G56500.2 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:22874058-22876966 FORWARD LENGTH=597
Length = 597
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 3/128 (2%)
Query: 19 SQQIGSRAA-WSRNYAAKDIKFGVEARAL--MLKGVEELADAVKVTMGPKGRNVVIEQSY 75
+Q I R A + + YAAK + F + A+ + GV +LAD V VT+GPKGRNVV+E Y
Sbjct: 36 TQSIAQRKARFPKIYAAKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKY 95
Query: 76 GAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGC 135
G+P++ DGVTVA+ +E +D V+N+GA LV+Q A+ TND+AGDGTT + VL + + AEG
Sbjct: 96 GSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 155
Query: 136 KSVAAGMN 143
K VAAG N
Sbjct: 156 KVVAAGAN 163
>AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:22874058-22876966 FORWARD LENGTH=597
Length = 597
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 3/128 (2%)
Query: 19 SQQIGSRAA-WSRNYAAKDIKFGVEARAL--MLKGVEELADAVKVTMGPKGRNVVIEQSY 75
+Q I R A + + YAAK + F + A+ + GV +LAD V VT+GPKGRNVV+E Y
Sbjct: 36 TQSIAQRKARFPKIYAAKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKY 95
Query: 76 GAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGC 135
G+P++ DGVTVA+ +E +D V+N+GA LV+Q A+ TND+AGDGTT + VL + + AEG
Sbjct: 96 GSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGV 155
Query: 136 KSVAAGMN 143
K VAAG N
Sbjct: 156 KVVAAGAN 163
>AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr3:4389685-4392624 FORWARD LENGTH=596
Length = 596
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
Query: 33 AAKDIKF---GVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAK 89
AAK++ F G R L GV +LAD V VT+GPKGRNVV+E YG+P++ DGVTVA+
Sbjct: 51 AAKELHFNKDGTTIRKLQ-TGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAR 109
Query: 90 SIEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMN 143
+E +D V+N+GA LV+Q A TND+AGDGTT + VL + AEG K VAAG N
Sbjct: 110 EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGAN 163
>AT1G55490.2 | Symbols: CPN60B, LEN1 | chaperonin 60 beta |
chr1:20715717-20718673 REVERSE LENGTH=600
Length = 600
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
Query: 33 AAKDIKFGVEARAL--MLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKS 90
AAK++ F + + + GV +LAD V VT+GPKGRNVV+E YG+P++ DGVTVA+
Sbjct: 55 AAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVARE 114
Query: 91 IEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMN 143
+E +D V+N+GA LV+Q A TND+AGDGTT + VL + AEG K VAAG N
Sbjct: 115 VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGAN 167
>AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta |
chr1:20715717-20718673 REVERSE LENGTH=600
Length = 600
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
Query: 33 AAKDIKFGVEARAL--MLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKS 90
AAK++ F + + + GV +LAD V VT+GPKGRNVV+E YG+P++ DGVTVA+
Sbjct: 55 AAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVARE 114
Query: 91 IEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMN 143
+E +D V+N+GA LV+Q A TND+AGDGTT + VL + AEG K VAAG N
Sbjct: 115 VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGAN 167
>AT2G28000.1 | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alpha
| chr2:11926603-11929184 FORWARD LENGTH=586
Length = 586
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
Query: 35 KDIKFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFK 94
K+I F +RA + G+++LAD V +T+GP+GRNVV+++ +G+PKV DGVT+A++IE
Sbjct: 49 KEIAFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELP 107
Query: 95 DRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMN 143
+ ++N GA+L+++VA+ TND AGDGTT A++L R I G SV +G N
Sbjct: 108 NAMENAGAALIREVASKTNDSAGDGTTTASILAREIIKHGLLSVTSGAN 156
>AT5G18820.1 | Symbols: EMB3007 | TCP-1/cpn60 chaperonin family
protein | chr5:6271549-6274153 FORWARD LENGTH=575
Length = 575
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 1 MYRFATSLASKARIA-RNTSQQIGSRAAWSRNYAAKDIKFGVEARALMLKGVEELADAVK 59
M+ + S S I+ R + Q+ R AK I +G ++R + G+++LADAV
Sbjct: 1 MFAVSPSSFSPTTISPRRSGQRNEPRKFSVVRAGAKRILYGKDSREKLQAGIDKLADAVS 60
Query: 60 VTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDG 119
+T+GP+GRNVV+ + KV DGVT+AKSIE D ++N GA+L+++VA N+ AGDG
Sbjct: 61 ITLGPRGRNVVLAEK-DTIKVINDGVTIAKSIELPDTIENAGATLIQEVAIKMNESAGDG 119
Query: 120 TTCATVLTRAIFAEGCKSVAAGMNA 144
TT A +L R + G ++A G NA
Sbjct: 120 TTTAIILAREMIKAGSLAIAFGANA 144
>AT1G26230.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr1:9072388-9075272 REVERSE LENGTH=611
Length = 611
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 2/114 (1%)
Query: 33 AAKDIKFGVEARAL--MLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKS 90
AAK++ F + + G + +A + VT+GPKGRNVV++ YG P++ DG TV K
Sbjct: 39 AAKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKE 98
Query: 91 IEFKDRVKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNA 144
IE +D ++NVG LV+Q TND+AGDG+T + +L + EG K ++AG N
Sbjct: 99 IELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNP 152
>AT1G26230.2 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr1:9072388-9075047 REVERSE LENGTH=559
Length = 559
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%)
Query: 50 GVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVA 109
G + +A + VT+GPKGRNVV++ YG P++ DG TV K IE +D ++NVG LV+Q
Sbjct: 6 GADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAG 65
Query: 110 NATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNA 144
TND+AGDG+T + +L + EG K ++AG N
Sbjct: 66 AKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNP 100
>AT5G20890.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:7087020-7089906 REVERSE LENGTH=527
Length = 527
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 40 GVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSYG---APKVTKDGVTVAKSIEFKDR 96
G AR G ++D VK T+GPKG + ++ QS G A VT DG T+ KS+
Sbjct: 16 GERARMASFVGAMAISDLVKSTLGPKGMDKIL-QSTGRGHAVTVTNDGATILKSL----H 70
Query: 97 VKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMN 143
+ N A ++ ++ +D GDGTT VL + E K VA+ ++
Sbjct: 71 IDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIH 117
>AT3G18190.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr3:6232226-6233836 FORWARD LENGTH=536
Length = 536
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 25/141 (17%)
Query: 1 MYRFATSLASKARIARNTSQQIGSRA-AWSRNYAAKDIKFGV--EARALMLKGVEELADA 57
M A +ASK R GS+A ++ N +DI+F ARA+ +DA
Sbjct: 1 MAAVAAPMASKPR---------GSKAESFVDNKRREDIRFANINSARAV--------SDA 43
Query: 58 VKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAG 117
V+ ++GPKG + +I + G +T DG T+ +E V A ++ +++ + + AG
Sbjct: 44 VRTSLGPKGMDKMISTANGEVIITNDGATILNKME----VLQPAAKMLVELSKSQDSAAG 99
Query: 118 DGTTCATVLTRAIFAEGCKSV 138
DGTT V+ A+ E C+S+
Sbjct: 100 DGTTTVVVIAGALLKE-CQSL 119
>AT3G02530.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr3:528806-532457 REVERSE LENGTH=535
Length = 535
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 43 ARALMLKGVEELADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGA 102
A + + + L D +K +GPKG ++ G K+TKDG T+ K ++ ++N A
Sbjct: 18 ALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQ----IQNPTA 73
Query: 103 SLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMN 143
++ + A A +D++GDGTT + + + + + GM+
Sbjct: 74 IMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMH 114
>AT5G16070.1 | Symbols: | TCP-1/cpn60 chaperonin family protein |
chr5:5247549-5251050 REVERSE LENGTH=535
Length = 535
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 54 LADAVKVTMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATN 113
L D +K +GPKG ++ G K+TKDG T+ K ++ ++N A ++ + A A +
Sbjct: 29 LQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQ----IQNPTAIMIARTAVAQD 84
Query: 114 DVAGDGTTCATVLTRAIFAEGCKSVAAGMNA 144
D++GDGTT + + + + + GM+
Sbjct: 85 DISGDGTTSTVIFIGELMKQSERCIDEGMHP 115