Miyakogusa Predicted Gene
- Lj0g3v0101269.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101269.1 Non Chatacterized Hit- tr|F6HVU2|F6HVU2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.38,5e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; DYW_de,CUFF.5680.1
(756 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 653 0.0
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 497 e-140
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 487 e-137
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 456 e-128
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-128
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 453 e-127
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 453 e-127
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 438 e-123
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 437 e-122
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 433 e-121
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-119
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 423 e-118
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 423 e-118
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 417 e-116
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 414 e-116
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-114
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 403 e-112
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 402 e-112
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 395 e-110
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-106
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 383 e-106
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 383 e-106
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 383 e-106
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-105
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 372 e-103
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 368 e-101
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 365 e-101
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-100
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 360 2e-99
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 5e-99
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 7e-99
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 7e-99
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 9e-97
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 351 1e-96
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 6e-96
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 2e-95
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 346 3e-95
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 6e-95
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 3e-94
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 7e-94
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 1e-93
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 340 3e-93
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 334 1e-91
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 3e-91
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 332 5e-91
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 331 9e-91
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 330 2e-90
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 5e-90
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 6e-90
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 3e-89
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 324 2e-88
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 4e-88
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 3e-86
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 2e-85
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 5e-84
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 304 1e-82
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 4e-82
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 3e-81
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 9e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 8e-76
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 9e-76
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 2e-75
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 280 4e-75
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 5e-75
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 6e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 259 6e-69
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 259 7e-69
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 2e-68
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 254 2e-67
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 253 4e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 6e-66
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 247 2e-65
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 243 5e-64
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 5e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 5e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 7e-64
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 233 4e-61
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 2e-60
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 7e-60
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 2e-59
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 2e-59
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 3e-59
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 6e-59
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 220 2e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 6e-57
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 7e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 2e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 211 2e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 2e-53
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 3e-53
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 188 1e-47
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 1e-46
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 7e-44
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 4e-40
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 4e-22
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 89 1e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 73 8e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 2e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 71 2e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 71 3e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 8e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 66 1e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 2e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 64 5e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 63 8e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 9e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 1e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 2e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 60 8e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 2e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 54 4e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 53 7e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/644 (51%), Positives = 426/644 (66%), Gaps = 18/644 (2%)
Query: 40 HLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
LFD P+R+IIS NS ++ F EAR A L + FT+AG L +CG
Sbjct: 103 QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERC 162
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+L LGE +HG V+V G+ +F++N LI+MYSKC +++ A LFD CDE D VSWNS+I+
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI--GKMLHVCAIKL 206
GYVR+G E LLA+MHR GL+ + Y LGS LKACC++ + I G +H KL
Sbjct: 223 GYVRVGAA-EEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
+ ++VV TALLDMYAK G L +A+ +F N YN MI+GFLQ ++ + E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A LF +MQ GL S TFS ++KAC A GRQIHA ICK N Q DEF+G +L++
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y+ GS +DG++CF ST K D+ SWTSMI V+N + E+A L RQ +S +P+E+
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
+S +M CAD AA SGEQIQG+A+K GI F V+ S I MYAKSG++ A F E++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
NPDV ++S MI A HG ANEAL IFE M GIKPN LGVL AC HGGLV +GL+
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
YF+ MK DY I N KH TC+VDLLGR GRL DA+ IL SGF D PV WRALL +CRV+
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641
Query: 567 KDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
KD+++GK +A+R++ELEP A+ SYVLL+NIYND+G A EVR+LM+D+GVKKEP +SW
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701
Query: 627 IEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKL 670
I +G++ H F V D SHP SQ+IY+ LE M + ++F D L
Sbjct: 702 IVIGNQTHSFAVADLSHPSSQMIYTMLETM----DNVDFVDYTL 741
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 218/463 (47%), Gaps = 16/463 (3%)
Query: 92 LGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYV 151
LG+ HG ++ + ++ ++++N+L+NMY KC+ + AR LFD E + +S+NS+I+GY
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 152 RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSN 211
++G + + EL + L +T AL C L+ +G++LH + L+
Sbjct: 125 QMG-FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD-LGELLHGLVVVNGLSQQ 182
Query: 212 MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
+ + L+DMY+K G L A+ +F+ + +N++I+G+ V G A E L L
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGY-----VRVGAAEEPLNLL 237
Query: 272 CEMQMLGLNCSKFTFSSIVKAC---VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
+M GLN + + S++KAC + G G IH K ++ D V +L+D Y
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF-----ETALSLLRQFMASGRKPD 383
+ GS+ + I+ F+ P +VV++ +MI+G ++ + A L G +P
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
S V+ C+ G QI K + + ++ I +YA G + F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
D+ SW+ MI C+ + A +F + S I+P T+ +++AC+ +
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD 546
G + K GI A T + + ++G + A + ++
Sbjct: 478 GEQIQGYAIKS-GIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 141/314 (44%), Gaps = 14/314 (4%)
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCS--KFTFSSI 289
+L F + + N+ ++++ +R V GY L C+ + L+ K F +
Sbjct: 2 LLQFRAKTFFNNIAQDSLVTLITKR--VGLGY--RFLSSLCQPKNTALDSEGYKILFQTA 57
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV 349
K+ G G+ H + K +L ++ +L++ Y + + F+ P+ ++
Sbjct: 58 AKS----GSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNI 113
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
+S+ S+I+G + G +E A+ L + + K D+F + +G C + GE + G
Sbjct: 114 ISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGL 173
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEA 469
+ G+S + + N I MY+K G +D A F + D VSW+ +I G A E
Sbjct: 174 VVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEP 233
Query: 470 LRIFELMTVSGIKPNHITLLGVLTACS---HGGLVDEGLRYFEIMKKDYGITANVKHSTC 526
L + M G+ L VL AC + G +++G+ K G+ ++ T
Sbjct: 234 LNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK-LGMEFDIVVRTA 292
Query: 527 IVDLLGRAGRLEDA 540
++D+ + G L++A
Sbjct: 293 LLDMYAKNGSLKEA 306
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/682 (39%), Positives = 390/682 (57%), Gaps = 9/682 (1%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
TF +LA +L LG+ +H L G+D M+ V NSLINMY K ++ AR +FD
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
E D +SWNS+IAG + G V L ++ R GL YT+ S LKA +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVC-LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM-YNTMIAGFL 254
K +HV AIK++ S+ V TAL+D Y++ C+ +A ++FE R++ D + +N M+AG+
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE--RHNFDLVAWNAMMAGYT 493
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
Q + L LF M G FT +++ K C + G+Q+HA K
Sbjct: 494 QSHD-----GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
D +V ++D Y G + F+S P D V+WT+MI+GC+ENG+ E A + Q
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
G PDEF ++++ + + A G QI ALK +N V S + MYAK G
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
ID A F+ IE ++ +W+ M+ A HG E L++F+ M GIKP+ +T +GVL+A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
CSH GLV E ++ M DYGI ++H +C+ D LGRAG ++ A+ I
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
M+R LL ACRV DT GK +A +++ELEP +++YVLL N+Y A K R +M+
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848
Query: 615 DQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDI 674
VKK+PG SWIEV +K+H+F+VDDRS+ ++LIY ++++M+ I + + E +
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Query: 675 SGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKI 734
E + +HSEKLAV FG++S P S P+RVIKNLRVC DCH MK I+K+ R+I
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968
Query: 735 ILRDAIRFHHFKEGLCSCKDYW 756
+LRDA RFH FK+G+CSC DYW
Sbjct: 969 VLRDANRFHRFKDGICSCGDYW 990
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/547 (24%), Positives = 228/547 (41%), Gaps = 63/547 (11%)
Query: 36 TRTLHLFDETPQRSIISCNS----------------PASLLAFREARIAGLPVSDFTFAG 79
T +FD+ P R ++S NS + L FR R + S T +
Sbjct: 91 TYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSP 150
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELD 139
+L C + + E+ HG G+DG FV +L+N+Y K +++ +VLF+ D
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 140 DVSWNSIIAGYVRLGDGFR-EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
V WN ++ Y+ + GF+ E +L + H SGL+ ++ TL + D
Sbjct: 211 VVLWNLMLKAYLEM--GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG----- 263
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFE-SFRYHNDFMYNTMIAGFLQRQ 257
+K N N DA V E FR N ++ +L
Sbjct: 264 ----QVKSFANGN------------------DASSVSEIIFR-------NKGLSEYLH-- 292
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
G L F +M + C + TF ++ V + G+Q+H K L
Sbjct: 293 ---SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
V SL++ Y F++ + D++SW S+IAG +NG A+ L Q +
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 378 SGRKPDEFIMSSVMGVCADMAAARS-GEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
G KPD++ M+SV+ + + S +Q+ A+K + V + I Y+++ +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
A + F E N D+V+W+ M+ ++ L++F LM G + + TL V C
Sbjct: 470 EAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
+++G + K G ++ S+ I+D+ + G + A +F DS D V W
Sbjct: 529 FLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMS-AAQFAFDSIPVPDDVAW 586
Query: 557 RALLGAC 563
++ C
Sbjct: 587 TTMISGC 593
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 212/490 (43%), Gaps = 48/490 (9%)
Query: 79 GVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL 138
G L ++ +L LG+ H +L + F++N+LI+MYSKC + AR +FD +
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 139 DDVSWNSIIAGYVRLGDGFREVFE---LLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
D VSWNSI+A Y + + E + LL R+ R + ++ S + C+
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
+ H A K+ L+ + V AL+++Y K G + + ++FE Y + ++N M+ +L+
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
G+ EA+ L GLN ++ T + + GD Q+ +
Sbjct: 224 -----MGFKEEAIDLSSAFHSSGLNPNEITLRLLARIS---GDDSDAGQVKS-------- 267
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
F + +D ++ +++ ++ + +G++ L
Sbjct: 268 ---------------FANGND------ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM 306
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
+ S + D+ ++ + + G+Q+ ALK G+ + V NS I MY K
Sbjct: 307 VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF 366
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
AR F + D++SW+ +I A +G EA+ +F + G+KP+ T+ VL A
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426
Query: 496 SHGGLVDEGLRYFEIMKKDYGITANVKH---STCIVDLLGRAGRLEDAKRFILDSGFADD 552
S + EGL + + NV ST ++D R +++A+ F D
Sbjct: 427 SS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--D 481
Query: 553 PVMWRALLGA 562
V W A++
Sbjct: 482 LVAWNAMMAG 491
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/732 (36%), Positives = 419/732 (57%), Gaps = 29/732 (3%)
Query: 41 LFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE +R++++ + S L F + G + FTFA L
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
G +H V+ G+D I V NSLIN+Y KC + AR+LFD + V+WNS+I+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y G E + M + + S+ + S +K C K L + LH +K
Sbjct: 270 YAANGLDL-EALGMFYSMRLNYVRLSESSFASVIKLCANLKELR-FTEQLHCSVVKYGFL 327
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFR-YHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+ + TAL+ Y+K + DA+ +F+ N + MI+GFLQ EA+
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG-----KEEAV 382
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
LF EM+ G+ ++FT+S I+ A I + ++HAQ+ K N + VG +L+D Y
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
G +++ + F+ D+V+W++M+AG + G+ E A+ + + G KP+EF S
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 389 SVMGVCADMAAAR-SGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
S++ VCA A+ G+Q G+A+K + + + V ++ + MYAK G+I+SA F+
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
D+VSW+ MI A HG A +AL +F+ M +K + +T +GV AC+H GLV+EG +Y
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK 567
F+IM +D I +H++C+VDL RAG+LE A + I + +WR +L ACRVHK
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
T +G+ A+++I ++P +A+YVLL N+Y ++G + +VRKLM ++ VKKEPG SWI
Sbjct: 679 KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Query: 628 EVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNGIVGM 685
EV +K + FL DRSHP+ IY +LE++ ++ + + + + DI + +
Sbjct: 739 EVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV--L 796
Query: 686 SHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHF 745
+ HSE+LA+ FG+I+ PK +P+ +IKNLRVC DCH+ +KLI+K+E+R+I++RD+ RFHHF
Sbjct: 797 AQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHF 856
Query: 746 -KEGLCSCKDYW 756
+G+CSC D+W
Sbjct: 857 SSDGVCSCGDFW 868
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/551 (24%), Positives = 251/551 (45%), Gaps = 40/551 (7%)
Query: 40 HLFDETPQR---SIISC---------NSPASLLAFREARIAGLPVSDFTFAGVLAYCGST 87
+LFD++P R S IS A L R+ G+ + F+ VL +
Sbjct: 48 NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL-GMEMDCSIFSSVLKVSATL 106
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
+ G +H + G + V SL++ Y K + R +FD E + V+W ++I
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 148 AGYVR--LGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
+GY R + D EV L RM G + +T +AL ++ + G +H +K
Sbjct: 167 SGYARNSMND---EVLTLFMRMQNEGTQPNSFTFAAAL-GVLAEEGVGGRGLQVHTVVVK 222
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
L+ + V +L+++Y K G + A ++F+ + +N+MI+G+ + G
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY-----AANGLDL 277
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
EALG+F M++ + S+ +F+S++K C + + R Q+H + K D+ + +L+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 326 DFYSFFGSIDDGIRCFNSTPKL-DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
YS ++ D +R F + +VVSWT+MI+G ++N E A+ L + G +P+E
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
F S ++ + S ++ +K V + + Y K G ++ A F
Sbjct: 398 FTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC-SHGGLVDE 503
I++ D+V+WS M+ A G A+++F +T GIKPN T +L C + + +
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 504 GLRYFEIMKKDYGITANVKHSTCI----VDLLGRAGRLEDAKRFILDSGFADDPVMWRAL 559
G ++ + I + + S C+ + + + G +E A+ + D V W ++
Sbjct: 514 GKQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSM 567
Query: 560 LGACRVHKDTM 570
+ H M
Sbjct: 568 ISGYAQHGQAM 578
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/673 (36%), Positives = 371/673 (55%), Gaps = 26/673 (3%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMH 168
+F N+L+ YSK I F+ + D V+WN +I GY G V M
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCL 228
+ + TL + LK + ++ +GK +H IKL S ++VG+ LL MYA GC+
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVS-LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFL---------------QRQTVSC----------GY 263
+DA VF N MYN+++ G L ++ +VS G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
A+EA+ F EM++ GL ++ F S++ AC +G G+QIHA I + N Q +VG +
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD 383
L+D Y + F+ + +VVSWT+M+ G + G+ E A+ + SG PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+ + + CA++++ G Q G A+ G+ +++ V NS + +Y K GDID + F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
E+ D VSW+ M+ A G A E +++F+ M G+KP+ +TL GV++ACS GLV++
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
G RYF++M +YGI ++ H +C++DL R+GRLE+A RFI F D + W LL AC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 564 RVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPG 623
R + +GK A+ +IEL+PH A Y LL +IY GK ++R+ M+++ VKKEPG
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610
Query: 624 ISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIV 683
SWI+ K+H F DD S P IY++LEE+ KI + + + E +
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVK 670
Query: 684 GMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFH 743
+++HSE+LA+ FG+I +P P+RV KNLRVC DCH K IS + R+I++RDA+RFH
Sbjct: 671 MLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFH 730
Query: 744 HFKEGLCSCKDYW 756
FK+G CSC D+W
Sbjct: 731 RFKDGTCSCGDFW 743
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 216/533 (40%), Gaps = 95/533 (17%)
Query: 4 NLIRSQPNPFIPSKFPFLLTLPFSNPVHS----PIRTRTLHLFDETPQRSIISCN----- 54
N+IR+ P P T ++N VH+ T +FD PQ ++ S N
Sbjct: 31 NIIRALPYP---------ETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLA 81
Query: 55 -SPASLLAFREARIAGLP---------------VSDFTFAGVLAY--------------- 83
S A L++ E+ LP +S A V AY
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 84 -------CGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD 136
S ++ LG+ IHG V+ G + + V + L+ MY+ I A+ +F D
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 137 ------------------------------ELDDVSWNSIIAGYVRLGDGFREVFELLAR 166
E D VSW ++I G + G +E E
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA-KEAIECFRE 260
Query: 167 MHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
M GL Y GS L AC ++N GK +H C I+ + ++ VG+AL+DMY K
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAIN-EGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 227 CLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTF 286
CL A VF+ + N + M+ G+ Q G A EA+ +F +MQ G++ +T
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQ-----TGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK 346
+ AC + G Q H + L V SLV Y G IDD R FN
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 347 LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ- 405
D VSWT+M++ + G+ + L + + G KPD ++ V+ C+ G++
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSA-RLTFQEIENPDVVSWSEMI 457
+ ++GI I + I ++++SG ++ A R PD + W+ ++
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 146/308 (47%), Gaps = 11/308 (3%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
FRE ++ GL + + F VL CG + G+ IH ++ T I+V ++LI+MY K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
CK + A+ +FD + + VSW +++ GY + G E ++ M RSG+D YTLG
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA-EEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
A+ AC SL G H AI L + V +L+ +Y K G + D+ +F
Sbjct: 377 AISACANVSSLE-EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
+ + M++ + Q G A E + LF +M GL T + ++ AC G
Sbjct: 436 DAVSWTAMVSAYAQ-----FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 302 GRQIHAQICKKNLQCDEFVG--CSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAG 358
G Q + ++ +G ++D +S G +++ +R N P D + WT++++
Sbjct: 491 G-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 359 CVENGKFE 366
C G E
Sbjct: 550 CRNKGNLE 557
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/730 (34%), Positives = 394/730 (53%), Gaps = 22/730 (3%)
Query: 40 HLFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTR 88
H+F QR ++ N+ + L+ F+ + GL T A ++ C +
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L G+ +H G + +L+N+Y+KC IE A F + + V WN ++
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
Y L D R F + +M + + YT S LK C L +G+ +H IK +
Sbjct: 464 AYGLLDD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE-LGEQIHSQIIKTNF 521
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
N V + L+DMYAK G L A + F + + TMIAG+ Q + +AL
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN-----FDDKAL 576
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
F +M G+ + ++ V AC + + G+QIHAQ C D +LV Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
S G I++ F T D ++W ++++G ++G E AL + + G + F
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP 448
S + ++ A + G+Q+ K G + V N+ I MYAK G I A F E+
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
+ VSW+ +I + HGF +EAL F+ M S ++PNH+TL+GVL+ACSH GLVD+G+ YF
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
E M +YG++ +H C+VD+L RAG L AK FI + D ++WR LL AC VHK+
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 569 TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
+G+ A ++ELEP +A+YVLL N+Y + K R+ M+++GVKKEPG SWIE
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 629 VGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDE--KLPMDISGTELNGIVGMS 686
V + +H F V D++HP++ I+ +++ + ++I + + L ++ + + I+ +
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI- 995
Query: 687 HHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFK 746
HSEKLA++FG++SLP + P+ V+KNLRVC+DCH +K +SK+ R+II+RDA RFHHF+
Sbjct: 996 -HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFE 1054
Query: 747 EGLCSCKDYW 756
G CSCKDYW
Sbjct: 1055 GGACSCKDYW 1064
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 246/539 (45%), Gaps = 31/539 (5%)
Query: 41 LFDETPQRSIISCNSPASLLAFRE--ARIAGLPV---------SDFTFAGVLAYC-GSTR 88
+FDE P+R+I + N LA R + GL V ++ TF+GVL C G +
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ E IH +L G+ V N LI++YS+ ++ AR +FD D SW ++I+
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G + + E L M+ G+ + Y S L AC +SL IG+ LH +KL
Sbjct: 262 GLSK-NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE-IGEQLHGLVLKLGF 319
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+S+ V AL+ +Y G L A +F + + YNT+I G Q CGY +A+
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ-----CGYGEKAM 374
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
LF M + GL T +S+V AC A G G+Q+HA K + + +L++ Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
+ I+ + F T +VV W M+ + + RQ P+++
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC-----MYAKSGDIDSARLTFQ 443
S++ C + GEQI +K +NF + N+ +C MYAK G +D+A
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIK---TNFQL--NAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
DVVSW+ MI + F ++AL F M GI+ + + L ++AC+ + E
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
G + G ++++ +V L R G++E++ + A D + W AL+
Sbjct: 610 G-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES-YLAFEQTEAGDNIAWNALVSG 666
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 233/509 (45%), Gaps = 16/509 (3%)
Query: 61 AFREARI-----AGLPVSDFTFAGVLAYCGSTR-NLRLGEAIHGSVLVTGMDGMIFVMNS 114
+F+E RI G+ + T +L C T +L G +H +L G+D +
Sbjct: 66 SFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEK 125
Query: 115 LINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF 174
L + Y + A +FD E +WN +I + EVF L RM +
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR-NLIGEVFGLFVRMVSENVTP 184
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
++ T L+AC + + +H + L + VV L+D+Y++ G + A V
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
F+ R + + MI+G + + + EA+ LFC+M +LG+ + + FSS++ AC
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEA-----EAIRLFCDMYVLGIMPTPYAFSSVLSACK 299
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
I G Q+H + K D +V +LV Y G++ F++ + D V++ +
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG 414
+I G + G E A+ L ++ G +PD ++S++ C+ G+Q+ + K G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFE 474
++ ++ + + +YAK DI++A F E E +VV W+ M+ + RIF
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGR 533
M + I PN T +L C G ++ G + + +I+K ++ + A V + ++D+ +
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAK 537
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGA 562
G+L+ A ++ D V W ++
Sbjct: 538 LGKLDTAWDILIRFA-GKDVVSWTTMIAG 565
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 268/745 (35%), Positives = 407/745 (54%), Gaps = 38/745 (5%)
Query: 41 LFDETPQRSIISCNSPASLL-----------AFREARIAGLPVSDFTFAGVLAYCGS--- 86
+FD +R+ +S NS S L AFR + S FT V+ C +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
L +G+ +H L G + F++N+L+ MY K ++ +++VL + D V+WN++
Sbjct: 215 PEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
++ + + E E L M G++ ++T+ S L AC + L GK LH A+K
Sbjct: 274 LSSLCQ-NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT-GKELHAYALKN 331
Query: 207 -DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
L+ N VG+AL+DMY + VF+ ++N MIAG+ Q + + +
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE-----HDK 386
Query: 266 EALGLFCEMQ-MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
EAL LF M+ GL + T + +V ACV G F IH + K+ L D FV +L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK--- 381
+D YS G ID +R F D+V+W +MI G V + E AL LL + RK
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 382 --------PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
P+ + +++ CA ++A G++I +A+K ++ + V ++ + MYAK G
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566
Query: 434 DIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLT 493
+ +R F +I +V++W+ +I HG EA+ + +M V G+KPN +T + V
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF--ILDSGFAD 551
ACSH G+VDEGLR F +MK DYG+ + H C+VDLLGRAGR+++A + ++ F +
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF-N 685
Query: 552 DPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRK 611
W +LLGA R+H + +G+ A +I+LEP+ A+ YVLL NIY+ AG +A EVR+
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 612 LMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLP 671
M++QGV+KEPG SWIE G +VH F+ D SHP S+ + LE + ++ K + +
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805
Query: 672 MDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEK 731
+ + E + + HSEKLA+ FGI++ +RV KNLRVC+DCH+ K ISK+
Sbjct: 806 VLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 865
Query: 732 RKIILRDAIRFHHFKEGLCSCKDYW 756
R+IILRD RFH FK G CSC DYW
Sbjct: 866 REIILRDVRRFHRFKNGTCSCGDYW 890
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 266/599 (44%), Gaps = 55/599 (9%)
Query: 14 IPSKFPFLLTL-PFSNPVHSPIRTRTLHLFDE--------TPQRSIISCNSPA------- 57
+PS FPF L PFS H + T E P I SP
Sbjct: 11 LPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLR 70
Query: 58 ----------SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMD- 106
++L + + + G+ ++ F +L +++ LG+ IH V G
Sbjct: 71 SKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGV 130
Query: 107 GMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLAR 166
+ V N+L+N+Y KC A +FD E + VSWNS+I+ + + E
Sbjct: 131 DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF-EKWEMALEAFRC 189
Query: 167 MHRSGLDFSDYTLGSALKACC---VDKSLNCIGKMLHVCAI-KLDLNSNMVVGTALLDMY 222
M ++ S +TL S + AC + + L +GK +H + K +LNS ++ L+ MY
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGL-MMGKQVHAYGLRKGELNSFII--NTLVAMY 246
Query: 223 AKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCS 282
K G L + ++ SF + +NT+++ Q + + EAL EM + G+
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL-----LEALEYLREMVLEGVEPD 301
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICKK-NLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
+FT SS++ AC + R G+++HA K +L + FVG +LVD Y + G R F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-GRKPDEFIMSSVMGVCADMAAA 400
+ + W +MIAG +N + AL L S G + M+ V+ C A
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 401 RSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCN 460
E I G+ +K G+ VQN+ + MY++ G ID A F ++E+ D+V+W+ MI
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 461 AHHGFANEALRIFELM-----------TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFE 509
+AL + M + +KPN ITL+ +L +C+ + +G
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 510 IMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
K+ + +V + +VD+ + G L+ +++ + D + + W ++ A +H +
Sbjct: 542 YAIKN-NLATDVAVGSALVDMYAKCGCLQMSRK-VFDQIPQKNVITWNVIIMAYGMHGN 598
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 15/242 (6%)
Query: 352 WTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWAL 411
W ++ V + A+ + G KPD + +++ AD+ G+QI
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 412 KFGIS-NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEAL 470
KFG + + V N+ + +Y K GD + F I + VSW+ +I AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 471 RIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD---YGITANVKHS--- 524
F M ++P+ TL+ V+TACS+ + EGL +M K YG+ +S
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGL----MMGKQVHAYGLRKGELNSFII 239
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA-CRVHKDTMMGKHIADRVIE-L 582
+V + G+ G+L +K +L S D V W +L + C+ + +++ + V+E +
Sbjct: 240 NTLVAMYGKLGKLASSK-VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 583 EP 584
EP
Sbjct: 299 EP 300
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/698 (38%), Positives = 391/698 (56%), Gaps = 18/698 (2%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTG-MDGMIFVMNSLINMYSKCKR-IE 126
GL +D+ + V+ C ++ + +G G ++ TG + + V SLI+M+ K + E
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 127 AARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
A +FD EL+ V+W +I +++G RE M SG + +TL S AC
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFP-REAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK---TGCLTDAVLVFESFRYHND 243
++L+ +GK LH AI+ L + V +L+DMYAK G + D VF+ H+
Sbjct: 280 AELENLS-LGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 244 FMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTFSSIVKACVAIGDFRAG 302
+ +I G+++ +C A EA+ LF EM G + + FTFSS KAC + D R G
Sbjct: 337 MSWTALITGYMK----NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
+Q+ Q K+ L + V S++ + ++D R F S + ++VS+ + + G N
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
FE A LL + F +S++ A++ + R GEQI +K G+S V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIK 482
N+ I MY+K G ID+A F +EN +V+SW+ MI A HGFA L F M G+K
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
PN +T + +L+ACSH GLV EG R+F M +D+ I ++H C+VDLL RAG L DA
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 543 FILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGK 602
FI F D ++WR LGACRVH +T +GK A +++EL+P+ A+Y+ L NIY AGK
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGK 692
Query: 603 EKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK 662
+ + E+R+ M+++ + KE G SWIEVG K+H F V D +HP + IY L+ ++ +I +
Sbjct: 693 WEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR 752
Query: 663 IEF-GDEKL---PMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSD 718
+ D L ++ E + HSEK+AV FG+IS KS PVRV KNLRVC D
Sbjct: 753 CGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGD 812
Query: 719 CHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
CH MK IS + R+I+LRD RFHHFK+G CSC DYW
Sbjct: 813 CHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 261/540 (48%), Gaps = 30/540 (5%)
Query: 21 LLTLPFSNPVHSPIRTRT-----LHLFDETPQRSIISCNSPASLLAFR-EARIAGLPVSD 74
+++ F +P PI+++ +++ D R + + + ++ A AR P+
Sbjct: 3 MISFSFPSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDS 62
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
TF+ +L C R+ RLG+ +H ++ ++ + NSLI++YSK A +F+T
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 135 CDEL---DDVSWNSIIAGYVRLGDGFREV--FELLARMHRSGLDFSDYTLGSALKACCVD 189
D VSW++++A Y G+ RE+ ++ GL +DY + ++AC +
Sbjct: 123 MRRFGKRDVVSWSAMMACY---GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS-N 178
Query: 190 KSLNCIGKMLHVCAIKL-DLNSNMVVGTALLDMYAK-TGCLTDAVLVFESFRYHNDFMYN 247
+G++ +K S++ VG +L+DM+ K +A VF+ N +
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
MI +Q G+ REA+ F +M + G KFT SS+ AC + + G+Q+H+
Sbjct: 239 LMITRCMQ-----MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 308 QICKKNLQCDEFVGCSLVDFY---SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGK 364
+ L D V CSLVD Y S GS+DD + F+ V+SWT++I G ++N
Sbjct: 294 WAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 365 FET-ALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
T A++L + + G +P+ F SS C +++ R G+Q+ G A K G+++ V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIK 482
NS I M+ KS ++ A+ F+ + ++VS++ + + +A ++ +T +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
+ T +L+ ++ G + +G + + K G++ N ++ + + G ++ A R
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASR 530
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 178/392 (45%), Gaps = 27/392 (6%)
Query: 285 TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG---SIDDGIRCF 341
TFSS++K+C+ DFR G+ +HA++ + +++ D + SL+ YS G +D
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
K DVVSW++M+A NG+ A+ + +F+ G P+++ ++V+ C++
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 402 SGEQIQGWALKFG-ISNFIIVQNSQICMYAK-SGDIDSARLTFQEIENPDVVSWSEMICC 459
G G+ +K G + + V S I M+ K ++A F ++ +VV+W+ MI
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 460 NAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITA 519
GF EA+R F M +SG + + TL V +AC+ + G + + G+
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVD 302
Query: 520 NVKHSTCIVDLLGRA---GRLEDAKRFILDSGFADDPVM-WRALLGACRVHKDTMMGKHI 575
+V+ S +VD+ + G ++D ++ + D D VM W AL+ M ++
Sbjct: 303 DVECS--LVDMYAKCSADGSVDDCRK-VFDR-MEDHSVMSWTALITG------YMKNCNL 352
Query: 576 ADRVIEL------EPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
A I L + H ++ + + G V K + Q K+ +
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP-RVGKQVLGQAFKRGLASNSSVA 411
Query: 630 GSKVHMFLVDDRSHPMSQLIYSRLEEMLVKIN 661
S + MF+ DR + S E+ LV N
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYN 443
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 116/305 (38%), Gaps = 46/305 (15%)
Query: 363 GKFETALSLLRQFMASGRKP-DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
G A+S L G +P D SS++ C R G+ + ++F I ++
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 422 QNSQICMYAKSGDIDSARLTFQEIE---NPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
NS I +Y+KSGD A F+ + DVVSWS M+ C ++G +A+++F
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 479 SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA---- 534
G+ PN V+ ACS+ V G + K ++V ++D+ +
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 535 ----------------------------GRLEDAKRFILD---SGFADDPVMWRALLGAC 563
G +A RF LD SGF D ++ AC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 564 RVHKDTMMGKHIADRVIE--LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
++ +GK + I L S V +Y + G +V M+D V
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV--- 336
Query: 622 PGISW 626
+SW
Sbjct: 337 --MSW 339
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/728 (36%), Positives = 391/728 (53%), Gaps = 49/728 (6%)
Query: 74 DFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD 133
++TF V CG ++R GE+ H LVTG +FV N+L+ MYS+C+ + AR +FD
Sbjct: 127 NYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 134 TCDELDDVSWNSIIAGYVRLGDGFREVFELLARM-HRSGLDFSDYTLGSALKACCVDKSL 192
D VSWNSII Y +LG + E+ +RM + G + TL + L C
Sbjct: 187 EMSVWDVVSWNSIIESYAKLGKP-KVALEMFSRMTNEFGCRPDNITLVNVLPPC-ASLGT 244
Query: 193 NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG 252
+ +GK LH A+ ++ NM VG L+DMYAK G + +A VF + + +N M+AG
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 253 F---------------LQRQTVS----------CGYAR-----EALGLFCEMQMLGLNCS 282
+ +Q + + GYA+ EALG+ +M G+ +
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICK------KNLQCDE-FVGCSLVDFYSFFGSID 335
+ T S++ C ++G G++IH K KN DE V L+D Y+ +D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 336 DGIRCFNS-TPK-LDVVSWTSMIAGCVENGKFETALSLLRQFMASG--RKPDEFIMSSVM 391
F+S +PK DVV+WT MI G ++G AL LL + +P+ F +S +
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 392 GVCADMAAARSGEQIQGWALKFGISNF-IIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
CA +AA R G+QI +AL+ + + V N I MYAK G I ARL F + +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEI 510
V+W+ ++ HG+ EAL IF+ M G K + +TLL VL ACSH G++D+G+ YF
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 511 MKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTM 570
MK +G++ +H C+VDLLGRAGRL A R I + PV+W A L CR+H
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 571 MGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVG 630
+G++ A+++ EL + SY LL N+Y +AG+ K +R LM+ +GVKK PG SW+E
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
Query: 631 SKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNGIVGMSHH 688
F V D++HP ++ IY L + + +I I + E D+ E + + + H
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDL--LFEH 782
Query: 689 SEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEG 748
SEKLA+ +GI++ P+ A +R+ KNLRVC DCH +S++ IILRD+ RFHHFK G
Sbjct: 783 SEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNG 842
Query: 749 LCSCKDYW 756
CSCK YW
Sbjct: 843 SCSCKGYW 850
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 184/434 (42%), Gaps = 69/434 (15%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND--FMYNTMIAGFL 254
K+L + L+L S+ L+ Y GCL+ AV + F + + +N++I
Sbjct: 50 KLLSFGILTLNLTSH------LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI---- 99
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
R G A + L LF M L +TF + KAC I R G HA
Sbjct: 100 -RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 158
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ FVG +LV YS S+ D + F+ DVVSW S+I + GK + AL + +
Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 375 FMAS-GRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
G +PD + +V+ CA + G+Q+ +A+ + + V N + MYAK G
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 434 DIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT---------------- 477
+D A F + DVVSW+ M+ + G +A+R+FE M
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 478 -------------------VSGIKPNHITLLGVLTACSHGGLVDEG-------LRY-FEI 510
SGIKPN +TL+ VL+ C+ G + G ++Y ++
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398
Query: 511 MKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD--SGFADDPVMWRALLGACRVHKD 568
K +G V + ++D+ + ++ D R + D S D V W ++G H D
Sbjct: 399 RKNGHGDENMVINQ--LIDMYAKCKKV-DTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 569 TMMGKHIADRVIEL 582
A++ +EL
Sbjct: 456 -------ANKALEL 462
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 205/484 (42%), Gaps = 69/484 (14%)
Query: 41 LFDETPQRSIISCNSP-ASLLAFREARIA-----------GLPVSDFTFAGVLAYCGSTR 88
+FDE ++S NS S + ++A G + T VL C S
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
LG+ +H + + M +FV N L++MY+KC ++ A +F D VSWN+++A
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 149 GYVRLG---DGFR-------------------------------EVFELLARMHRSGLDF 174
GY ++G D R E + +M SG+
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIK--LDL------NSNMVVGTALLDMYAKTG 226
++ TL S L C +L GK +H AIK +DL + NMV+ L+DMYAK
Sbjct: 364 NEVTLISVLSGCASVGAL-MHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCK 421
Query: 227 CLTDAVLVFESF--RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM--QMLGLNCS 282
+ A +F+S + + + MI G+ Q G A +AL L EM + +
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQH-----GDANKALELLSEMFEEDCQTRPN 476
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE-FVGCSLVDFYSFFGSIDDGIRCF 341
FT S + AC ++ R G+QIHA + FV L+D Y+ GSI D F
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
++ + V+WTS++ G +G E AL + + G K D + V+ C+
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 402 SG-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE--IENPDVVSWSEMIC 458
G E FG+S + + ++G +++A +E +E P VV + + C
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 459 CNAH 462
C H
Sbjct: 657 CRIH 660
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 27/321 (8%)
Query: 63 REARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMD-------GMIFVMNSL 115
R+ +G+ ++ T VL+ C S L G+ IH + +D V+N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 116 INMYSKCKRIEAARVLFDTCD--ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLD 173
I+MY+KCK+++ AR +FD+ E D V+W +I GY + GD + ELL+ M
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA-NKALELLSEMFEEDCQ 472
Query: 174 F--SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS-NMVVGTALLDMYAKTGCLTD 230
+ +T+ AL AC +L IGK +H A++ N+ + V L+DMYAK G ++D
Sbjct: 473 TRPNAFTISCALVACASLAALR-IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISD 531
Query: 231 AVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIV 290
A LVF++ N+ + +++ G+ GY EALG+F EM+ +G T ++
Sbjct: 532 ARLVFDNMMAKNEVTWTSLMTGYGMH-----GYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 291 KACVAIGDFRAGRQIHAQICKKNL----QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP- 345
AC G G + ++ K + E C LVD G ++ +R P
Sbjct: 587 YACSHSGMIDQGMEYFNRM--KTVFGVSPGPEHYAC-LVDLLGRAGRLNAALRLIEEMPM 643
Query: 346 KLDVVSWTSMIAGCVENGKFE 366
+ V W + ++ C +GK E
Sbjct: 644 EPPPVVWVAFLSCCRIHGKVE 664
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 262/763 (34%), Positives = 402/763 (52%), Gaps = 108/763 (14%)
Query: 93 GEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD------------------- 133
+ +H V+ +G+ +++MN+L+N+YSK AR LFD
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 134 ------TCD------ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
TC+ + D VSW ++I GY +G + + ++ M + G++ + +TL +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ-YHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK----------------- 224
L + + + GK +H +KL L N+ V +LL+MYAK
Sbjct: 152 VLASVAATRCMET-GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 225 --------------TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
G + A+ FE + +N+MI+GF QR GY AL +
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR-----GYDLRALDI 265
Query: 271 FCEMQMLGL-NCSKFTFSSIVKACVAIGDFRAGRQIHAQICK------------------ 311
F +M L + +FT +S++ AC + G+QIH+ I
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 312 -----------------KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
K+L+ + F +L+D Y G ++ F S DVV+WT+
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFT--ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG 414
MI G ++G + A++L R + G++P+ + +++++ V + +A+ G+QI G A+K G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICCNAHHGFANEALRIF 473
+ V N+ I MYAK+G+I SA F I D VSW+ MI A HG A EAL +F
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
E M + G++P+HIT +GV +AC+H GLV++G +YF++MK I + H C+VDL GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLL 593
AG L++A+ FI D V W +LL ACRVHK+ +GK A+R++ LEP + +Y L
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623
Query: 594 YNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRL 653
N+Y+ GK + A ++RK M+D VKKE G SWIEV KVH+F V+D +HP IY +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Query: 654 EEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNL 713
+++ +I K+ + + + E + HHSEKLA+ FG+IS P +R++KNL
Sbjct: 684 KKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNL 743
Query: 714 RVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
RVC+DCH +K ISKL R+II+RD RFHHFK+G CSC+DYW
Sbjct: 744 RVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 204/507 (40%), Gaps = 91/507 (17%)
Query: 38 TLHLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGS 86
T FD+ PQR +S + ++ + G+ + FT VLA +
Sbjct: 99 TCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA 158
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD------------- 133
TR + G+ +H ++ G+ G + V NSL+NMY+KC A+ +FD
Sbjct: 159 TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAM 218
Query: 134 ------------------TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
E D V+WNS+I+G+ + G R ++ ++M R L
Sbjct: 219 IALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR-ALDIFSKMLRDSLLSP 277
Query: 176 D-YTLGSALKACCVDKSLNCIGKML--HVCAIKLDLNS---NMVVG-------------- 215
D +TL S L AC + L CIGK + H+ D++ N ++
Sbjct: 278 DRFTLASVLSACANLEKL-CIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 216 --------------TALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
TALLD Y K G + A +F S + + + MI G+ Q
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH----- 391
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G EA+ LF M G + +T ++++ ++ G+QIH K V
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
+L+ Y+ G+I R F+ + D VSWTSMI ++G E AL L + G
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICM---YAKSGDIDS 437
+PD V C G Q + + + I + CM + ++G +
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 438 ARLTFQEIE-NPDVVSWSEMI-CCNAH 462
A+ +++ PDVV+W ++ C H
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 196/487 (40%), Gaps = 99/487 (20%)
Query: 178 TLGSALKACC--VDKSLN-----CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTD 230
+L + L+ C + KS+N +++H IK L ++ + L+++Y+KTG
Sbjct: 8 SLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALH 67
Query: 231 AVLVFESFRYHNDFMYNTMIAGFL----------------QRQTVS----------CGYA 264
A +F+ F +NT+++ + QR +VS G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
+A+ + +M G+ ++FT ++++ + A G+++H+ I K L+ + V SL
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 325 VDFYS-------------------------------FFGSIDDGIRCFNSTPKLDVVSWT 353
++ Y+ G +D + F + D+V+W
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 354 SMIAGCVENGKFETALSLLRQFMA-SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
SMI+G + G AL + + + S PD F ++SV+ CA++ G+QI +
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 413 FGISNFIIVQNSQICMYA---------------------------------KSGDIDSAR 439
G IV N+ I MY+ K GD++ A+
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
F +++ DVV+W+ MI HG EA+ +F M G +PN TL +L+ S
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 500 LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRAL 559
+ G + K G +V S ++ + +AG + A R D V W ++
Sbjct: 428 SLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSM 486
Query: 560 LGACRVH 566
+ A H
Sbjct: 487 IIALAQH 493
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 13/256 (5%)
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-QGWALKFGISNFII 420
NG+F L R + SG ++M+++M V + A ++ L+ S
Sbjct: 28 NGRFTAQLVHCR-VIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFS---- 82
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG 480
N+ + Y+K GD+DS F ++ D VSW+ MI + G ++A+R+ M G
Sbjct: 83 -WNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 481 IKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
I+P TL VL + + ++ G + + K G+ NV S ++++ + G A
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVK-LGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 541 KRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDA 600
K F+ D D W A++ +H + ++ ++ + + +N
Sbjct: 201 K-FVFDRMVVRDISSWNAMIA---LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 601 GKEKRALEV-RKLMQD 615
G + RAL++ K+++D
Sbjct: 257 GYDLRALDIFSKMLRD 272
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 256/705 (36%), Positives = 388/705 (55%), Gaps = 14/705 (1%)
Query: 56 PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSL 115
S+ F++ +G+ + +TF+ V S R++ GE +HG +L +G V NSL
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 116 INMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREV-FELLARMHRSGLDF 174
+ Y K +R+++AR +FD E D +SWNSII GYV +G E + +M SG++
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV--SNGLAEKGLSVFVQMLVSGIEI 294
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
T+ S A C D L +G+ +H +K + LLDMY+K G L A V
Sbjct: 295 DLATIVSVF-AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
F + Y +MIAG+ + G A EA+ LF EM+ G++ +T ++++ C
Sbjct: 354 FREMSDRSVVSYTSMIAGYARE-----GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
G+++H I + +L D FV +L+D Y+ GS+ + F+ D++SW +
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 355 MIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
+I G +N ALSL + R PDE ++ V+ CA ++A G +I G+ ++
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
G + V NS + MYAK G + A + F +I + D+VSW+ MI HGF EA+ +F
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
M +GI+ + I+ + +L ACSH GLVDEG R+F IM+ + I V+H CIVD+L R
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLL 593
G L A RFI + D +W ALL CR+H D + + +A++V ELEP YVL+
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLM 708
Query: 594 YNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRL 653
NIY +A K ++ +RK + +G++K PG SWIE+ +V++F+ D S+P ++ I + L
Sbjct: 709 ANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFL 768
Query: 654 EEMLVKINKIEFGDEKLPMD--ISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIK 711
+ V+ IE G L I E+ + HSEKLA+ GIIS +RV K
Sbjct: 769 RK--VRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTK 826
Query: 712 NLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
NLRVC DCH K +SKL +R+I+LRD+ RFH FK+G CSC+ +W
Sbjct: 827 NLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 217/461 (47%), Gaps = 41/461 (8%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE +R +IS NS L F + ++G+ + T V A C +R
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ LG A+H + N+L++MYSKC +++A+ +F + VS+ S+IAG
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y R G E +L M G+ YT+ + L CC L GK +H + DL
Sbjct: 372 YAREGLA-GEAVKLFEEMEEEGISPDVYTVTAVLN-CCARYRLLDEGKRVHEWIKENDLG 429
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
++ V AL+DMYAK G + +A LVF R + +NT+I G+ + +C YA EAL
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY----SKNC-YANEALS 484
Query: 270 LF-CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
LF ++ + + T + ++ AC ++ F GR+IH I + D V SLVD Y
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
+ G++ F+ D+VSWT MIAG +G + A++L Q +G + DE
Sbjct: 545 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV 604
Query: 389 SVMGVCADMAAARSGEQIQGWAL------KFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
S++ C + SG +GW + I + + M A++GD+ A +
Sbjct: 605 SLLYAC-----SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA---Y 656
Query: 443 QEIEN----PDVVSWSEMIC-CNAHHGFA---NEALRIFEL 475
+ IEN PD W ++C C HH A ++FEL
Sbjct: 657 RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 186/393 (47%), Gaps = 14/393 (3%)
Query: 173 DFSDYTLGSALKACCVDKSLNCIGKMLH--VCAIKLDLNSNMVVGTALLDMYAKTGCLTD 230
D TL S L+ C KSL GK + + ++SN+ G+ L MY G L +
Sbjct: 91 DIDPRTLCSVLQLCADSKSLK-DGKEVDNFIRGNGFVIDSNL--GSKLSLMYTNCGDLKE 147
Query: 231 AVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIV 290
A VF+ + +N L + G ++GLF +M G+ +TFS +
Sbjct: 148 ASRVFDEVKIEKALFWN-----ILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 291 KACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVV 350
K+ ++ G Q+H I K VG SLV FY +D + F+ + DV+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 351 SWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWA 410
SW S+I G V NG E LS+ Q + SG + D + SV CAD G +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 411 LKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEAL 470
+K S N+ + MY+K GD+DSA+ F+E+ + VVS++ MI A G A EA+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 471 RIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK-DYGITANVKHSTCIVD 529
++FE M GI P+ T+ VL C+ L+DEG R E +K+ D G V S ++D
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV--SNALMD 440
Query: 530 LLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
+ + G +++A+ + D + W ++G
Sbjct: 441 MYAKCGSMQEAE-LVFSEMRVKDIISWNTIIGG 472
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 223/503 (44%), Gaps = 32/503 (6%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN-----MYSKCKRIEAARV 130
T VL C +++L+ G+ + + G FV++S + MY+ C ++ A
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNG-----FVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
+FD + WN ++ + GD F L +M SG++ YT CV K
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGD-FSGSIGLFKKMMSSGVEMDSYTFS------CVSK 203
Query: 191 SLNCI-----GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
S + + G+ LH +K VG +L+ Y K + A VF+ +
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+N++I G+ VS G A + L +F +M + G+ T S+ C GR +
Sbjct: 264 WNSIINGY-----VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
H+ K ++ +L+D YS G +D F VVS+TSMIAG G
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
A+ L + G PD + +++V+ CA G+++ W + + I V N+
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IKPN 484
+ MYAK G + A L F E+ D++SW+ +I + + +ANEAL +F L+ P+
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 485 HITLLGVLTACSHGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
T+ VL AC+ D+G + IM+ Y +V +S +VD+ + G L A
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS--LVDMYAKCGALLLA-HM 555
Query: 544 ILDSGFADDPVMWRALLGACRVH 566
+ D + D V W ++ +H
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMH 578
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/723 (35%), Positives = 387/723 (53%), Gaps = 53/723 (7%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR----------- 124
TF +L + R+L G+++H + + + ++ N +N+YSKC R
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 125 --------------------IEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELL 164
I AR LFD + D VS+N++I+GY + F + L
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV-LF 128
Query: 165 ARMHRSGLDFSDYTLGSALKACC--VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMY 222
RM + G + +TL + ACC VD + K LH ++ +S V A + Y
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVD-----LIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 223 AKTGCLTDAVLVFESF-RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNC 281
+K G L +AV VF ++ +N+MI + Q + +AL L+ EM G
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE-----GAKALALYKEMIFKGFKI 238
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSID---DGI 338
FT +S++ A ++ GRQ H ++ K + VG L+DFYS G D D
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKF-ETALSLLRQFMASGRKPDEFIMSSVMGVCADM 397
+ F D+V W +MI+G N + E A+ RQ G +PD+ V C+++
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 398 AAARSGEQIQGWALKFGI-SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEM 456
++ +QI G A+K I SN I V N+ I +Y KSG++ AR F + + VS++ M
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 457 ICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYG 516
I A HG EAL +++ M SGI PN IT + VL+AC+H G VDEG YF MK+ +
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK 478
Query: 517 ITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIA 576
I +H +C++DLLGRAG+LE+A+RFI + V W ALLGACR HK+ + + A
Sbjct: 479 IEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAA 538
Query: 577 DRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMF 636
+ ++ ++P AA YV+L N+Y DA K + VRK M+ + ++K+PG SWIEV K H+F
Sbjct: 539 NELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVF 598
Query: 637 LVDDRSHPMSQLIYSRLEEMLVKINKIEF-GDEKLPM--DISGTELNGIVGMSHHSEKLA 693
+ +D SHPM + + LEEM+ K+ K+ + D+K M + E + + + HHSEKLA
Sbjct: 599 VAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLA 658
Query: 694 VTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCK 753
V FG++S + V+KNLR+C DCH +K +S + R+II+RD +RFH FK+G CSC
Sbjct: 659 VAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCG 718
Query: 754 DYW 756
DYW
Sbjct: 719 DYW 721
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 209/476 (43%), Gaps = 31/476 (6%)
Query: 40 HLFDETPQRSIISCNSP-----------ASLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
LFDE PQ +S N+ A+++ F+ R G V FT +G++A C
Sbjct: 95 QLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CD 152
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL-DDVSWNSII 147
+ L + +H + G D V N+ + YSK + A +F DEL D+VSWNS+I
Sbjct: 153 RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMI 212
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI--GKMLHVCAIK 205
Y + +G + L M G +TL S L A SL+ + G+ H IK
Sbjct: 213 VAYGQHKEGAK-ALALYKEMIFKGFKIDMFTLASVLNALT---SLDHLIGGRQFHGKLIK 268
Query: 206 LDLNSNMVVGTALLDMYAKTG---CLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
+ N VG+ L+D Y+K G + D+ VF+ + ++NTMI+G+ + +S
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS-- 326
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF-VG 321
EA+ F +MQ +G +F + AC + +QIH K ++ + V
Sbjct: 327 --EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
+L+ Y G++ D F+ P+L+ VS+ MI G ++G AL L ++ + SG
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 382 PDEFIMSSVMGVCADMAAARSGEQ-IQGWALKFGISNFIIVQNSQICMYAKSGDIDSA-R 439
P++ +V+ CA G++ F I + I + ++G ++ A R
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 440 LTFQEIENPDVVSWSEMI-CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
P V+W+ ++ C H A ELM + + +L + A
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYA 560
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/739 (33%), Positives = 399/739 (53%), Gaps = 25/739 (3%)
Query: 36 TRTLHLFDETPQRSIISCNSPASLLA--------------FREARIAGLPVSDF-TFAGV 80
T L LFD P+R+++S NS + + E G + D T V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 81 LAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDD 140
L C R + LG+ +HG + +D + + N+L++MYSKC I A+++F + +
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS--DYTLGSALKACCVDKSLNCIGKM 198
VSWN+++ G+ GD F++L +M G D + T+ +A+ C + L + K
Sbjct: 359 VSWNTMVGGFSAEGDT-HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL-KE 416
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
LH ++K + N +V A + YAK G L+ A VF R +N +I G Q
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
R +L +M++ GL FT S++ AC + R G+++H I + L+ D
Sbjct: 477 -----PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS 378
FV S++ Y G + F++ +VSW ++I G ++NG + AL + RQ +
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 379 GRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSA 438
G + M V G C+ + + R G + +ALK + + + S I MYAK+G I +
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 439 RLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHG 498
F ++ SW+ MI HG A EA+++FE M +G P+ +T LGVLTAC+H
Sbjct: 652 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 499 GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV-MWR 557
GL+ EGLRY + MK +G+ N+KH C++D+LGRAG+L+ A R + + + V +W+
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 558 ALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG 617
+LL +CR+H++ MG+ +A ++ ELEP +YVLL N+Y GK + +VR+ M +
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Query: 618 VKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGT 677
++K+ G SWIE+ KV F+V +R + I S + +KI+K+ + + + + +
Sbjct: 832 LRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLS 891
Query: 678 ELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILR 737
E I + HSEKLA+T+G+I + +RV KNLR+C DCH KLISK+ +R+I++R
Sbjct: 892 EEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVR 951
Query: 738 DAIRFHHFKEGLCSCKDYW 756
D RFHHFK G+CSC DYW
Sbjct: 952 DNKRFHHFKNGVCSCGDYW 970
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 210/429 (48%), Gaps = 15/429 (3%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
FT+ V+ C ++ +G A+HG V+ TG+ +FV N+L++ Y + A LFD
Sbjct: 188 FTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDI 247
Query: 135 CDELDDVSWNSIIAGYVRLGDGF-REVFELLARMHRSGLD---FSDY-TLGSALKACCVD 189
E + VSWNS+I V +GF E F LL M D D TL + L C +
Sbjct: 248 MPERNLVSWNSMIR--VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
+ + +GK +H A+KL L+ +V+ AL+DMY+K GC+T+A ++F+ N +NTM
Sbjct: 306 REIG-LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLG--LNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
+ GF G + +M G + + T + V C + +++H
Sbjct: 365 VGGFSAE-----GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
K+ +E V + V Y+ GS+ R F+ V SW ++I G ++
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
+L Q SG PD F + S++ C+ + + R G+++ G+ ++ + + V S +
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
+Y G++ + + F +E+ +VSW+ +I +GF + AL +F M + GI+ I+
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 488 LLGVLTACS 496
++ V ACS
Sbjct: 600 MMPVFGACS 608
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 170/363 (46%), Gaps = 17/363 (4%)
Query: 147 IAGYVRLGD---GFREVFELLARMHRSGLDF--SDYTLGSALKACCVDKSLNCIGKMLHV 201
I+ + GD FR V E + S F LG L+A K + K+ +
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
+ L ++ V+ T ++ MYA G D+ VF++ R N F +N +I+ + + +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD- 168
Query: 262 GYAREALGLFCEM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
E L F EM L FT+ ++KAC + D G +H + K L D FV
Sbjct: 169 ----EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFV 224
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
G +LV FY G + D ++ F+ P+ ++VSW SMI +NG E + LL + M
Sbjct: 225 GNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 284
Query: 381 K----PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
PD + +V+ VCA G+ + GWA+K + +++ N+ + MY+K G I
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG--IKPNHITLLGVLTA 494
+A++ F+ N +VVSW+ M+ + G + + M G +K + +T+L +
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Query: 495 CSH 497
C H
Sbjct: 405 CFH 407
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 190/428 (44%), Gaps = 21/428 (4%)
Query: 80 VLAYCGSTRNLRLGEAIH----GSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
+L G +++ +G IH GS + D + +I MY+ C + +R +FD
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDD---VLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNC 194
+ WN++I+ Y R + + EV E M + D +T +KAC +
Sbjct: 147 RSKNLFQWNAVISSYSR-NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG- 204
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
IG +H +K L ++ VG AL+ Y G +TDA+ +F+ N +N+MI F
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKF----TFSSIVKACVAIGDFRAGRQIHAQIC 310
G++ E+ L EM + + T +++ C + G+ +H
Sbjct: 265 DN-----GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALS 370
K L + + +L+D YS G I + F +VVSW +M+ G G
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 371 LLRQFMASGR--KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICM 428
+LRQ +A G K DE + + + VC + S +++ ++LK +V N+ +
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 439
Query: 429 YAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
YAK G + A+ F I + V SW+ +I +A +L M +SG+ P+ T+
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 489 LGVLTACS 496
+L+ACS
Sbjct: 500 CSLLSACS 507
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/733 (32%), Positives = 388/733 (52%), Gaps = 25/733 (3%)
Query: 41 LFDETPQRSIISCNSPASLLA----FREA--------RIAGLPVSD-FTFAGVLAYCGST 87
LFD P R++++ A F EA R + + D TF +L C
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 88 RNLRLGEAIHGSVLVTGMDGMIF--VMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
+H + G D F V N L+ Y + +R++ A VLF+ E D V++N+
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 146 IIAGYVRLGDG-FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
+I GY + DG + E L +M +SG SD+T LKA V +G+ LH ++
Sbjct: 221 LITGYEK--DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-VGLHDFALGQQLHALSV 277
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
+ + VG +LD Y+K + + ++F+ + YN +I+ + Q
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA--- 334
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
+L F EMQ +G + F F++++ + + GRQ+H Q VG SL
Sbjct: 335 --SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
VD Y+ ++ F S P+ VSWT++I+G V+ G L L + S + D+
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
++V+ A A+ G+Q+ + ++ G + + + MYAK G I A F+E
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG 504
+ + + VSW+ +I +A +G A+ F M SG++P+ +++LGVLTACSH G V++G
Sbjct: 513 MPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQG 572
Query: 505 LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACR 564
YF+ M YGIT KH C++DLLGR GR +A++ + + F D +MW ++L ACR
Sbjct: 573 TEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACR 632
Query: 565 VHKDTMMGKHIADRVIELEP-HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPG 623
+HK+ + + A+++ +E AA+YV + NIY AG+ ++ +V+K M+++G+KK P
Sbjct: 633 IHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPA 692
Query: 624 ISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIV 683
SW+EV K+H+F +D++HP I ++ E+ +I + + + + E I
Sbjct: 693 YSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIE 752
Query: 684 GMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFH 743
+ +HSE+LAV F +IS P+ P+ V+KNLR C DCH +KLISK+ KR+I +RD RFH
Sbjct: 753 SLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFH 812
Query: 744 HFKEGLCSCKDYW 756
HF EG+CSC DYW
Sbjct: 813 HFSEGVCSCGDYW 825
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 220/467 (47%), Gaps = 20/467 (4%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHR-SG 171
N++I+ + K + +AR LFD + V+W ++ Y R F E F+L +M R S
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYAR-NSHFDEAFKLFRQMCRSSS 141
Query: 172 LDFSDYTLGSALKACCVDK-SLNCIGKMLHVCAIKLDLNSN--MVVGTALLDMYAKTGCL 228
D+ + L C D N +G+ +H A+KL ++N + V LL Y + L
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
A ++FE + +NT+I G+ + G E++ LF +M+ G S FTFS
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKD-----GLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
++KA V + DF G+Q+HA D VG ++DFYS + + F+ P+LD
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
VS+ +I+ + ++E +L R+ G F ++++ + A++++ + G Q+
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE 468
AL + + V NS + MYAK + A L F+ + VSW+ +I G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGG--LVDEGLRYFEIMKKDYGITANVKHSTC 526
L++F M S ++ + T VL A + L+ + L F I G NV +
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS---GNLENVFSGSG 492
Query: 527 IVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGK 573
+VD+ + G ++DA + + + + V W AL+ A H D G+
Sbjct: 493 LVDMYAKCGSIKDAVQ-VFEEMPDRNAVSWNALISA---HADNGDGE 535
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 32/321 (9%)
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG- 262
IK +++ +++ + G ++ A V++ + N NTMI+G ++ VS
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 263 --------------------YAR-----EALGLFCEMQMLGLNCS---KFTFSSIVKACV 294
YAR EA LF +M +C+ TF++++ C
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM-CRSSSCTLPDHVTFTTLLPGCN 158
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCS--LVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
A Q+HA K + F+ S L+ Y +D F P+ D V++
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
++I G ++G + ++ L + SG +P +F S V+ + G+Q+ ++
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
G S V N + Y+K + R+ F E+ D VS++ +I + +L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 473 FELMTVSGIKPNHITLLGVLT 493
F M G + +L+
Sbjct: 339 FREMQCMGFDRRNFPFATMLS 359
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/685 (33%), Positives = 379/685 (55%), Gaps = 19/685 (2%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMI---FVMNSLINMYSKCKRIEAARVLFDTCD 136
+L C ++ LR+GE+IH ++VT + +NSLIN+Y KC+ AR LFD
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E + VSW +++ GY G F EV +L M SG + + + + C + G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDF-EVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K H C +K L S+ V L+ MY+ +A+ V + Y + ++++ ++G+L+
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE- 214
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
CG +E L + + + T+ S ++ + D Q+H+++ +
Sbjct: 215 ----CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
+ +L++ Y G + R F+ T ++ T+++ ++ FE AL+L +
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
P+E+ + ++ A+++ + G+ + G LK G N ++V N+ + MYAKSG I+
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
AR F + D+V+W+ MI +HHG EAL F+ M +G PN IT +GVL ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
H G V++GL YF + K + + +++H TCIV LL +AG +DA+ F+ + D V W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 557 RALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQ 616
R LL AC V ++ +GK +A+ IE P+ + YVLL NI+ + + + +VR LM ++
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 617 GVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISG 676
GVKKEPG+SWI + ++ H+FL +D HP LIY++++E++ KI + + D++G
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSP-----DVAG 625
Query: 677 T-----ELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEK 731
E +S+HSEKLAV +G+I P+ +P+ V KN+R+C DCH +KLISK+ K
Sbjct: 626 AFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISK 685
Query: 732 RKIILRDAIRFHHFKEGLCSCKDYW 756
R I++RD+ RFHHF +G CSC DYW
Sbjct: 686 RYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 197/438 (44%), Gaps = 25/438 (5%)
Query: 36 TRTLHLFDETPQRSIISC--------NSP---ASLLAFREARIAGLP-VSDFTFAGVLAY 83
R LFD P+R+++S NS L F+ +G ++F V
Sbjct: 86 VRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKS 145
Query: 84 CGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCK-RIEAARVLFDTCDELDDVS 142
C ++ + G+ HG L G+ FV N+L+ MYS C EA RVL D D
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVL-DDLPYCDLSV 204
Query: 143 WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVC 202
++S ++GY+ G F+E ++L + +++ T S+L+ + LN + +H
Sbjct: 205 FSSALSGYLECG-AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLN-LALQVHSR 262
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
++ N+ + AL++MY K G + A VF+ N F+ T++ + Q ++
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF--- 319
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
EAL LF +M + +++TF+ ++ + + + G +H + K + VG
Sbjct: 320 --EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
+LV+ Y+ GSI+D + F+ D+V+W +MI+GC +G AL + + +G P
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 383 DEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR-- 439
+ V+ C+ + G KF + I + + +K+G A
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497
Query: 440 LTFQEIENPDVVSWSEMI 457
+ IE DVV+W ++
Sbjct: 498 MRTAPIE-WDVVAWRTLL 514
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 7/267 (2%)
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQC---DEFVGCSLVDFYSFFGSIDDGIRCFN 342
+ ++K C R G IHA + N D + SL++ Y + F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAAR 401
P+ +VVSW +M+ G +G L L + SG +P+EF+ + V C++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 402 SGEQIQGWALKFGISNFIIVQNSQICMYAK-SGDIDSARLTFQEIENPDVVSWSEMICCN 460
G+Q G LK+G+ + V+N+ + MY+ SG+ ++ R+ ++ D+ +S +
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV-LDDLPYCDLSVFSSALSGY 212
Query: 461 AHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITAN 520
G E L + N++T L L S+ ++ L+ M + +G A
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAE 271
Query: 521 VKHSTCIVDLLGRAGRLEDAKRFILDS 547
V+ ++++ G+ G++ A+R D+
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDT 298
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/683 (35%), Positives = 369/683 (54%), Gaps = 10/683 (1%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
+ F +L CG LR+G+ IHG ++ +G +F M L NMY+KC+++ AR +FD
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
E D VSWN+I+AGY + G R E++ M L S T+ S L A + L
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMA-RMALEMVKSMCEENLKPSFITIVSVLPAVSALR-LIS 253
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
+GK +H A++ +S + + TAL+DMYAK G L A +F+ N +N+MI ++
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
Q + +EA+ +F +M G+ + + + AC +GD GR IH + L
Sbjct: 314 QNEN-----PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ V SL+ Y +D F +VSW +MI G +NG+ AL+ Q
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
+ KPD F SV+ A+++ + I G ++ + + V + + MYAK G
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
I ARL F + V +W+ MI HGF AL +FE M IKPN +T L V++A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
CSH GLV+ GL+ F +MK++Y I ++ H +VDLLGRAGRL +A FI+
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
++ A+LGAC++HK+ + A+R+ EL P +VLL NIY A ++ +VR M
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 615 DQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF-GDEKLPMD 673
QG++K PG S +E+ ++VH F +HP S+ IY+ LE+++ I + + D L +
Sbjct: 669 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLG 728
Query: 674 ISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRK 733
+ + +S HSEKLA++FG+++ + V KNLRVC+DCH K IS + R+
Sbjct: 729 VENDVKEQL--LSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 786
Query: 734 IILRDAIRFHHFKEGLCSCKDYW 756
I++RD RFHHFK G CSC DYW
Sbjct: 787 IVVRDMQRFHHFKNGACSCGDYW 809
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 34/477 (7%)
Query: 41 LFDETPQRSIISCNS-PASLLAFREARIA----------GLPVSDFTFAGVLAYCGSTRN 89
+FD P+R ++S N+ A AR+A L S T VL + R
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ +G+ IHG + +G D ++ + +L++MY+KC +E AR LFD E + VSWNS+I
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
YV+ + +E + +M G+ +D ++ AL AC L G+ +H +++L L+
Sbjct: 312 YVQ-NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE-RGRFIHKLSVELGLD 369
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
N+ V +L+ MY K + A +F + +N MI GF Q G +AL
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN-----GRPIDALN 424
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
F +M+ + FT+ S++ A + + IH + + L + FV +LVD Y+
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
G+I F+ + V +W +MI G +G + AL L + KP+ S
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 390 VMGVCADMAAARSGEQI-----QGWALKFGISNFIIVQNSQICMYAKSGDIDSA-RLTFQ 443
V+ C+ +G + + ++++ + ++ + + + ++G ++ A Q
Sbjct: 545 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHY----GAMVDLLGRAGRLNEAWDFIMQ 600
Query: 444 EIENPDVVSWSEMI-CCNAHH--GFANEAL-RIFELMTVSGIKPNHITLLGVLTACS 496
P V + M+ C H FA +A R+FEL G H+ L + A S
Sbjct: 601 MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG--GYHVLLANIYRAAS 655
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 162/325 (49%), Gaps = 6/325 (1%)
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ 275
T L+ ++ + G + +A VFE + +Y+TM+ GF + + +AL F M+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD-----KALQFFVRMR 127
Query: 276 MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSID 335
+ + F+ ++K C + R G++IH + K D F L + Y+ ++
Sbjct: 128 YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN 187
Query: 336 DGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCA 395
+ + F+ P+ D+VSW +++AG +NG AL +++ KP + SV+ +
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 396 DMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSE 455
+ G++I G+A++ G + + + + + MYAK G +++AR F + +VVSW+
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 456 MICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDY 515
MI + EA+ IF+ M G+KP ++++G L AC+ G ++ G R+ + +
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVEL 366
Query: 516 GITANVKHSTCIVDLLGRAGRLEDA 540
G+ NV ++ + + ++ A
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTA 391
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 4/261 (1%)
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST-PKLDVVSWTSMIAGCVE 361
RQI + K L + F LV + +GS+D+ R F KL+V+ + +M+ G +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL-YHTMLKGFAK 112
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
+ AL + +P + + ++ VC D A R G++I G +K G S +
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
MYAK ++ AR F + D+VSW+ ++ + +G A AL + + M +
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL 232
Query: 482 KPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
KP+ IT++ VL A S L+ G + G + V ST +VD+ + G LE A+
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETAR 291
Query: 542 RFILDSGFADDPVMWRALLGA 562
+ + D + V W +++ A
Sbjct: 292 Q-LFDGMLERNVVSWNSMIDA 311
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/729 (32%), Positives = 386/729 (52%), Gaps = 19/729 (2%)
Query: 40 HLFDETPQRSIISCNSPASLLA----FREA-RIAGL------PVSDFTFAGVLAYCGSTR 88
++FD+ +R IS NS A+ A E+ RI L V+ T + +L+ G
Sbjct: 216 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 275
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ + G IHG V+ G D ++ V N+L+ MY+ R A ++F D +SWNS++A
Sbjct: 276 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+V G + LL M SG + T SAL AC G++LH + L
Sbjct: 336 SFVNDGRSL-DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE-KGRILHGLVVVSGL 393
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
N ++G AL+ MY K G ++++ V + +N +I G+ + + +AL
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-----PDKAL 448
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDF-RAGRQIHAQICKKNLQCDEFVGCSLVDF 327
F M++ G++ + T S++ AC+ GD G+ +HA I + DE V SL+
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 508
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
Y+ G + FN ++++W +M+A +G E L L+ + + G D+F
Sbjct: 509 YAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 568
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
S + A +A G+Q+ G A+K G + + N+ MY+K G+I N
Sbjct: 569 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 628
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
+ SW+ +I HG+ E F M GIKP H+T + +LTACSHGGLVD+GL Y
Sbjct: 629 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAY 688
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK 567
++++ +D+G+ ++H C++DLLGR+GRL +A+ FI + ++WR+LL +C++H
Sbjct: 689 YDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 748
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
+ G+ A+ + +LEP + YVL N++ G+ + VRK M + +KK+ SW+
Sbjct: 749 NLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 808
Query: 628 EVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSH 687
++ KV F + DR+HP + IY++LE++ I + + + E + +
Sbjct: 809 KLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWN 868
Query: 688 HSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKE 747
HSE+LA+ + ++S P+ + VR+ KNLR+CSDCH K +S++ R+I+LRD RFHHF+
Sbjct: 869 HSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFER 928
Query: 748 GLCSCKDYW 756
GLCSCKDYW
Sbjct: 929 GLCSCKDYW 937
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 236/481 (49%), Gaps = 29/481 (6%)
Query: 41 LFDETPQRSIISCNS----------PASLL-AFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F+E P R+++S S P ++ ++ R G+ ++ + + V++ CG ++
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
LG I G V+ +G++ + V NSLI+M ++ A +FD E D +SWNSI A
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 150 YVRLG---DGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
Y + G + FR +F L+ R H D + T S L + G+ +H +K+
Sbjct: 236 YAQNGHIEESFR-IFSLMRRFH----DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
+S + V LL MYA G +A LVF+ + +N+++A F V+ G + +
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF-----VNDGRSLD 345
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
ALGL C M G + + TF+S + AC F GR +H + L ++ +G +LV
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y G + + R P+ DVV+W ++I G E+ + AL+ + G +
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 387 MSSVMGVC---ADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+ SV+ C D+ G+ + + + G + V+NS I MYAK GD+ S++ F
Sbjct: 466 VVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN 523
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
++N ++++W+ M+ NAHHG E L++ M G+ + + L+A + +++E
Sbjct: 524 GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 583
Query: 504 G 504
G
Sbjct: 584 G 584
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 221/465 (47%), Gaps = 36/465 (7%)
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
MY+K R++ AR LFD ++VSWN++++G VR+G + E E +M G+ S +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGL-YLEGMEFFRKMCDLGIKPSSF 59
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
+ S + AC S+ G +H K L S++ V TA+L +Y G ++ + VFE
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 238 FRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIG 297
N + +++ G+ + G E + ++ M+ G+ C++ + S ++ +C +
Sbjct: 120 MPDRNVVSWTSLMVGYSDK-----GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 174
Query: 298 DFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIA 357
D GRQI Q+ K L+ V SL+ G++D F+ + D +SW S+ A
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 358 GCVENGKFETA---LSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG 414
+NG E + SL+R+F + + +S+++ V + + G I G +K G
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFH---DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFE 474
+ + V N+ + MYA +G A L F+++ D++SW+ ++ + G + +AL +
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 475 LMTVSGIKPNHITLLGVLTACS-----------HGGLVDEGLRYFEIMKKDYGITANVKH 523
M SG N++T L AC HG +V GL Y +I+
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII------------ 399
Query: 524 STCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
+V + G+ G + +++R +L D V W AL+G +D
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDED 443
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 251/543 (46%), Gaps = 28/543 (5%)
Query: 40 HLFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTR 88
HLFD P R+ +S N+ S + FR+ G+ S F A ++ CG +
Sbjct: 13 HLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG 72
Query: 89 NL-RLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
++ R G +HG V +G+ ++V +++++Y + +R +F+ + + VSW S++
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
GY G+ EV ++ M G+ ++ ++ + +C + K +G+ + +K
Sbjct: 133 VGYSDKGEP-EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD-ESLGRQIIGQVVKSG 190
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
L S + V +L+ M G + A +F+ + +N++ A + Q G+ E+
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN-----GHIEES 245
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDF 327
+F M+ + T S+++ + + GR IH + K V +L+
Sbjct: 246 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 305
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
Y+ G + F P D++SW S++A V +G+ AL LL ++SG+ +
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
+S + C G + G + G+ I+ N+ + MY K G++ +R ++
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 425
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC-SHGGLVDEGLR 506
DVV+W+ +I A ++AL F+ M V G+ N+IT++ VL+AC G L++ G
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 507 -YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI--LDSGFADDPVMWRALLGAC 563
+ I+ + +VK+S ++ + + G L ++ LD+ + + W A+L A
Sbjct: 486 LHAYIVSAGFESDEHVKNS--LITMYAKCGDLSSSQDLFNGLDN---RNIITWNAMLAAN 540
Query: 564 RVH 566
H
Sbjct: 541 AHH 543
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/736 (32%), Positives = 388/736 (52%), Gaps = 38/736 (5%)
Query: 31 HSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNL 90
H + LHL + R + N L +E AG+ VS +++ + C R+L
Sbjct: 45 HKQGQVENLHLVSLSKHRKL---NEAFEFL--QEMDKAGVSVSSYSYQCLFEACRELRSL 99
Query: 91 RLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGY 150
G +H + + + + + N ++ MY +C+ +E A LFD EL+ VS ++I+ Y
Sbjct: 100 SHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAY 159
Query: 151 VRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS 210
G + L + M SG + LK+ ++L+ G+ +H I+ L S
Sbjct: 160 AEQGI-LDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALD-FGRQIHAHVIRAGLCS 217
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
N + T +++MY K G L A VF+ ++ G+ Q G AR+AL L
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ-----AGRARDALKL 272
Query: 271 FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
F ++ G+ F FS ++KAC ++ + G+QIHA + K L+ + VG LVDFY
Sbjct: 273 FVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIK 332
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP-DEFIMSS 389
S + R F + + VSW+++I+G + +FE A+ + + + F +S
Sbjct: 333 CSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTS 392
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD 449
+ C+ +A G Q+ A+K + +++ I MY+K G +D A F+ ++NPD
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPD 452
Query: 450 VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFE 509
+V+W+ I +A++G A+EALR+FE M G+KPN +T + VLTACSH GLV++G +
Sbjct: 453 IVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLD 512
Query: 510 IMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDT 569
M + Y + + H C++D+ R+G L++A +F+ + F D + W+ L C HK+
Sbjct: 513 TMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNL 572
Query: 570 MMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
+G+ + + +L+P A YVL +N+Y AGK + A E+ KLM ++ +KKE SWI+
Sbjct: 573 ELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQE 632
Query: 630 GSKVHMFLVDDRSHPMSQLIYSRLEEM-------LVKINKIEFGDEKLPMDISGTELNGI 682
K+H F+V D+ HP +Q IY +L+E + + N E ++ L
Sbjct: 633 KGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMTERREQLLD----------- 681
Query: 683 VGMSHHSEKLAVTFGIISLPKS--APVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAI 740
HSE+LA+ FG+IS+ + AP++V KNLR C DCH K +S + +I++RD+
Sbjct: 682 -----HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSR 736
Query: 741 RFHHFKEGLCSCKDYW 756
RFHHFKEG CSC DYW
Sbjct: 737 RFHHFKEGKCSCNDYW 752
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/695 (35%), Positives = 376/695 (54%), Gaps = 24/695 (3%)
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
+GL TF VL C R + G IH L G ++V SLI++YS+ K +
Sbjct: 147 SGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSALKAC 186
AR+LFD D SWN++I+GY + G+ +E L +GL D T+ S L AC
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNA-KEALTL-----SNGLRAMDSVTVVSLLSAC 257
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
N G +H +IK L S + V L+D+YA+ G L D VF+ + +
Sbjct: 258 TEAGDFN-RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 247 NTMIAGF-LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
N++I + L Q + A+ LF EM++ + T S+ +GD RA R +
Sbjct: 317 NSIIKAYELNEQPL------RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 306 HAQICKKNLQCDEF-VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGK 364
+K ++ +G ++V Y+ G +D FN P DV+SW ++I+G +NG
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 365 FETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
A+ + G ++ SV+ C+ A R G ++ G LK G+ + V
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
S MY K G ++ A F +I + V W+ +I C+ HG +A+ +F+ M G+KP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 484 NHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
+HIT + +L+ACSH GLVDEG FE+M+ DYGIT ++KH C+VD+ GRAG+LE A +F
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 544 ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKE 603
I D +W ALL ACRVH + +GK ++ + E+EP +VLL N+Y AGK
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 604 KRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKI 663
+ E+R + +G++K PG S +EV +KV +F +++HPM + +Y L + K+ I
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Query: 664 EF-GDEKLPM-DISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHV 721
+ D + + D+ E I+ MS HSE+LA+ F +I+ P +R+ KNLRVC DCH
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHIL-MS-HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 722 TMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K ISK+ +R+II+RD+ RFHHFK G+CSC DYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 231/462 (50%), Gaps = 23/462 (4%)
Query: 83 YCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVS 142
YC NL+ + +H ++V+ + + L+N+Y + AR FD D +
Sbjct: 63 YC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 143 WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC--CVDKSLNCIGKMLH 200
WN +I+GY R G+ + M SGL T S LKAC +D G +H
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID------GNKIH 173
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS 260
A+K ++ V +L+ +Y++ + +A ++F+ + +N MI+G+ Q
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS---- 229
Query: 261 CGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
G A+EAL L ++ + T S++ AC GDF G IH+ K L+ + FV
Sbjct: 230 -GNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
L+D Y+ FG + D + F+ D++SW S+I N + A+SL ++ S
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG-ISNFIIVQNSQICMYAKSGDIDSAR 439
+PD + S+ + + + R+ +QG+ L+ G I + N+ + MYAK G +DSAR
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITLLGVLTACSHG 498
F + N DV+SW+ +I A +GFA+EA+ ++ +M G I N T + VL ACS
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 499 GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
G + +G++ + K+ G+ +V T + D+ G+ GRLEDA
Sbjct: 465 GALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDA 505
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 242/673 (35%), Positives = 383/673 (56%), Gaps = 12/673 (1%)
Query: 90 LRLGEAIHGSVLVTGM-DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L+ G +HG V+ TG+ D M+ + N L+NMY+KC I AR +F + D VSWNS+I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G + G F E E M R + +TL S+L +C K +G+ +H ++KL +
Sbjct: 389 GLDQNG-CFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK-LGQQIHGESLKLGI 446
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+ N+ V AL+ +YA+TG L + +F S H+ +N++I G L R S EA+
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALARSERSL---PEAV 502
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
F Q G ++ TFSS++ A ++ G+QIH K N+ + +L+ Y
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACY 562
Query: 329 SFFGSIDDGIRCFNS-TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
G +D + F+ + D V+W SMI+G + N AL L+ + +G++ D F+
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
++V+ A +A G ++ +++ + + ++V ++ + MY+K G +D A F +
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITLLGVLTACSHGGLVDEGLR 506
+ SW+ MI A HG EAL++FE M + G P+H+T +GVL+ACSH GL++EG +
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA-CRV 565
+FE M YG+ ++H +C+ D+LGRAG L+ + FI + ++WR +LGA CR
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRA 802
Query: 566 H-KDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGI 624
+ + +GK A+ + +LEP A +YVLL N+Y G+ + ++ RK M+D VKKE G
Sbjct: 803 NGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGY 862
Query: 625 SWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVG 684
SW+ + VHMF+ D+SHP + +IY +L+E+ K+ + + + N
Sbjct: 863 SWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEI 922
Query: 685 MSHHSEKLAVTFGIISLPKSA-PVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFH 743
+S+HSEKLAV F + + S P+R++KNLRVC DCH K ISK+E R+IILRD+ RFH
Sbjct: 923 LSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982
Query: 744 HFKEGLCSCKDYW 756
HF++G CSC D+W
Sbjct: 983 HFQDGACSCSDFW 995
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 215/476 (45%), Gaps = 19/476 (3%)
Query: 97 HGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDG 156
H + +D +++ N+LIN Y + +AR +FD + VSW I++GY R G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE- 82
Query: 157 FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI-GKMLHVCAIKLDLNSNMVVG 215
+E L M + G+ + Y S L+AC S+ + G+ +H KL + VV
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 216 TALLDMYAK-TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM 274
L+ MY K G + A+ F N +N++I+ + Q G R A +F M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ-----AGDQRSAFRIFSSM 197
Query: 275 QMLGLNCSKFTFSSIVKACVAIG--DFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG 332
Q G +++TF S+V ++ D R QI I K L D FVG LV ++ G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 333 SIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-GRKPDEFIM---S 388
S+ + FN + V+ ++ G V E A L + P+ +++ S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFII-VQNSQICMYAKSGDIDSARLTFQEIEN 447
A+ + G ++ G + G+ +F++ + N + MYAK G I AR F + +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR- 506
D VSW+ MI +G EA+ ++ M I P TL+ L++C+ G +
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
+ E +K GI NV S ++ L G L + ++ I S D V W +++GA
Sbjct: 438 HGESLK--LGIDLNVSVSNALMTLYAETGYLNECRK-IFSSMPEHDQVSWNSIIGA 490
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 184/399 (46%), Gaps = 13/399 (3%)
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
LP S FT L+ C S + +LG+ IHG L G+D + V N+L+ +Y++ + R
Sbjct: 412 LPGS-FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
+F + E D VSWNSII R E R+G + T S++ +
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF-SSVLSAVSS 529
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND-FMYNT 248
S +GK +H A+K ++ AL+ Y K G + +F D +N+
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
MI+G++ + ++ +AL L M G F +++++ A ++ G ++HA
Sbjct: 590 MISGYIHNELLA-----KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644
Query: 309 ICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA 368
+ L+ D VG +LVD YS G +D +R FN+ P + SW SMI+G +G+ E A
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 369 LSLLRQFMASGRK-PDEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQI 426
L L G+ PD V+ C+ G + + + +G++ I +
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 427 CMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI--CCNAH 462
+ ++G++D +++ P+V+ W ++ CC A+
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 41 LFDETPQRSIISCNS------------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+F P+ +S NS P +++ F A+ AG ++ TF+ VL+ S
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE-LDDVSWNSII 147
LG+ IHG L + N+LI Y KC ++ +F E D+V+WNS+I
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
+GY+ + + +L+ M ++G + + L A +L G +H C+++
Sbjct: 592 SGYIH-NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE-RGMEVHACSVRAC 649
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
L S++VVG+AL+DMY+K G L A+ F + N + +N+MI+G+ + G EA
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARH-----GQGEEA 704
Query: 268 LGLFCEMQMLGLN-CSKFTFSSIVKACVAIGDFRAG 302
L LF M++ G TF ++ AC G G
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 15/270 (5%)
Query: 280 NCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIR 339
NC +F V++CV G A R H+++ K L D ++ +L++ Y G +
Sbjct: 3 NCVPLSF---VQSCV--GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARK 57
Query: 340 CFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAA 399
F+ P + VSW +++G NG+ + AL LR + G +++ SV+ C ++ +
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 400 AR--SGEQIQGWALKFGISNFIIVQNSQICMYAKS-GDIDSARLTFQEIENPDVVSWSEM 456
G QI G K + +V N I MY K G + A F +IE + VSW+ +
Sbjct: 118 VGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSI 177
Query: 457 ICCNAHHGFANEALRIFELMTVSGIKPNHITLLG-VLTACSHGGLVDEGLRYFEIMK--- 512
I + G A RIF M G +P T V TACS L + +R E +
Sbjct: 178 ISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTI 234
Query: 513 KDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
+ G+ ++ + +V ++G L A++
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 169/396 (42%), Gaps = 48/396 (12%)
Query: 193 NCIG-----KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYN 247
+C+G + H K L+ ++ + L++ Y +TG A VF+ N +
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA--GRQI 305
+++G+ + G +EAL +M G+ +++ F S+++AC IG GRQI
Sbjct: 72 CIVSGYSRN-----GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 306 HAQICKKNLQCDEFVGCSLVDFY-SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGK 364
H + K + D V L+ Y GS+ + F + VSW S+I+ + G
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 365 FETALSLLRQFMASGRKPDEFIMSSVMGVCADMAA--ARSGEQIQGWALKFGISNFIIVQ 422
+A + G +P E+ S++ + R EQI K G+ + V
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGI 481
+ + +AKSG + AR F ++E + V+ + ++ + EA ++F ++ ++ +
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 482 KP-NHITLLGVLTACS-------------HGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
P +++ LL S HG ++ GL F + GI +
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV-----GI------GNGL 355
Query: 528 VDLLGRAGRLEDAKR---FILDSGFADDPVMWRALL 560
V++ + G + DA+R F+ D D V W +++
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDK----DSVSWNSMI 387
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 319/566 (56%), Gaps = 7/566 (1%)
Query: 183 LKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHN 242
LK C V K L G+++H ++ ++V+G LL+MYAK G L +A VFE +
Sbjct: 67 LKKCTVFKLL-IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+ T+I+G+ Q C +AL F +M G + ++FT SS++KA A G
Sbjct: 126 FVTWTTLISGYSQHDR-PC----DALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
Q+H K + VG +L+D Y+ +G +DD F++ + VSW ++IAG
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
E AL L + + G +P F +S+ G C+ G+ + + +K G
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIK 482
N+ + MYAKSG I AR F + DVVSW+ ++ A HGF EA+ FE M GI+
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
PN I+ L VLTACSH GL+DEG Y+E+MKKD GI H +VDLLGRAG L A R
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 543 FILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGK 602
FI + +W+ALL ACR+HK+T +G + A+ V EL+P +V+LYNIY G+
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 603 EKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK 662
A VRK M++ GVKKEP SW+E+ + +HMF+ +D HP + I + EE+L KI +
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 663 IEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVT 722
+ + + + + + V + +HSEK+A+ F +++ P + + + KN+RVC DCH
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTA 599
Query: 723 MKLISKLEKRKIILRDAIRFHHFKEG 748
+KL SK+ R+II+RD RFHHFK+
Sbjct: 600 IKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 212/450 (47%), Gaps = 19/450 (4%)
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
+P + +L C + L G +H +L + I + N+L+NMY+KC +E AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
+F+ + D V+W ++I+GY + D + +M R G +++TL S +KA +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQ-HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
+ C G LH +K +SN+ VG+ALLD+Y + G + DA LVF++ ND +N +
Sbjct: 175 RR-GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
IAG +R +AL LF M G S F+++S+ AC + G G+ +HA +
Sbjct: 234 IAGHARRSGTE-----KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETAL 369
K + F G +L+D Y+ GSI D + F+ K DVVSW S++ ++G + A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY 429
+ G +P+E SV+ C+ G K GI + + +
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Query: 430 AKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHGFANEALRIFELMTVSGIKPN--- 484
++GD++ A +E+ P W ++ C H N L + V + P+
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH---KNTELGAYAAEHVFELDPDDPG 465
Query: 485 -HITLLGVLTACSHGGLVDEGLRYFEIMKK 513
H+ L + + GG ++ R + MK+
Sbjct: 466 PHVILYNIYAS---GGRWNDAARVRKKMKE 492
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
+++++K C GR +HA I + + D +G +L++ Y+ GS+++ + F P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
+ D V+WT++I+G ++ + AL Q + G P+EF +SSV+ A G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGF 465
+ G+ +K G + + V ++ + +Y + G +D A+L F +E+ + VSW+ +I +A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+AL +F+ M G +P+H + + ACS G +++G M K G
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGN 301
Query: 526 CIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
++D+ ++G + DA++ I D D V W +LL A H
Sbjct: 302 TLLDMYAKSGSIHDARK-IFDRLAKRDVVSWNSLLTAYAQH 341
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 19/331 (5%)
Query: 41 LFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F++ PQR ++ + S LL F + G ++FT + V+ + R
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
G +HG + G D + V ++L+++Y++ ++ A+++FD + +DVSWN++IAG
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
+ R G + EL M R G S ++ S AC L GK +H IK
Sbjct: 237 HARRS-GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ-GKWVHAYMIKSGEK 294
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
G LLDMYAK+G + DA +F+ + +N+++ + Q G+ +EA+
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH-----GFGKEAVW 349
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
F EM+ +G+ ++ +F S++ AC G G + + K + + + ++VD
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 330 FFGSIDDGIRCFNSTP-KLDVVSWTSMIAGC 359
G ++ +R P + W +++ C
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/736 (33%), Positives = 391/736 (53%), Gaps = 33/736 (4%)
Query: 38 TLHLFDETPQRSIIS---------CNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
L+LFDE P+R+ +S C P L + G ++ F L S
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQDPIGL--YSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ +H ++ G D FV +LIN YS C +++AR +F+ D V W I++
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC----CVDKSLNCIGKMLHVCAI 204
YV G F + +LL+ M +G ++YT +ALKA D + G++L C +
Sbjct: 221 CYVENG-YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
LD VG LL +Y + G ++DA VF ++ ++ MIA F Q G+
Sbjct: 280 -LDPR----VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN-----GFC 329
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA-GRQIHAQICKKNLQCDEFVGCS 323
EA+ LF M+ + ++FT SSI+ C AIG G Q+H + K D +V +
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGC-AIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD 383
L+D Y+ +D ++ F + VSW ++I G G+ A S+ R+ + +
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
E SS +G CA +A+ G Q+ G A+K + + V NS I MYAK GDI A+ F
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
E+E DV SW+ +I + HG +ALRI ++M KPN +T LGVL+ CS+ GL+D+
Sbjct: 509 EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
G FE M +D+GI ++H TC+V LLGR+G+L+ A + I + ++WRA+L A
Sbjct: 569 GQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSAS 628
Query: 564 RVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPG 623
+ + A+ ++++ P A+YVL+ N+Y A + +RK M++ GVKKEPG
Sbjct: 629 MNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPG 688
Query: 624 ISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNG 681
+SWIE VH F V HP +LI LE + +K + + ++ + +D+ E +
Sbjct: 689 LSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDK 748
Query: 682 IVGMSHHSEKLAVTFGIISLPKSAP-VRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAI 740
+ + HSE+LA+ +G++ +P S + ++KNLR+CSDCH MK+IS + +R +++RD
Sbjct: 749 RLWV--HSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMN 806
Query: 741 RFHHFKEGLCSCKDYW 756
RFHHF G+CSC D+W
Sbjct: 807 RFHHFHAGVCSCGDHW 822
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 248/536 (46%), Gaps = 23/536 (4%)
Query: 35 RTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGE 94
+TR L + ++ S + A L ++ I GL + +L C + +
Sbjct: 12 QTRRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGL--DSHAYGAMLRRCIQKNDPISAK 69
Query: 95 AIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG 154
AIH +L G +F N L+N Y K + A LFD E ++VS+ ++ GY
Sbjct: 70 AIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY---- 125
Query: 155 DGFREVFELLARMHRSGLDFSDYTLGSALKA-CCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
++ L +R+HR G + + + S LK +DK+ C LH +KL +SN
Sbjct: 126 -ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC--PWLHSPIVKLGYDSNAF 182
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
VG AL++ Y+ G + A VFE + ++ +++ +++ GY ++L L
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN-----GYFEDSLKLLSC 237
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M+M G + +TF + +KA + +G F + +H QI K D VG L+ Y+ G
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
+ D + FN PK DVV W+ MIA +NG A+ L + + P+EF +SS++
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 394 CADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSW 453
CA + GEQ+ G +K G I V N+ I +YAK +D+A F E+ + + VSW
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 454 SEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK 513
+ +I + G +A +F + + +T L AC+ +D G++ + K
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 514 DYGITANVKH---STCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
T N K S ++D+ + G ++ A+ + + D W AL+ H
Sbjct: 478 ----TNNAKKVAVSNSLIDMYAKCGDIKFAQS-VFNEMETIDVASWNALISGYSTH 528
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/684 (34%), Positives = 355/684 (51%), Gaps = 15/684 (2%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
T+A ++ R+ R G IHG +V G D + + ++++ MY K R+E AR +FD
Sbjct: 121 TYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRM 180
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARM-HRSGLDFSDYTLGSALKACCVDKSLNC 194
E D + WN++I+GY R + + E ++ + + S TL L A + L
Sbjct: 181 PEKDTILWNTMISGY-RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR- 238
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
+G +H A K S+ V T + +Y+K G + +F FR + YN MI G+
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY- 297
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
S G +L LF E+ + G T S+V G IH K N
Sbjct: 298 ----TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNF 350
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
V +L YS I+ + F+ +P+ + SW +MI+G +NG E A+SL R+
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
S P+ ++ ++ CA + A G+ + + I V + I MYAK G
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
I AR F + + V+W+ MI HG EAL IF M SGI P +T L VL A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
CSH GLV EG F M YG +VKH C+VD+LGRAG L+ A +FI
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
+W LLGACR+HKDT + + +++++ EL+P +VLL NI++ +A VR+ +
Sbjct: 591 VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK 650
Query: 615 DQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDE-KLPM- 672
+ + K PG + IE+G H+F D+SHP + IY +LE++ K+ + + E +L +
Sbjct: 651 KRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALH 710
Query: 673 DISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKR 732
D+ E +V + HSE+LA+ FG+I+ +R+IKNLRVC DCH KLISK+ +R
Sbjct: 711 DVEEEERELMVKV--HSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITER 768
Query: 733 KIILRDAIRFHHFKEGLCSCKDYW 756
I++RDA RFHHFK+G+CSC DYW
Sbjct: 769 VIVVRDANRFHHFKDGVCSCGDYW 792
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
SK T+ K +I Q HAQI + D + L S G+I F
Sbjct: 19 SKNTYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAA 400
S + DV + ++ G N ++LS+ S KP+ + + +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 401 RSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCN 460
R+G I G A+ G + +++ ++ + MY K ++ AR F + D + W+ MI
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 461 AHHGFANEALRIF-ELMTVSGIKPNHITLLGVLTACS 496
+ E++++F +L+ S + + TLL +L A +
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/547 (37%), Positives = 325/547 (59%), Gaps = 14/547 (2%)
Query: 212 MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
M + L++MY K L DA +F+ N + TMI+ + + C ++AL L
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK-----CKIHQKALELL 150
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
M + + +T+SS++++C + D R +H I K+ L+ D FV +L+D ++
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G +D + F+ D + W S+I G +N + + AL L ++ +G ++ ++SV+
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVV 451
C +A G Q +K+ +I+ N+ + MY K G ++ A F +++ DV+
Sbjct: 268 RACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 452 SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM 511
+WS MI A +G++ EAL++FE M SG KPN+IT++GVL ACSH GL+++G YF M
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 512 KKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMM 571
KK YGI +H C++DLLG+AG+L+DA + + + D V WR LLGACRV ++ ++
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445
Query: 572 GKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGS 631
++ A +VI L+P A +Y LL NIY ++ K E+R M+D+G+KKEPG SWIEV
Sbjct: 446 AEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Query: 632 KVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNGIVGMSHHS 689
++H F++ D SHP + +L +++ ++ I + E + D+ G ++ + HHS
Sbjct: 506 QIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED--SLRHHS 563
Query: 690 EKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGL 749
EKLA+ FG+++LP +R+ KNLR+C DCHV KL SKLE R I++RD IR+HHF++G
Sbjct: 564 EKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGK 623
Query: 750 CSCKDYW 756
CSC DYW
Sbjct: 624 CSCGDYW 630
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 24/409 (5%)
Query: 56 PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSL 115
P ++ A + GL T++ ++ C S R + G I + G M+F++N L
Sbjct: 43 PRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVL 102
Query: 116 INMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
INMY K + A LFD + + +SW ++I+ Y + ++ ELL M R + +
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC-KIHQKALELLVLMLRDNVRPN 161
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
YT S L++C + +MLH IK L S++ V +AL+D++AK G DA+ VF
Sbjct: 162 VYTYSSVLRSCNGMSDV----RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA 295
+ + ++N++I GF Q AL LF M+ G + T +S+++AC
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDV-----ALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 296 IGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSM 355
+ G Q H I K + D + +LVD Y GS++D +R FN + DV++W++M
Sbjct: 273 LALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW----AL 411
I+G +NG + AL L + +SG KP+ + V+ C + +G GW ++
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC-----SHAGLLEDGWYYFRSM 385
Query: 412 K--FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI 457
K +GI I + K+G +D A E+E PD V+W ++
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 33/337 (9%)
Query: 40 HLFDETPQRSIISCNSPASLLAFREARIAG-------LPVSD------FTFAGVLAYCGS 86
LFD+ PQR++IS + S A+ + +I L + D +T++ VL C
Sbjct: 117 QLFDQMPQRNVISWTTMIS--AYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
++R+ +H ++ G++ +FV ++LI++++K E A +FD D + WNSI
Sbjct: 175 MSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
I G+ + EL RM R+G TL S L+A C +L +G HV +K
Sbjct: 232 IGGFAQ-NSRSDVALELFKRMKRAGFIAEQATLTSVLRA-CTGLALLELGMQAHVHIVKY 289
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
D ++++ AL+DMY K G L DA+ VF + + ++TMI+G Q GY++E
Sbjct: 290 D--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN-----GYSQE 342
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCS 323
AL LF M+ G + T ++ AC G G + + KK D E GC
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGC- 400
Query: 324 LVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGC 359
++D G +DD ++ N + D V+W +++ C
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/708 (34%), Positives = 363/708 (51%), Gaps = 44/708 (6%)
Query: 84 CGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINM--YSKCKRIEAARVLFDTCDELDDV 141
C S R L+ HG ++ TG + + L M S +E AR +FD + +
Sbjct: 40 CVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHV 201
+WN++I Y D ++ L + S + YT +KA SL+ +G+ LH
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS-LGQSLHG 155
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
A+K + S++ V +L+ Y G L A VF + + + +N+MI GF+Q+
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK----- 210
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G +AL LF +M+ + S T ++ AC I + GRQ+ + I + + + +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 322 CSLVDFYSFFGSIDDGIRCF-------------------------------NSTPKLDVV 350
+++D Y+ GSI+D R F NS P+ D+V
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 351 SWTSMIAGCVENGKFETALSLLRQF-MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
+W ++I+ +NGK AL + + + K ++ + S + CA + A G I +
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEA 469
K GI V ++ I MY+K GD++ +R F +E DV WS MI A HG NEA
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 470 LRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVD 529
+ +F M + +KPN +T V ACSH GLVDE F M+ +YGI KH CIVD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 530 LLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAAS 589
+LGR+G LE A +FI +W ALLGAC++H + + + R++ELEP +
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 590 YVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLI 649
+VLL NIY GK + E+RK M+ G+KKEPG S IE+ +H FL D +HPMS+ +
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 650 YSRLEEMLVKINKIEFGDE-KLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVR 708
Y +L E++ K+ + E + I E ++ HSEKLA+ +G+IS +R
Sbjct: 631 YGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIR 690
Query: 709 VIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
VIKNLRVC DCH KLIS+L R+II+RD RFHHF+ G CSC D+W
Sbjct: 691 VIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 29/361 (8%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLF 132
+ +TF ++ +L LG+++HG + + + +FV NSLI+ Y C +++A +F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 133 DTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSL 192
T E D VSWNS+I G+V+ G + EL +M + S T+ L AC ++L
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDK-ALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 193 NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG 252
G+ + + +N N+ + A+LDMY K G + DA +F++ ++ + TM+ G
Sbjct: 249 E-FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 253 FL----------------QRQTVSC----------GYAREALGLFCEMQML-GLNCSKFT 285
+ Q+ V+ G EAL +F E+Q+ + ++ T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
S + AC +G GR IH+ I K ++ + V +L+ YS G ++ FNS
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
K DV W++MI G +G A+ + + + KP+ ++V C+ E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 406 I 406
+
Sbjct: 488 L 488
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 50/363 (13%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F ++ ++S NS +L F++ + S T GVL+ C RN
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G + + ++ + + N++++MY+KC IE A+ LFD +E D+V+W +++ G
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 150 YVRLGD--GFREVF-------------------------ELLARMH----RSGLDFSDYT 178
Y D REV E L H + + + T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 179 LGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESF 238
L S L AC +L +G+ +H K + N V +AL+ MY+K G L + VF S
Sbjct: 368 LVSTLSACAQVGALE-LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 239 RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
+ F+++ MI G CG EA+ +F +MQ + + TF+++ AC G
Sbjct: 427 EKRDVFVWSAMIGGLAMH---GCG--NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 299 FRAGRQI-HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS-WTSMI 356
+ H + +E +VD G ++ ++ + P S W +++
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 357 AGC 359
C
Sbjct: 542 GAC 544
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/738 (33%), Positives = 386/738 (52%), Gaps = 30/738 (4%)
Query: 36 TRTLHLFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYC 84
TR +FDE P R ++S NS S L + E + + + FT + VL
Sbjct: 158 TRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G+ ++ G+ +HG L +G++ ++ V N L+ MY K +R AR +FD D D VS+N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLD-FSD--YTLGSALKACCVDKSLNCIGKMLHV 201
++I GY++L E+ E RM LD F T+ S L+AC + L+ + K ++
Sbjct: 278 TMICGYLKL-----EMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLS-LAKYIYN 331
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
+K V L+D+YAK G + A VF S + +N++I+G++Q
Sbjct: 332 YMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ-----S 386
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G EA+ LF M ++ T+ ++ + D + G+ +H+ K + D V
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
+L+D Y+ G + D ++ F+S D V+W ++I+ CV G F T L + Q S
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
PD + +CA +AA R G++I L+FG + + + N+ I MY+K G ++++
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 442 FQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLV 501
F+ + DVV+W+ MI +G +AL F M SGI P+ + + ++ ACSH GLV
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 502 DEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
DEGL FE MK Y I ++H C+VDLL R+ ++ A+ FI D +W ++L
Sbjct: 627 DEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLR 686
Query: 562 ACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
ACR D + ++ R+IEL P +L N Y K + +RK ++D+ + K
Sbjct: 687 ACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKN 746
Query: 622 PGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNG 681
PG SWIEVG VH+F D S P S+ IY LE + + K + + P ++S
Sbjct: 747 PGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD--PREVSQNLEEE 804
Query: 682 IVG---MSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRD 738
+ HSE+LA+ FG+++ P++V+KNLRVC DCH KLISK+ R+I++RD
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864
Query: 739 AIRFHHFKEGLCSCKDYW 756
A RFH FK+G CSCKD W
Sbjct: 865 ANRFHLFKDGTCSCKDRW 882
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 235/522 (45%), Gaps = 35/522 (6%)
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVS-WN 144
S+ NL IH V+ G+D F LI+ YS + ++ +F +V WN
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC--VDKSLNCIGKMLHVC 202
SII + + G F E E ++ S + YT S +KAC D + G +++
Sbjct: 76 SIIRAFSKNG-LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM---GDLVYEQ 131
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
+ + S++ VG AL+DMY++ G LT A VF+ + +N++I+G+ S G
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY-----SSHG 186
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
Y EAL ++ E++ + FT SS++ A + + G+ +H K + V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS--GR 380
LV Y F D R F+ D VS+ +MI G + K E +R F+ +
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL---KLEMVEESVRMFLENLDQF 303
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL 440
KPD +SSV+ C + + I + LK G V+N I +YAK GD+ +AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 441 TFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSH--- 497
F +E D VSW+ +I G EA+++F++M + + +HIT L +++ +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 498 ----GGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
GL G++ GI ++ S ++D+ + G + D+ + I S D
Sbjct: 424 LKFGKGLHSNGIK--------SGICIDLSVSNALIDMYAKCGEVGDSLK-IFSSMGTGDT 474
Query: 554 VMWRALLGACRVHKDTMMGKHIAD--RVIELEPHAAASYVLL 593
V W ++ AC D G + R E+ P A V L
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 235/510 (46%), Gaps = 16/510 (3%)
Query: 56 PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSL 115
P +L + + R + + +TF V+ C + +G+ ++ +L G + +FV N+L
Sbjct: 88 PEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNAL 147
Query: 116 INMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
++MYS+ + AR +FD D VSWNS+I+GY G + E E+ + S +
Sbjct: 148 VDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG-YYEEALEIYHELKNSWIVPD 206
Query: 176 DYTLGSALKA---CCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
+T+ S L A V K G+ LH A+K +NS +VV L+ MY K TDA
Sbjct: 207 SFTVSSVLPAFGNLLVVKQ----GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
VF+ + YNTMI G+L+ + V E++ +F E + T SS+++A
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMV-----EESVRMFLE-NLDQFKPDLLTVSSVLRA 316
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
C + D + I+ + K + V L+D Y+ G + FNS D VSW
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
S+I+G +++G A+ L + M + D ++ V +A + G+ + +K
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
GI + V N+ I MYAK G++ + F + D V+W+ +I G L++
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQV 496
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
M S + P+ T L L C+ G + + +G + ++ ++++
Sbjct: 497 TTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYS 555
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGA 562
+ G LE++ R + + D V W ++ A
Sbjct: 556 KCGCLENSSR-VFERMSRRDVVTWTGMIYA 584
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 201/405 (49%), Gaps = 16/405 (3%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR-YHNDFMYNTMIAGFLQ 255
+ +H I L L+S+ L+D Y+ ++ VF N +++N++I F +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
G EAL + +++ ++ K+TF S++KAC + D G ++ QI +
Sbjct: 84 N-----GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
D FVG +LVD YS G + + F+ P D+VSW S+I+G +G +E AL + +
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
S PD F +SSV+ ++ + G+ + G+ALK G+++ ++V N + MY K
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
AR F E++ D VS++ MIC E++R+F L + KP+ +T+ VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRAC 317
Query: 496 SHGGLVDEGLR---YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADD 552
H L D L Y ++K + + + V++ ++D+ + G + A R + +S D
Sbjct: 318 GH--LRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITA-RDVFNSMECKD 372
Query: 553 PVMWRALLGACRVHKDTMMGKHIADRVIELEPHA-AASYVLLYNI 596
V W +++ D M + ++ +E A +Y++L ++
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/700 (34%), Positives = 371/700 (53%), Gaps = 25/700 (3%)
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
+P +L C G +H +L +G + N LI+MY KC+ A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
+FD+ E + VSW+++++G+V GD + L + M R G+ +++T + LKAC +
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGD-LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
+L G +H +K+ + VG +L+DMY+K G + +A VF + +N M
Sbjct: 121 NALE-KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLN--CSKFTFSSIVKACVAIGDFRAGRQIHA 307
IAGF V GY +AL F MQ + +FT +S++KAC + G AG+QIH
Sbjct: 180 IAGF-----VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 308 QICKKNLQC--DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
+ + C + SLVD Y G + + F+ + ++SW+S+I G + G+F
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
A+ L ++ + D F +SS++GV AD A R G+Q+Q A+K V NS
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+ MY K G +D A F E++ DV+SW+ +I HG +++RIF M I+P+
Sbjct: 355 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
+ L VL+ACSH G++ EG F + + +GI V+H C+VDLLGRAGRL++AK I
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Query: 546 DSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKR 605
+ +W+ LL CRVH D +GK + ++ ++ A+YV++ N+Y AG
Sbjct: 475 TMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNE 534
Query: 606 ALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF 665
R+L +G+KKE G+SW+E+ +VH F + SHP++ +I L+E ++ + E
Sbjct: 535 QGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE-EL 593
Query: 666 G------DEKLPMDISGTELNGIVGMSHHSEKLAVTFGIIS---LPKSAPVRVIKNLRVC 716
G E +D E N + HSEKLA+ + + K +RV KNLRVC
Sbjct: 594 GYVYGLKHELHDIDDESKEEN----LRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVC 649
Query: 717 SDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
DCH +K +SK+ K ++RDA+RFH F++G CSC DYW
Sbjct: 650 VDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 203/441 (46%), Gaps = 24/441 (5%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD P+R+++S ++ SL F E G+ ++FTF+ L CG
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G IHG L G + M+ V NSL++MYSKC RI A +F + +SWN++IAG
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 150 YVRLGDGFREVFELLARMHRSGLDF--SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
+V G G + + M + + ++TL S LKAC + GK +H ++
Sbjct: 183 FVHAGYGSK-ALDTFGMMQEANIKERPDEFTLTSLLKACS-STGMIYAGKQIHGFLVRSG 240
Query: 208 LN--SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
+ S+ + +L+D+Y K G L A F+ + ++++I G+ Q G
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE-----GEFV 295
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
EA+GLF +Q L F SSI+ R G+Q+ A K + V S+V
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355
Query: 326 DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEF 385
D Y G +D+ +CF DV+SWT +I G ++G + ++ + + + +PDE
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 386 IMSSVMGVCADMAAARSGEQIQGWALK-FGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
+V+ C+ + GE++ L+ GI + + + ++G + A+
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 445 IE-NPDVVSWSEMICCNAHHG 464
+ P+V W ++ HG
Sbjct: 476 MPIKPNVGIWQTLLSLCRVHG 496
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/683 (35%), Positives = 369/683 (54%), Gaps = 13/683 (1%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
F+ +L C R++ + I +L +G I + L++ KC I+ AR +FD
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGM 125
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
E V+WNS+IA Y+ +E E+ M + + +YTL S KA D SL
Sbjct: 126 SERHIVTWNSLIA-YLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFS-DLSLEKE 183
Query: 196 GKMLHVCAIKLDLN-SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
+ H A+ L L SN+ VG+AL+DMY K G +A LV + + + +I G+
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
Q+ G EA+ F M + + +++T++S++ +C + D G+ IH + K
Sbjct: 244 QK-----GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 298
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ SL+ Y +DD +R F + VSWTS+I+G V+NG+ E AL R+
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
M KP+ F +SS + C+++A G QI G K+G + I +Y K G
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
D ARL F + DV+S + MI A +GF EAL +FE M G++PN +T+L VL A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
C++ LV+EG F+ +KD + N H C+VDLLGRAGRLE+A+ + D V
Sbjct: 479 CNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLV 536
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
+WR LL AC+VH+ M + I +++E+EP + +L+ N+Y GK R +E++ M+
Sbjct: 537 LWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMK 596
Query: 615 DQGVKKEPGISWIEVGSKVHMFLVDDR-SHPMSQLIYSRLEEMLVKINKIEFGDEKLPMD 673
D +KK P +SW+E+ + H F+ D SHP S+ I LEE++ K + + ++K +
Sbjct: 597 DMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF 656
Query: 674 ISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRK 733
E + HSEKLA+ F + +R++KNLRVC DCH +K++S++ KR+
Sbjct: 657 QDMEETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 734 IILRDAIRFHHFKEGLCSCKDYW 756
II RD+ RFHHF++G CSC DYW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 157/319 (49%), Gaps = 13/319 (4%)
Query: 61 AFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYS 120
AF+ + + +++T+A VL CG+ +++ G+ IHG ++ +G + + SL+ MY
Sbjct: 254 AFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYL 313
Query: 121 KCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLA--RMHRSGLDFSDYT 178
+C ++ + +F + + VSW S+I+G V+ G RE L+ +M R + + +T
Sbjct: 314 RCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG---REEMALIEFRKMMRDSIKPNSFT 370
Query: 179 LGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESF 238
L SAL+ C + ++ G+ +H K + + G+ L+D+Y K GC A LVF++
Sbjct: 371 LSSALRGCS-NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Query: 239 RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
+ NTMI + Q G+ REAL LF M LGL + T S++ AC
Sbjct: 430 SEVDVISLNTMIYSYAQN-----GFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 299 FRAGRQIHAQICK-KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIA 357
G ++ K K + ++ C +VD G +++ D+V W ++++
Sbjct: 485 VEEGCELFDSFRKDKIMLTNDHYAC-MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543
Query: 358 GCVENGKFETALSLLRQFM 376
C + K E A + R+ +
Sbjct: 544 ACKVHRKVEMAERITRKIL 562
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L+ FR+ + + FT + L C + G IHG V G D + + LI+
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
+Y KC + AR++FDT E+D +S N++I Y + G G RE +L RM GL +D
Sbjct: 412 LYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG-REALDLFERMINLGLQPNDV 470
Query: 178 TLGSALKAC 186
T+ S L AC
Sbjct: 471 TVLSVLLAC 479
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/722 (31%), Positives = 379/722 (52%), Gaps = 19/722 (2%)
Query: 40 HLFDETPQRSIISCNSPASLLA----FREA-RIAGL------PVSDFTFAGVLAYCGSTR 88
++FD+ +R IS NS A+ A E+ RI L V+ T + +L+ G
Sbjct: 199 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 258
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ + G IHG V+ G D ++ V N+L+ MY+ R A ++F D +SWNS++A
Sbjct: 259 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 318
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+V G + LL M SG + T SAL AC G++LH + L
Sbjct: 319 SFVNDGRSL-DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK-GRILHGLVVVSGL 376
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
N ++G AL+ MY K G ++++ V + +N +I G+ + + +AL
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED-----PDKAL 431
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDF-RAGRQIHAQICKKNLQCDEFVGCSLVDF 327
F M++ G++ + T S++ AC+ GD G+ +HA I + DE V SL+
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 491
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
Y+ G + FN ++++W +M+A +G E L L+ + + G D+F
Sbjct: 492 YAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 551
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
S + A +A G+Q+ G A+K G + + N+ MY+K G+I N
Sbjct: 552 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 611
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
+ SW+ +I HG+ E F M GIKP H+T + +LTACSHGGLVD+GL Y
Sbjct: 612 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAY 671
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK 567
++++ +D+G+ ++H C++DLLGR+GRL +A+ FI + ++WR+LL +C++H
Sbjct: 672 YDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 731
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
+ G+ A+ + +LEP + YVL N++ G+ + VRK M + +KK+ SW+
Sbjct: 732 NLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 791
Query: 628 EVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSH 687
++ KV F + DR+HP + IY++LE++ I + + + E + +
Sbjct: 792 KLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWN 851
Query: 688 HSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKE 747
HSE+LA+ + ++S P+ + VR+ KNLR+CSDCH K +S++ R+I+LRD RFHHF+
Sbjct: 852 HSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFER 911
Query: 748 GL 749
GL
Sbjct: 912 GL 913
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 236/481 (49%), Gaps = 29/481 (6%)
Query: 41 LFDETPQRSIISCNS----------PASLL-AFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F+E P R+++S S P ++ ++ R G+ ++ + + V++ CG ++
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 158
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
LG I G V+ +G++ + V NSLI+M ++ A +FD E D +SWNSI A
Sbjct: 159 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 218
Query: 150 YVRLG---DGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
Y + G + FR +F L+ R H D + T S L + G+ +H +K+
Sbjct: 219 YAQNGHIEESFR-IFSLMRRFH----DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 273
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
+S + V LL MYA G +A LVF+ + +N+++A F V+ G + +
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF-----VNDGRSLD 328
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
ALGL C M G + + TF+S + AC F GR +H + L ++ +G +LV
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y G + + R P+ DVV+W ++I G E+ + AL+ + G +
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 387 MSSVMGVC---ADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+ SV+ C D+ G+ + + + G + V+NS I MYAK GD+ S++ F
Sbjct: 449 VVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN 506
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
++N ++++W+ M+ NAHHG E L++ M G+ + + L+A + +++E
Sbjct: 507 GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 566
Query: 504 G 504
G
Sbjct: 567 G 567
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 209/444 (47%), Gaps = 36/444 (8%)
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
++VSWN++++G VR+G + E E +M G+ S + + S + AC S+ G
Sbjct: 5 NEVSWNTMMSGIVRVGL-YLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
+H K L S++ V TA+L +Y G ++ + VFE N + +++ G+ +
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK-- 121
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
G E + ++ M+ G+ C++ + S ++ +C + D GRQI Q+ K L+
Sbjct: 122 ---GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA---LSLLRQF 375
V SL+ G++D F+ + D +SW S+ A +NG E + SL+R+F
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
+ + +S+++ V + + G I G +K G + + V N+ + MYA +G
Sbjct: 239 H---DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
A L F+++ D++SW+ ++ + G + +AL + M SG N++T L AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 496 S-----------HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI 544
HG +V GL Y +I+ +V + G+ G + +++R +
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQII------------GNALVSMYGKIGEMSESRRVL 403
Query: 545 LDSGFADDPVMWRALLGACRVHKD 568
L D V W AL+G +D
Sbjct: 404 LQMP-RRDVVAWNALIGGYAEDED 426
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 238/510 (46%), Gaps = 17/510 (3%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNL-RLGEAIHGSVLVTGMDGMIFVMNSLINMYS 120
FR+ G+ S F A ++ CG + ++ R G +HG V +G+ ++V +++++Y
Sbjct: 29 FRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG 88
Query: 121 KCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLG 180
+ +R +F+ + + VSW S++ GY G+ EV ++ M G+ ++ ++
Sbjct: 89 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP-EEVIDIYKGMRGEGVGCNENSMS 147
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
+ +C + K +G+ + +K L S + V +L+ M G + A +F+
Sbjct: 148 LVISSCGLLKD-ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
+ +N++ A + Q G+ E+ +F M+ + T S+++ + +
Sbjct: 207 RDTISWNSIAAAYAQN-----GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 261
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
GR IH + K V +L+ Y+ G + F P D++SW S++A V
Sbjct: 262 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 321
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
+G+ AL LL ++SG+ + +S + C G + G + G+ I
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG 480
+ N+ + MY K G++ +R ++ DVV+W+ +I A ++AL F+ M V G
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 481 IKPNHITLLGVLTAC-SHGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAGRLE 538
+ N+IT++ VL+AC G L++ G + I+ + +VK+S ++ + + G L
Sbjct: 442 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS--LITMYAKCGDLS 499
Query: 539 DAKRFI--LDSGFADDPVMWRALLGACRVH 566
++ LD+ + + W A+L A H
Sbjct: 500 SSQDLFNGLDN---RNIITWNAMLAANAHH 526
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAA-RSG 403
P + VSW +M++G V G + + R+ G KP F+++S++ C + R G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHH 463
Q+ G+ K G+ + + V + + +Y G + +R F+E+ + +VVSW+ ++ +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL-RYFEIMKKDYGITANVK 522
G E + I++ M G+ N ++ V+++C G L DE L R G+ + +
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSC--GLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 523 HSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
++ +LG G + D +I D D + W ++ A
Sbjct: 180 VENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSIAAA 218
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/708 (33%), Positives = 367/708 (51%), Gaps = 36/708 (5%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA---ARVLFDTCD 136
+L C + ++LR+ IH ++ G+ + ++ LI E A +F T
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E + + WN++ G+ D +L M GL + YT LK+C K+ G
Sbjct: 96 EPNLLIWNTMFRGHALSSDPV-SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK-EG 153
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ +H +KL + ++ V T+L+ MY + G L DA VF+ + + Y +I G+ R
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 257 QTVS---------------------CGYA-----REALGLFCEMQMLGLNCSKFTFSSIV 290
+ GYA +EAL LF +M + + T ++V
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 291 KACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVV 350
AC G GRQ+H I + + +L+D YS G ++ F P DV+
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 351 SWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWA 410
SW ++I G ++ AL L ++ + SG P++ M S++ CA + A G I +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 411 LKF--GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE 468
K G++N ++ S I MYAK GDI++A F I + + SW+ MI A HG A+
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
+ +F M GI+P+ IT +G+L+ACSH G++D G F M +DY +T ++H C++
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 529 DLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
DLLG +G ++A+ I D V+W +LL AC++H + +G+ A+ +I++EP
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQL 648
SYVLL NIY AG+ + R L+ D+G+KK PG S IE+ S VH F++ D+ HP ++
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 649 IYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVR 708
IY LEEM V + K F + + E + HHSEKLA+ FG+IS +
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 709 VIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
++KNLRVC +CH KLISK+ KR+II RD RFHHF++G+CSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 191/422 (45%), Gaps = 42/422 (9%)
Query: 19 PFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIA-GLPVSDFTF 77
P LP++ V I+ L +++ + +S + P S L I+ GL + +TF
Sbjct: 79 PHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSD-PVSALKLYVCMISLGLLPNSYTF 137
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC-- 135
VL C ++ + G+ IHG VL G D ++V SLI+MY + R+E A +FD
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 136 --------------------------DEL---DDVSWNSIIAGYVRLGDGFREVFELLAR 166
DE+ D VSWN++I+GY G+ ++E EL
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN-YKEALELFKD 256
Query: 167 MHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
M ++ + + T+ + + AC S+ +G+ +H+ SN+ + AL+D+Y+K G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIE-LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 227 CLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTF 286
L A +FE Y + +NT+I G+ +EAL LF EM G + T
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLY-----KEALLLFQEMLRSGETPNDVTM 370
Query: 287 SSIVKACVAIGDFRAGRQIHAQICK--KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST 344
SI+ AC +G GR IH I K K + + SL+D Y+ G I+ + FNS
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
+ SW +MI G +G+ + + L + G +PD+ ++ C+ G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 405 QI 406
I
Sbjct: 491 HI 492
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 27/367 (7%)
Query: 41 LFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFDE P + ++S N+ S A F++ + + T V++ C + +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ LG +H + G + ++N+LI++YSKC +E A LF+ D +SWN++I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL--D 207
Y + + ++E L M RSG +D T+ S L AC +++ IG+ +HV K
Sbjct: 342 YTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID-IGRWIHVYIDKRLKG 399
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
+ + + T+L+DMYAK G + A VF S + + +N MI GF G A +
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH-----GRADAS 454
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICK--KNLQCDEFVGC--S 323
LF M+ +G+ TF ++ AC G GR I + + K E GC
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA-SGRKP 382
L+ F ++ I P D V W S++ C +G E S + P
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEP--DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 572
Query: 383 DEFIMSS 389
+++ S
Sbjct: 573 GSYVLLS 579
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 244/702 (34%), Positives = 365/702 (51%), Gaps = 77/702 (10%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVR---LGDGFREVFELLARMHR 169
N +I+ Y + E AR LFD E D VSWN +I GYVR LG RE+FE++ R
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA-RELFEIMP--ER 155
Query: 170 SGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLT 229
++ G A C VD + + +M N V ALL Y + +
Sbjct: 156 DVCSWNTMLSGYAQNGC-VDDARSVFDRMPE---------KNDVSWNALLSAYVQNSKME 205
Query: 230 DAVLVFESFRYHNDFMYNTMIAGFLQRQ---------------------TVSCGYAR--- 265
+A ++F+S +N ++ GF++++ T+ GYA+
Sbjct: 206 EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 266 --EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN---------- 313
EA LF E + + FT++++V + R++ ++ ++N
Sbjct: 266 IDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321
Query: 314 -LQCD---------EFVGC-------SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
+Q + + + C +++ Y+ G I + F+ PK D VSW +MI
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
AG ++G AL L Q G + + SS + CAD+ A G+Q+ G +K G
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
V N+ + MY K G I+ A F+E+ D+VSW+ MI + HGF ALR FE M
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESM 501
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
G+KP+ T++ VL+ACSH GLVD+G +YF M +DYG+ N +H C+VDLLGRAG
Sbjct: 502 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGL 561
Query: 537 LEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNI 596
LEDA + + F D +W LLGA RVH +T + + AD++ +EP + YVLL N+
Sbjct: 562 LEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 621
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
Y +G+ ++R M+D+GVKK PG SWIE+ +K H F V D HP I++ LEE+
Sbjct: 622 YASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Query: 657 LVKINKIEFGDEK--LPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLR 714
+++ K + + + D+ E +V +HSE+LAV +GI+ + P+RVIKNLR
Sbjct: 682 DLRMKKAGYVSKTSVVLHDVEEEEKERMV--RYHSERLAVAYGIMRVSSGRPIRVIKNLR 739
Query: 715 VCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
VC DCH +K ++++ R IILRD RFHHFK+G CSC DYW
Sbjct: 740 VCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 176/413 (42%), Gaps = 48/413 (11%)
Query: 106 DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLA 165
D I N I+ Y + R A +F VS+N +I+GY+R G+ FEL
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE-----FELAR 115
Query: 166 RMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKT 225
++ + + +K +++L ++ + + ++ +L YA+
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-----DVCSWNTMLSGYAQN 170
Query: 226 GCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFT 285
GC+ DA VF+ ND +N +++ ++Q + EA LF S+
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKME-----EACMLF---------KSREN 216
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC-SLVDFYSFFGSIDDGIRCFNST 344
++ + C+ G + + + A+ ++ + V +++ Y+ G ID+ + F+ +
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
P DV +WT+M++G ++N E A L D+ + + A +A GE
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELF----------DKMPERNEVSWNAMLAGYVQGE 326
Query: 405 QIQGWALKFGI--SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAH 462
+++ F + + N+ I YA+ G I A+ F ++ D VSW+ MI +
Sbjct: 327 RMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 386
Query: 463 HGFANEALRIFELMTVSGIKPNHITLLGVLTACS-----------HGGLVDEG 504
G + EALR+F M G + N + L+ C+ HG LV G
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 104/264 (39%), Gaps = 38/264 (14%)
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL-----RQFMASGRKP 382
Y G ++ +R F P+ VS+ MI+G + NG+FE A L R ++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
++ + +G ++ + W N+ + YA++G +D AR F
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSW-------------NTMLSGYAQNGCVDDARSVF 180
Query: 443 QEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD 502
+ + VSW+ ++ + EA +F+ + V C GG V
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL---------VSWNCLLGGFVK 231
Query: 503 -----EGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWR 557
E ++F+ M +V I+ ++G++++A++ + D D W
Sbjct: 232 KKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQ-LFDESPVQDVFTWT 285
Query: 558 ALLGACRVHKDTMMGKHIADRVIE 581
A++ ++ + + D++ E
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPE 309
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/599 (37%), Positives = 340/599 (56%), Gaps = 13/599 (2%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
F + + +G + DFTF +L+ C ++ +L +G H ++ + +FV N+L++MY+K
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
C +E AR +F+ + D+V+WN+II YV+ + E F+L RM+ G+ L S
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSYVQ-DENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
LKAC L GK +H ++K L+ ++ G++L+DMY+K G + DA VF S
Sbjct: 535 TLKACTHVHGLY-QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
+ N +IAG+ Q EA+ LF EM G+N S+ TF++IV+AC
Sbjct: 594 SVVSMNALIAGYSQNNL------EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 302 GRQIHAQICKKNLQCD-EFVGCSLVDFYSFFGSIDDGIRCFN--STPKLDVVSWTSMIAG 358
G Q H QI K+ + E++G SL+ Y + + F+ S+PK +V WT M++G
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK-SIVLWTGMMSG 706
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
+NG +E AL ++ G PD+ +V+ VC+ +++ R G I
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIEN-PDVVSWSEMICCNAHHGFANEALRIFELMT 477
+ N+ I MYAK GD+ + F E+ +VVSW+ +I A +G+A +AL+IF+ M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
S I P+ IT LGVLTACSH G V +G + FE+M YGI A V H C+VDLLGR G L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 538 EDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIY 597
++A FI D +W +LLGACR+H D + G+ A+++IELEP +++YVLL NIY
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIY 946
Query: 598 NDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
G ++A +RK+M+D+GVKK PG SWI+V + H+F D+SH I LE++
Sbjct: 947 ASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 266/562 (47%), Gaps = 42/562 (7%)
Query: 24 LPFSNPVHSPIRTRTLH----LFDETPQRSIISCN-----------SPASLLAFREARIA 68
L F +++ IR L LF E +++ N ++ F R +
Sbjct: 262 LAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS 321
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
+ + T VL+ G NL LG +H + G+ I+V +SL++MYSKC+++EAA
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 129 RVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCV 188
+F+ +E +DV WN++I GY G+ + V EL M SG + D+T S L C
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHK-VMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
L +G H IK L N+ VG AL+DMYAK G L DA +FE ++ +NT
Sbjct: 441 SHDLE-MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
+I ++Q + S EA LF M + G+ +S +KAC + G+Q+H
Sbjct: 500 IIGSYVQDENES-----EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 309 ICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA 368
K L D G SL+D YS G I D + F+S P+ VVS ++IAG +N E A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEA 613
Query: 369 LSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISN---FIIVQNSQ 425
+ L ++ + G P E ++++ C + G Q G K G S+ ++ + S
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SL 671
Query: 426 ICMYAKSGDIDSARLTFQEIENP-DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPN 484
+ MY S + A F E+ +P +V W+ M+ ++ +GF EAL+ ++ M G+ P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKH------STCIVDLLGRAGRLE 538
T + VL CS + EG + + + ++ H S ++D+ + G ++
Sbjct: 732 QATFVTVLRVCSVLSSLREG-------RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 539 DAKRFILDSGFADDPVMWRALL 560
+ + + + V W +L+
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLI 806
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 200/390 (51%), Gaps = 10/390 (2%)
Query: 106 DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLA 165
D + FV ++IN Y + +++ AR+LF D V+WN +I+G+ + G + E
Sbjct: 260 DHLAFV--TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI-EYFF 316
Query: 166 RMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKT 225
M +S + + TLGS L A + +L+ +G ++H AIKL L SN+ VG++L+ MY+K
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLD-LGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 226 GCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFT 285
+ A VFE+ ND +N MI G+ G + + + LF +M+ G N FT
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHN-----GESHKVMELFMDMKSSGYNIDDFT 430
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
F+S++ C A D G Q H+ I KK L + FVG +LVD Y+ G+++D + F
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
D V+W ++I V++ A L ++ G D ++S + C + G+Q
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGF 465
+ ++K G+ + +S I MY+K G I AR F + VVS + +I + +
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL 610
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTAC 495
EA+ +F+ M G+ P+ IT ++ AC
Sbjct: 611 -EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 240/553 (43%), Gaps = 58/553 (10%)
Query: 10 PNPFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAG 69
P+ + F F+ L +S + I L D+ QR + C L F+ ++
Sbjct: 9 PSSAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKL--FKSRKVFD 66
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
A LR+G+A+H L+ G+D + N+++++Y+KC ++ A
Sbjct: 67 EMPQRLALA-----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE 115
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
FD E D +WNS+++ Y +G + V + + + + +T L C +
Sbjct: 116 KQFDFL-EKDVTAWNSMLSMYSSIGKPGK-VLRSFVSLFENQIFPNKFTFSIVLSTCARE 173
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
++ G+ +H IK+ L N G AL+DMYAK ++DA VFE N + +
Sbjct: 174 TNVE-FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCL 232
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
+G+ V G EA+ +F M+ G F +++ + +G + R +
Sbjct: 233 FSGY-----VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL---- 283
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETAL 369
FG + S+P DVV+W MI+G + G A+
Sbjct: 284 ---------------------FGEM--------SSP--DVVAWNVMISGHGKRGCETVAI 312
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY 429
S K + SV+ +A G + A+K G+++ I V +S + MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 430 AKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
+K +++A F+ +E + V W+ MI AH+G +++ + +F M SG + T
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 490 GVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGF 549
+L+ C+ ++ G ++ I+ K + N+ +VD+ + G LEDA++ I +
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQ-IFERMC 490
Query: 550 ADDPVMWRALLGA 562
D V W ++G+
Sbjct: 491 DRDNVTWNTIIGS 503
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 26/340 (7%)
Query: 41 LFDETPQRSIISCNS----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNL 90
+F P+ S++S N+ +++ F+E G+ S+ TFA ++ C +L
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 91 RLGEAIHGSVLVTGMDGM-IFVMNSLINMYSKCKRIEAARVLFDTCDELDD-VSWNSIIA 148
LG HG + G ++ SL+ MY + + A LF V W +++
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G+ + G + E + M G+ T + L+ C V SL G+ +H L
Sbjct: 706 GHSQNG-FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR-EGRAIHSLIFHLAH 763
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM-YNTMIAGFLQRQTVSCGYAREA 267
+ + + L+DMYAK G + + VF+ R ++ + +N++I G+ + GYA +A
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN-----GYAEDA 818
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI-HAQICKKNLQCD-EFVGC--S 323
L +F M+ + + TF ++ AC G GR+I I + ++ + V C
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 878
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
L+ + + DD I N P D W+S++ C +G
Sbjct: 879 LLGRWGYLQEADDFIEAQNLKP--DARLWSSLLGACRIHG 916
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/683 (33%), Positives = 355/683 (51%), Gaps = 53/683 (7%)
Query: 115 LINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF 174
+I++Y+ K + A +LF T ++W S+I + F + M SG
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD-QSLFSKALASFVEMRASGRCP 103
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK---------T 225
S LK+C + L G+ +H ++L ++ ++ G AL++MYAK
Sbjct: 104 DHNVFPSVLKSCTMMMDLR-FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 226 GCLTDAV---------------------------LVFESFRYHNDFMYNTMIAGFLQRQT 258
G + D + VFE + YNT+IAG+ Q
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ--- 219
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
G +AL + EM L FT SS++ D G++IH + +K + D
Sbjct: 220 --SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDV 277
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS 378
++G SLVD Y+ I+D R F+ D +SW S++AG V+NG++ AL L RQ + +
Sbjct: 278 YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA 337
Query: 379 GRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSA 438
KP SSV+ CA +A G+Q+ G+ L+ G + I + ++ + MY+K G+I +A
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397
Query: 439 RLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHG 498
R F + D VSW+ +I +A HG +EA+ +FE M G+KPN + + VLTACSH
Sbjct: 398 RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Query: 499 GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRA 558
GLVDE YF M K YG+ ++H + DLLGRAG+LE+A FI +W
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWST 517
Query: 559 LLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGV 618
LL +C VHK+ + + +A+++ ++ +YVL+ N+Y G+ K ++R M+ +G+
Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Query: 619 KKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGT- 677
+K+P SWIE+ +K H F+ DRSHP I L+ ++ ++ K E D SG
Sbjct: 578 RKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK-----EGYVADTSGVL 632
Query: 678 ----ELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRK 733
E + + HSE+LAV FGII+ +RV KN+R+C+DCHV +K ISK+ +R+
Sbjct: 633 HDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITERE 692
Query: 734 IILRDAIRFHHFKEGLCSCKDYW 756
II+RD RFHHF G CSC DYW
Sbjct: 693 IIVRDNSRFHHFNRGNCSCGDYW 715
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 210/466 (45%), Gaps = 65/466 (13%)
Query: 48 RSIISCNSPASLLA-----FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLV 102
+S+I C + SL + F E R +G F VL C +LR GE++HG ++
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 103 TGMDGMIFVMNSLINMYSKC-----------------KR-------------------IE 126
GMD ++ N+L+NMY+K +R I+
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 127 AARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
+ R +F+ D VS+N+IIAGY + G + + ++ M + L +TL S L
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSG-MYEDALRMVREMGTTDLKPDSFTLSSVLP-- 250
Query: 187 CVDKSLNCI-GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
+ ++ I GK +H I+ ++S++ +G++L+DMYAK+ + D+ VF +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+N+++AG++Q G EAL LF +M + FSS++ AC + G+Q+
Sbjct: 311 WNSLVAGYVQN-----GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
H + + + F+ +LVD YS G+I + F+ LD VSWT++I G +G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
A+SL + G KP++ +V+ C+ + G + W F + N +
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV-----GLVDEAWGY-FNSMTKVYGLNQE 479
Query: 426 ICMYAKSGDIDSARLTFQEIEN--------PDVVSWSEMI-CCNAH 462
+ YA D+ +E N P WS ++ C+ H
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 18/268 (6%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F+ P++ ++S N+ +L RE L FT + VL +
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ G+ IHG V+ G+D +++ +SL++MY+K RIE + +F D +SWNS++AG
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
YV+ G + E L +M + + S + AC +L+ +GK LH ++
Sbjct: 318 YVQNGR-YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH-LGKQLHGYVLRGGFG 375
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
SN+ + +AL+DMY+K G + A +F+ ++ + +I G G+ EA+
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH-----GHGHEAVS 430
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIG 297
LF EM+ G+ ++ F +++ AC +G
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVG 458
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/704 (32%), Positives = 362/704 (51%), Gaps = 65/704 (9%)
Query: 41 LFDETPQRSIIS--------CNSPASLLAFR---EARIAGLPVSDFTFAGVLAYCGSTRN 89
LF P ++ IS C S + + AF E + G+ +++T VL C S
Sbjct: 81 LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVL 140
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD-ELDDVSWNSIIA 148
L GE IHG + TG D + V+N L+ MY++CKRI A LF+T + E ++V+W S++
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
GY + G F+ + E + R G + YT S L AC + +G +H C +K
Sbjct: 201 GYSQNGFAFKAI-ECFRDLRREGNQSNQYTFPSVLTACASVSACR-VGVQVHCCIVKSGF 258
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+N+ V +AL+DMYAK + A + E + +N+MI G +++ G EAL
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQ-----GLIGEAL 313
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIG--DFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
+F M + FT SI+ C A+ + + H I K + V +LVD
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVD 372
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y+ G +D ++ F + DV+SWT+++ G NG ++ AL L G PD+ +
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
+SV+ A++ G+Q+ G +K G + + V NS + MY K G ++ A + F +E
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
D+++W+ +I G+A GL+++ R
Sbjct: 493 IRDLITWTCLIV-----GYAK------------------------------NGLLEDAQR 517
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
YF+ M+ YGIT +H C++DL GR+G ++ + D +W+A+L A R H
Sbjct: 518 YFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKH 577
Query: 567 KDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
+ G+ A ++ELEP+ A YV L N+Y+ AG++ A VR+LM+ + + KEPG SW
Sbjct: 578 GNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSW 637
Query: 627 IEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKI-EFGDEKLP---MDISGTELNGI 682
+E KVH F+ +DR HP IYS+++EM++ I + F D +D G EL
Sbjct: 638 VEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKEL--- 694
Query: 683 VGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLI 726
G+++HSEKLAV FG++ +P AP+R+IKNLRVC DCH MKL+
Sbjct: 695 -GLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 37/398 (9%)
Query: 192 LNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIA 251
L G +H A + L+SN+++G +K+G + +A +F+ ++F +NTMI
Sbjct: 13 LKPFGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIV 67
Query: 252 GFLQRQTVS---------------------CGYAR-----EALGLFCEMQMLGLNCSKFT 285
+ + +S GY + EA LF EMQ G+ +++T
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
S+++ C ++ G QIH K D V L+ Y+ I + F +
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 346 -KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
+ + V+WTSM+ G +NG A+ R G + +++ SV+ CA ++A R G
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 405 QIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHG 464
Q+ +K G I VQ++ I MYAK +++SAR + +E DVVSW+ MI G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLT--ACSHGGLVDEGLRYFEIMKKDYGITANVK 522
EAL +F M +K + T+ +L A S + + I+K Y V
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN 367
Query: 523 HSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
++ +VD+ + G ++ A + + + D + W AL+
Sbjct: 368 NA--LVDMYAKRGIMDSALK-VFEGMIEKDVISWTALV 402
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 5/271 (1%)
Query: 296 IGDF-RAGRQIHA-QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
+GD ++GR A Q+ K + DEF +++ YS + D + F S P + +SW
Sbjct: 35 LGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWN 94
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
++I+G ++G A +L + + G KP+E+ + SV+ +C + GEQI G +K
Sbjct: 95 ALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT 154
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICCNAHHGFANEALRI 472
G + V N + MYA+ I A F+ +E + V+W+ M+ + +GFA +A+
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
F + G + N T VLTAC+ G++ + K G N+ + ++D+
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYA 273
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
+ +E A R +L+ DD V W +++ C
Sbjct: 274 KCREMESA-RALLEGMEVDDVVSWNSMIVGC 303
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 316/564 (56%), Gaps = 11/564 (1%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K +H ++ + + T LL+ G + A VF+ F++NT+ G+++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
Q E+L L+ +M+ LG+ +FT+ +VKA +GDF G +HA + K C
Sbjct: 88 QL-----PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
V LV Y FG + F S D+V+W + +A CV+ G AL +
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
A + D F + S++ C + + GE+I A K I IIV+N+++ M+ K G+ +
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
+AR+ F+E++ +VVSWS MI A +G + EAL +F M G++PN++T LGVL+ACS
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 497 HGGLVDEGLRYFEIM--KKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
H GLV+EG RYF +M D + +H C+VDLLGR+G LE+A FI D
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
+W ALLGAC VH+D ++G+ +AD ++E P + +VLL NIY AGK +VR M+
Sbjct: 383 IWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMR 442
Query: 615 DQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPM-- 672
G KK S +E K+H F D+SHP S+ IY +L+E+L KI K+ + + +
Sbjct: 443 KLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFH 502
Query: 673 DISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKR 732
D+ E +SHHSEKLA+ FG+I P+RV+KNLR C DCH K +S L
Sbjct: 503 DVEMEEKE--CSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTST 560
Query: 733 KIILRDAIRFHHFKEGLCSCKDYW 756
+II+RD RFHHF+ G+CSCK++W
Sbjct: 561 EIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 11/306 (3%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
SLL +++ R G+ +FT+ V+ + G A+H V+ G + V L+
Sbjct: 93 SLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVM 152
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
MY K + +A LF++ D V+WN+ +A V+ G+ E +M + F +
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS-AIALEYFNKMCADAVQFDSF 211
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
T+ S L AC SL IG+ ++ A K +++ N++V A LDM+ K G A ++FE
Sbjct: 212 TVVSMLSACGQLGSLE-IGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 238 FRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIG 297
+ N ++TMI G+ G +REAL LF MQ GL + TF ++ AC G
Sbjct: 271 MKQRNVVSWSTMIVGYAMN-----GDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 298 DFRAGRQ---IHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWT 353
G++ + Q KNL+ + +VD G +++ P + D W
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 354 SMIAGC 359
+++ C
Sbjct: 386 ALLGAC 391
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 170/416 (40%), Gaps = 13/416 (3%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ IH VL TG ++ L+ + AR +FD + WN++ GYVR
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
F + L +M G+ ++T +KA +C G LH +K +
Sbjct: 88 QLPFESLL-LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC-GFALHAHVVKYGFGCLGI 145
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
V T L+ MY K G L+ A +FES + + +N +A V G + AL F +
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA-----VCVQTGNSAIALEYFNK 200
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M + FT S++ AC +G G +I+ + K+ + C+ V + +D + G+
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
+ F + +VVSW++MI G NG AL+L G +P+ V+
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 394 CADMAAARSGEQIQGWALKFGISNFIIVQNSQICM---YAKSGDIDSARLTFQEIE-NPD 449
C+ G++ ++ N + CM +SG ++ A +++ PD
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 450 VVSWSEMICCNAHHGFANEALRIFELM--TVSGIKPNHITLLGVLTACSHGGLVDE 503
W ++ A H ++ +++ T I H+ L + A VD+
Sbjct: 381 TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 54 NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMN 113
NS +L F + + FT +L+ CG +L +GE I+ +D I V N
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 114 SLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLD 173
+ ++M+ KC EAARVLF+ + + VSW+++I GY GD RE L M GL
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS-REALTLFTTMQNEGLR 308
Query: 174 FSDYTLGSALKAC 186
+ T L AC
Sbjct: 309 PNYVTFLGVLSAC 321
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/649 (33%), Positives = 357/649 (55%), Gaps = 40/649 (6%)
Query: 37 RTLHLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCG 85
+L +F P+++ +S ++ +L F+E + VS +A VL C
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
+ LRLG +H L + V + ++MY+KC ++ A++LFD + L+ S+N+
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 146 IIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
+I GY + GF+ + L R+ SGL F + +L +AC + K L+ G ++ AIK
Sbjct: 353 MITGYSQEEHGFKALL-LFHRLMSSGLGFDEISLSGVFRACALVKGLS-EGLQIYGLAIK 410
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
L+ ++ V A +DMY K L +A VF+ R + +N +IA Q G
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN-----GKGY 465
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
E L LF M + +FTF SI+KAC G G +IH+ I K + + VGCSL+
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 326 DFYS--------------FF------GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
D YS FF G++++ + N + VSW S+I+G V +
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
E A L + M G PD+F ++V+ CA++A+A G+QI +K + + + + ++
Sbjct: 585 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTL 644
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+ MY+K GD+ +RL F++ D V+W+ MIC AHHG EA+++FE M + IKPNH
Sbjct: 645 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
+T + +L AC+H GL+D+GL YF +MK+DYG+ + H + +VD+LG++G+++ A I
Sbjct: 705 VTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 764
Query: 546 DSGFADDPVMWRALLGACRVHKDTM-MGKHIADRVIELEPHAAASYVLLYNIYNDAGKEK 604
+ F D V+WR LLG C +H++ + + + ++ L+P +++Y LL N+Y DAG +
Sbjct: 765 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 605 RALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRL 653
+ ++R+ M+ +KKEPG SW+E+ ++H+FLV D++HP + IY L
Sbjct: 825 KVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 243/504 (48%), Gaps = 44/504 (8%)
Query: 72 VSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVL 131
VS F+ V C L LG+ H ++++G FV+N L+ +Y+ + +A ++
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 132 FD--------TCDEL-----------------------DDVSWNSIIAGYVRLGDGFREV 160
FD + +++ D VSWNS+++GY++ G+ + +
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 161 FELLARMHRSGLDFSDYTLGSALKACCV--DKSLNCIGKMLHVCAIKLDLNSNMVVGTAL 218
E+ M R G++F T LK C D SL G +H +++ ++++V +AL
Sbjct: 166 -EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSL---GMQIHGIVVRVGCDTDVVAASAL 221
Query: 219 LDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
LDMYAK +++ VF+ N ++ +IAG +Q +S AL F EMQ +
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL-----ALKFFKEMQKVN 276
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
S+ ++S++++C A+ + R G Q+HA K + D V + +D Y+ ++ D
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
F+++ L+ S+ +MI G + AL L + M+SG DE +S V CA +
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
G QI G A+K +S + V N+ I MY K + A F E+ D VSW+ +I
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIA 456
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGIT 518
+ +G E L +F M S I+P+ T +L AC+ GG + G+ + K G+
Sbjct: 457 AHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMA 514
Query: 519 ANVKHSTCIVDLLGRAGRLEDAKR 542
+N ++D+ + G +E+A++
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEK 538
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 253/555 (45%), Gaps = 49/555 (8%)
Query: 41 LFDETPQRSIISCNSP-----------ASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
F+ P R ++S NS S+ F + G+ TFA +L C +
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 195
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR-IEAARVLFDTCDELDDVSWNSIIA 148
LG IHG V+ G D + ++L++MY+K KR +E+ RV F E + VSW++IIA
Sbjct: 196 TSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV-FQGIPEKNSVSWSAIIA 254
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G V+ + + M + S S L++C L +G LH A+K D
Sbjct: 255 GCVQ-NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR-LGGQLHAHALKSDF 312
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
++ +V TA LDMYAK + DA ++F++ N YN MI G+ Q + + +AL
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE-----HGFKAL 367
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
LF + GL + + S + +AC + G QI+ K +L D V + +D Y
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
++ + R F+ + D VSW ++IA +NGK L L + S +PDEF
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL-------- 440
S++ C + G +I +K G+++ V S I MY+K G I+ A
Sbjct: 488 SILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 441 -----TFQEIENPD-------VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
T +E+E VSW+ +I + +A +F M GI P+ T
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 489 LGVLTACSHGGLVDEGLR---YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
VL C++ L GL + +++KK+ + ++V + +VD+ + G L D+ R +
Sbjct: 607 ATVLDTCAN--LASAGLGKQIHAQVIKKE--LQSDVYICSTLVDMYSKCGDLHDS-RLMF 661
Query: 546 DSGFADDPVMWRALL 560
+ D V W A++
Sbjct: 662 EKSLRRDFVTWNAMI 676
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 174/354 (49%), Gaps = 11/354 (3%)
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
++V +++ Y+K+ + A F + +N+M++G+LQ G + +++ +
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQN-----GESLKSIEV 167
Query: 271 FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
F +M G+ TF+ I+K C + D G QIH + + D +L+D Y+
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
+ +R F P+ + VSW+++IAGCV+N AL ++ + I +SV
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
+ CA ++ R G Q+ ALK + IV+ + + MYAK ++ A++ F EN +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 451 VSWSEMIC--CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
S++ MI HGF +AL +F + SG+ + I+L GV AC+ + EGL+ +
Sbjct: 348 QSYNAMITGYSQEEHGF--KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
+ K ++ +V + +D+ G+ L +A R + D D V W A++ A
Sbjct: 406 GLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFR-VFDEMRRRDAVSWNAIIAA 457
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/665 (33%), Positives = 352/665 (52%), Gaps = 11/665 (1%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ IH S++ + F++N L+ ++ + + +LF + +NS+I G+V
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN- 88
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
F E +L + + GL +T LKAC S +G LH +K N ++
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRK-LGIDLHSLVVKCGFNHDVA 147
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
T+LL +Y+ +G L DA +F+ + + + +G+ + G REA+ LF +
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY-----TTSGRHREAIDLFKK 202
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M +G+ + ++ ACV +GD +G I + + +Q + FV +LV+ Y+ G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
++ F+S + D+V+W++MI G N + + L Q + KPD+F + +
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 394 CADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSW 453
CA + A GE + + + N+ I MYAK G + F+E++ D+V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 454 SEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK 513
+ I A +G + +F GI P+ T LG+L C H GL+ +GLR+F +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 514 DYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGK 573
Y + V+H C+VDL GRAG L+DA R I D + ++W ALL CR+ KDT + +
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 574 HIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKV 633
+ +I LEP A +YV L NIY+ G+ A EVR +M +G+KK PG SWIE+ KV
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 634 HMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF--GDEKLPMDISGTELNGIVGMSHHSEK 691
H FL DD+SHP+S IY++LE++ ++ + F E + D+ E ++G +HSEK
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLG--YHSEK 620
Query: 692 LAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCS 751
LAV G+IS +RV+KNLRVC DCH MKLISK+ +R+I++RD RFH F G CS
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 752 CKDYW 756
C DYW
Sbjct: 681 CNDYW 685
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 185/424 (43%), Gaps = 30/424 (7%)
Query: 40 HLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGS 99
HLF ET L F R GL + FTF VL C + +LG +H
Sbjct: 90 HLFHET-------------LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 100 VLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFRE 159
V+ G + + M SL+++YS R+ A LFD + V+W ++ +GY G RE
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR-HRE 195
Query: 160 VFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALL 219
+L +M G+ Y + L AC L+ G+ + ++++ N V T L+
Sbjct: 196 AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDS-GEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 220 DMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGL 279
++YAK G + A VF+S + ++TMI G+ S + +E + LF +M L
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY-----ASNSFPKEGIELFLQMLQENL 309
Query: 280 NCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIR 339
+F+ + +C ++G G + I + + F+ +L+D Y+ G++ G
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 340 CFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAA 399
F + D+V + I+G +NG + + ++ Q G PD ++ C
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 400 ARSGEQIQG-----WALKFGISNFIIVQNSQICMYAKSGDIDSA-RLTFQEIENPDVVSW 453
+ G + +ALK + ++ + ++ ++G +D A RL P+ + W
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 454 SEMI 457
++
Sbjct: 486 GALL 489
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 326/579 (56%), Gaps = 15/579 (2%)
Query: 186 CCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
CC +S +H + + + + T L+ MY+ G + A VF+ R ++
Sbjct: 86 CCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV 145
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA----IGDFRA 301
+N + R G+ E LGL+ +M +G+ +FT++ ++KACVA +
Sbjct: 146 WNALF-----RALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMK 200
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVE 361
G++IHA + ++ ++ +LVD Y+ FG +D F P +VVSW++MIA +
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 362 NGKFETALSLLRQFMASGR--KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFI 419
NGK AL R+ M + P+ M SV+ CA +AA G+ I G+ L+ G+ + +
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 420 IVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVS 479
V ++ + MY + G ++ + F + + DVVSW+ +I HG+ +A++IFE M +
Sbjct: 321 PVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
G P +T + VL ACSH GLV+EG R FE M +D+GI ++H C+VDLLGRA RL++
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYND 599
A + + D P +W +LLG+CR+H + + + + R+ LEP A +YVLL +IY +
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAE 500
Query: 600 AGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVK 659
A V+KL++ +G++K PG W+EV K++ F+ D +P+ + I++ L ++
Sbjct: 501 AQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAED 560
Query: 660 INKIEF--GDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCS 717
+ + + + + ++ E IV HSEKLA+ FG+I+ K P+R+ KNLR+C
Sbjct: 561 MKEKGYIPQTKGVLYELETEEKERIV--LGHSEKLALAFGLINTSKGEPIRITKNLRLCE 618
Query: 718 DCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
DCH+ K ISK +++I++RD RFH FK G+CSC DYW
Sbjct: 619 DCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 181/406 (44%), Gaps = 13/406 (3%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLF 132
S T+ ++ CG +L +H +L G D F+ LI MYS ++ AR +F
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135
Query: 133 DTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK-S 191
D + WN++ G G EV L +M+R G++ +T LKAC + +
Sbjct: 136 DKTRKRTIYVWNALFRALTLAGHG-EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 192 LNCI--GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
+N + GK +H + +S++ + T L+DMYA+ GC+ A VF N ++ M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCS--KFTFSSIVKACVAIGDFRAGRQIHA 307
IA + + G A EAL F EM + S T S+++AC ++ G+ IH
Sbjct: 255 IACYAKN-----GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHG 309
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
I ++ L V +LV Y G ++ G R F+ DVVSW S+I+ +G +
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKK 369
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-QGWALKFGISNFIIVQNSQI 426
A+ + + +A+G P SV+G C+ G+++ + GI I +
Sbjct: 370 AIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV 429
Query: 427 CMYAKSGDIDSARLTFQEIEN-PDVVSWSEMICCNAHHGFANEALR 471
+ ++ +D A Q++ P W ++ HG A R
Sbjct: 430 DLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
S+ T+ ++ C ++H I D F+ L+ YS GS+D + F
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCA----DM 397
+ T K + W ++ G E L L + G + D F + V+ C +
Sbjct: 136 DKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 195
Query: 398 AAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMI 457
G++I + G S+ + + + + MYA+ G +D A F + +VVSWS MI
Sbjct: 196 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 255
Query: 458 CCNAHHGFANEALRIFELM--TVSGIKPNHITLLGVLTACSHGGLVDEG-LRYFEIMKKD 514
C A +G A EALR F M PN +T++ VL AC+ +++G L + I+++
Sbjct: 256 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR- 314
Query: 515 YGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
G+ + + + +V + GR G+LE +R + D D V W +L+ + VH
Sbjct: 315 -GLDSILPVISALVTMYGRCGKLEVGQR-VFDRMHDRDVVSWNSLISSYGVH 364
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 177/386 (45%), Gaps = 27/386 (6%)
Query: 8 SQPNPFIPSK----FPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFR 63
S +PF+ +K + L ++ ++ V R RT+++++ + ++ + L +
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 64 EARIAGLPVSDFTFAGVLAYCGSTR----NLRLGEAIHGSVLVTGMDGMIFVMNSLINMY 119
+ G+ FT+ VL C ++ +L G+ IH + G +++M +L++MY
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 120 SKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS--DY 177
++ ++ A +F + VSW+++IA Y + G F E M R D S
Sbjct: 228 ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF-EALRTFREMMRETKDSSPNSV 286
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
T+ S L+AC +L GK++H ++ L+S + V +AL+ MY + G L VF+
Sbjct: 287 TMVSVLQACASLAALE-QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 238 FRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIG 297
+ +N++I+ + GY ++A+ +F EM G + + TF S++ AC G
Sbjct: 346 MHDRDVVSWNSLISSYGVH-----GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 298 DFRAGRQIHAQICKKN---LQCDEFVGCSLVDFYSFFGSIDDG---IRCFNSTPKLDVVS 351
G+++ + + + Q + + +VD +D+ ++ + P V
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYA--CMVDLLGRANRLDEAAKMVQDMRTEPGPKV-- 456
Query: 352 WTSMIAGCVENGKFETALSLLRQFMA 377
W S++ C +G E A R+ A
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFA 482
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/678 (34%), Positives = 356/678 (52%), Gaps = 18/678 (2%)
Query: 86 STRNLRLGEAIHGSVLVTGMDGMI--FVMNSLINMYSKCKRIEAARVLFDTCDELDDVSW 143
S ++RLG +H ++ T +D F+ N LINMYSK E+AR++ + VSW
Sbjct: 18 SASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSW 76
Query: 144 NSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA 203
S+I+G + G + E M R G+ +D+T A KA + L GK +H A
Sbjct: 77 TSLISGLAQNGHFSTALVEFF-EMRREGVVPNDFTFPCAFKAVASLR-LPVTGKQIHALA 134
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGY 263
+K ++ VG + DMY KT DA +F+ N +N I+ +V+ G
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS-----NSVTDGR 189
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
REA+ F E + + + + TF + + AC G Q+H + + D V
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD 383
L+DFY I F + VSW S++A V+N + E A L + +
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+F++SSV+ CA MA G I A+K + I V ++ + MY K G I+ + F
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI--KPNHITLLGVLTACSHGGLV 501
E+ ++V+ + +I AH G + AL +FE M G PN++T + +L+ACS G V
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 502 DEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
+ G++ F+ M+ YGI +H +CIVD+LGRAG +E A FI +W AL
Sbjct: 430 ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQN 489
Query: 562 ACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
ACR+H +G A+ + +L+P + ++VLL N + AG+ A VR+ ++ G+KK
Sbjct: 490 ACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKG 549
Query: 622 PGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTEL-- 679
G SWI V ++VH F DRSH +++ I + L ++ N++E K + +S +L
Sbjct: 550 AGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLR---NEMEAAGYKPDLKLSLYDLEE 606
Query: 680 -NGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRD 738
+SHHSEKLA+ FG++SLP S P+R+ KNLR+C DCH K +S KR+II+RD
Sbjct: 607 EEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRD 666
Query: 739 AIRFHHFKEGLCSCKDYW 756
RFH FK+G+CSCKDYW
Sbjct: 667 NNRFHRFKDGICSCKDYW 684
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 184/418 (44%), Gaps = 27/418 (6%)
Query: 2 VLNLIRSQPNPFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNS------ 55
++ + S P PF+ + +L+ + +S H L L TP R+++S S
Sbjct: 32 IVKTLDSPPPPFLAN---YLINM-YSKLDHPESARLVLRL---TPARNVVSWTSLISGLA 84
Query: 56 -----PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIF 110
+L+ F E R G+ +DFTF S R G+ IH + G +F
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 111 VMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRS 170
V S +MY K + + AR LFD E + +WN+ I+ V G RE E R
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP-REAIEAFIEFRRI 203
Query: 171 GLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTD 230
+ T + L AC LN +G LH ++ ++++ V L+D Y K +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLN-LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 231 AVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIV 290
+ ++F N + +++A ++Q +A L+ + + S F SS++
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHE-----DEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 291 KACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVV 350
AC + GR IHA K ++ FVG +LVD Y G I+D + F+ P+ ++V
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Query: 351 SWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS--SVMGVCADMAAARSGEQI 406
+ S+I G G+ + AL+L + G P M+ S++ C+ A +G +I
Sbjct: 378 TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 194/436 (44%), Gaps = 36/436 (8%)
Query: 34 IRTRTLHLFDETPQRSIISCNSPAS-----------LLAFRE-ARIAGLPVSDFTFAGVL 81
+R LFDE P+R++ + N+ S + AF E RI G P S TF L
Sbjct: 158 LRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS-ITFCAFL 216
Query: 82 AYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDV 141
C +L LG +HG VL +G D + V N LI+ Y KCK+I ++ ++F + V
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHV 201
SW S++A YV+ + + L R + ++ SD+ + S L AC L +G+ +H
Sbjct: 277 SWCSLVAAYVQNHEDEKASV-LYLRSRKDIVETSDFMISSVLSACAGMAGLE-LGRSIHA 334
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
A+K + + VG+AL+DMY K GC+ D+ F+ N N++I G+ +
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ----- 389
Query: 262 GYAREALGLFCEMQMLGLNCSK--FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD-- 317
G AL LF EM G + TF S++ AC G G +I + + +
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM-RSTYGIEPG 448
Query: 318 -EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS-WTSMIAGCVENGKFETALSLLRQF 375
E C +VD G ++ P +S W ++ C +GK + L
Sbjct: 449 AEHYSC-IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Query: 376 MASGRKP--DEFIMSSVMGVCADMAAARS-GEQIQGWALKFGIS-NFIIVQNSQICMYAK 431
K + ++S+ A A + E+++G +K G ++I V+N AK
Sbjct: 508 FKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAK 567
Query: 432 SGDIDSARLTFQEIEN 447
D + + +EI+
Sbjct: 568 ----DRSHILNKEIQT 579
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/729 (32%), Positives = 380/729 (52%), Gaps = 26/729 (3%)
Query: 40 HLFDETPQRSIISCN------------SPASLLAFREARIAGLPVSDFTFAGVLAYCGST 87
++F + +R++ S N A L R + G+ +TF VL CG
Sbjct: 150 YVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGI 209
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
+L G+ +H V+ G + I V+N+LI MY KC +++AR+LFD D +SWN++I
Sbjct: 210 PDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMI 269
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCV--DKSLNCIGKMLHVCAIK 205
+GY G E EL M +D TL S + AC + D+ L G+ +H I
Sbjct: 270 SGYFENG-MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL---GRDIHAYVIT 325
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
++ V +L MY G +A +F + + TMI+G+
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL-----PD 380
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
+A+ + M + + T ++++ AC +GD G ++H K L V +L+
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 326 DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEF 385
+ YS ID + F++ P+ +V+SWTS+IAG N + AL LRQ M +P+
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ-MKMTLQPNAI 499
Query: 386 IMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI 445
+++ + CA + A G++I L+ G+ + N+ + MY + G +++A F
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS- 558
Query: 446 ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
+ DV SW+ ++ + G + + +F+ M S ++P+ IT + +L CS +V +GL
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
YF M+ DYG+T N+KH C+VDLLGRAG L++A +FI DP +W ALL ACR+
Sbjct: 619 MYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
H +G+ A + EL+ + Y+LL N+Y D GK + +VR++M++ G+ + G S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 626 WIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGM 685
W+EV KVH FL DD+ HP ++ I + LE K++++ + TE++
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIF 797
Query: 686 SHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHF 745
HSE+ A+ FG+I+ P+ V KNL +C +CH T+K ISK +R+I +RDA FHHF
Sbjct: 798 CGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHF 857
Query: 746 KEGLCSCKD 754
K+G CSC D
Sbjct: 858 KDGECSCGD 866
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 202/428 (47%), Gaps = 14/428 (3%)
Query: 59 LLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGM-IFVMNSLIN 117
L + +E R+A V + F ++ C R G ++ S+ ++ M + + + N+ +
Sbjct: 82 LNSMQELRVA---VDEDVFVALVRLCEWKRAQEEGSKVY-SIALSSMSSLGVELGNAFLA 137
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM-HRSGLDFSD 176
M+ + + A +F E + SWN ++ GY + G F E L RM G+
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG-YFDEAMCLYHRMLWVGGVKPDV 196
Query: 177 YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFE 236
YT L+ C L GK +HV ++ ++ V AL+ MY K G + A L+F+
Sbjct: 197 YTFPCVLRTCGGIPDL-ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
+ +N MI+G+ + G E L LF M+ L ++ T +S++ AC +
Sbjct: 256 RMPRRDIISWNAMISGYFEN-----GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
GD R GR IHA + D V SL Y GS + + F+ + D+VSWT+MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
+G N + A+ R KPDE +++V+ CA + +G ++ A+K +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
+++IV N+ I MY+K ID A F I +V+SW+ +I + EAL M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 477 TVSGIKPN 484
++ ++PN
Sbjct: 491 KMT-LQPN 497
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G EA+ L MQ L + + F ++V+ C G ++++ +G
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL-RQFMASGR 380
+ + + FG++ D F + ++ SW ++ G + G F+ A+ L R G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL 440
KPD + V+ C + G+++ +++G I V N+ I MY K GD+ SARL
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 441 TFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
F + D++SW+ MI +G +E L +F M + P+ +TL V++AC
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
+ G NGK E A+ LL DE + +++ +C A G ++ AL
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-E 474
S + + N+ + M+ + G++ A F ++ ++ SW+ ++ A G+ +EA+ ++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGL-RYFEIMKKDYGITANVKHSTCIVDLLGR 533
++ V G+KP+ T VL C GG+ D + + YG ++ ++ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGA 562
G ++ A R + D D + W A++
Sbjct: 244 CGDVKSA-RLLFDRMPRRDIISWNAMISG 271
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 304/547 (55%), Gaps = 6/547 (1%)
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
N + L++ Y + G L +A VF+ +N MIAG +Q + + E L L
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFE-----FNEEGLSL 78
Query: 271 FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
F EM LG + ++T S+ + G+QIH K L+ D V SL Y
Sbjct: 79 FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
G + DG S P ++V+W ++I G +NG ET L L + SG +P++ +V
Sbjct: 139 NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTV 198
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
+ C+D+A G+QI A+K G S+ + V +S I MY+K G + A F E E+ D
Sbjct: 199 LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 258
Query: 451 VSWSEMICCNAHHGFANEALRIFELMT-VSGIKPNHITLLGVLTACSHGGLVDEGLRYFE 509
V WS MI HG +EA+ +F M + ++ N + L +L ACSH GL D+GL F+
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 318
Query: 510 IMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDT 569
+M + YG +KH TC+VDLLGRAG L+ A+ I D V+W+ LL AC +HK+
Sbjct: 319 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 378
Query: 570 MMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
M + + +++++P+ +A YVLL N++ A + + EVRK M+D+ VKKE GISW E
Sbjct: 379 EMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEH 438
Query: 630 GSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHS 689
+VH F + DRS S+ IYS L+E+ +++ + + + E + HS
Sbjct: 439 KGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHS 498
Query: 690 EKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGL 749
EKLAV F ++ LP+ AP+R+IKNLRVCSDCHV K IS ++ R+I LRD RFHHF G
Sbjct: 499 EKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGK 558
Query: 750 CSCKDYW 756
CSC DYW
Sbjct: 559 CSCGDYW 565
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 173/380 (45%), Gaps = 22/380 (5%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGL 172
N LIN Y + + AR +FD + +WN++IAG ++ + E L MH G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQF-EFNEEGLSLFREMHGLGF 87
Query: 173 DFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
+YTLGS +S++ IG+ +H IK L ++VV ++L MY + G L D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVS-IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
+V S N +NT+I G Q G L L+ M++ G +K TF +++ +
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQN-----GCPETVLYLYKMMKISGCRPNKITFVTVLSS 201
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
C + G+QIHA+ K V SL+ YS G + D + F+ D V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261
Query: 353 TSMIAGCVENGKFETALSLLRQFM-ASGRKPDEFIMSSVMGVCADMAAARSGEQ-----I 406
+SMI+ +G+ + A+ L + + +E +++ C+ G + +
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHG 464
+ + K G+ ++ V + + ++G +D A + + D+V W ++ CN H
Sbjct: 322 EKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 377
Query: 465 FANEALRIFELMTVSGIKPN 484
A A R+F+ + I PN
Sbjct: 378 -AEMAQRVFK--EILQIDPN 394
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 162/351 (46%), Gaps = 23/351 (6%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P R + + N+ L FRE G ++T V + R+
Sbjct: 47 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRS 106
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ +G+ IHG + G++ + V +SL +MY + +++ ++ + + V+WN++I G
Sbjct: 107 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 166
Query: 150 YVRLGDGFREVFELLARMHR-SGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+ +G E L +M + SG + T + L +C D ++ G+ +H AIK+
Sbjct: 167 NAQ--NGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS-DLAIRGQGQQIHAEAIKIGA 223
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+S + V ++L+ MY+K GCL DA F ++ M+++MI+ + G EA+
Sbjct: 224 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFH-----GQGDEAI 278
Query: 269 GLFCEM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK-NLQCDEFVGCSLVD 326
LF M + + ++ F +++ AC G G ++ + +K + +VD
Sbjct: 279 ELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVD 338
Query: 327 FYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
G +D S P K D+V W ++++ C + E A + ++ +
Sbjct: 339 LLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/603 (35%), Positives = 325/603 (53%), Gaps = 16/603 (2%)
Query: 157 FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGT 216
F E L M RSG ++ LK+C SL G+ LH K + V T
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSC-ASLSLPVSGQQLHCHVTKGGCETEPFVLT 92
Query: 217 ALLDMYAKTGCLTDAVLVFESFRYHNDFM--YNTMIAGFLQRQTVSCGYAREALGLFCEM 274
AL+ MY K G + DA VFE + YN +I+G+ V+ +A +F M
Sbjct: 93 ALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT-----DAAYMFRRM 147
Query: 275 QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI 334
+ G++ T +V C GR +H Q K L + V S + Y GS+
Sbjct: 148 KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSV 207
Query: 335 DDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC 394
+ G R F+ P +++W ++I+G +NG L L Q +SG PD F + SV+ C
Sbjct: 208 EAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSC 267
Query: 395 ADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWS 454
A + A + G ++ G + V N+ I MYA+ G++ AR F + +VSW+
Sbjct: 268 AHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWT 327
Query: 455 EMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
MI C HG L +F+ M GI+P+ + VL+ACSH GL D+GL F MK++
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 515 YGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKH 574
Y + +H +C+VDLLGRAGRL++A FI D +W ALLGAC++HK+ M +
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAEL 447
Query: 575 IADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVH 634
+VIE EP+ YVL+ NIY+D+ ++ +R +M+++ +K+PG S++E +VH
Sbjct: 448 AFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVH 507
Query: 635 MFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDIS-GTELNGIVGMSHHSEKLA 693
+FL DRSH ++ ++ L+E+ + ++ G+ MD G E++ HSE+LA
Sbjct: 508 LFLAGDRSHEQTEEVHRMLDELETSVMELA-GN----MDCDRGEEVSSTT--REHSERLA 560
Query: 694 VTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCK 753
+ FGI++ + VIKNLRVC DCHV +K +SK+ R+ ++RDA RFH+FK+G+CSCK
Sbjct: 561 IAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCK 620
Query: 754 DYW 756
DYW
Sbjct: 621 DYW 623
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 199/466 (42%), Gaps = 23/466 (4%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
S+ +R +G F+F +L C S G+ +H V G + FV+ +LI+
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALIS 96
Query: 118 MYSKCKRIEAARVLFDTCDELDDVS--WNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
MY KC + AR +F+ + +S +N++I+GY + + RM +G+
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT-ANSKVTDAAYMFRRMKETGVSVD 155
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
T+ + C V + L +G+ LH +K L+S + V + + MY K G + +F
Sbjct: 156 SVTMLGLVPLCTVPEYL-WLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA 295
+ +N +I+G+ Q G A + L L+ +M+ G+ FT S++ +C
Sbjct: 215 DEMPVKGLITWNAVISGYSQN-----GLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 296 IGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSM 355
+G + G ++ + + FV + + Y+ G++ F+ P +VSWT+M
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-----QGWA 410
I +G E L L + G +PD + V+ C+ G ++ + +
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 411 LKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHGFANE 468
L+ G ++ + + + ++G +D A + + PD W ++ C H N
Sbjct: 390 LEPGPEHYSCLVD----LLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK---NV 442
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
+ V +PN+I +++ EG+ +M ++
Sbjct: 443 DMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 156/361 (43%), Gaps = 32/361 (8%)
Query: 19 PFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIIS-----------CNSPASLLA--FREA 65
PF+LT S + +F+E PQ S +S NS + A FR
Sbjct: 88 PFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM 147
Query: 66 RIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRI 125
+ G+ V T G++ C L LG ++HG + G+D + V+NS I MY KC +
Sbjct: 148 KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSV 207
Query: 126 EAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKA 185
EA R LFD ++WN++I+GY + G + +V EL +M SG+ +TL S L +
Sbjct: 208 EAGRRLFDEMPVKGLITWNAVISGYSQNGLAY-DVLELYEQMKSSGVCPDPFTLVSVLSS 266
Query: 186 CC---VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHN 242
C K + +GK++ N+ V A + MYA+ G L A VF+ +
Sbjct: 267 CAHLGAKKIGHEVGKLVESNG----FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKS 322
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+ MI + G L LF +M G+ F ++ AC G G
Sbjct: 323 LVSWTAMIGCYGMH-----GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 303 RQIHAQICKKNLQCD---EFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAG 358
++ + K+ + + E C LVD G +D+ + S P + D W +++
Sbjct: 378 LELFRAM-KREYKLEPGPEHYSC-LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 359 C 359
C
Sbjct: 436 C 436
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 335 DDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC 394
+ + STP W + F ++SL R + SG PD F ++ C
Sbjct: 10 NSAVAAVASTP------WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC 63
Query: 395 ADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD----V 450
A ++ SG+Q+ K G V + I MY K G + AR F+ ENP
Sbjct: 64 ASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE--ENPQSSQLS 121
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
V ++ +I + +A +F M +G+ + +T+LG++ C+
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 309/517 (59%), Gaps = 7/517 (1%)
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGL-NCSKFTFSSIVKACVAIGDFR 300
N F++NT+I G+ + G + A L+ EM++ GL T+ ++KA + D R
Sbjct: 84 NVFIWNTLIRGYAE-----IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
G IH+ + + +V SL+ Y+ G + + F+ P+ D+V+W S+I G
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
ENGK E AL+L + + G KPD F + S++ CA + A G+++ + +K G++ +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM-TVS 479
N + +YA+ G ++ A+ F E+ + + VSW+ +I A +GF EA+ +F+ M +
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
G+ P IT +G+L ACSH G+V EG YF M+++Y I ++H C+VDLL RAG+++
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYND 599
A +I + V+WR LLGAC VH D+ + + ++++LEP+ + YVLL N+Y
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
Query: 600 AGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVK 659
+ ++RK M GVKK PG S +EVG++VH FL+ D+SHP S IY++L+EM +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498
Query: 660 INKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDC 719
+ + + + + E + +HSEK+A+ F +IS P+ +P+ V+KNLRVC+DC
Sbjct: 499 LRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADC 558
Query: 720 HVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
H+ +KL+SK+ R+I++RD RFHHFK G CSC+DYW
Sbjct: 559 HLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 15/321 (4%)
Query: 54 NSPASLLAFREARIAGLPVSD-FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVM 112
NS ++ +RE R++GL D T+ ++ + ++RLGE IH V+ +G +I+V
Sbjct: 100 NSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQ 159
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGL 172
NSL+++Y+ C + +A +FD E D V+WNS+I G+ G E L M+ G+
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP-EEALALYTEMNSKGI 218
Query: 173 DFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
+T+ S L AC +L +GK +HV IK+ L N+ LLD+YA+ G + +A
Sbjct: 219 KPDGFTIVSLLSACAKIGALT-LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML-GLNCSKFTFSSIVK 291
+F+ N + ++I G G+ +EA+ LF M+ GL + TF I+
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVN-----GFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSLVDFYSFFGSIDDGIRCFNSTP-KL 347
AC G + G + ++ ++ + + E GC +VD + G + S P +
Sbjct: 333 ACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGC-MVDLLARAGQVKKAYEYIKSMPMQP 390
Query: 348 DVVSWTSMIAGCVENGKFETA 368
+VV W +++ C +G + A
Sbjct: 391 NVVIWRTLLGACTVHGDSDLA 411
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 155/347 (44%), Gaps = 13/347 (3%)
Query: 143 WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHV 201
WN++I GY +G+ F L M SGL D +T +KA + +G+ +H
Sbjct: 88 WNTLIRGYAEIGNSI-SAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR-LGETIHS 145
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
I+ S + V +LL +YA G + A VF+ + +N++I GF +
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN----- 200
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G EAL L+ EM G+ FT S++ AC IG G+++H + K L +
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-GR 380
L+D Y+ G +++ F+ + VSWTS+I G NG + A+ L + ++ G
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 381 KPDEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
P E ++ C+ + G E + ++ I I + + A++G + A
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 440 LTFQEIE-NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+ + P+VV W ++ HG + L F + + ++PNH
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNH 425
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/779 (30%), Positives = 370/779 (47%), Gaps = 102/779 (13%)
Query: 77 FAGVLAYCGSTR--NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
+A L C R +L+L A+HG+++ G ++N LI++Y K + AR LFD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 135 CDELDDVSWNSIIAGYVRLGDGF--REVFE------------------------------ 162
E D ++ ++++GY GD R VFE
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 163 LLARMHRSGLDFSDYTLGSALK--ACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLD 220
L +M G ++T S L A D C+ H A+K V AL+
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV--QFHAAALKSGAGYITSVSNALVS 192
Query: 221 MYAKTGC----LTDAVLVFESFRYHNDFMYNTMIAGFLQRQT------------------ 258
+Y+K L A VF+ ++ + TM+ G+++
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 259 ---------VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
V+ G+ +EAL + M G+ +FT+ S+++AC G + G+Q+HA +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS--------------- 354
++ F SLV Y G D+ F P D+VSW +
Sbjct: 313 LRREDFSFHFDN-SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 355 ----------------MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
MI+G ENG E L L G +P ++ S + CA +
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
A +G+Q LK G + + N+ I MYAK G ++ AR F+ + D VSW+ +I
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGIT 518
HG EA+ ++E M GI+P+ ITLL VLTACSH GLVD+G +YF+ M+ Y I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 519 ANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADR 578
H ++DLL R+G+ DA+ I F +W ALL CRVH + +G AD+
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 579 VIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLV 638
+ L P +Y+LL N++ G+ + VRKLM+D+GVKKE SWIE+ ++VH FLV
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 639 DDRSHPMSQLIYSRLEEMLVKINKIEF-GDEKLPMDISGTELNGIVGMSHHSEKLAVTFG 697
DD SHP ++ +Y L+++ ++ ++ + D + ++ + ++ HSEK+AV FG
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731
Query: 698 IISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
++ LP +R+ KNLR C DCH + +S + +R IILRD RFHHF+ G CSC ++W
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 219/528 (41%), Gaps = 90/528 (17%)
Query: 69 GLPVSDFTFAGVLAYCG-STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR--- 124
G +FTFA VLA + + H + L +G + V N+L+++YSKC
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 125 -IEAARVLFDTCDELDDVSWNSIIAGYVRLG---------DG------------------ 156
+ +AR +FD E D+ SW +++ GYV+ G +G
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 157 ----FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS-- 210
++E E++ RM SG++ ++T S ++AC L +GK +H ++ + S
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ-LGKQVHAYVLRREDFSFH 321
Query: 211 ----------------------------NMVVGTALLDMYAKTGCLTDAVLVFESFRYHN 242
++V ALL Y +G + +A L+F+ + N
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+ MI+G + G+ E L LF M+ G + FS +K+C +G + G
Sbjct: 382 ILSWMIMISGLAEN-----GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
+Q HAQ+ K G +L+ Y+ G +++ + F + P LD VSW ++IA ++
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-----QGWALKFGISN 417
G A+ + + + G +PD + +V+ C+ G + + + G +
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 418 FIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICCNAHHGFANEALRIFELM 476
+ + I + +SG A + + P W ++ HG N L I
Sbjct: 557 YARL----IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG--NMELGIIAAD 610
Query: 477 TVSGIKPNH---ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
+ G+ P H LL + A + G +E R ++M +D G+ V
Sbjct: 611 KLFGLIPEHDGTYMLLSNMHAAT--GQWEEVARVRKLM-RDRGVKKEV 655
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 43/336 (12%)
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
+G+ + +FT+ V+ C + L+LG+ +H VL D NSL+++Y KC + +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDE 338
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLG-----------------------------DGF- 157
AR +F+ D VSWN++++GYV G +GF
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 158 REVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTA 217
E +L + M R G + DY A+K+C V + C G+ H +K+ +S++ G A
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY-CNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 218 LLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML 277
L+ MYAK G + +A VF + + +N +IA Q G+ EA+ ++ EM
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH-----GHGAEAVDVYEEMLKK 512
Query: 278 GLNCSKFTFSSIVKACVAIGDFRAGRQIH---AQICKKNLQCDEFVGCSLVDFYSFFGSI 334
G+ + T +++ AC G GR+ + + D + L+D G
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKF 570
Query: 335 DDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETAL 369
D S P K W ++++GC +G E +
Sbjct: 571 SDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 329/589 (55%), Gaps = 7/589 (1%)
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCL 228
R +FS+ L + C K H I++DL ++ + L++ Y+K G +
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
A VF+ + +NTMI + + + S EAL +F EM+ G S+FT SS
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMES-----EALDIFLEMRNEGFKFSEFTISS 167
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
++ AC D +++H K + + +VG +L+D Y+ G I D ++ F S
Sbjct: 168 VLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS 227
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
V+W+SM+AG V+N +E AL L R+ + ++F +SSV+ C+++AA G+Q+
Sbjct: 228 SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE 468
K G + + V +S + MYAK G + + + F E++ ++ W+ +I A H E
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKE 347
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
+ +FE M G+ PN +T +L+ C H GLV+EG R+F++M+ YG++ NV H +C+V
Sbjct: 348 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 407
Query: 529 DLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
D+LGRAG L +A I F +W +LL +CRV+K+ + + A+++ ELEP A
Sbjct: 408 DILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 467
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQL 648
++VLL NIY + + + RKL++D VKK G SWI++ KVH F V + HP +
Sbjct: 468 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIRE 527
Query: 649 IYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVG-MSHHSEKLAVTFGIISLPKSAPV 707
I S L+ +++K K + + ++ E+ + HSEKLA+ FG++ LP+S+PV
Sbjct: 528 ICSTLDNLVIKFRKFGY-KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPV 586
Query: 708 RVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
R++KNLR+C DCH MK S +R II+RD RFHHF +G CSC D+W
Sbjct: 587 RIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 211/422 (50%), Gaps = 17/422 (4%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELD 139
+L C + +A HG ++ ++G + ++N LIN YSKC +E AR +FD E
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 140 DVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD-KSLNCIGKM 198
VSWN++I Y R E ++ M G FS++T+ S L AC V+ +L C K
Sbjct: 127 LVSWNTMIGLYTR-NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC--KK 183
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
LH ++K ++ N+ VGTALLD+YAK G + DAV VFES + + +++M+AG++Q +
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
EAL L+ Q + L ++FT SS++ AC + G+Q+HA ICK +
Sbjct: 244 Y-----EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS 378
FV S VD Y+ GS+ + F+ + ++ W ++I+G ++ + + + L +
Sbjct: 299 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 379 GRKPDEFIMSSVMGVCADMAAARSGEQ-IQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
G P+E SS++ VC G + + +G+S ++ + + + ++G +
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 438 ARLTFQEIE-NPDVVSWSEMIC-CNAHHGF---ANEALRIFELMTVSGIKPNHITLLGVL 492
A + I +P W ++ C + A ++FEL + NH+ L +
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENA--GNHVLLSNIY 476
Query: 493 TA 494
A
Sbjct: 477 AA 478
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 20/333 (6%)
Query: 40 HLFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTR 88
+FD +RS++S N+ L F E R G S+FT + VL+ CG
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ + +H + T +D ++V +L+++Y+KC I+ A +F++ + V+W+S++A
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
GYV+ + E L R R L+ + +TL S + AC +L GK +H K
Sbjct: 237 GYVQ-NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL-IEGKQMHAVICKSGF 294
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
SN+ V ++ +DMYAK G L ++ ++F + N ++NT+I+GF + +E +
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH-----ARPKEVM 349
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS-LVDF 327
LF +MQ G++ ++ TFSS++ C G GR+ + V S +VD
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI 409
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVS-WTSMIAGC 359
G + + S P S W S++A C
Sbjct: 410 LGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/763 (29%), Positives = 385/763 (50%), Gaps = 86/763 (11%)
Query: 41 LFDETPQR-----------SIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFDE P+R ++ S N ++ FRE + +G D T +L C +
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
G IHG VL G++ + + NSLI MYS+ ++E +R +F++ + + SWNSI++
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
Query: 150 YVRLG----------------------------DGF------REVFELLARMHRSGLDFS 175
Y +LG G+ ++ +L RM +GL S
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
++ S L+A L +GK +H ++ L ++ V T L+DMY KTG L A +VF
Sbjct: 225 TSSISSLLQAVAEPGHLK-LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA 295
+ N +N++++G + +C ++A L M+ G+ T++S+
Sbjct: 284 DMMDAKNIVAWNSLVSGL----SYAC-LLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 296 IGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSM 355
+G + ++ +K + P +VVSWT++
Sbjct: 339 LGKPEKALDVIGKMKEKGV-----------------------------AP--NVVSWTAI 367
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
+GC +NG F AL + + G P+ MS+++ + ++ SG+++ G+ L+ +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
V + + MY KSGD+ SA F I+N + SW+ M+ A G E + F +
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
M +G++P+ IT VL+ C + GLV EG +YF++M+ YGI ++H +C+VDLLGR+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 536 RLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYN 595
L++A FI D +W A L +C++H+D + + R+ LEPH +A+Y+++ N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 596 IYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEE 655
+Y++ + + +R LM++ V+ + SWI++ VH+F + ++HP IY L +
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYK 667
Query: 656 MLVKINKIEFGDEK--LPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNL 713
++ ++ K + + + DIS +E + + H+EKLA+T+G+I AP+RV+KN
Sbjct: 668 LVSEMKKSGYVPDTSCIHQDISDSEKEKL--LMGHTEKLAMTYGLIKKKGLAPIRVVKNT 725
Query: 714 RVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+CSD H K +S L R+I+L++ R HHF++G CSC D W
Sbjct: 726 NICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 209/485 (43%), Gaps = 75/485 (15%)
Query: 92 LGEAIHGSVLVTGMDGM-IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGY 150
LG IHG ++ G+D V+++ + Y +C + A LFD + DD++WN I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 151 VRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS 210
+R G+ + + EL M SG D T+ L+ C +K G+ +H ++L L S
Sbjct: 65 LRSGN-WEKAVELFREMQFSGAKAYDSTMVKLLQVCS-NKEGFAEGRQIHGYVLRLGLES 122
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTV----------- 259
N+ + +L+ MY++ G L + VF S + N +N++++ + + V
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 260 -------------------SCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
S G +++A+ + MQ+ GL S + SS+++A G +
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
G+ IH I + L D +V +L+D Y G + F+ ++V+W S+++G
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
+ A +L+ + G KPD +S+ A + + G + G++
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA---- 358
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG 480
P+VVSW+ + + +G AL++F M G
Sbjct: 359 ---------------------------PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 481 IKPNHI---TLLGVLTACS--HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
+ PN TLL +L S H G G ++K+ A V +T +VD+ G++G
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGF----CLRKNLICDAYV--ATALVDMYGKSG 445
Query: 536 RLEDA 540
L+ A
Sbjct: 446 DLQSA 450
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 164/370 (44%), Gaps = 46/370 (12%)
Query: 302 GRQIHAQICKKNL-QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
G IH + K+ L D V + + FY S+ + F+ PK D ++W ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
+G +E A+ L R+ SG K + M ++ VC++ G QI G+ L+ G+ + +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIEN--------------------------------- 447
+ NS I MY+++G ++ +R F +++
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 448 --PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
PD+V+W+ ++ A G + +A+ + + M ++G+KP+ ++ +L A + G + G
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
+ ++ + +V T ++D+ + G L A R + D A + V W +L+
Sbjct: 246 AIHGYILRNQ-LWYDVYVETTLIDMYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNI----YNDAGKEKRALEVRKLMQDQGVKKE 621
+ K +I +E + +N Y GK ++AL+V M+++GV
Sbjct: 304 ---ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 622 PGISWIEVGS 631
+SW + S
Sbjct: 361 V-VSWTAIFS 369
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/668 (31%), Positives = 343/668 (51%), Gaps = 16/668 (2%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ IH +LV G+ F++ LI+ S I AR +FD WN+II GY R
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR- 96
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
+ F++ + + M + + +T LKAC L +G+ +H +L ++++
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ-MGRFVHAQVFRLGFDADVF 155
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFM--YNTMIAGFLQRQTVSCGYAREALGLF 271
V L+ +YAK L A VFE + + +++ + Q G EAL +F
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN-----GEPMEALEIF 210
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
+M+ + + S++ A + D + GR IHA + K L+ + + SL Y+
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G + F+ +++ W +MI+G +NG A+ + + + +PD ++S +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVV 451
CA + + + + + + + + ++ I M+AK G ++ ARL F + DVV
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 452 SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM 511
WS MI HG A EA+ ++ M G+ PN +T LG+L AC+H G+V EG +F M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 512 KKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMM 571
D+ I +H C++DLLGRAG L+ A I +W ALL AC+ H+ +
Sbjct: 451 -ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 572 GKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGS 631
G++ A ++ ++P YV L N+Y A R EVR M+++G+ K+ G SW+EV
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Query: 632 KVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVG---MSHH 688
++ F V D+SHP + I ++E + ++ + F K D S +LN + H
Sbjct: 570 RLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK---DASLHDLNDEEAEETLCSH 626
Query: 689 SEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEG 748
SE++A+ +G+IS P+ P+R+ KNLR C +CH KLISKL R+I++RD RFHHFK+G
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 749 LCSCKDYW 756
+CSC DYW
Sbjct: 687 VCSCGDYW 694
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 216/477 (45%), Gaps = 32/477 (6%)
Query: 40 HLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+FD+ P+ I N+ +LL + ++A + FTF +L C
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD--TCDELDDVSWNSI 146
+L++G +H V G D +FV N LI +Y+KC+R+ +AR +F+ E VSW +I
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
++ Y + G+ E E+ ++M + + L S L A + L G+ +H +K+
Sbjct: 194 VSAYAQNGEPM-EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ-GRSIHASVVKM 251
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
L + +L MYAK G + A ++F+ + N ++N MI+G+ + GYARE
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN-----GYARE 306
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A+ +F EM + + +S + AC +G R ++ + + + + D F+ +L+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
++ GS++ F+ T DVV W++MI G +G+ A+SL R G P++
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ-----ICMYAKSGDIDSARLT 441
++ MA SG +GW +++ I Q I + ++G +D A
Sbjct: 427 FLGLL-----MACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 442 FQEIE-NPDVVSWSEMI-CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
+ + P V W ++ C H +L ++ H L L A +
Sbjct: 482 IKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/698 (31%), Positives = 372/698 (53%), Gaps = 22/698 (3%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L + E AG+P ++FTF +L S L G+ IH +++V G+ + + SL++
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLG-ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
YS+ ++E A + ++ E D W S+++G+VR +E M GL +++
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRA-KEAVGTFLEMRSLGLQPNNF 326
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK-TGCLTDAVLVFE 236
T + L C +SL+ GK +H IK+ + VG AL+DMY K + +A VF
Sbjct: 327 TYSAILSLCSAVRSLD-FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
+ N + T+I G V G+ ++ GL EM + + T S +++AC +
Sbjct: 386 AMVSPNVVSWTTLILGL-----VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
R +IHA + ++++ + VG SLVD Y+ +D S + D +++TS++
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
E GK E ALS++ G + D+ + + A++ A +G+ + +++K G S
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS 560
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
V NS + MY+K G ++ A+ F+EI PDVVSW+ ++ A +GF + AL FE M
Sbjct: 561 GAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
+ +P+ +T L +L+ACS+G L D GL YF++MKK Y I V+H +V +LGRAGR
Sbjct: 621 RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGR 680
Query: 537 LEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNI 596
LE+A + + ++++ LL ACR + +G+ +A++ + L P A Y+LL ++
Sbjct: 681 LEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADL 740
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSH-PMSQLIYSRLEE 655
Y+++GK + A + R LM ++ + K+ G S +EV KVH F+ +D + + IY+ +E
Sbjct: 741 YDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIES 800
Query: 656 MLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRV 715
+ +I + G+ G S HS K AV +G I APV V+KN +
Sbjct: 801 IKEEIKRF------------GSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKIL 848
Query: 716 CSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCK 753
C DCH + ++++L +KI +RD + H FK G CSCK
Sbjct: 849 CKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 276/568 (48%), Gaps = 26/568 (4%)
Query: 41 LFDETPQRSII-----------SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFDE R++ S ++L F E +G ++FTF+ V+ C R+
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ G +HGSV+ TG +G V +SL ++YSKC + + A LF + D +SW +I+
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC-IGKMLHVCAIKLDL 208
V +RE + + M ++G+ +++T L A L GK +H I +
Sbjct: 200 LVG-ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF---LGLEFGKTIHSNIIVRGI 255
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
N+V+ T+L+D Y++ + DAV V S + F++ ++++GF++ A+EA+
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR-----AKEAV 310
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
G F EM+ LGL + FT+S+I+ C A+ G+QIH+Q K + VG +LVD Y
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Query: 329 SFFGSID-DGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
+ + + R F + +VVSWT++I G V++G + LL + + +P+ +
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTL 430
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
S V+ C+ + R +I + L+ + ++V NS + YA S +D A + ++
Sbjct: 431 SGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
D ++++ ++ G AL + M GI+ + ++L G ++A ++ G ++ G ++
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KH 549
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG--ACRV 565
G + +VD+ + G LEDAK+ + + D V W L+ A
Sbjct: 550 LHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK-VFEEIATPDVVSWNGLVSGLASNG 608
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLL 593
+ + R+ E EP + +LL
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTFLILL 636
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 218/419 (52%), Gaps = 12/419 (2%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELD 139
+L++C S + R+G IH V+ G+ + + N+L+++Y K I AR LFD
Sbjct: 30 ILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 140 DVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKML 199
+W +I+ + + F L M SG +++T S +++C + ++ G+ +
Sbjct: 89 VFAWTVMISAFTK-SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR-V 146
Query: 200 HVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTV 259
H IK N VVG++L D+Y+K G +A +F S + + + MI+ V
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSL-----V 201
Query: 260 SCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF 319
REAL + EM G+ ++FTF ++ A +G G+ IH+ I + + +
Sbjct: 202 GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV 260
Query: 320 VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASG 379
+ SLVDFYS F ++D +R NS+ + DV WTS+++G V N + + A+ + + G
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAK--SGDIDS 437
+P+ F S+++ +C+ + + G+QI +K G + V N+ + MY K + ++++
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 438 ARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
+R+ F + +P+VVSW+ +I HGF + + M ++PN +TL GVL ACS
Sbjct: 381 SRV-FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 179/389 (46%), Gaps = 16/389 (4%)
Query: 179 LGSALKAC------CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
LG+ K+C C S + IG +H IK L N+ + LL +Y KT + +A
Sbjct: 20 LGNLQKSCIRILSFCESNS-SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNAR 78
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
+F+ + F + MI+ F + Q + AL LF EM G + ++FTFSS+V++
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFA-----SALSLFEEMMASGTHPNEFTFSSVVRS 133
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
C + D G ++H + K + + VG SL D YS G + F+S D +SW
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW 193
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
T MI+ V K+ AL + + +G P+EF ++G + G+ I +
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG-ASSFLGLEFGKTIHSNIIV 252
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
GI ++++ S + Y++ ++ A DV W+ ++ + A EA+
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLL 531
F M G++PN+ T +L+ CS +D G + + + +K + + +V ++ +VD+
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA--LVDMY 370
Query: 532 GRAGRLEDAKRFILDSGFADDPVMWRALL 560
+ E + + + + V W L+
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLI 399
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/739 (31%), Positives = 375/739 (50%), Gaps = 46/739 (6%)
Query: 53 CNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVM 112
CN ++L F +G+ +TF L+ C +R G IHG ++ G +FV
Sbjct: 115 CNE--AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQ 172
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHR-SG 171
NSL++ Y++C +++AR +FD E + VSW S+I GY R D ++ +L RM R
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEE 231
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ + T+ + AC + L G+ ++ + N ++ +AL+DMY K + A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLE-TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVK 291
+F+ + N + N M + ++++ G REALG+F M G+ + + S +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQ-----GLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQC---------DEFVGC-------------------- 322
+C + + G+ H + + + D ++ C
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 323 --SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-G 379
S+V Y G +D F + P+ ++VSW ++I+G V+ FE A+ + + G
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
D M S+ C + A + I + K GI + + + + M+++ GD +SA
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
F + N DV +W+ I A G A A+ +F+ M G+KP+ + +G LTACSHGG
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 500 LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRAL 559
LV +G F M K +G++ H C+VDLLGRAG LE+A + I D + V+W +L
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 560 LGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
L ACRV + M + A+++ L P SYVLL N+Y AG+ +VR M+++G++
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 620 KEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDE--KLPMDISGT 677
K PG S I++ K H F D SHP I + L+E+ + + + + + MD+
Sbjct: 706 KPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEK 765
Query: 678 ELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILR 737
E I +S HSEKLA+ +G+IS K +R++KNLRVCSDCH K SK+ R+IILR
Sbjct: 766 E--KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 738 DAIRFHHFKEGLCSCKDYW 756
D RFH+ ++G CSC D+W
Sbjct: 824 DNNRFHYIRQGKCSCGDFW 842
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 149/322 (46%), Gaps = 14/322 (4%)
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC---LTDAVLVFE- 236
S+LK C L KM H K L++++ T L+ + G L+ A VFE
Sbjct: 37 SSLKNCKTIDEL----KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
S Y FMYN++I G+ S G EA+ LF M G++ K+TF + AC
Sbjct: 93 SESYGTCFMYNSLIRGY-----ASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
G QIH I K D FV SLV FY+ G +D + F+ + +VVSWTSMI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 357 AGCVENGKFETALSL-LRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
G + A+ L R P+ M V+ CA + +GE++ + GI
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
++ ++ + MY K ID A+ F E ++ + M G EAL +F L
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 476 MTVSGIKPNHITLLGVLTACSH 497
M SG++P+ I++L +++CS
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQ 349
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 281 CSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG---SIDDG 337
C+K T SS+ K C I + + H + K+ L D LV G S+
Sbjct: 31 CTKATPSSL-KNCKTIDELK---MFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFA 86
Query: 338 IRCF-NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
F NS + S+I G +G A+ L + M SG PD++ + CA
Sbjct: 87 KEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK 146
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEM 456
A +G QI G +K G + + VQNS + YA+ G++DSAR F E+ +VVSW+ M
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 457 ICCNAHHGFANEALRI-FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDY 515
IC A FA +A+ + F ++ + PN +T++ V++AC+ ++ G + + + ++
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNS 265
Query: 516 GITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFAD 551
GI N + +VD+ + ++ AKR + G ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 325/594 (54%), Gaps = 24/594 (4%)
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
LD + +L +A+K+C + + ++LH +K + +G L+ Y + G A
Sbjct: 30 LDANVSSLIAAVKSCVSIE----LCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM--LGLNCSKFTFSSI 289
+F+ + +N++I+G+ R GY + + M + +G ++ TF S+
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGR-----GYLGKCFEVLSRMMISEVGFRPNEVTFLSM 140
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV 349
+ ACV G GR IH + K + + V + +++Y G + + F ++
Sbjct: 141 ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL 200
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
VSW +MI ++NG E L+ G +PD+ +V+ C DM R + I G
Sbjct: 201 VSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEA 469
+ G S + + + +Y+K G ++ + F EI +PD ++W+ M+ A HGF +A
Sbjct: 261 IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 470 LRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVD 529
++ FELM GI P+H+T +L ACSH GLV+EG YFE M K Y I + H +C+VD
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVD 380
Query: 530 LLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAAS 589
LLGR+G L+DA I + +W ALLGACRV+KDT +G A+R+ ELEP +
Sbjct: 381 LLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRN 440
Query: 590 YVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLI 649
YV+L NIY+ +G K A +R LM+ +G+ + G S+IE G+K+H F+V D SHP S+ I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Query: 650 YSRLEEMLVKI-------NKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLP 702
+L+E+ K+ +K EF + D+ +N HSEK+A+ FG++ +
Sbjct: 501 QKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMIN------QHSEKIAMAFGLLVVS 554
Query: 703 KSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
P+ + KNLR+C DCH T K IS +EKR+II+RD+ RFHHF +G CSC DYW
Sbjct: 555 PMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 197/449 (43%), Gaps = 22/449 (4%)
Query: 74 DFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD 133
D + ++A S ++ L +H V+ + F+ + L+ Y + A LFD
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 134 TCDELDDVSWNSIIAGYVRLGDGF-REVFELLARMHRSGLDF--SDYTLGSALKACCVDK 190
E D VSWNS+I+GY G G+ + FE+L+RM S + F ++ T S + AC
Sbjct: 91 EMPERDLVSWNSLISGYS--GRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGG 148
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMI 250
S G+ +H +K + + V A ++ Y KTG LT + +FE N +NTMI
Sbjct: 149 SKE-EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 251 AGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
LQ G A + L F + +G + TF +++++C +G R + IH I
Sbjct: 208 VIHLQN-----GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALS 370
++ + +L+D YS G ++D F+ D ++WT+M+A +G A+
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 371 LLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ-IQGWALKFGISNFIIVQNSQICMY 429
+ G PD + ++ C+ G+ + + ++ I + + + +
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 430 AKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHGF---ANEALRIFELMTVSGIKPN 484
+SG + A +E+ P W ++ C + A R+FEL G N
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG--RN 440
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKK 513
++ L + +A GL + R +MK+
Sbjct: 441 YVMLSNIYSA---SGLWKDASRIRNLMKQ 466
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 26/336 (7%)
Query: 41 LFDETPQRSIISCNSPASLLAFRE---------ARI----AGLPVSDFTFAGVLAYCGST 87
LFDE P+R ++S NS S + R +R+ G ++ TF +++ C
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
+ G IHG V+ G+ + V+N+ IN Y K + ++ LF+ + VSWN++I
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
+ L +G E M R D A+ C D + + + +H +
Sbjct: 208 V--IHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
+ N + TALLD+Y+K G L D+ VF + + M+A + + G+ R+A
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY-----ATHGFGRDA 320
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK---NLQCDEFVGCSL 324
+ F M G++ TF+ ++ AC G G+ + K+ + + D + +
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY--SCM 378
Query: 325 VDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGC 359
VD G + D P + W +++ C
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 12/207 (5%)
Query: 36 TRTLHLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYC 84
T + LF++ ++++S N+ L F +R G TF VL C
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
+RL + IHG ++ G G + +L+++YSK R+E + +F D ++W
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
+++A Y G G R+ + M G+ T L AC + +
Sbjct: 306 AMLAAYATHGFG-RDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ ++ + + ++D+ ++G L DA
Sbjct: 365 RYRIDPRLDHYSCMVDLLGRSGLLQDA 391
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/633 (33%), Positives = 330/633 (52%), Gaps = 74/633 (11%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG- 154
+H SV+ +G IF+ N LI+ YSKC +E R +FD + + +WNS++ G +LG
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 155 -----------------------DGF------REVFELLARMHRSGLDFSDYTLGSALKA 185
GF E A MH+ G ++Y+ S L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 186 CCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
C +N G +H K S++ +G+AL+DMY+K G + DA VF+ N
Sbjct: 162 CSGLNDMN-KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+N++I F Q G A EAL +F M + + T +S++ AC ++ + G+++
Sbjct: 221 WNSLITCFEQN-----GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 306 HAQICKKN-LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP------------------- 345
H ++ K + L+ D + + VD Y+ I + F+S P
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 346 ------------KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
+ +VVSW ++IAG +NG+ E ALSL P + ++++
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Query: 394 CADMAAARSGEQIQ------GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
CAD+A G Q G+ + G + I V NS I MY K G ++ L F+++
Sbjct: 396 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
D VSW+ MI A +G+ NEAL +F M SG KP+HIT++GVL+AC H G V+EG Y
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK 567
F M +D+G+ H TC+VDLLGRAG LE+AK I + D V+W +LL AC+VH+
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
+ +GK++A++++E+EP + YVLL N+Y + GK + + VRK M+ +GV K+PG SWI
Sbjct: 576 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Query: 628 EVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKI 660
++ H+F+V D+SHP + I+S L+ ++ ++
Sbjct: 636 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 49/469 (10%)
Query: 41 LFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTRN 89
LF P+R + NS S A F G +++++FA VL+ C +
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ G +H + + +++ ++L++MYSKC + A+ +FD + + VSWNS+I
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD-L 208
+ + G E ++ M S ++ + TL S + AC ++ +G+ +H +K D L
Sbjct: 228 FEQNGPAV-EALDVFQMMLESRVEPDEVTLASVISACASLSAIK-VGQEVHGRVVKNDKL 285
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF--------------- 253
+++++ A +DMYAK + +A +F+S N +MI+G+
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 254 -LQRQTVS-----CGYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+R VS GY + EAL LFC ++ + + ++F++I+KAC + + G
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 303 RQIHAQICKKNLQC------DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
Q H + K + D FVG SL+D Y G +++G F + D VSW +MI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ-IQGWALKFGI 415
G +NG AL L R+ + SG KPD M V+ C G FG+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAH 462
+ + + ++G ++ A+ +E+ PD V W ++ C H
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 205/451 (45%), Gaps = 65/451 (14%)
Query: 174 FSDYTLGSALKACCVDKSLNCIG-KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
F+D + + L C+ L+ I + +H IK ++ + + L+D Y+K G L D
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 233 LVFESFRYHNDFMYNTMIA-----GFLQR----------------QTVSCGYAR-----E 266
VF+ N + +N+++ GFL ++ G+A+ E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
AL F M G ++++F+S++ AC + D G Q+H+ I K D ++G +LVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
YS G+++D R F+ +VVSW S+I +NG AL + + + S +PDE
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFG-ISNFIIVQNSQICMYAK-------------- 431
++SV+ CA ++A + G+++ G +K + N II+ N+ + MYAK
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 432 -----------------SGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFE 474
+ +ARL F ++ +VVSW+ +I +G EAL +F
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLR-YFEIMKKDY----GITANVKHSTCIVD 529
L+ + P H + +L AC+ + G++ + ++K + G ++ ++D
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 530 LLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
+ + G +E+ + D V W A++
Sbjct: 436 MYVKCGCVEEG-YLVFRKMMERDCVSWNAMI 465
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 311/577 (53%), Gaps = 7/577 (1%)
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
AL C+DK G+ +H IK + T LL Y K CL DA V +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
N + MI+ + Q G++ EAL +F EM ++FTF++++ +C+
Sbjct: 117 NVVSWTAMISRYSQ-----TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVE 361
G+QIH I K N FVG SL+D Y+ G I + F P+ DVVS T++IAG +
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
G E AL + + + G P+ +S++ + +A G+Q L+ + + ++
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT-VSG 480
QNS I MY+K G++ AR F + +SW+ M+ + HG E L +F LM
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 481 IKPNHITLLGVLTACSHGGLVDEGLRYFEIM-KKDYGITANVKHSTCIVDLLGRAGRLED 539
+KP+ +TLL VL+ CSHG + D GL F+ M +YG +H CIVD+LGRAGR+++
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYND 599
A FI + +LLGACRVH +G+ + R+IE+EP A +YV+L N+Y
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 600 AGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVK 659
AG+ VR +M + V KEPG SWI+ +H F +DR+HP + + ++++E+ +K
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 660 INKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDC 719
+ + + + + E + HSEKLA+TFG+I+ + P+RV KNLR+C DC
Sbjct: 532 MKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDC 591
Query: 720 HVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
H K+ SK+ +R++ LRD RFH +G+CSC DYW
Sbjct: 592 HNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 187/412 (45%), Gaps = 26/412 (6%)
Query: 42 FDETPQRSIISCNSPASLL--------AFREARIAGLPVSDFTFAGVLAYCGSTRNLRLG 93
F +P ++ P S L A E + G + + +L C R LR G
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ +H ++ T ++ L+ Y KC +E AR + D E + VSW ++I+ Y +
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
G E + A M RS +++T + L +C L +GK +H +K + +S++
Sbjct: 132 GHS-SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLG-LGKQIHGLIVKWNYDSHIF 189
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
VG++LLDMYAK G + +A +FE + +IAG+ Q G EAL +F
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ-----LGLDEEALEMFHR 244
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
+ G++ + T++S++ A + G+Q H + ++ L + SL+D YS G+
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMG 392
+ R F++ P+ +SW +M+ G ++G L L R R KPD + +V+
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 393 VCADMAAARSGEQI------QGWALKFGISNFIIVQNSQICMYAKSGDIDSA 438
C+ +G I + K G ++ + + M ++G ID A
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI----VDMLGRAGRIDEA 412
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 158/305 (51%), Gaps = 7/305 (2%)
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
Q S G +EAL EM MLG + +++ AC+ R G+++HA + K
Sbjct: 29 QLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLP 85
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
++ L+ FY ++D + + P+ +VVSWT+MI+ + G AL++ + M
Sbjct: 86 ATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
S KP+EF ++V+ C + G+QI G +K+ + I V +S + MYAK+G I
Sbjct: 146 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
AR F+ + DVVS + +I A G EAL +F + G+ PN++T +LTA S
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 497 HGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM 555
L+D G + + +++++ A +++S ++D+ + G L A+R + D+ +
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNS--LIDMYSKCGNLSYARR-LFDNMPERTAIS 322
Query: 556 WRALL 560
W A+L
Sbjct: 323 WNAML 327
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 124/243 (51%), Gaps = 20/243 (8%)
Query: 41 LFDETPQRSIISC-----------NSPASLLAFREA-RIAGLPVSDFTFAGVLAYCGSTR 88
+ DE P+++++S +S +L F E R G P ++FTFA VL C
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRAS 167
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L LG+ IHG ++ D IFV +SL++MY+K +I+ AR +F+ E D VS +IIA
Sbjct: 168 GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIA 227
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
GY +LG E E+ R+H G+ + T S L A L+ GK H ++ +L
Sbjct: 228 GYAQLGLD-EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH-GKQAHCHVLRREL 285
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
V+ +L+DMY+K G L+ A +F++ +N M+ G+ + G RE L
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH-----GLGREVL 340
Query: 269 GLF 271
LF
Sbjct: 341 ELF 343
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 226/738 (30%), Positives = 368/738 (49%), Gaps = 93/738 (12%)
Query: 97 HGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDG 156
H +L +G ++ LI YS A ++ + + S++S+I +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK-AKL 96
Query: 157 FREVFELLARMHRSGLDFSDYTLGSALKACC------VDKSLNCI-------------GK 197
F + + +RM GL + L + K C V K ++C+ G
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 198 MLHV---CAIKLDL--------NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----N 242
M H+ C D + ++V +ALL YA+ GCL + V + N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD---F 299
+N +++GF + GY +EA+ +F ++ LG + T SS++ + +GD
Sbjct: 217 IVSWNGILSGFNRS-----GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPS---VGDSEML 268
Query: 300 RAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS---------------- 343
GR IH + K+ L D+ V +++D Y G + I FN
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 344 -------------------TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
T +L+VVSWTS+IAGC +NGK AL L R+ +G KP+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
+ S++ C ++AA G G+A++ + + + V ++ I MYAK G I+ +++ F
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG 504
+ ++V W+ ++ + HG A E + IFE + + +KP+ I+ +L+AC GL DEG
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 505 LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACR 564
+YF++M ++YGI ++H +C+V+LLGRAG+L++A I + F D +W ALL +CR
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 565 VHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGI 624
+ + + + A+++ LEP +YVLL NIY G +R M+ G+KK PG
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 625 SWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK------IEFGDEKLPMDISGTE 678
SWI+V ++V+ L D+SHP I +++E+ ++ K ++F +
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQM 688
Query: 679 LNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRD 738
L G HSEKLAV FG+++ P P++VIKNLR+C DCH +K IS R+I +RD
Sbjct: 689 LWG------HSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRD 742
Query: 739 AIRFHHFKEGLCSCKDYW 756
RFHHFK+G+CSC D+W
Sbjct: 743 TNRFHHFKDGICSCGDFW 760
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 187/456 (41%), Gaps = 69/456 (15%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
GL + C ++G+ IH V+G+D FV S+ +MY +C R+ A
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 129 RVLFD--------TCD---------------------------ELDDVSWNSIIAGYVRL 153
R +FD TC E + VSWN I++G+ R
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
G +E + ++H G T+ S L + + LN +G+++H IK L +
Sbjct: 231 GY-HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN-MGRLIHGYVIKQGLLKDKC 288
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG---------------FLQRQT 258
V +A++DMY K+G + + +F F + N I G + QT
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 259 VSC---------------GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGR 303
+ G EAL LF EMQ+ G+ + T S++ AC I GR
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
H + +L + VG +L+D Y+ G I+ FN P ++V W S++ G +G
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISNFIIVQ 422
K + +S+ M + KPD +S++ C + G + + + ++GI +
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 423 NSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI 457
+ + + ++G + A +E+ PD W ++
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%)
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
Q HA+I K Q D ++ L+ YS + +D S P + S++S+I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
F ++ + + + G PD ++ ++ VCA+++A + G+QI + G+ VQ
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
S MY + G + AR F + + DVV+ S ++C A G E +RI M SGI+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 484 NHITLLGVLTACSHGGLVDEGLRYFE 509
N ++ G+L+ + G E + F+
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQ 241
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 42/275 (15%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+++ F++ G T + VL G + L +G IHG V+ G+ V++++I+
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 118 MYSKCKRIEAARVLFD--------TCD---------------------------ELDDVS 142
MY K + LF+ C+ EL+ VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 143 WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVC 202
W SIIAG + G E EL M +G+ + T+ S L AC +L G+ H
Sbjct: 356 WTSIIAGCAQNGKDI-EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGH-GRSTHGF 413
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
A+++ L N+ VG+AL+DMYAK G + + +VF N +N+++ GF G
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMH-----G 468
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIG 297
A+E + +F + L +F+S++ AC +G
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/687 (32%), Positives = 357/687 (51%), Gaps = 48/687 (6%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
F VL R LR +H +++ + + L+ Y+ K + +AR +FD
Sbjct: 43 FLLGQVLDTYPDIRTLR---TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
E + + N +I YV G + E ++ M + YT LKAC ++
Sbjct: 100 IPERNVIIINVMIRSYVNNG-FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI-V 157
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
IG+ +H A K+ L+S + VG L+ MY K G L++A LV + + +N+++ G+
Sbjct: 158 IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
Q Q +AL + EM+ + ++ T +S++ A + +N+
Sbjct: 218 QNQRFD-----DALEVCREMESVKISHDAGTMASLLPAV-------------SNTTTENV 259
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ D + G K +VSW MI ++N A+ L +
Sbjct: 260 M-------YVKDMFFKMG-------------KKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
A G +PD ++SV+ C D +A G++I G+ + + ++++N+ I MYAK G
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
++ AR F+ +++ DVVSW+ MI G +A+ +F + SG+ P+ I + L A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
CSH GL++EG F++M Y IT ++H C+VDLLGRAG++++A RFI D +
Sbjct: 420 CSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER 479
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
+W ALLGACRVH DT +G AD++ +L P + YVLL NIY AG+ + +R +M+
Sbjct: 480 VWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMK 539
Query: 615 DQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDI 674
+G+KK PG S +EV +H FLV DRSHP S IY L+ ++ K+ ++ + +
Sbjct: 540 SKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALH 599
Query: 675 SGTELNGIVGMSHHSEKLAVTFGIISLPKSAP-----VRVIKNLRVCSDCHVTMKLISKL 729
E + ++ HSEKLA+ F +++ + +R+ KNLR+C DCHV KLIS++
Sbjct: 600 DVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQI 659
Query: 730 EKRKIILRDAIRFHHFKEGLCSCKDYW 756
R+II+RD RFH F+ G+CSC DYW
Sbjct: 660 TSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 151/374 (40%), Gaps = 51/374 (13%)
Query: 41 LFDETPQRSIISCNSPASLLAFREARIAGLPV-----------SDFTFAGVLAYCGSTRN 89
+FDE P+R++I N G+ V +TF VL C +
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ +G IHGS G+ +FV N L++MY KC + AR++ D D VSWNS++ G
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y + F + E+ M + T+ S L A + N +
Sbjct: 216 YAQ-NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVM-------------- 260
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
+ DM+ K G LV +N MI +++ EA+
Sbjct: 261 -------YVKDMFFKMG---KKSLV----------SWNVMIGVYMKN-----AMPVEAVE 295
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
L+ M+ G + +S++ AC G++IH I +K L + + +L+D Y+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
G ++ F + DVVSWT+MI+ +G+ A++L + SG PD +
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 390 VMGVCADMAAARSG 403
+ C+ G
Sbjct: 416 TLAACSHAGLLEEG 429
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 232/738 (31%), Positives = 374/738 (50%), Gaps = 46/738 (6%)
Query: 53 CNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVM 112
CN ++L F +G+ +TF L+ C +R G IHG ++ G +FV
Sbjct: 115 CNE--AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQ 172
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHR-SG 171
NSL++ Y++C +++AR +FD E + VSW S+I GY R D ++ +L RM R
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEE 231
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ + T+ + AC + L G+ ++ + N ++ +AL+DMY K + A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLE-TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVK 291
+F+ + N + N M + ++++ G REALG+F M G+ + + S +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQ-----GLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQC---------DEFVGC-------------------- 322
+C + + G+ H + + + D ++ C
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 323 --SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-G 379
S+V Y G +D F + P+ ++VSW ++I+G V+ FE A+ + + G
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
D M S+ C + A + I + K GI + + + + M+++ GD +SA
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
F + N DV +W+ I A G A A+ +F+ M G+KP+ + +G LTACSHGG
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 500 LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRAL 559
LV +G F M K +G++ H C+VDLLGRAG LE+A + I D + V+W +L
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 560 LGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
L ACRV + M + A+++ L P SYVLL N+Y AG+ +VR M+++G++
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 620 KEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDE--KLPMDISGT 677
K PG S I++ K H F D SHP I + L+E+ + + + + + MD+
Sbjct: 706 KPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEK 765
Query: 678 ELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILR 737
E I +S HSEKLA+ +G+IS K +R++KNLRVCSDCH K SK+ R+IILR
Sbjct: 766 E--KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 738 DAIRFHHFKEGLCSCKDY 755
D RFH+ ++G CSC D+
Sbjct: 824 DNNRFHYIRQGKCSCGDF 841
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 149/322 (46%), Gaps = 14/322 (4%)
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC---LTDAVLVFE- 236
S+LK C L KM H K L++++ T L+ + G L+ A VFE
Sbjct: 37 SSLKNCKTIDEL----KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
S Y FMYN++I G+ S G EA+ LF M G++ K+TF + AC
Sbjct: 93 SESYGTCFMYNSLIRGY-----ASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
G QIH I K D FV SLV FY+ G +D + F+ + +VVSWTSMI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 357 AGCVENGKFETALSL-LRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
G + A+ L R P+ M V+ CA + +GE++ + GI
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
++ ++ + MY K ID A+ F E ++ + M G EAL +F L
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 476 MTVSGIKPNHITLLGVLTACSH 497
M SG++P+ I++L +++CS
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQ 349
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Query: 281 CSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG---SIDDG 337
C+K T SS+ K C I + + H + K+ L D LV G S+
Sbjct: 31 CTKATPSSL-KNCKTIDELK---MFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFA 86
Query: 338 IRCF-NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
F NS + S+I G +G A+ L + M SG PD++ + CA
Sbjct: 87 KEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK 146
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEM 456
A +G QI G +K G + + VQNS + YA+ G++DSAR F E+ +VVSW+ M
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 457 ICCNAHHGFANEALRI-FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDY 515
IC A FA +A+ + F ++ + PN +T++ V++AC+ ++ G + + + ++
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNS 265
Query: 516 GITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFAD 551
GI N + +VD+ + ++ AKR + G ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 359 bits (921), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 231/706 (32%), Positives = 355/706 (50%), Gaps = 40/706 (5%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGM--DGMIFVMNSLINMYSKCKRIEAARV 130
S +A + C RNL G +H +L + + N LINMY+KC I AR
Sbjct: 58 SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQ 117
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
+FDT E + VSW ++I GYV+ G+ +E F L + M +++TL S L +C +
Sbjct: 118 VFDTMPERNVVSWTALITGYVQAGNE-QEGFCLFSSMLSHCFP-NEFTLSSVLTSCRYEP 175
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKT---GCLTDAVLVFESFRYHNDFMYN 247
GK +H A+KL L+ ++ V A++ MY + +A VFE+ ++ N +N
Sbjct: 176 -----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWN 230
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGR---- 303
+MIA F C ++A+G+F M G+ + T +I + D
Sbjct: 231 SMIAAF-----QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKC 285
Query: 304 --QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSWTSMIA 357
Q+H+ K L V +L+ YS ++D C+ ++ D+V+W +I
Sbjct: 286 CLQLHSLTVKSGLVTQTEVATALIKVYSEM--LEDYTDCYKLFMEMSHCRDIVAWNGIIT 343
Query: 358 GCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISN 417
E A+ L Q PD + SSV+ CA + AR I +K G
Sbjct: 344 AFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLA 402
Query: 418 FIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT 477
++ NS I YAK G +D F ++++ DVVSW+ M+ + HG + L +F+ M
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM- 461
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
I P+ T + +L+ACSH G V+EGLR F M + + H C++D+L RA R
Sbjct: 462 --DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERF 519
Query: 538 EDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL-EPHAAASYVLLYNI 596
+A+ I D V+W ALLG+CR H +T +GK AD++ EL EP + SY+ + NI
Sbjct: 520 AEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNI 579
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
YN G A K M+ V+KEP +SW E+G+KVH F R P + +Y L+ +
Sbjct: 580 YNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRL 639
Query: 657 LVKINKIEFGDE-KLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAP-----VRVI 710
+ + ++ + E + E + HHSEKLA+ F ++ KS+ ++++
Sbjct: 640 ISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIM 699
Query: 711 KNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
KN R+C DCH MKL SKL ++I++RD+ RFHHFK+ CSC DYW
Sbjct: 700 KNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
F + R L +TF+ VL C R +IH V+ G + NSLI+ Y+K
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAK 416
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
C ++ +FD D D VSWNS++ Y G +V +L + ++ T +
Sbjct: 417 CGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG----QVDSILPVFQKMDINPDSATFIA 472
Query: 182 ALKAC 186
L AC
Sbjct: 473 LLSAC 477
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 358 bits (920), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 224/623 (35%), Positives = 324/623 (52%), Gaps = 50/623 (8%)
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDM---YAKTGCL 228
L+ + Y S L+ C + L K +H +K L + T L + L
Sbjct: 10 LEHNLYETMSCLQRCSKQEEL----KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFL 65
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE-ALGLFCEMQMLGLNCSKFTFS 287
A +VF+ F + F++N MI GF SC E +L L+ M + +TF
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGF------SCSDEPERSLLLYQRMLCSSAPHNAYTFP 119
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
S++KAC + F QIHAQI K + D + SL++ Y+ G+ F+ P+
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQF----------MASGR----------------- 380
D VSW S+I G V+ GK + AL+L R+ M SG
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 381 ----KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
+PD +++ + CA + A G+ I + K I ++ I MYAK G+++
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
A F+ I+ V +W+ +I A+HG EA+ F M GIKPN IT VLTACS
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 359
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
+ GLV+EG F M++DY + ++H CIVDLLGRAG L++AKRFI + + V+W
Sbjct: 360 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 419
Query: 557 RALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQ 616
ALL ACR+HK+ +G+ I + +I ++P+ YV NI+ K +A E R+LM++Q
Sbjct: 420 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 479
Query: 617 GVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGD--EKLPMD- 673
GV K PG S I + H FL DRSHP + I S+ M K+ + + E++ +D
Sbjct: 480 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 539
Query: 674 ISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRK 733
+ E IV HSEKLA+T+G+I +R++KNLRVC DCH KLISK+ KR
Sbjct: 540 VDDDEREAIV--HQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 597
Query: 734 IILRDAIRFHHFKEGLCSCKDYW 756
I++RD RFHHF++G CSC DYW
Sbjct: 598 IVMRDRTRFHHFRDGKCSCGDYW 620
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 155/335 (46%), Gaps = 40/335 (11%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
SLL ++ + P + +TF +L C + IH + G + ++ +NSLIN
Sbjct: 99 SLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLIN 158
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG----------------------- 154
Y+ + A +LFD E DDVSWNS+I GYV+ G
Sbjct: 159 SYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTM 218
Query: 155 -------DGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
D +E +L M S ++ + +L +AL AC +L GK +H K
Sbjct: 219 ISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE-QGKWIHSYLNKTR 277
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
+ + V+G L+DMYAK G + +A+ VF++ + + + +I+G+ G+ REA
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH-----GHGREA 332
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK-NLQCD-EFVGCSLV 325
+ F EMQ +G+ + TF++++ AC G G+ I + + NL+ E GC +V
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC-IV 391
Query: 326 DFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGC 359
D G +D+ R P K + V W +++ C
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 183/418 (43%), Gaps = 45/418 (10%)
Query: 81 LAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINM---YSKCKRIEAARVLFDTCDE 137
L C L+ IH +L TG+ + + ++ + + A+++FD D
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGK 197
D WN +I G+ + R + L RM S + YT S LKAC + +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLL-LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR- 256
+H KL +++ +L++ YA TG A L+F+ +D +N++I G+++
Sbjct: 137 -IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 257 --------------------QTVSCGYA-----REALGLFCEMQMLGLNCSKFTFSSIVK 291
T+ GY +EAL LF EMQ + + ++ +
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS 351
AC +G G+ IH+ + K ++ D +GC L+D Y+ G +++ + F + K V +
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 352 WTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI----- 406
WT++I+G +G A+S + G KP+ ++V+ C+ G+ I
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAH 462
+ + LK I ++ + + + ++G +D A+ QE+ P+ V W ++ C H
Sbjct: 376 RDYNLKPTIEHYGCI----VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 358 bits (920), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 210/613 (34%), Positives = 328/613 (53%), Gaps = 54/613 (8%)
Query: 185 ACCVDKSLNCIGKMLHVCAIKLDLNSNM-----VVGTALLDMYAKTGCLTDAVLVFESFR 239
A +DKS + ++L + A L N + V+ L YA G + ++ +F
Sbjct: 33 AVLIDKS-QSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 240 YHNDFMYNTMIAGFLQRQTVSC-GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
+ F++ I T S G +A L+ ++ +N ++FTFSS++K+C
Sbjct: 92 DPDLFLFTAAI------NTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST--- 142
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----------- 347
++G+ IH + K L D +V LVD Y+ G + + F+ P+
Sbjct: 143 -KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 348 --------------------DVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFI 386
D+VSW MI G ++G AL L ++ +A G+ KPDE
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
+ + + C+ + A +G I + I + V I MY+K G ++ A L F +
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
D+V+W+ MI A HG++ +ALR+F E+ ++G++P IT +G L AC+H GLV+EG+
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
R FE M ++YGI ++H C+V LLGRAG+L+ A I + D V+W ++LG+C++
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
H D ++GK IA+ +I L + YVLL NIY G + +VR LM+++G+ KEPGIS
Sbjct: 442 HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
Query: 626 WIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF--GDEKLPMDISGTELNGIV 683
IE+ +KVH F DR H S+ IY+ L ++ +I + + D+ TE
Sbjct: 502 TIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQ-- 559
Query: 684 GMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFH 743
+ HSE+LA+ +G+IS +P+++ KNLRVCSDCH KLISK+ RKI++RD RFH
Sbjct: 560 SLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 744 HFKEGLCSCKDYW 756
HF +G CSC D+W
Sbjct: 620 HFTDGSCSCGDFW 632
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 148/330 (44%), Gaps = 50/330 (15%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCK--------- 123
++FTF+ +L C + + G+ IH VL G+ +V L+++Y+K
Sbjct: 129 NEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 124 ----------------------RIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGF-REV 160
+EAAR LFD+ E D VSWN +I GY + GF +
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ--HGFPNDA 242
Query: 161 FELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALL 219
L ++ G D T+ +AL AC +L G+ +HV + N+ V T L+
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALET-GRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 220 DMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ-MLG 278
DMY+K G L +AVLVF + +N MIAG+ GY+++AL LF EMQ + G
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH-----GYSQDALRLFNEMQGITG 356
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK-NLQCD-EFVGCSLVDFYSFFGSIDD 336
L + TF ++AC G G +I + ++ ++ E GC LV G +
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC-LVSLLGRAGQLKR 415
Query: 337 GIRCF-NSTPKLDVVSWTSMIAGCVENGKF 365
N D V W+S++ C +G F
Sbjct: 416 AYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 149/405 (36%), Gaps = 68/405 (16%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSD-FTFAGVLAYCGSTR 88
LFD +R I+S N +L+ F++ G P D T L+ C
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L G IH V + + + V LI+MYSKC +E A ++F+ D V+WN++IA
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 149 GYVRLGDGFREVFELLARMHR-SGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
GY G ++ L M +GL +D T L+AC
Sbjct: 334 GYAMHGYS-QDALRLFNEMQGITGLQPTDITFIGTLQAC--------------------- 371
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
A G + + + +FES G L G + A
Sbjct: 372 ---------------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDF 327
M M + +SS++ +C GDF G++I + N++ + + L +
Sbjct: 417 YETIKNMNM---DADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK-NSGIYVLLSNI 472
Query: 328 YSFFGSIDDGIRCFN--------STPKLDVVSWTSMI----AGCVENGKFETALSLLRQF 375
Y+ G + + N P + + + + AG E+ K + ++LR+
Sbjct: 473 YASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
S R + + V D+ + +Q + + I+ +I
Sbjct: 533 --SERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 575
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 175/462 (37%), Positives = 281/462 (60%), Gaps = 1/462 (0%)
Query: 296 IGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSM 355
+ D R G IH+ + + +V SL+ Y+ G + + F+ P+ D+V+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
I G ENGK E AL+L + + G KPD F + S++ CA + A G+++ + +K G+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
+ + N + +YA+ G ++ A+ F E+ + + VSW+ +I A +GF EA+ +F+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 476 M-TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA 534
M + G+ P IT +G+L ACSH G+V EG YF M+++Y I ++H C+VDLL RA
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 535 GRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLY 594
G+++ A +I + V+WR LLGAC VH D+ + + ++++LEP+ + YVLL
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 595 NIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLE 654
N+Y + ++RK M GVKK PG S +EVG++VH FL+ D+SHP S IY++L+
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 655 EMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLR 714
EM ++ + + + + E + +HSEK+A+ F +IS P+ +P+ V+KNLR
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 715 VCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
VC+DCH+ +KL+SK+ R+I++RD RFHHFK G CSC+DYW
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 143/285 (50%), Gaps = 14/285 (4%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
++RLGE IH V+ +G +I+V NSL+++Y+ C + +A +FD E D V+WNS+I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G+ G E L M+ G+ +T+ S L AC +L +GK +HV IK+ L
Sbjct: 63 GFAENGKP-EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT-LGKRVHVYMIKVGL 120
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
N+ LLD+YA+ G + +A +F+ N + ++I G G+ +EA+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN-----GFGKEAI 175
Query: 269 GLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSL 324
LF M+ GL + TF I+ AC G + G + ++ ++ + + E GC +
Sbjct: 176 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGC-M 233
Query: 325 VDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETA 368
VD + G + S P + +VV W +++ C +G + A
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 10/294 (3%)
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
+G+ +H I+ S + V +LL +YA G + A VF+ + +N++I GF
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
+ G EAL L+ EM G+ FT S++ AC IG G+++H + K L
Sbjct: 66 EN-----GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ L+D Y+ G +++ F+ + VSWTS+I G NG + A+ L +
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 375 FMAS-GRKPDEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQICMYAKS 432
++ G P E ++ C+ + G E + ++ I I + + A++
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 433 GDIDSARLTFQEIE-NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
G + A + + P+VV W ++ HG ++ L F + + ++PNH
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNH 292
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 41 LFDETPQRSIISCNS----------PASLLA-FREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD+ P++ +++ NS P LA + E G+ FT +L+ C
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L LG+ +H ++ G+ + N L+++Y++C R+E A+ LFD + + VSW S+I G
Sbjct: 105 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 150 YVRLGDGFREVFELLARMHRS-GLDFSDYTLGSALKAC 186
G G +E EL M + GL + T L AC
Sbjct: 165 LAVNGFG-KEAIELFKYMESTEGLLPCEITFVGILYAC 201
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 236/757 (31%), Positives = 375/757 (49%), Gaps = 41/757 (5%)
Query: 22 LTLPFSNPVHSPIRTRTLHLFDETPQ----------RSIISCNSPASLLAFREARI-AGL 70
LT S + L LFDE + + SC + F + AG+
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 71 PVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARV 130
FT+ V+ +L G+ IH V+ G ++V NSLI++Y K A
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
+F+ E D VSWNS+I+GY+ LGDGF + L M + G ++ SAL AC
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLM-LFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 191 SLNCIGKMLHVCAIKLDLNS-NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
S +GK +H A++ + + +++V T++LDMY+K G ++ A +F N +N M
Sbjct: 246 SPK-MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 250 IAGFLQRQTVSCGYAREALGLFCEM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
I + + V+ +A F +M + GL T +++ A + GR IH
Sbjct: 305 IGCYARNGRVT-----DAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGY 355
Query: 309 ICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA 368
++ + +L+D Y G + F+ + +V+SW S+IA V+NGK +A
Sbjct: 356 AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 369 LSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICM 428
L L ++ S PD ++S++ A+ + G +I + +K + I+ NS + M
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475
Query: 429 YAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
YA GD++ AR F I DVVSW+ +I A HGF ++ +F M S + PN T
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSG 548
+L ACS G+VDEG YFE MK++YGI ++H C++DL+GR G AKRF+ +
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 549 FADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALE 608
F +W +LL A R HKD + + A+++ ++E YVLL N+Y +AG+ +
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 609 VRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDE 668
++ LM+ +G+ + S +E K H+F DRSH + IY E+L ++++ G+E
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY----EVLDVVSRM-VGEE 710
Query: 669 KL---------PMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDC 719
+ P + + N HS +LA FG+IS V V N R+C C
Sbjct: 711 DIYVHCVSRLRPETLVKSRSN---SPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKC 767
Query: 720 HVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
H ++ S+L +R+I++ D+ FHHF G CSC +YW
Sbjct: 768 HEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/629 (33%), Positives = 324/629 (51%), Gaps = 36/629 (5%)
Query: 157 FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGT 216
RE +LL R + T + ++ C ++L GK +H +V+
Sbjct: 70 LREAVQLLGRAKKPPAS----TYCNLIQVCSQTRALE-EGKKVHEHIRTSGFVPGIVIWN 124
Query: 217 ALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF----------------LQRQTVS 260
LL MYAK G L DA VF+ + +N M+ G+ ++ + S
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 261 -----CGYAR-----EALGLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
GY + EAL L+ MQ + + FT S V A A+ R G++IH I
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETAL 369
+ L DE + SL+D Y G ID+ F+ + DVVSWTSMI ++ ++
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY 429
SL + + S +P+E+ + V+ CAD+ G+Q+ G+ + G + +S + MY
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMY 364
Query: 430 AKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
K G+I+SA+ PD+VSW+ +I A +G +EAL+ F+L+ SG KP+H+T +
Sbjct: 365 TKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFV 424
Query: 490 GVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGF 549
VL+AC+H GLV++GL +F + + + ++ H TC+VDLL R+GR E K I +
Sbjct: 425 NVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
Query: 550 ADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEV 609
+W ++LG C + + + + A + ++EP +YV + NIY AGK + ++
Sbjct: 485 KPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKM 544
Query: 610 RKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF--GD 667
RK MQ+ GV K PG SW E+ K H+F+ D SHPM I L E+ K+ + +
Sbjct: 545 RKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPAT 604
Query: 668 EKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLIS 727
+ D+ + + +HSEKLAV F I+S + ++V KNLR C DCH +K IS
Sbjct: 605 SLVLHDVEDEQKEE--NLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFIS 662
Query: 728 KLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+ KRKI +RD+ RFH F+ G CSC DYW
Sbjct: 663 NITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 204/479 (42%), Gaps = 53/479 (11%)
Query: 65 ARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR 124
R P S T+ ++ C TR L G+ +H + +G I + N L+ MY+KC
Sbjct: 78 GRAKKPPAS--TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGS 135
Query: 125 I-------------------------------EAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ E AR LFD E D SW +++ GYV+
Sbjct: 136 LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK- 194
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI--GKMLHVCAIKLDLNSN 211
D E L + M R + S + + A ++ CI GK +H ++ L+S+
Sbjct: 195 KDQPEEALVLYSLMQR--VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 212 MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
V+ ++L+DMY K GC+ +A +F+ + + +MI + + RE LF
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR-----WREGFSLF 307
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
E+ +++TF+ ++ AC + G+Q+H + + F SLVD Y+
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G+I+ + PK D+VSWTS+I GC +NG+ + AL + SG KPD +V+
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 392 GVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPD 449
C G E K +S+ + + A+SG + + E+ P
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 450 VVSWSEMICCNAHHG---FANEALRIFELMTVSGIKP-NHITLLGVLTACSHGGLVDEG 504
W+ ++ + +G A EA + EL + P ++T+ + A G +EG
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQ--ELFKIEPENPVTYVTMANIYAAA--GKWEEEG 542
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/634 (33%), Positives = 334/634 (52%), Gaps = 16/634 (2%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD P++S ++ S SL F + + + + VL+ C
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G+ IH +L G++ +MN LI+ Y KC R+ AA LF+ + +SW ++++G
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y + +E EL M + GL Y S L +C +L G +H IK +L
Sbjct: 325 Y-KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG-FGTQVHAYTIKANLG 382
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
++ V +L+DMYAK CLTDA VF+ F + ++N MI G+ + T EAL
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ--WELHEALN 440
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
+F +M+ + S TF S+++A ++ +QIH + K L D F G +L+D YS
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
+ D F+ D+V W SM AG V+ + E AL+L + S +PDEF ++
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFAN 560
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD 449
++ ++A+ + G++ LK G+ + N+ + MYAK G + A F + D
Sbjct: 561 MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620
Query: 450 VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFE 509
VV W+ +I A+HG +AL++ E M GI+PN+IT +GVL+ACSH GLV++GL+ FE
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 510 IMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDT 569
+M + +GI +H C+V LLGRAGRL A+ I ++WR+LL C +
Sbjct: 681 LMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNV 739
Query: 570 MMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
+ +H A+ I +P + S+ +L NIY G A +VR+ M+ +GV KEPG SWI +
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGI 799
Query: 630 GSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKI 663
+VH+FL D+SH + IY L+++LV+I +
Sbjct: 800 NKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 234/492 (47%), Gaps = 15/492 (3%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD 136
FA +L S L +HG ++V G++ ++ N LIN+YS+ + AR +F+
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF-SDYTLGSALKACC-VDKSLNC 194
E + VSW+++++ G + E + R+ D ++Y L S ++AC +D
Sbjct: 107 ERNLVSWSTMVSACNHHGI-YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
+ L +K + ++ VGT L+D Y K G + A LVF++ + + TMI+G
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG-- 223
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
V G + +L LF ++ + + S+++ AC + G+QIHA I + L
Sbjct: 224 ---CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ D + L+D Y G + + FN P +++SWT++++G +N + A+ L
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
G KPD + SS++ CA + A G Q+ + +K + N V NS I MYAK
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFA---NEALRIFELMTVSGIKPNHITLLGV 491
+ AR F DVV ++ MI + G +EAL IF M I+P+ +T + +
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 492 LTACSHGGLVDEGL-RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFA 550
L A + L GL + + YG+ ++ + ++D+ L+D+ R + D
Sbjct: 461 LRASA--SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS-RLVFDEMKV 517
Query: 551 DDPVMWRALLGA 562
D V+W ++
Sbjct: 518 KDLVIWNSMFAG 529
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 351 bits (901), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 202/605 (33%), Positives = 326/605 (53%), Gaps = 47/605 (7%)
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTD--AVLVFESFRYHNDFMYNT 248
+LN I K +H ++ L+ + + T L+ K G D A V E ++ N F++
Sbjct: 61 NLNQI-KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTA 119
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
+I G+ G EA+ ++ M+ + FTFS+++KAC + D GRQ HAQ
Sbjct: 120 VIRGYAIE-----GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQ 174
Query: 309 ICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIA----------- 357
+ C +VG +++D Y SID + F+ P+ DV+SWT +IA
Sbjct: 175 TFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECA 234
Query: 358 --------------------GCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADM 397
G +N K + AL + SG + DE ++ + CA +
Sbjct: 235 AELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL 294
Query: 398 AAARSGEQIQGWALKFGIS--NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSE 455
A++ ++ A K G S + +++ ++ I MY+K G+++ A F + N +V ++S
Sbjct: 295 GASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSS 354
Query: 456 MICCNAHHGFANEALRIFELM-TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
MI A HG A EAL +F M T + IKPN +T +G L ACSH GLVD+G + F+ M +
Sbjct: 355 MILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQT 414
Query: 515 YGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKH 574
+G+ H TC+VDLLGR GRL++A I +W ALLGACR+H + + +
Sbjct: 415 FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEI 474
Query: 575 IADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW-IEVGSKV 633
A+ + ELEP +Y+LL N+Y AG L VRKL++++G+KK P +SW ++ ++
Sbjct: 475 AAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQM 534
Query: 634 HMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDE--KLPMDISGTELNGIVGMSHHSEK 691
H F + +HPMS I +LEE++ ++ + + + +P D+S I + H+EK
Sbjct: 535 HKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLI--LIQHTEK 592
Query: 692 LAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCS 751
LA+ F +++ + + + ++KNLR+C DCH M+L S++ + II+RD +RFHHF+ G CS
Sbjct: 593 LALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCS 652
Query: 752 CKDYW 756
C D+W
Sbjct: 653 CGDFW 657
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 208/517 (40%), Gaps = 104/517 (20%)
Query: 25 PFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYC 84
P++ V P++ R L+ + I ++ + R + FTF+ +L C
Sbjct: 100 PYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC 159
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G+ ++L LG H ++V N++I+MY KC+ I+ AR +FD E D +SW
Sbjct: 160 GTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWT 219
Query: 145 SIIAGYVRLGD------------------------GF------REVFELLARMHRSGLDF 174
+IA Y R+G+ GF +E E RM +SG+
Sbjct: 220 ELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIK-LDLNSNMVVGTALLDMYAKTGCLTDAVL 233
+ T+ + AC + + + + + ++V+G+AL+DMY+K G + +AV
Sbjct: 280 DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 339
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM-QMLGLNCSKFTFSSIVKA 292
VF S N F Y++MI G + G A+EAL LF M + + TF + A
Sbjct: 340 VFMSMNNKNVFTYSSMILGL-----ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
C G GRQ+ D + F P D +
Sbjct: 395 CSHSGLVDQGRQV----------------------------FDSMYQTFGVQPTRD--HY 424
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC--------ADMAAARSGE 404
T M+ G+ + AL L++ +P + +++G C A++AA E
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSV---EPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 405 QIQGWALKFGISNFIIVQNSQICMYAKSGD---IDSARLTFQE--IENPDVVSW------ 453
I N+I++ N +YA +GD + R +E ++ VSW
Sbjct: 482 LEPDI-----IGNYILLSN----VYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNG 532
Query: 454 --SEMICCNAHHGFANEAL----RIFELMTVSGIKPN 484
+ N +H +N+ + E +TV G +P+
Sbjct: 533 QMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPD 569
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 146/351 (41%), Gaps = 37/351 (10%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK--CKRIEAARVLFDTCDELDDVSWNSI 146
NL + IHG VL G+D +++ LI +K AR + + + W ++
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
I GY G F E + M + + +T + LKAC K LN +G+ H +L
Sbjct: 121 IRGYAIEGK-FDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN-LGRQFHAQTFRL 178
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC----- 261
+ VG ++DMY K + A VF+ + + +IA + + + C
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 262 ----------------GYA-----REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
G+A +EAL F M+ G+ + T + + AC +G +
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 301 -AGRQIHAQICKKNLQCDE---FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
A R + QI +K+ +G +L+D YS G++++ + F S +V +++SMI
Sbjct: 299 YADRAV--QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 357 AGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQI 406
G +G+ + AL L + KP+ + C+ G Q+
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/612 (31%), Positives = 333/612 (54%), Gaps = 17/612 (2%)
Query: 153 LGDGFREVFELLARMH-RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSN 211
L + FRE FEL + R T + ++AC KS+ C+ K ++ +
Sbjct: 99 LCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCV-KRVYGFMMSNGFEPE 157
Query: 212 MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
+ +L M+ K G + DA +F+ N + Y ++I+GF V+ G EA LF
Sbjct: 158 QYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF-----VNFGNYVEAFELF 212
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
M +C TF+ +++A +G G+Q+H K + + FV C L+D YS
Sbjct: 213 KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKC 272
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G I+D F P+ V+W ++IAG +G E AL LL SG D+F +S ++
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVV 451
+ +A +Q ++ G + I+ + + Y+K G +D+AR F ++ +++
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 452 SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM 511
SW+ ++ A+HG +A+++FE M + + PNH+T L VL+AC++ GL ++G F M
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 512 KKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMM 571
+ +GI H C+++LLGR G L++A FI + MW ALL ACR+ ++ +
Sbjct: 453 SEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLEL 512
Query: 572 GKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGS 631
G+ +A+++ + P +YV++YN+YN GK A V + ++ +G+ P +W+EVG
Sbjct: 513 GRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGD 572
Query: 632 KVHMFLVDDR----SHPMSQLIYSRLEEMLVKINKIEFGDEK---LPMDISGTELNGIVG 684
+ H FL DR + + + IY +++E++ +I++ + +E+ LP D+ E +
Sbjct: 573 QTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLP-DVDEKEEERV-- 629
Query: 685 MSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHH 744
+HSEKLA+ +G+++ P+ P+++ +N R+C +CH ++ IS + R++++RDA RFHH
Sbjct: 630 GRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHH 689
Query: 745 FKEGLCSCKDYW 756
FKEG CSC YW
Sbjct: 690 FKEGKCSCGGYW 701
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 172/341 (50%), Gaps = 12/341 (3%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
T+ ++ C +++R + ++G ++ G + ++MN ++ M+ KC I AR LFD
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
E + S+ SII+G+V G+ + E FEL M D +T L+A S+ +
Sbjct: 185 PERNLYSYYSIISGFVNFGN-YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIY-V 242
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
GK LHVCA+KL + N V L+DMY+K G + DA FE +N +IAG+
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
GY+ EAL L +M+ G++ +FT S +++ + +Q HA + + +
Sbjct: 303 H-----GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE 357
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
+ +LVDFYS +G +D F+ P+ +++SW +++ G +G+ A+ L +
Sbjct: 358 SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
+A+ P+ +V+ C A SG QGW + +S
Sbjct: 418 IAANVAPNHVTFLAVLSAC-----AYSGLSEQGWEIFLSMS 453
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 146/332 (43%), Gaps = 20/332 (6%)
Query: 41 LFDETPQRSIISCNSPAS--------LLAFREARIAGLPVSD---FTFAGVLAYCGSTRN 89
LFDE P+R++ S S S + AF ++ +SD TFA +L +
Sbjct: 180 LFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGS 239
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ +G+ +H L G+ FV LI+MYSKC IE AR F+ E V+WN++IAG
Sbjct: 240 IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y G E LL M SG+ +TL ++ L + K H I+
Sbjct: 300 YALHGYS-EEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE-LTKQAHASLIRNGFE 357
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
S +V TAL+D Y+K G + A VF+ N +N ++ G+ G +A+
Sbjct: 358 SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH-----GRGTDAVK 412
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICK-KNLQCDEFVGCSLVDFY 328
LF +M + + TF +++ AC G G +I + + ++ +++
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL 472
Query: 329 SFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGC 359
G +D+ I P K V W +++ C
Sbjct: 473 GRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC 504
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/610 (32%), Positives = 321/610 (52%), Gaps = 43/610 (7%)
Query: 183 LKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHN 242
L+ C +++L K LH +KL + + L+++Y K G + A+ VF+ + +
Sbjct: 10 LQLCARNRTLT-TAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+ +++ Q + GL F FS++VKAC +G G
Sbjct: 69 HIAWASVLTALNQANLS----GKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
RQ+H DE V SLVD Y+ G ++ F+S + +SWT+M++G ++
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 363 GKFETALSLLR---------------QFMASGRKPDEF-----------------IMSSV 390
G+ E AL L R F+ SG+ + F ++SS+
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
+G CA++AA+ +G Q+ G + G + + + N+ I MYAK D+ +A+ F + + DV
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEI 510
VSW+ +I A HG A +AL +++ M G+KPN +T +G++ ACSH G V++G F+
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 511 MKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTM 570
M KDYGI +++H TC++DLLGR+G L++A+ I F D W ALL AC+
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 571 MGKHIADRVI-ELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
MG IAD ++ + ++Y+LL NIY A + E R+ + + V+K+PG S +EV
Sbjct: 425 MGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 484
Query: 630 GSKVHMFLVDDRSHPMSQLIY---SRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMS 686
+ +F + SHP+ + I+ +LEE + N + D+ E + +
Sbjct: 485 RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL--LF 542
Query: 687 HHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFK 746
HSE+ AV +G++ P+R++KNLRVC DCHV +K IS++ +R+II+RDA R+HHFK
Sbjct: 543 WHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFK 602
Query: 747 EGLCSCKDYW 756
G CSC D+W
Sbjct: 603 GGKCSCNDFW 612
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 200/471 (42%), Gaps = 37/471 (7%)
Query: 81 LAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDD 140
L C R L +A+H ++ G+ + N+L+N+Y KC A +FD D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH 200
++W S++ + + + + SGL D+ + +KAC S++ G+ +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH-GRQVH 128
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT-- 258
I + ++ VV ++L+DMYAK G L A VF+S R N + M++G+ +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 259 ------------------------VSCGYAREALGLFCEMQMLGLNC-SKFTFSSIVKAC 293
V G EA +F EM+ ++ SSIV AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
+ AGRQ+H + F+ +L+D Y+ + F+ DVVSWT
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-QGWALK 412
S+I G ++G+ E AL+L ++ G KP+E ++ C+ + G ++ Q
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICCNAHHGFANEALR 471
+GI + + + +SG +D A + PD +W+ ++ G +R
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 472 IFELMTVSGIK----PNHITLLGVLTACSHGGLVDEGLRYFEIM--KKDYG 516
I + + VS K +I L + + S G V E R M +KD G
Sbjct: 429 IADHL-VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPG 478
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 182/414 (43%), Gaps = 63/414 (15%)
Query: 36 TRTLHLFDETPQRSIISCNSPASLLAFREARIAG--------------LPVSDFTFAGVL 81
+ L +FDE P R I+ S L A +A ++G L DF F+ ++
Sbjct: 55 SHALQVFDEMPHRDHIAWAS--VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALV 112
Query: 82 AYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDV 141
C + ++ G +H +V+ V +SL++MY+KC + +A+ +FD+ + +
Sbjct: 113 KACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTI 172
Query: 142 SWNSIIAGYVRLG------DGFR------------------------EVFELLARMHRSG 171
SW ++++GY + G + FR E F + M R
Sbjct: 173 SWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+D D + S++ C + + + G+ +H I L +S + + AL+DMYAK + A
Sbjct: 233 VDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 292
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVK 291
+F R+ + + ++I G Q G A +AL L+ +M G+ ++ TF ++
Sbjct: 293 KDIFSRMRHRDVVSWTSLIVGMAQH-----GQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 292 ACVAIGDFRAGRQIHAQICK-----KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP- 345
AC +G GR++ + K +LQ C L+D G +D+ ++ P
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQ---HYTC-LLDLLGRSGLLDEAENLIHTMPF 403
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASG--RKPDEFIMSSVMGVCADM 397
D +W ++++ C G+ + + + ++S + P +I+ S + A +
Sbjct: 404 PPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 318/600 (53%), Gaps = 46/600 (7%)
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
G LH A K+ + V T +DMYA G + A VF+ + + +NTMI + +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
G EA LF EM+ + + +IV AC G+ R R I+ + + +++
Sbjct: 190 -----FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 316 CDE-------------------------------FVGCSLVDFYSFFGSIDDGIRCFNST 344
D FV ++V YS G +DD F+ T
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
K D+V WT+MI+ VE+ + AL + + SG KPD M SV+ CA++ +
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 405 QIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHG 464
+ G+ + + + N+ I MYAK G +D+ R F+++ +VVSWS MI + HG
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
A++AL +F M ++PN +T +GVL CSH GLV+EG + F M +Y IT ++H
Sbjct: 425 EASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY 484
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEP 584
C+VDL GRA L +A I A + V+W +L+ ACR+H + +GK A R++ELEP
Sbjct: 485 GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEP 544
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHP 644
+ VL+ NIY + + +R++M+++ V KE G+S I+ K H FL+ D+ H
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHK 604
Query: 645 MSQLIYSRLEEMLVKINKIEFGDE--KLPMDISGTELNGIVGMSHHSEKLAVTFGIISLP 702
S IY++L+E++ K+ + + + +D+ E +V HSEKLA+ FG+++
Sbjct: 605 QSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLW--HSEKLALCFGLMNEE 662
Query: 703 KSAP------VRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K +R++KNLRVC DCH+ KL+SK+ +R+II+RD RFH +K GLCSC+DYW
Sbjct: 663 KEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 195/470 (41%), Gaps = 48/470 (10%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
S A++L ++ R G + F+F +L L G +HG FV
Sbjct: 89 SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV 148
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
++MY+ C RI AR +FD D V+WN++I Y R G E F+L M S
Sbjct: 149 ETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG-LVDEAFKLFEEMKDSN 207
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ + L + + AC ++ + ++ I+ D+ + + TAL+ MYA GC+ A
Sbjct: 208 VMPDEMILCNIVSACGRTGNMR-YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 232 VLVFESFRYHNDFMYNTMIAGF---------------LQRQTVSC-----------GYAR 265
F N F+ M++G+ +++ + C Y +
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
EAL +F EM G+ + S++ AC +G + +H+ I L+ + + +L+
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALI 386
Query: 326 DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEF 385
+ Y+ G +D F P+ +VVSW+SMI +G+ ALSL + +P+E
Sbjct: 387 NMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 386 IMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI 445
V+ C+ G++I +A N CM G + R + I
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKI--FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 446 EN----PDVVSWSEMICCNAHHG------FANEALRIFELMTVSGIKPNH 485
E+ +VV W ++ HG FA A RI EL +P+H
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFA--AKRILEL------EPDH 546
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 157/364 (43%), Gaps = 37/364 (10%)
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
R + + ++ +G +F+F I+KA + G ++H K CD FV
Sbjct: 93 RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGF 152
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
+D Y+ G I+ F+ DVV+W +MI G + A L + S PDE
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE 212
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWAL--------------------------------K 412
I+ +++ C R I + + K
Sbjct: 213 MILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRK 272
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
+ N + V + + Y+K G +D A++ F + E D+V W+ MI + EALR+
Sbjct: 273 MSVRN-LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
FE M SGIKP+ +++ V++AC++ G++D+ ++ G+ + + + ++++
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYA 390
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE--LEPHAAASY 590
+ G L DA R + + + V W +++ A +H + + R+ + +EP+
Sbjct: 391 KCGGL-DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 591 VLLY 594
+LY
Sbjct: 450 GVLY 453
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 41 LFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD+T ++ ++ + S L F E +G+ + V++ C +
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L + +H + V G++ + + N+LINMY+KC ++A R +F+ + VSW+S+I
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
G+ + L ARM + ++ ++ T L C + K+ + ++
Sbjct: 420 LSMHGEA-SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFES 237
+ ++D++ + L +A+ V ES
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIES 506
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 333/632 (52%), Gaps = 20/632 (3%)
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
D+ D SWNS+IA R GD E + M + L + + A+KAC SL I
Sbjct: 37 DKTDVFSWNSVIADLARSGDS-AEALLAFSSMRKLSLYPTRSSFPCAIKAC---SSLFDI 92
Query: 196 --GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
GK H A S++ V +AL+ MY+ G L DA VF+ N + +MI G+
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 254 LQRQTVSCGYAREALGLFCEMQML------GLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
G A +A+ LF ++ + + S++ AC + IH+
Sbjct: 153 DLN-----GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGS--IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
+ K+ VG +L+D Y+ G + + F+ D VS+ S+++ ++G
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 366 ETALSLLRQFMASGRKP-DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNS 424
A + R+ + + + +S+V+ + A R G+ I ++ G+ + +IV S
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 425 QICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPN 484
I MY K G +++AR F ++N +V SW+ MI HG A +AL +F M SG++PN
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI 544
+IT + VL ACSH GL EG R+F MK +G+ ++H C+VDLLGRAG L+ A I
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 545 LDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEK 604
D ++W +LL ACR+HK+ + + R+ EL+ Y+LL +IY DAG+ K
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 605 RALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIE 664
VR +M+++G+ K PG S +E+ +VH+FL+ D HP + IY L E+ K+ +
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Query: 665 FGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMK 724
+ + E + + HSEKLA+ FGI++ + V V+KNLRVCSDCH +K
Sbjct: 568 YVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIK 627
Query: 725 LISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
LISK+ R+ ++RDA RFHHFK+G CSC DYW
Sbjct: 628 LISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 202/444 (45%), Gaps = 32/444 (7%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
S +S +LLAF R L + +F + C S ++ G+ H V G IFV
Sbjct: 54 SGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFV 113
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREV--FELLARMHR 169
++LI MYS C ++E AR +FD + + VSW S+I GY G+ V F+ L
Sbjct: 114 SSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173
Query: 170 SGLD--FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK--T 225
D F D ++ + C + + +H IK + + VG LLD YAK
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233
Query: 226 GCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM---QMLGLNCS 282
G + A +F+ + YN++++ + Q G + EA +F + +++ N
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-----SGMSNEAFEVFRRLVKNKVVTFNA- 287
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFN 342
T S+++ A G R G+ IH Q+ + L+ D VG S++D Y G ++ + F+
Sbjct: 288 -ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARS 402
+V SWT+MIAG +G AL L + SG +P+ SV+ C + +
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC-----SHA 401
Query: 403 GEQIQGW----ALK--FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSE 455
G ++GW A+K FG+ + + + ++G + A Q ++ PD + WS
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461
Query: 456 MI-CCNAHHGFANEAL---RIFEL 475
++ C H + R+FEL
Sbjct: 462 LLAACRIHKNVELAEISVARLFEL 485
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 170/360 (47%), Gaps = 34/360 (9%)
Query: 41 LFDETPQRSIISC-----------NSPASLLAFREARIAGLPVSDFTF------AGVLAY 83
+FDE P+R+I+S N+ ++ F++ + D F V++
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA 192
Query: 84 CGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR--IEAARVLFDTCDELDDV 141
C L E+IH V+ G D + V N+L++ Y+K + AR +FD + D V
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSG-LDFSDYTLGSALKACCVDKSLNCIGKMLH 200
S+NSI++ Y + G E FE+ R+ ++ + F+ TL + L A +L IGK +H
Sbjct: 253 SYNSIMSVYAQSGMS-NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR-IGKCIH 310
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS 260
I++ L +++VGT+++DMY K G + A F+ + N + MIAG+
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH---- 366
Query: 261 CGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG-RQIHAQICKKNLQCD-E 318
G+A +AL LF M G+ + TF S++ AC G G R +A + ++ E
Sbjct: 367 -GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 319 FVGC--SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA-LSLLRQF 375
GC L+ F D I+ P D + W+S++A C + E A +S+ R F
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMKMKP--DSIIWSSLLAACRIHKNVELAEISVARLF 483
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/631 (32%), Positives = 331/631 (52%), Gaps = 24/631 (3%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD P+R+++S S ++ + + L F F ++ C S+ +
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD 183
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ LG+ +H V+ + N+LI MY + ++ A +F D +SW+SIIAG
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAG 243
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
+ +LG F + L + ++Y GS+LKAC + G +H IK +L
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD-YGSQIHGLCIKSELA 302
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
N + G +L DMYA+ G L A VF+ + +N +IAG GYA EA+
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN-----GYADEAVS 357
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
+F +M+ G + S++ A G QIH+ I K D V SL+ Y+
Sbjct: 358 VFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYT 417
Query: 330 FFGSIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEF 385
F D CFN D VSW +++ C+++ + L L + + S +PD
Sbjct: 418 F---CSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 386 IMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI 445
M +++ C ++++ + G Q+ ++LK G++ ++N I MYAK G + AR F +
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 446 ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
+N DVVSWS +I A GF EAL +F+ M +GI+PNH+T +GVLTACSH GLV+EGL
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
+ + M+ ++GI+ +H +C+VDLL RAGRL +A+RFI + D V+W+ LL AC+
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
+ + + A+ +++++P + ++VLL +++ +G + A +R M+ VKK PG S
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Query: 626 WIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
WIE+ K+H+F +D HP IY+ L +
Sbjct: 715 WIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 234/487 (48%), Gaps = 11/487 (2%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
T+ ++ C S+R+L G IH +L + + N +++MY KC + AR +FD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
E + VS+ S+I GY + G G E L +M + L + GS +KAC + +
Sbjct: 129 PERNLVSYTSVITGYSQNGQG-AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVG-L 186
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
GK LH IKL+ +S+++ AL+ MY + ++DA VF + ++++IAGF Q
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 256 RQTVSCGYAREALGLFCEMQMLGL-NCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
G+ EAL EM G+ + +++ F S +KAC ++ G QIH K L
Sbjct: 247 -----LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL 301
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
+ GCSL D Y+ G ++ R F+ + D SW +IAG NG + A+S+ Q
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQ 361
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
+SG PD + S++ A G QI + +K+G + V NS + MY D
Sbjct: 362 MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD 421
Query: 435 IDSARLTFQEI-ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLT 493
+ F++ N D VSW+ ++ H E LR+F+LM VS +P+HIT+ +L
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
C + G + K G+ ++D+ + G L A+R I DS D
Sbjct: 482 GCVEISSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARR-IFDSMDNRDV 539
Query: 554 VMWRALL 560
V W L+
Sbjct: 540 VSWSTLI 546
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 298/542 (54%), Gaps = 21/542 (3%)
Query: 231 AVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNC-SKFTFSSI 289
A VF+S H+ FM+NT+I EA L+ +M G + K TF +
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAH----DVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV 349
+KAC I F G+Q+H QI K D +V L+ Y G +D + F+ P+ +
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
VSW SMI V G++++AL L R+ M +PD + M SV+ CA + + G +
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 410 ALK---FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFA 466
L+ ++ ++V+NS I MY K G + A FQ ++ D+ SW+ MI A HG A
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Query: 467 NEALRIFELMT--VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
EA+ F+ M ++PN +T +G+L AC+H G V++G +YF++M +DY I ++H
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC-RVHKDTMMGKHIADRVIELE 583
CIVDL+ RAG + +A ++ D V+WR+LL AC + + + IA +I +
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTK 456
Query: 584 P-------HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMF 636
+ + +YVLL +Y A + VRKLM + G++KEPG S IE+ H F
Sbjct: 457 EDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEF 516
Query: 637 LVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNGIVGMSHHSEKLAV 694
D SHP ++ IY +L+ + ++ I + ++ P+ + + + + HSE+LA+
Sbjct: 517 FAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAI 576
Query: 695 TFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKD 754
FG+I+LP P+R+ KNLRVC+DCH KLISK+ +II+RD +RFHHFK+G CSC D
Sbjct: 577 AFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLD 636
Query: 755 YW 756
YW
Sbjct: 637 YW 638
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 17/296 (5%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
TF VL C G+ +H ++ G G ++V N LI++Y C ++ AR +FD
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
E VSWNS+I VR G+ + +L M RS + YT+ S L AC SL+ +
Sbjct: 213 PERSLVSWNSMIDALVRFGE-YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLS-L 269
Query: 196 GKMLHVCAIK---LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG 252
G H ++ +D+ +++V +L++MY K G L A VF+ + + +N MI G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 253 FLQRQTVSCGYAREALGLFCEM--QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
F + G A EA+ F M + + + TF ++ AC G GRQ +
Sbjct: 330 F-----ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 384
Query: 311 KKNL--QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENG 363
+ E GC +VD + G I + I S P K D V W S++ C + G
Sbjct: 385 RDYCIEPALEHYGC-IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 148/365 (40%), Gaps = 25/365 (6%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMH 168
+F+ ++ + S + A +FD+ + WN++I E F L +M
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 169 RSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
G D +T LKAC + GK +H +K ++ V L+ +Y GC
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFS-EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFS 287
L A VF+ + +N+MI V G AL LF EMQ +T
Sbjct: 202 LDLARKVFDEMPERSLVSWNSMIDAL-----VRFGEYDSALQLFREMQR-SFEPDGYTMQ 255
Query: 288 SIVKACVAIGDFRAGRQIHA---QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST 344
S++ AC +G G HA + C ++ D V SL++ Y GS+ + F
Sbjct: 256 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 315
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR--KPDEFIMSSVMGVCADMAAARS 402
K D+ SW +MI G +G+ E A++ + + +P+ ++ C
Sbjct: 316 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 375
Query: 403 GEQ-----IQGWALKFGISNFIIVQNSQICMYAKSGDIDSA-RLTFQEIENPDVVSWSEM 456
G Q ++ + ++ + ++ + + + A++G I A + PD V W +
Sbjct: 376 GRQYFDMMVRDYCIEPALEHYGCI----VDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 457 I--CC 459
+ CC
Sbjct: 432 LDACC 436
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P+RS++S NS ++L FRE + + P +T VL+ C +
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYTMQSVLSACAGLGS 266
Query: 90 LRLGEAIHGSVLV-----TGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
L LG H +L MD + V NSLI MY KC + A +F + D SWN
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMD--VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 145 SIIAGYVRLGDGFREVFELLARM--HRSGLDFSDYTLGSALKAC----CVDKSLNCIGKM 198
++I G+ G E RM R + + T L AC V+K M
Sbjct: 325 AMILGFATHGRA-EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
+ I+ L ++D+ A+ G +T+A+
Sbjct: 384 VRDYCIEPALEHY----GCIVDLIARAGYITEAI 413
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 196/540 (36%), Positives = 294/540 (54%), Gaps = 18/540 (3%)
Query: 225 TGCLTDAVLVFESFRYHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSK 283
TG L+ A L+F+ F +N +I GF + ++ + M + ++
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSS-----PLNSILFYNRMLLSSVSRPD 106
Query: 284 -FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFN 342
FTF+ +K+C I +IH + + D V SLV YS GS++ + F+
Sbjct: 107 LFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFD 166
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARS 402
P D+VSW MI G ALS+ ++ G D + + +++ CA ++A
Sbjct: 167 EMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNM 226
Query: 403 GEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAH 462
G + A + + V N+ I MYAK G +++A F + DV++W+ MI
Sbjct: 227 GVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 463 HGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVK 522
HG EA+ F M SG++PN IT LG+L CSH GLV EG+ +FEIM + +T NVK
Sbjct: 287 HGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVK 346
Query: 523 HSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL 582
H C+VDL GRAG+LE++ I S +DPV+WR LLG+C++H++ +G+ ++++L
Sbjct: 347 HYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
Query: 583 EPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRS 642
E A YVL+ +IY+ A + +RKL++ ++ PG SWIE+G +VH F+VDD+
Sbjct: 407 EAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKM 466
Query: 643 HPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELN------GIVGMSHHSEKLAVTF 696
HP S +IYS L E+ IN+ K P D + T G S HSEKLA+ +
Sbjct: 467 HPESAVIYSELGEV---INRAILAGYK-PEDSNRTAPTLSDRCLGSADTS-HSEKLAIAY 521
Query: 697 GIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
G++ +R+ KNLRVC DCH K +SK R+II+RD +RFHHF +G+CSC DYW
Sbjct: 522 GLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 167/381 (43%), Gaps = 25/381 (6%)
Query: 42 FDETPQ--------RSIISCNSP-ASLLAFREARIAGLPVSD-FTFAGVLAYCGSTRNLR 91
FD P R + +SP S+L + ++ + D FTF L C +++
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 92 LGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYV 151
IHGSV+ +G V SL+ YS +E A +FD D VSWN +I +
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 152 RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSN 211
+G + + RM G+ YTL + L +C +LN +G MLH A + S
Sbjct: 185 HVGL-HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALN-MGVMLHRIACDIRCESC 242
Query: 212 MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
+ V AL+DMYAK G L +A+ VF R + +N+MI G+ G+ EA+ F
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH-----GHGVEAISFF 297
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV---GCSLVDFY 328
+M G+ + TF ++ C G + G + H +I V GC +VD Y
Sbjct: 298 RKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGC-MVDLY 355
Query: 329 SFFGSIDDGIR-CFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF--MASGRKPDEF 385
G +++ + + S+ D V W +++ C + E +++ + + D
Sbjct: 356 GRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYV 415
Query: 386 IMSSVMGVCADMAAARSGEQI 406
+M+S+ D A S ++
Sbjct: 416 LMTSIYSAANDAQAFASMRKL 436
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P R ++S N +L ++ G+ +T +L+ C
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L +G +H + +FV N+LI+MY+KC +E A +F+ + D ++WNS+I G
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y G G E +M SG+ + T L C + + + + + L
Sbjct: 284 YGVHGHGV-EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLT 342
Query: 210 SNMVVGTALLDMYAKTGCLTDAV-LVFESFRYHNDFMYNTMIA 251
N+ ++D+Y + G L +++ +++ S + + ++ T++
Sbjct: 343 PNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 343 bits (880), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 330/646 (51%), Gaps = 26/646 (4%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGL 172
N L++ Y K + I AR +F+ E + VSW +++ GY++ G E L RM
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG-MVGEAESLFWRMPERNE 141
Query: 173 DFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
G + +DK+ K+ + +K ++V T ++ + G + +A
Sbjct: 142 VSWTVMFGGLIDDGRIDKAR----KLYDMMPVK-----DVVASTNMIGGLCREGRVDEAR 192
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
L+F+ R N + TMI G+ Q V AR+ + E ++ +++S++
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDV--ARKLFEVMPEK-------TEVSWTSML-- 241
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGC-SLVDFYSFFGSIDDGIRCFNSTPKLDVVS 351
+G +GR A+ + + + C +++ + G I R F+ D +
Sbjct: 242 ---LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT 298
Query: 352 WTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWAL 411
W MI G AL L Q G +P + S++ VCA +A+ + G Q+ +
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 412 KFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALR 471
+ + + V + + MY K G++ A+L F + D++ W+ +I A HG EAL+
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
IF M SG PN +TL+ +LTACS+ G ++EGL FE M+ + +T V+H +C VD+L
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 532 GRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYV 591
GRAG+++ A I D +W ALLGAC+ H + + A ++ E EP A +YV
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYV 538
Query: 592 LLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDD-RSHPMSQLIY 650
LL +I K VRK M+ V K PG SWIEVG KVHMF ++HP +I
Sbjct: 539 LLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMIL 598
Query: 651 SRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVI 710
LE+ + + + + + E + +S HSE+LAV +G++ LP+ P+RV+
Sbjct: 599 MMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVM 658
Query: 711 KNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
KNLRVC DCH +KLISK+ +R+IILRDA RFHHF G CSC+DYW
Sbjct: 659 KNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 177/452 (39%), Gaps = 66/452 (14%)
Query: 116 INMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGF-REVFELLARMHRSGLDF 174
I+ S+ +I AR FD+ SWNSI++GY +G +E +L M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGY--FSNGLPKEARQLFDEMS------ 75
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
N+V L+ Y K + +A V
Sbjct: 76 ----------------------------------ERNVVSWNGLVSGYIKNRMIVEARNV 101
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
FE N + M+ G++Q G EA LF M ++ +++ + +
Sbjct: 102 FELMPERNVVSWTAMVKGYMQE-----GMVGEAESLFWRMP----ERNEVSWTVMFGGLI 152
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
G R+++ + K D +++ G +D+ F+ + +VV+WT+
Sbjct: 153 DDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTT 208
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG 414
MI G +N + + A L F K + S ++G + E + +K
Sbjct: 209 MITGYRQNNRVDVARKL---FEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK-- 263
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFE 474
+I N+ I + + G+I AR F +E+ D +W MI GF EAL +F
Sbjct: 264 ---PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA 534
M G++P+ +L+ +L+ C+ + G + + + +V ++ ++ + +
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKC 379
Query: 535 GRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
G L AK + D + D +MW +++ H
Sbjct: 380 GELVKAK-LVFDRFSSKDIIMWNSIISGYASH 410
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
F + + G+ S + +L+ C + +L+ G +H ++ D ++V + L+ MY K
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVK 378
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
C + A+++FD D + WNSII+GY G G E ++ M SG + TL +
Sbjct: 379 CGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG-EEALKIFHEMPSSGTMPNKVTLIA 437
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
L AC L ++ K + + + +DM + G + A+ + ES
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
Query: 242 ND 243
D
Sbjct: 498 PD 499
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 342 bits (876), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 204/631 (32%), Positives = 329/631 (52%), Gaps = 21/631 (3%)
Query: 41 LFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFDE P+R +S N+ S F + +G V ++F+ +L S +
Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 116
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
LGE +HG V+ G + ++V +SL++MY+KC+R+E A F E + VSWN++IAG
Sbjct: 117 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
+V++ D + F LL M D + L D + K +H +KL L
Sbjct: 177 FVQVRD-IKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 235
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM-YNTMIAGFLQRQTVSCGYAREAL 268
+ + A++ YA G ++DA VF+ D + +N+MIAGF + + A
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHE-----LKESAF 290
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
LF +MQ + +T++ ++ AC G+ +H + KK L+ +L+ Y
Sbjct: 291 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350
Query: 329 SFF--GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
F G+++D + F S D++SW S+I G + G E A+ +S K D++
Sbjct: 351 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYA 410
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
S+++ C+D+A + G+QI A K G + V +S I MY+K G I+SAR FQ+I
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 447 NP-DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
+ V+W+ MI A HG +L +F M +K +H+T +LTACSH GL+ EGL
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
+M+ Y I ++H VDLLGRAG + AK I DP++ + LG CR
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
+ M +A+ ++E+EP +YV L ++Y+D K + V+K+M+++GVKK PG S
Sbjct: 591 CGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Query: 626 WIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
WIE+ ++V F +DRS+P+ Q IY ++++
Sbjct: 651 WIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 215/455 (47%), Gaps = 10/455 (2%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMH 168
I+V N +++ Y K + A +LFD + D VSWN++I+GY G + + L M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK-LEDAWCLFTCMK 93
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCL 228
RSG D Y+ LK K + +G+ +H IK N+ VG++L+DMYAK +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFD-LGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
DA F+ N +N +IAGF+Q + + + LGL EM+ + TF+
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW--LLGLM-EMKA-AVTMDAGTFAP 208
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST-PKL 347
++ +Q+HA++ K LQ + + +++ Y+ GS+ D R F+
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
D++SW SMIAG ++ E+A L Q + D + + ++ C+ G+ +
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 408 GWALKFGISNFIIVQNSQICMYAK--SGDIDSARLTFQEIENPDVVSWSEMICCNAHHGF 465
G +K G+ N+ I MY + +G ++ A F+ +++ D++SW+ +I A G
Sbjct: 329 GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+ +A++ F + S IK + +L +CS + G + + K G +N +
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS-GFVSNEFVIS 447
Query: 526 CIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
++ + + G +E A++ V W A++
Sbjct: 448 SLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 18/322 (5%)
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
+ H AIK S++ V +LD Y K G L A ++F+ + +NTMI+G+
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY---- 76
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
SCG +A LF M+ G + ++FS ++K ++ F G Q+H + K +C+
Sbjct: 77 -TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF-M 376
+VG SLVD Y+ ++D F + + VSW ++IAG V+ +TA LL M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
+ D + ++ + D +Q+ LK G+ + I + N+ I YA G +
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 437 SARLTFQEI-ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
A+ F + + D++SW+ MI + H A +F M ++ + T G+L+AC
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 496 S-----------HGGLVDEGLR 506
S HG ++ +GL
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLE 337
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
D +V ++D Y FG + F+ PK D VSW +MI+G GK E A L
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
SG D + S ++ A + GEQ+ G +K G + V +S + MYAK ++
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV-SGIKPNHITLLGVLTAC 495
A F+EI P+ VSW+ +I A + LM + + + + T +LT
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT-- 211
Query: 496 SHGGLVDEGLRYFEIMKKDY------GITANVKHSTCIVDLLGRAGRLEDAKRFILDSGF 549
L+D+ + + ++K+ + G+ + ++ G + DAKR G
Sbjct: 212 ----LLDDPM-FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 550 ADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYN 595
+ D + W +++ H+ + + + I+++ H + + Y
Sbjct: 267 SKDLISWNSMIAGFSKHE---LKESAFELFIQMQRHWVETDIYTYT 309
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 334/646 (51%), Gaps = 24/646 (3%)
Query: 115 LINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM-HRSGLD 173
+I Y++ R+ A LFD D VSWNS+I+G V GD +L M RS +
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD-MNTAVKLFDEMPERSVVS 130
Query: 174 FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVL 233
++ + + C ++ ++ + +K + +++ Y + G + DA+
Sbjct: 131 WT-----AMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALK 180
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
+F+ N + TMI G Q + + EAL LF M + + F+ ++ AC
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNER-----SGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
F G Q+H I K +E+V SL+ FY+ I D + F+ V WT
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
++++G N K E ALS+ + + P++ +S + C+ + G+++ G A+K
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
G+ V NS + MY+ SG+++ A F +I +VSW+ +I A HG A IF
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYG-ITANVKHSTCIVDLLG 532
M +P+ IT G+L+ACSH G +++G + F M I ++H TC+VD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVL 592
R G+L++A+ I + ++W ALL ACR+H D G+ A + L+ ++A+YVL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 593 LYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSR 652
L NIY AG+ ++R M+ G+ K+PG SW+ + K H F D+ P IY +
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEK 593
Query: 653 LEEMLVKINKIEFGDEKLPM--DISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVI 710
LE + K+ ++ + + D+ + + + +HSE+LA+ FG+I+ + + V V+
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDVEDEQKEEM--LWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 711 KNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
KNLRVC DCH +KLIS + R+I+LRD IRFHHFK G CSC DYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 22/304 (7%)
Query: 17 KFPFLLTLPFSNPVHSPIR----TRTLHLFDETPQRSIISCN-----------SPASLLA 61
+ P T +++ VH ++ L LF + P +++IS S +L
Sbjct: 153 QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
F+ + + F V+ C + +G +HG ++ G +V SLI Y+
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
CKRI +R +FD W ++++GY L + + + M R+ + + T S
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGY-SLNKKHEDALSIFSGMLRNSILPNQSTFAS 331
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
L +C +L+ GK +H A+KL L ++ VG +L+ MY+ +G + DAV VF
Sbjct: 332 GLNSCSALGTLDW-GKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK 390
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
+ +N++I G Q G + A +F +M L + TF+ ++ AC G
Sbjct: 391 SIVSWNSIIVGCAQH-----GRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 302 GRQI 305
GR++
Sbjct: 446 GRKL 449
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 197/569 (34%), Positives = 306/569 (53%), Gaps = 49/569 (8%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTFSSIVKA 292
+F N F +NT+I GF + A A+ LF EM + ++FTF S++KA
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDE---DKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG-------------------- 332
C G + G+QIH K DEFV +LV Y G
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 333 ----------------SIDDGIR---------CFNSTPKLDVVSWTSMIAGCVENGKFET 367
ID +R F+ + VVSW +MI+G NG F+
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
A+ + R+ +P+ + SV+ + + + GE + +A GI ++ ++ I
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
MY+K G I+ A F+ + +V++WS MI A HG A +A+ F M +G++P+ +
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 488 LLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDS 547
+ +LTACSHGGLV+EG RYF M G+ ++H C+VDLLGR+G L++A+ FIL+
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 548 GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRAL 607
D V+W+ALLGACR+ + MGK +A+ ++++ PH + +YV L N+Y G
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 608 EVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGD 667
E+R M+++ ++K+PG S I++ +H F+V+D SHP ++ I S L E+ K+ +
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 668 EKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLIS 727
+ ++ E + + +HSEK+A FG+IS P+R++KNLR+C DCH ++KLIS
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLIS 617
Query: 728 KLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K+ KRKI +RD RFHHF++G CSC DYW
Sbjct: 618 KVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 168/388 (43%), Gaps = 70/388 (18%)
Query: 41 LFDETPQRSIISCNSPASLLAFREARIAGLPVS--------------DFTFAGVLAYCGS 86
+F++ PQR+ S N+ + + A + ++ FTF VL C
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKC------------------------ 122
T ++ G+ IHG L G G FVM++L+ MY C
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 123 --KR-------------------IEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVF 161
KR +AAR+LFD + VSWN++I+GY L F++
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY-SLNGFFKDAV 259
Query: 162 ELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDM 221
E+ M + + + TL S L A SL +G+ LH+ A + + V+G+AL+DM
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLE-LGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 222 YAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNC 281
Y+K G + A+ VFE N ++ MI GF G A +A+ FC+M+ G+
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIH-----GQAGDAIDCFCKMRQAGVRP 373
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKN-LQCD-EFVGCSLVDFYSFFGSIDDGIR 339
S + +++ AC G GR+ +Q+ + L+ E GC +VD G +D+
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC-MVDLLGRSGLLDEAEE 432
Query: 340 CFNSTP-KLDVVSWTSMIAGCVENGKFE 366
+ P K D V W +++ C G E
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVE 460
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 139/329 (42%), Gaps = 57/329 (17%)
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS----FFGSIDDGIRCFNSTP 345
+ C I D QIHA K D ++ F + +D + FN P
Sbjct: 30 INNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 346 KLDVVSWTSMIAGCVEN--GKFETALSLLRQFMASG-RKPDEFIMSSVMGVCADMAAARS 402
+ + SW ++I G E+ K A++L + M+ +P+ F SV+ CA +
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 403 GEQIQGWALKFG-------ISNF------------------------------------- 418
G+QI G ALK+G +SN
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 419 -IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT 477
I++ N I Y + GD +AR+ F ++ VVSW+ MI + +GF +A+ +F M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
I+PN++TL+ VL A S G ++ G + + +D GI + + ++D+ + G +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 538 EDAKRFILDSGFADDPVMWRALLGACRVH 566
E A + + ++ + W A++ +H
Sbjct: 326 EKAIH-VFERLPRENVITWSAMINGFAIH 353
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 154/379 (40%), Gaps = 45/379 (11%)
Query: 123 KRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD--GFREVFELLARMHRSGLDFSDYTLG 180
+ ++ A +F+ + + SWN+II G+ + + M ++ + +T
Sbjct: 73 RDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
S LKAC + GK +H A+K + V + L+ MY G + DA ++F
Sbjct: 133 SVLKACAKTGKIQ-EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191
Query: 241 HNDF--------------MYNTMIAGFL----------------QRQTVSC--------- 261
D ++N MI G++ QR VS
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 262 -GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
G+ ++A+ +F EM+ + + T S++ A +G G +H ++ D+ +
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
G +L+D YS G I+ I F P+ +V++W++MI G +G+ A+ + +G
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKF-GISNFIIVQNSQICMYAKSGDIDSAR 439
+P + +++ C+ G + + G+ I + + +SG +D A
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 440 LTFQEIE-NPDVVSWSEMI 457
+ PD V W ++
Sbjct: 432 EFILNMPIKPDDVIWKALL 450
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 295/545 (54%), Gaps = 10/545 (1%)
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ 275
T L+ + + L+F S +DF++N++I + T + + M
Sbjct: 45 TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVI-----KSTSKLRLPLHCVAYYRRML 99
Query: 276 MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSID 335
++ S +TF+S++K+C + R G+ +H D +V +LV FYS G ++
Sbjct: 100 SSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDME 159
Query: 336 DGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCA 395
+ F+ P+ +V+W S+++G +NG + A+ + Q SG +PD S++ CA
Sbjct: 160 GARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACA 219
Query: 396 DMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSE 455
A G + + + G+ + + + I +Y++ GD+ AR F +++ +V +W+
Sbjct: 220 QTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTA 279
Query: 456 MICCNAHHGFANEALRIFELMTVS-GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
MI HG+ +A+ +F M G PN++T + VL+AC+H GLV+EG ++ M K
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 515 YGITANVKHSTCIVDLLGRAGRLEDAKRFI--LD-SGFADDPVMWRALLGACRVHKDTMM 571
Y + V+H C+VD+LGRAG L++A +FI LD +G A P +W A+LGAC++H++ +
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 572 GKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGS 631
G IA R+I LEP +V+L NIY +GK +R M ++K+ G S IEV +
Sbjct: 400 GVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Query: 632 KVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEK 691
K +MF + D SH + IY LE ++ + +I + + E + +HSEK
Sbjct: 460 KTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEK 519
Query: 692 LAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCS 751
LAV FG++ A + ++KNLR+C DCH K IS + R+I +RD +RFHHF+ G CS
Sbjct: 520 LAVAFGLLKTVDVA-ITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCS 578
Query: 752 CKDYW 756
C DYW
Sbjct: 579 CLDYW 583
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 164/329 (49%), Gaps = 17/329 (5%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
+R + + S++TF V+ C LR+G+ +H +V+G +V +L+ YSK
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
C +E AR +FD E V+WNS+++G+ + G E ++ +M SG + T S
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA-DEAIQVFYQMRESGFEPDSATFVS 213
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
L AC +++ +G +H I L+ N+ +GTAL+++Y++ G + A VF+ +
Sbjct: 214 LLSACAQTGAVS-LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ-MLGLNCSKFTFSSIVKACVAIGDFR 300
N + MI+ + GY ++A+ LF +M+ G + TF +++ AC G
Sbjct: 273 NVAAWTAMISAYGTH-----GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 301 AGRQIHAQICK--KNLQCDEFVGCSLVDFYSFFGSIDDG---IRCFNSTPKLDVVS-WTS 354
GR ++ ++ K + + E C +VD G +D+ I ++T K + WT+
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVC-MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPD 383
M+ C + ++ + + ++ +A +PD
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIA--LEPD 413
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 180/421 (42%), Gaps = 24/421 (5%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ +H ++VTG ++ LI + + I +LF + DD +NS+I +L
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
V RM S + S+YT S +K+ C D S IGK +H A+ +
Sbjct: 86 RLPLHCV-AYYRRMLSSNVSPSNYTFTSVIKS-CADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
V AL+ Y+K G + A VF+ + +N++++GF Q G A EA+ +F +
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN-----GLADEAIQVFYQ 198
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M+ G TF S++ AC G G +H I + L + +G +L++ YS G
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-GRKPDEFIMSSVMG 392
+ F+ + +V +WT+MI+ +G + A+ L + G P+ +V+
Sbjct: 259 VGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Query: 393 VCADMAAARSGEQI-----QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
CA G + + + L G+ + + + + M ++G +D A +++
Sbjct: 319 ACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCM----VDMLGRAGFLDEAYKFIHQLDA 374
Query: 448 PDVVS----WSEMI-CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD 502
+ W+ M+ C H + L+ + P H +L + A S G D
Sbjct: 375 TGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS--GKTD 432
Query: 503 E 503
E
Sbjct: 433 E 433
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 40 HLFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+FD P++SI++ NS S + F + R +G TF +L+ C T
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ LG +H ++ G+D + + +LIN+YS+C + AR +FD E + +W ++I+
Sbjct: 223 AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Query: 149 GYVRLGDGFREVFELLARMHRS-GLDFSDYTLGSALKAC 186
Y G G ++ EL +M G ++ T + L AC
Sbjct: 283 AYGTHGYG-QQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/491 (35%), Positives = 289/491 (58%), Gaps = 11/491 (2%)
Query: 273 EMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG 332
++ + GL+ F +S++ + GD R+ +++ K+L S+V+ Y+ G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWN----SVVNAYAKAG 142
Query: 333 SIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-----KPDEFIM 387
IDD + F+ P+ +V+SW+ +I G V GK++ AL L R+ +P+EF M
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI-E 446
S+V+ C + A G+ + + K+ + I++ + I MYAK G ++ A+ F +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVS-GIKPNHITLLGVLTACSHGGLVDEGL 505
DV ++S MICC A +G +E ++F MT S I PN +T +G+L AC H GL++EG
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
YF++M +++GIT +++H C+VDL GR+G +++A+ FI D ++W +LL R+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
D + R+IEL+P + +YVLL N+Y G+ +R M+ +G+ K PG S
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 626 WIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGM 685
++EV VH F+V D S S+ IY+ L+E++ ++ + + + + + E + + +
Sbjct: 443 YVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIAL 502
Query: 686 SHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHF 745
S+HSEKLA+ F ++ PVR+IKNLR+C DCH+ MK+ISKL R+I++RD RFHHF
Sbjct: 503 SYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHF 562
Query: 746 KEGLCSCKDYW 756
++G CSC+D+W
Sbjct: 563 RDGSCSCRDFW 573
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 164/375 (43%), Gaps = 60/375 (16%)
Query: 45 TPQRSIISCNSPASL-LAFREARIAGLPVSDF-TFAGVLAYCGSTRNLRLGEAIHGSVLV 102
+PQR +SP S+ L R R++ DF TF +L + +L LG+ H +L+
Sbjct: 40 SPQR-----HSPISVYLRMRNHRVS----PDFHTFPFLLPSFHNPLHLPLGQRTHAQILL 90
Query: 103 TGMDGMIFVMNSLINMYSKCKR-------------------------------IEAARVL 131
G+D FV SL+NMYS C I+ AR L
Sbjct: 91 FGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKL 150
Query: 132 FDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM-----HRSGLDFSDYTLGSALKAC 186
FD E + +SW+ +I GYV G ++E +L M + + + +++T+ + L AC
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGK-YKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSAC 209
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDF-M 245
+L GK +H K + ++V+GTAL+DMYAK G L A VF + D
Sbjct: 210 GRLGALE-QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKA 268
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAGRQ 304
Y+ MI G E LF EM +N + TF I+ ACV G G+
Sbjct: 269 YSAMICCLAMY-----GLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 305 IHAQICKKN--LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVE 361
+ ++ + GC +VD Y G I + S P + DV+ W S+++G
Sbjct: 324 YFKMMIEEFGITPSIQHYGC-MVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 362 NGKFETALSLLRQFM 376
G +T L++ +
Sbjct: 383 LGDIKTCEGALKRLI 397
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 304/563 (53%), Gaps = 10/563 (1%)
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
G LH +K L+ +V L++ Y+K+ D+ FE + ++++I+ F Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
+ +L +M L S K+C + GR +H K
Sbjct: 94 NEL-----PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD 148
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
D FVG SLVD Y+ G I + F+ P+ +VV+W+ M+ G + G+ E AL L ++
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
+ +++ SSV+ VCA+ G QI G ++K + V +S + +Y+K G
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
+ A F E+ ++ W+ M+ A H + + +F+ M +SG+KPN IT L VL AC
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 496 SHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM 555
SH GLVDEG YF+ MK+ I KH +VD+LGRAGRL++A I + +
Sbjct: 329 SHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 556 WRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQD 615
W ALL +C VHK+T + AD+V EL P ++ ++ L N Y G+ + A + RKL++D
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Query: 616 QGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF-GDEKLPM-D 673
+G KKE G+SW+E +KVH F +R H S+ IY +L E+ ++ K + D + +
Sbjct: 448 RGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLRE 507
Query: 674 ISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRK 733
+ G E N + +HSE+LA+ FG+I+ P P+RV+KNLRVC DCH +K +S +R
Sbjct: 508 VDGDEKNQTI--RYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRV 565
Query: 734 IILRDAIRFHHFKEGLCSCKDYW 756
II+RD RFH F++G CSC DYW
Sbjct: 566 IIVRDNNRFHRFEDGKCSCNDYW 588
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 183/427 (42%), Gaps = 42/427 (9%)
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD------------- 133
TR+ G +HG V+ +G+ + V N+LIN YSK + +R F+
Sbjct: 28 TRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSI 87
Query: 134 -TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSL 192
+C +++ W S+ E L +M L D+ L SA K+C +
Sbjct: 88 ISCFAQNELPWMSL---------------EFLKKMMAGNLRPDDHVLPSATKSCAILSRC 132
Query: 193 NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG 252
+ IG+ +H ++K ++++ VG++L+DMYAK G + A +F+ N ++ M+ G
Sbjct: 133 D-IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYG 191
Query: 253 FLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK 312
+ Q G EAL LF E L + ++FSS++ C GRQIH K
Sbjct: 192 YAQ-----MGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKS 246
Query: 313 NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
+ FVG SLV YS G + + FN P ++ W +M+ ++ + + L
Sbjct: 247 SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELF 306
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS 432
++ SG KP+ +V+ C+ G + I S + M ++
Sbjct: 307 KRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRA 366
Query: 433 GDIDSAR--LTFQEIENPDVVSWSEMICCNAHHGF---ANEALRIFELMTVSGIKPNHIT 487
G + A +T I+ + V + + C H A A ++FEL VS HI+
Sbjct: 367 GRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSS--GMHIS 424
Query: 488 LLGVLTA 494
L A
Sbjct: 425 LSNAYAA 431
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 56 PASLLAFREARIAG-LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNS 114
P L F + +AG L D C +G ++H + TG D +FV +S
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 115 LINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF 174
L++MY+KC I AR +FD + + V+W+ ++ GY ++G+ E L L
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN-EEALWLFKEALFENLAV 215
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
+DY+ S + + C + +L +G+ +H +IK +S+ VG++L+ +Y+K G A V
Sbjct: 216 NDYSFSSVI-SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
F N ++N M+ + Q + ++ + LF M++ G+ + TF +++ AC
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQH-----SHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS-WT 353
G GR Q+ + ++ + SLVD G + + + + P S W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 354 SMIAGCVENGKFETA 368
+++ C + E A
Sbjct: 390 ALLTSCTVHKNTELA 404
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 21/209 (10%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE PQR++++ + + +L F+EA L V+D++F+ V++ C ++
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L LG IHG + + D FV +SL+++YSKC E A +F+ + WN+++
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIK 205
Y + ++V EL RM SG+ + T + L AC VD+ +M
Sbjct: 293 YAQHSHT-QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEP 351
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
D + +L+DM + G L +A+ V
Sbjct: 352 TDKHY-----ASLVDMLGRAGRLQEALEV 375
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/603 (34%), Positives = 317/603 (52%), Gaps = 52/603 (8%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDM-------YAKTGCLTDAVLVFESFRYHNDFMYNTM 249
K++H ++ L S++ V + LL + T L A +F + N F++N +
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLL 88
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
I F S +A G + +M + TF ++KA + G Q H+QI
Sbjct: 89 IRCFSTGAEPS-----KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG-----CVENGK 364
+ Q D +V SLV Y+ G I R F DVVSWTSM+AG VEN +
Sbjct: 144 VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAR 203
Query: 365 --------------------------FETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
FE A+ L G +E +M SV+ CA +
Sbjct: 204 EMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG 263
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
A GE+ + +K ++ +I+ + + M+ + GDI+ A F+ + D +SWS +I
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGIT 518
A HG A++A+ F M G P +T VL+ACSHGGLV++GL +E MKKD+GI
Sbjct: 324 GLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIE 383
Query: 519 ANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADR 578
++H CIVD+LGRAG+L +A+ FIL + + ALLGAC+++K+T + + + +
Sbjct: 384 PRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNM 443
Query: 579 VIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLV 638
+I+++P + YVLL NIY AG+ + +R +M+++ VKK PG S IE+ K++ F +
Sbjct: 444 LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTM 503
Query: 639 -DDRSHPMSQLIYSRLEEMLVKINKIEF----GDEKLPMDISGTELNGIVGMSHHSEKLA 693
DD+ HP I + EE+L KI I + GD +D E + + HSEKLA
Sbjct: 504 GDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESS----IHMHSEKLA 559
Query: 694 VTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCK 753
+ +G++ +R++KNLRVC DCH KLIS++ R++I+RD RFHHF+ G+CSC+
Sbjct: 560 IAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCR 619
Query: 754 DYW 756
DYW
Sbjct: 620 DYW 622
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 36/268 (13%)
Query: 74 DFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD 133
+ TF ++ + +GE H ++ G ++V NSL++MY+ C I AA +F
Sbjct: 117 NITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFG 176
Query: 134 TCDELDDVSWNSIIAGYVRLG--DGFREVF----------------------------EL 163
D VSW S++AGY + G + RE+F +L
Sbjct: 177 QMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDL 236
Query: 164 LARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYA 223
M R G+ ++ + S + +C +L G+ + +K + N+++GTAL+DM+
Sbjct: 237 FEFMKREGVVANETVMVSVISSCAHLGALE-FGERAYEYVVKSHMTVNLILGTALVDMFW 295
Query: 224 KTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSK 283
+ G + A+ VFE + ++++I G G+A +A+ F +M LG
Sbjct: 296 RCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH-----GHAHKAMHYFSQMISLGFIPRD 350
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICK 311
TF++++ AC G G +I+ + K
Sbjct: 351 VTFTAVLSACSHGGLVEKGLEIYENMKK 378
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 41 LFDETPQRSI----ISCNSPASLLAFREA-------RIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P R++ I N A F +A + G+ ++ V++ C
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L GE + V+ + M + + +L++M+ +C IE A +F+ E D +SW+SII G
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIK 205
G + + ++M G D T + L AC V+K L M I+
Sbjct: 325 LAVHGHAHKAM-HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIE 383
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDA 231
L ++DM + G L +A
Sbjct: 384 PRLEHY----GCIVDMLGRAGKLAEA 405
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 332 bits (852), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 233/740 (31%), Positives = 360/740 (48%), Gaps = 48/740 (6%)
Query: 58 SLLAFREARIAGL-PVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLI 116
+L F R AGL +++TF +L C LG IHG ++ +G +FV NSL+
Sbjct: 164 ALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLM 223
Query: 117 NMYSKCKRIEAARV--LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHR-SGLD 173
++Y K V LFD + D SWN++++ V+ G + F+L M+R G
Sbjct: 224 SLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHK-AFDLFYEMNRVEGFG 282
Query: 174 FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK--------- 224
+TL S L + C D S+ G+ LH AI++ L + V AL+ Y+K
Sbjct: 283 VDSFTL-STLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVES 341
Query: 225 ----------------------TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
G + AV +F + N YN ++AGF + G
Sbjct: 342 LYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRN-----G 396
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
+ +AL LF +M G+ + F+ +S V AC + + + QIH K + +
Sbjct: 397 HGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT 456
Query: 323 SLVDFYSFFGSIDDGIRCFNSTP-KLDVV-SWTSMIAGCVENGKFETALSLLRQFMASGR 380
+L+D + + D F+ P LD + TS+I G NG + A+SL + + +
Sbjct: 457 ALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQK 516
Query: 381 K-PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
DE ++ ++ VC + G QI +ALK G + I + NS I MYAK D D A
Sbjct: 517 LFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAI 576
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA--CSH 497
F + DV+SW+ +I C +EAL ++ M IKP+ ITL V++A +
Sbjct: 577 KIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTE 636
Query: 498 GGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWR 557
+ F MK Y I +H T V +LG G LE+A+ I + + R
Sbjct: 637 SNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLR 696
Query: 558 ALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG 617
ALL +CR+H +T + K +A ++ +P + Y+L NIY+ +G R+ +R+ M+++G
Sbjct: 697 ALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERG 756
Query: 618 VKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGT 677
+K P SWI +K+H F D SHP + IY LE ++++ K+ + +
Sbjct: 757 YRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVD 816
Query: 678 ELNGIVGMSHHSEKLAVTFGIISL-PKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIIL 736
E + HHS KLAVT+GI+S + PVRV+KN+ +C DCH K IS + KR+I+L
Sbjct: 817 EFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVL 876
Query: 737 RDAIRFHHFKEGLCSCKDYW 756
RD+ FHHF G CSC+D W
Sbjct: 877 RDSSGFHHFVNGKCSCRDLW 896
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 170/379 (44%), Gaps = 24/379 (6%)
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
+ K +H +KL +G AL+ Y K G +A+LVF S Y +I+GF
Sbjct: 98 VTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFS 156
Query: 255 QRQTVSCGYAREALGLFCEMQMLGL-NCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
+ EAL +F M+ GL +++TF +I+ ACV + F G QIH I K
Sbjct: 157 R-----LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSG 211
Query: 314 LQCDEFVGCSLVDFYS--FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSL 371
FV SL+ Y S DD ++ F+ P+ DV SW ++++ V+ GK A L
Sbjct: 212 FLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDL 271
Query: 372 LRQF-MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYA 430
+ G D F +S+++ C D + G ++ G A++ G+ + V N+ I Y+
Sbjct: 272 FYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYS 331
Query: 431 KSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLG 490
K D+ ++ + D V+++EMI G + A+ IF +T + N IT
Sbjct: 332 KFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT----EKNTITYNA 387
Query: 491 VLTACSHGGLVDEGLRYFEIMKK------DYGITANVKHSTCIVDLLGRAGRLEDAKRFI 544
++ G + L+ F M + D+ +T+ V C L+ E F
Sbjct: 388 LMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV--DAC--GLVSEKKVSEQIHGFC 443
Query: 545 LDSGFADDPVMWRALLGAC 563
+ G A +P + ALL C
Sbjct: 444 IKFGTAFNPCIQTALLDMC 462
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 125/602 (20%), Positives = 252/602 (41%), Gaps = 71/602 (11%)
Query: 12 PFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCN---SPASL--------- 59
P IP P P H P +L L+ + + +S + SPA++
Sbjct: 13 PHIPPSIP---------PNHRPKLLSSLSLYRKPERLFALSASLSLSPATIHECSSSSSS 63
Query: 60 --LAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+F + + F +L ++ + +A+H S L + + N+LI+
Sbjct: 64 SSSSFDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKL-REEKTRLGNALIS 122
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGL-DFSD 176
Y K A ++F + VS+ ++I+G+ RL E ++ RM ++GL ++
Sbjct: 123 TYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEI-EALKVFFRMRKAGLVQPNE 181
Query: 177 YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK-TGCLTDAVL-V 234
YT + L A CV S +G +H +K +++ V +L+ +Y K +G D VL +
Sbjct: 182 YTFVAILTA-CVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKL 240
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML-GLNCSKFTFSSIVKAC 293
F+ + +NT+++ ++ G + +A LF EM + G FT S+++ +C
Sbjct: 241 FDEIPQRDVASWNTVVSSLVKE-----GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS------------------------ 329
GR++H + + L + V +L+ FYS
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 330 -------FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
FG +D + F + + + +++ +++AG NG AL L + G +
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
+F ++S + C ++ + EQI G+ +KFG + +Q + + M + + A F
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 443 -QEIENPDVV-SWSEMICCNAHHGFANEALRIFE-LMTVSGIKPNHITLLGVLTACSHGG 499
Q N D + + +I A +G ++A+ +F + + + ++L +L C G
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Query: 500 LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRAL 559
+ G + G +++ ++ + + +DA + I ++ D + W +L
Sbjct: 536 FREMGYQ-IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIK-IFNTMREHDVISWNSL 593
Query: 560 LG 561
+
Sbjct: 594 IS 595
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 331 bits (849), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 284/524 (54%), Gaps = 6/524 (1%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
+FE+ + ++N+M G+ + E LF E+ G+ +TF S++KAC
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTN-----PLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
GRQ+H K L + +V +L++ Y+ +D F+ + VV +
Sbjct: 140 AVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYN 199
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
+MI G + ALSL R+ KP+E + SV+ CA + + G+ I +A K
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
++ V + I M+AK G +D A F+++ D +WS MI A+HG A +++ +F
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
E M ++P+ IT LG+L ACSH G V+EG +YF M +GI ++KH +VDLL R
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLL 593
AG LEDA FI + P++WR LL AC H + + + +++R+ EL+ YV+L
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVIL 439
Query: 594 YNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRL 653
N+Y K + +RK+M+D+ K PG S IEV + VH F D + ++ L
Sbjct: 440 SNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRAL 499
Query: 654 EEMLVKINKIEF-GDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKN 712
+EM+ ++ + D + + + + + + +HSEKLA+TFG+++ P +RV+KN
Sbjct: 500 DEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKN 559
Query: 713 LRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
LRVC DCH KLIS + RK++LRD RFHHF++G CSC D+W
Sbjct: 560 LRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 191/406 (47%), Gaps = 22/406 (5%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKC---KRIEAARVLFDTCD 136
+++ C S R L I + + ++ + FV LIN ++ + AR LF+
Sbjct: 35 LISKCNSLRELM---QIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMS 90
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E D V +NS+ GY R + EVF L + G+ +YT S LKAC V K+L G
Sbjct: 91 EPDIVIFNSMARGYSRFTNPL-EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE-EG 148
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ LH ++KL L+ N+ V L++MY + + A VF+ YN MI G+ +R
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
EAL LF EMQ L ++ T S++ +C +G G+ IH + KK+ C
Sbjct: 209 NR-----PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH-KYAKKHSFC 262
Query: 317 DEF-VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
V +L+D ++ GS+DD + F D +W++MI +GK E ++ + +
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQ-IQGWALKFGISNFIIVQNSQICMYAKSGD 434
+ +PDE ++ C+ G + KFGI I S + + +++G+
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 382
Query: 435 IDSARLTFQEIE-NPDVVSWSEMI-CCNAHHGF---ANEALRIFEL 475
++ A ++ +P + W ++ C++H+ + RIFEL
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 22/343 (6%)
Query: 40 HLFDETPQRSIISCNS----------PASLLA-FREARIAGLPVSDFTFAGVLAYCGSTR 88
HLF+ + I+ NS P + + F E G+ ++TF +L C +
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L G +H + G+D ++V +LINMY++C+ +++AR +FD E V +N++I
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
GY R E L M L ++ TL S L +C + SL+ +GK +H A K
Sbjct: 204 GYARRNRP-NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD-LGKWIHKYAKKHSF 261
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+ V TAL+DM+AK G L DAV +FE RY + ++ MI + G A +++
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH-----GKAEKSM 316
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN--LQCDEFVGCSLVD 326
+F M+ + + TF ++ AC G GR+ +Q+ K + + G S+VD
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG-SMVD 375
Query: 327 FYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETA 368
S G+++D + P + W ++A C + + A
Sbjct: 376 LLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 228/767 (29%), Positives = 360/767 (46%), Gaps = 113/767 (14%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
FR G+ DF F +L C + ++ G+ IH V+ GM + V NS++ +Y+K
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 122 CKRIEAARVLFDTCDELDDVSWNSI----------------------------------- 146
C ++ A F E D ++WNS+
Sbjct: 229 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 147 IAGYVRLG---------------------------------DGFR-EVFELLARMHRSGL 172
I GY +LG +G R + ++ +M +G+
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 173 DFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
+ T+ SA+ AC K +N G +H A+K+ +++VG +L+DMY+K G L DA
Sbjct: 349 VPNAVTIMSAVSACSCLKVIN-QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
VF+S + + + +N+MI G+ Q GY +A LF MQ L + T+++++
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQ-----AGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
+ GD + ++ K DG + + +W
Sbjct: 463 YIKNGDEGEAMDLFQRMEK------------------------DG------KVQRNTATW 492
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
+IAG ++NGK + AL L R+ S P+ + S++ CA++ A+ +I G L+
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
+ V+N+ YAKSGDI+ +R F +E D+++W+ +I HG AL +
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
F M GI PN TL ++ A G VDEG + F + DY I ++H + +V L G
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVL 592
RA RLE+A +FI + + +W + L CR+H D M H A+ + LEP A+ +
Sbjct: 673 RANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESI 732
Query: 593 LYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSR 652
+ IY K R+LE K +D +KK G SWIEV + +H F D+S + ++Y
Sbjct: 733 VSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPL 792
Query: 653 LEEMLVKINKIEFGDEKLPMDISGTELN-GIVGMSHHSEKLAVTFGIISLPKSAP--VRV 709
+E+M N+ + + +L ++ G E GI HSEK A+ FG+IS ++ +R+
Sbjct: 793 VEKMSRLDNRSDQYNGELWIEEEGREETCGI-----HSEKFAMAFGLISSSGASKTTIRI 847
Query: 710 IKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+KNLR+C DCH T K +SK I+L D HHFK G CSCKDYW
Sbjct: 848 LKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 230/503 (45%), Gaps = 52/503 (10%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSV-LVTGMDGMIFVMNSLINMYSKCKRIEA 127
G V T+ +L C + ++ LG +H L T D +FV L++MY+KC I
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPD--VFVETKLLSMYAKCGCIAD 133
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
AR +FD+ E + +W+++I Y R + +REV +L M + G+ D+ L+ C
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSR-ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 188 VDKSLNC----IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND 243
NC GK++H IKL ++S + V ++L +YAK G L A F R +
Sbjct: 193 -----NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV 247
Query: 244 FMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGR 303
+N+++ + Q G EA+ L EM+ G++ T++ ++ +G
Sbjct: 248 IAWNSVLLAYCQN-----GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG------ 296
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
+CD L+ FG DV +WT+MI+G + NG
Sbjct: 297 -----------KCD--AAMDLMQKMETFGIT------------ADVFTWTAMISGLIHNG 331
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
AL + R+ +G P+ + S + C+ + G ++ A+K G + ++V N
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
S + MY+K G ++ AR F ++N DV +W+ MI G+ +A +F M + ++P
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 484 NHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK-- 541
N IT +++ G E + F+ M+KD + N I+ + G+ ++A
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 542 -RFILDSGFADDPVMWRALLGAC 563
R + S F + V +LL AC
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPAC 534
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 201/448 (44%), Gaps = 54/448 (12%)
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
C+D +G++LH L ++ V T LL MYAK GC+ DA VF+S R N F +
Sbjct: 91 CIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTW 149
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
+ MI + + RE LF M G+ F F I++ C GD AG+ IH
Sbjct: 150 SAMIGAYSRENR-----WREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFE 366
+ + K + V S++ Y+ G +D + F + DV++W S++ +NGK E
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 367 TALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQI 426
A+ L+++ K GIS ++ N I
Sbjct: 265 EAVELVKEME-----------------------------------KEGISPGLVTWNILI 289
Query: 427 CMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIK 482
Y + G D+A Q++E DV +W+ MI H+G +AL +F M ++G+
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
PN +T++ ++ACS ++++G I K G +V +VD+ + G+LEDA++
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVK-MGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 543 FILDSGFADDPVMWRALL-GACRV---HKDTMMGKHIADRVIELEPHAAASYVLLYNIYN 598
+ DS D W +++ G C+ K + + D L P+ ++ + + Y
Sbjct: 409 -VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD--ANLRPN-IITWNTMISGYI 464
Query: 599 DAGKEKRALEVRKLMQDQGVKKEPGISW 626
G E A+++ + M+ G + +W
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 5/308 (1%)
Query: 278 GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG 337
G + T+ ++++C+ G GR +HA+ + D FV L+ Y+ G I D
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYAKCGCIADA 134
Query: 338 IRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADM 397
+ F+S + ++ +W++MI ++ L R M G PD+F+ ++ CA+
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 398 AAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMI 457
+G+ I +K G+S+ + V NS + +YAK G++D A F+ + DV++W+ ++
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 458 CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGI 517
+G EA+ + + M GI P +T ++ + G D + + M+ +GI
Sbjct: 255 LAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGI 313
Query: 518 TANVKHSTCIVDLLGRAG---RLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKH 574
TA+V T ++ L G + D R + +G + V + + AC K G
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 575 IADRVIEL 582
+ +++
Sbjct: 374 VHSIAVKM 381
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L FR+ + + + T +L C + ++ IHG VL +D + V N+L +
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
Y+K IE +R +F + D ++WNS+I GYV G + L +M G+ +
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHG-SYGPALALFNQMKTQGITPNRG 626
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
TL S + A + +++ K+ + A + + +A++ +Y + L +A+ +
Sbjct: 627 TLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE 686
Query: 238 FRYHND 243
++
Sbjct: 687 MNIQSE 692
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 329 bits (843), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 327/598 (54%), Gaps = 8/598 (1%)
Query: 61 AFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYS 120
F R+ + + TF VL+ C S + LG +HG V+V+G+D + NSL++MYS
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 121 KCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLG 180
KC R + A LF D V+WN +I+GYV+ G E M SG+ T
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG-LMEESLTFFYEMISSGVLPDAITFS 344
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
S L + ++L K +H ++ ++ ++ + +AL+D Y K ++ A +F
Sbjct: 345 SLLPSVSKFENLE-YCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
+ ++ MI+G+L G ++L +F + + ++ ++ T SI+ + +
Sbjct: 404 VDVVVFTAMISGYLHN-----GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
GR++H I KK +GC+++D Y+ G ++ F K D+VSW SMI C
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
++ A+ + RQ SG D +S+ + CA++ + G+ I G+ +K +++ +
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVS 479
+++ I MYAK G++ +A F+ ++ ++VSW+ +I +HG ++L +F E++ S
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
GI+P+ IT L ++++C H G VDEG+R+F M +DYGI +H C+VDL GRAGRL +
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYND 599
A + F D +W LLGACR+HK+ + + + ++++L+P + YVL+ N + +
Sbjct: 699 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 758
Query: 600 AGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEML 657
A + + +VR LM+++ V+K PG SWIE+ + H+F+ D +HP S IYS L +L
Sbjct: 759 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLL 816
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 235/498 (47%), Gaps = 12/498 (2%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
TF ++ C + +N + + + +V GMD FV +SLI Y + +I+ LFD
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
+ D V WN ++ GY + G V + + M + + T L + C K L +
Sbjct: 200 LQKDCVIWNVMLNGYAKCG-ALDSVIKGFSVMRMDQISPNAVTFDCVL-SVCASKLLIDL 257
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
G LH + ++ + +LL MY+K G DA +F + +N MI+G++Q
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
G E+L F EM G+ TFSS++ + + +QIH I + ++
Sbjct: 318 S-----GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
D F+ +L+D Y + F+ +DVV +T+MI+G + NG + +L + R
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
+ P+E + S++ V + A + G ++ G+ +K G N + + I MYAK G +
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
+ A F+ + D+VSW+ MI A + A+ IF M VSGI + +++ L+AC
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 496 SHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM 555
++ G M K + + ++V + ++D+ + G L+ A + + + V
Sbjct: 553 ANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMN-VFKTMKEKNIVS 610
Query: 556 WRALLGACRVH---KDTM 570
W +++ AC H KD++
Sbjct: 611 WNSIIAACGNHGKLKDSL 628
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 245/593 (41%), Gaps = 68/593 (11%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD--E 137
+L C + LR G+ +H ++V + G + ++ MY+ C +F D
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGK 197
WNSII+ +VR G + +M G+ T +KAC K+ I
Sbjct: 101 SSIRPWNSIISSFVRNG-LLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI-D 158
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
L L ++ N V ++L+ Y + G + +F+ + ++N M+ G+ +
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK-- 216
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
CG + F M+M ++ + TF ++ C + G Q+H + + +
Sbjct: 217 ---CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
+ SL+ YS G DD + F + D V+W MI+G V++G E +L+ + ++
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
SG PD SS++ + +QI + ++ IS I + ++ I Y K +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 438 ARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL------LGV 491
A+ F + + DVV ++ MI H+G ++L +F + I PN ITL +G+
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 492 LTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA--------KRF 543
L A G L F I+KK + N+ ++D+ + GR+ A KR
Sbjct: 454 LLALKLG----RELHGF-IIKKGFDNRCNI--GCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 544 ILD--------------------------SGFADDPVMWRALLGACRVHKDTMMGKHIAD 577
I+ SG D V A L AC GK I
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 578 RVIELEPHAAASYVL----LYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
+I+ H+ AS V L ++Y G K A+ V K M+++ + +SW
Sbjct: 567 FMIK---HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI-----VSW 611
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFE--SF 238
S L C + +L GK +H I ++ + +L MYA G +D +F
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 239 RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
R + +N++I+ F++ G +AL + +M G++ TF +VKACVA+ +
Sbjct: 99 RRSSIRPWNSIISSFVRN-----GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN 153
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG 358
F+ + + + C+EFV SL+ Y +G ID + F+ + D V W M+ G
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
+ G ++ + P+ V+ VCA G Q+ G + G+
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
++NS + MY+K G D A F+ + D V+W+ MI G E+L F M
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 479 SGIKPNHITLLGVLTACS 496
SG+ P+ IT +L + S
Sbjct: 334 SGVLPDAITFSSLLPSVS 351
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 6/280 (2%)
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
S +++AC R G+Q+HA + ++ D + ++ Y+ GS D + F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 346 --KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
+ + W S+I+ V NG AL+ + + G PD ++ C + +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHH 463
+ + G+ V +S I Y + G ID F + D V W+ M+ A
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR-YFEIMKKDYGITANVK 522
G + ++ F +M + I PN +T VL+ C+ L+D G++ + ++ ++K
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 523 HSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
+S ++ + + GR +DA + AD V W ++
Sbjct: 278 NS--LLSMYSKCGRFDDASKLFRMMSRADT-VTWNCMISG 314
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 307/586 (52%), Gaps = 9/586 (1%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
FRE R + + +T AG+ S ++ +G H V+ G I+V SL+ MY K
Sbjct: 106 FREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCK 165
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG--DGFREVFELLARMHRSGLDFSDYTL 179
+E +F E + +W+++++GY G + +VF L R G D SDY
Sbjct: 166 AGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVF 224
Query: 180 GSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
+ L + + +G+ +H IK L + + AL+ MY+K L +A +F+S
Sbjct: 225 TAVLSSLAATIYVG-LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG 283
Query: 240 YHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF 299
N ++ M+ G+ Q G + EA+ LF M G+ S++T ++ AC I
Sbjct: 284 DRNSITWSAMVTGYSQN-----GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 300 RAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGC 359
G+Q+H+ + K + F +LVD Y+ G + D + F+ + DV WTS+I+G
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 360 VENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFI 419
V+N E AL L R+ +G P++ M+SV+ C+ +A G+Q+ G +K G +
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 420 IVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVS 479
+ ++ MY+K G ++ L F+ N DVVSW+ MI +H+G +EAL +FE M
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
G++P+ +T + +++ACSH G V+ G YF +M G+ V H C+VDLL RAG+L++
Sbjct: 519 GMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKE 578
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYND 599
AK FI + +WR LL AC+ H +G + ++++ L +++YV L IY
Sbjct: 579 AKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTA 638
Query: 600 AGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPM 645
G+ + V K M+ GV KE G SWIE+ ++ H+F+V D HPM
Sbjct: 639 LGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 233/483 (48%), Gaps = 10/483 (2%)
Query: 81 LAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDD 140
L + RNL G A+HG ++ TG I N L+N Y+KC ++ A +F+ D
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80
Query: 141 VSWNSIIAGYVRLG--DGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
VSWNS+I GY + G V +L M + + YTL KA +S + +G+
Sbjct: 81 VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS-STVGRQ 139
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
H +K+ ++ V T+L+ MY K G + D + VF N + ++TM++G+ R
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGR 199
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
V A + LF + G + S + F++++ + A GRQIH K L
Sbjct: 200 VE--EAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS 378
+ +LV YS S+++ + F+S+ + ++W++M+ G +NG+ A+ L + ++
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 379 GRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSA 438
G KP E+ + V+ C+D+ G+Q+ + LK G + + + MYAK+G + A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 439 RLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHG 498
R F ++ DV W+ +I + EAL ++ M +GI PN T+ VL ACS
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 499 GLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWR 557
++ G + + +K +G+ + + + + + G LED + D V W
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPI--GSALSTMYSKCGSLEDGN-LVFRRTPNKDVVSWN 493
Query: 558 ALL 560
A++
Sbjct: 494 AMI 496
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 34 IRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLG 93
++ R + L+ + + ++ +L+ +R + AG+ +D T A VL C S L LG
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ +HG + G + + ++L MYSKC +E ++F D VSWN++I+G
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
G G E EL M G++ D T + + AC
Sbjct: 503 GQG-DEALELFEEMLAEGMEPDDVTFVNIISAC 534
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 344/668 (51%), Gaps = 38/668 (5%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG--DGFREVFELLAR---- 166
NS++ Y AR LFD + + +SWN +++GY++ G D R+VF+L+
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 167 ---------MHRSGLDFSDYTLGSALKACCVDKSLNCIG-----KMLHVCAI-KLDLNSN 211
+H +D ++ + V ++ IG ++ C + ++ + +
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD 171
Query: 212 MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
+ T+++ K G + +A +F+ + + TM+ G+ Q V AR+ +
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD--DARKIFDVM 229
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC-SLVDFYSF 330
E ++ +++S++ +G + GR A+ + + + C +++
Sbjct: 230 PEK-------TEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQ 277
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
G I R F+S + + SW ++I NG AL L G +P + S+
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
+ VCA +A+ G+Q+ ++ + V + + MY K G++ ++L F + D+
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITLLGVLTACSHGGLVDEGLRYFE 509
+ W+ +I A HG EAL++F M +SG KPN +T + L+ACS+ G+V+EGL+ +E
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 510 IMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDT 569
M+ +G+ H C+VD+LGRAGR +A I D +W +LLGACR H
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 570 MMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
+ + A ++IE+EP + +Y+LL N+Y G+ E+RKLM+ + V+K PG SW EV
Sbjct: 518 DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Query: 630 GSKVHMFLVDD-RSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHH 688
+KVH F SHP + I L+E+ + + + + E + + +H
Sbjct: 578 ENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYH 637
Query: 689 SEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEG 748
SE+LAV + ++ L + P+RV+KNLRVCSDCH +K+ISK+++R+IILRDA RFHHF+ G
Sbjct: 638 SERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNG 697
Query: 749 LCSCKDYW 756
CSCKDYW
Sbjct: 698 ECSCKDYW 705
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 26/271 (9%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFR-EVFELLARM 167
+ N++I+ + I AR +FD+ E +D SW ++I + R +GF E +L M
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER--NGFELEALDLFILM 322
Query: 168 HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
+ G+ + TL S L C SL+ GK +H ++ + ++ V + L+ MY K G
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHH-GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTF 286
L + L+F+ F + M+N++I+G+ S G EAL +FCEM + G ++ TF
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGY-----ASHGLGEEALKVFCEMPLSGSTKPNEVTF 436
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS--------LVDFYSFFGSIDDGI 338
+ + AC G G +I+ + + G +VD G ++ +
Sbjct: 437 VATLSACSYAGMVEEGLKIYESM-------ESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 339 RCFNS-TPKLDVVSWTSMIAGCVENGKFETA 368
+S T + D W S++ C + + + A
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
T +L+ C S +L G+ +H ++ D ++V + L+ MY KC + ++++FD
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG-LDFSDYTLGSALKACC----VDK 190
D + WNSII+GY G G E ++ M SG ++ T + L AC V++
Sbjct: 393 PSKDIIMWNSIISGYASHGLG-EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND 243
L M V +K + ++ ++DM + G +A+ + +S D
Sbjct: 452 GLKIYESMESVFGVK-PITAHY---ACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 209/649 (32%), Positives = 328/649 (50%), Gaps = 54/649 (8%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMH 168
IF +N +I + I+ A +F + ++WNS++ G + E +L +
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCL 228
+ L ++ +K+ + +M A + M+ G YA+ G +
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN---TMITG------YARRGEM 171
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
A +F S N+ +N MI+G+++ CG +A F + G+
Sbjct: 172 EKARELFYSMMEKNEVSWNAMISGYIE-----CGDLEKASHFFKVAPVRGV--------- 217
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
+ + G +A + A+ K++ ++ +
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNK-----------------------------N 248
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
+V+W +MI+G VEN + E L L R + G +P+ +SS + C++++A + G QI
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE 468
K + N + S I MY K G++ A F+ ++ DVV+W+ MI A HG A++
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
AL +F M + I+P+ IT + VL AC+H GLV+ G+ YFE M +DY + H TC+V
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 529 DLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
DLLGRAG+LE+A + I F ++ LLGACRVHK+ + + A+++++L AA
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAA 488
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQL 648
YV L NIY + + VRK M++ V K PG SWIE+ +KVH F DR HP
Sbjct: 489 GYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDS 548
Query: 649 IYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVG-MSHHSEKLAVTFGIISLPKSAPV 707
I+ +L+E+ K+ + E L + E + HSEKLAV FG I LP+ + +
Sbjct: 549 IHKKLKELEKKMKLAGYKPE-LEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQI 607
Query: 708 RVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+V KNLR+C DCH +K IS++EKR+II+RD RFHHFK+G CSC DYW
Sbjct: 608 QVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 17/192 (8%)
Query: 59 LLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINM 118
L FR G+ + + L C L+LG IH V + + + + SLI+M
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 119 YSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDG------FREVFELLARMHRSGL 172
Y KC + A LF+ + D V+WN++I+GY + G+ FRE+ + R
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR------ 382
Query: 173 DFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK-LDLNSNMVVGTALLDMYAKTGCLTDA 231
D+ A+ C L IG ++ + T ++D+ + G L +A
Sbjct: 383 --PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
Query: 232 VLVFES--FRYH 241
+ + S FR H
Sbjct: 441 LKLIRSMPFRPH 452
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 319/628 (50%), Gaps = 20/628 (3%)
Query: 40 HLFDETPQRSIISC-----------NSPASLLAFREARIAGLPVSDFT--FAGVLAYCGS 86
+FD+ P I+S NS +L+ F R+ VS T + VL CG
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
+ N+ GE++H + T + ++V +SL++MY + +I+ + +F + V+W +I
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
I G V G ++E + M RS YT ALKAC + + GK +H I
Sbjct: 181 ITGLVHAGR-YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK-YGKAIHTHVIVR 238
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
+ + V +L MY + G + D + +FE+ + + ++I + + G +
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR-----IGQEVK 293
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A+ F +M+ + ++ TF+S+ AC ++ G Q+H + L V S++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
YS G++ F D++SW+++I G + G E SG KP +F
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
++S++ V +MA G Q+ AL FG+ V++S I MY+K G I A + F E +
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
D+VS + MI A HG + EA+ +FE G +P+ +T + VLTAC+H G +D G
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
YF +M++ Y + +H C+VDLL RAGRL DA++ I + + D V+W LL AC+
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 567 KDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
D G+ A+R++EL+P A + V L NIY+ G + A VRK M+ +GV KEPG S
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 627 IEVGSKVHMFLVDDRSHPMSQLIYSRLE 654
I++ V F+ DR HP S+ IY+ LE
Sbjct: 654 IKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 208/459 (45%), Gaps = 19/459 (4%)
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM---- 167
+ SLIN + AAR +FD D VSW SII YV + E L + M
Sbjct: 47 LRSLIN----AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNS-DEALILFSAMRVVD 101
Query: 168 HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
H D S L LKAC ++ G+ LH A+K L S++ VG++LLDMY + G
Sbjct: 102 HAVSPDTS--VLSVVLKACGQSSNI-AYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK 158
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFS 287
+ + VF + N + +I G V G +E L F EM +TF+
Sbjct: 159 IDKSCRVFSEMPFRNAVTWTAIITGL-----VHAGRYKEGLTYFSEMSRSEELSDTYTFA 213
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
+KAC + + G+ IH + + V SL Y+ G + DG+ F + +
Sbjct: 214 IALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER 273
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
DVVSWTS+I G+ A+ + S P+E +S+ CA ++ GEQ+
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFAN 467
L G+++ + V NS + MY+ G++ SA + FQ + D++SWS +I GF
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 468 EALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
E + F M SG KP L +L+ + ++ EG R + +G+ N + +
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSL 452
Query: 528 VDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
+++ + G +++A I DD V A++ H
Sbjct: 453 INMYSKCGSIKEAS-MIFGETDRDDIVSLTAMINGYAEH 490
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 273/517 (52%), Gaps = 13/517 (2%)
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQM-LGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
NTMI F QT G+ LF ++ L + + S +K C+ GD G QI
Sbjct: 81 NTMIRAFSLSQTPCEGFR-----LFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQI 135
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
H +I D + +L+D YS + D + F+ PK D VSW + + + N +
Sbjct: 136 HGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRT 195
Query: 366 ETALSL---LRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
L L ++ + KPD + CA++ A G+Q+ + + G+S + +
Sbjct: 196 RDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLS 255
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIK 482
N+ + MY++ G +D A F + +VVSW+ +I A +GF EA+ F M GI
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKK-DYGITANVKHSTCIVDLLGRAGRLEDAK 541
P TL G+L+ACSH GLV EG+ +F+ M+ ++ I N+ H C+VDLLGRA L+ A
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAY 375
Query: 542 RFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAG 601
I D +WR LLGACRVH D +G+ + +IEL+ A YVLL N Y+ G
Sbjct: 376 SLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVG 435
Query: 602 KEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKIN 661
K ++ E+R LM+++ + +PG S IE+ VH F+VDD SHP + IY L E+ ++
Sbjct: 436 KWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Query: 662 KIEFGDEKLP--MDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDC 719
+ E ++ E G + +HSEKLA+ FGI+ P +RV KNLR C DC
Sbjct: 496 IAGYVAEITSELHNLESEEEKG-YALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDC 554
Query: 720 HVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
H K +S + R +I+RD RFHHFK G CSC D+W
Sbjct: 555 HNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 134/312 (42%), Gaps = 23/312 (7%)
Query: 66 RIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRI 125
R + LP + + + L C + +L G IHG + G +M +L+++YS C+
Sbjct: 105 RNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENS 164
Query: 126 EAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF----SDYTLGS 181
A +FD + D VSWN + + Y+R R+V L +M ++ +D T
Sbjct: 165 TDACKVFDEIPKRDTVSWNVLFSCYLR-NKRTRDVLVLFDKM-KNDVDGCVKPDGVTCLL 222
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
AL+AC +L+ GK +H + L+ + + L+ MY++ G + A VF R
Sbjct: 223 ALQACANLGALD-FGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER 281
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
N + +I+G G+ +EA+ F EM G++ + T + ++ AC G
Sbjct: 282 NVVSWTALISGLAMN-----GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAE 336
Query: 302 GRQIHAQI------CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTS 354
G ++ K NL GC +VD +D S K D W +
Sbjct: 337 GMMFFDRMRSGEFKIKPNLH---HYGC-VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRT 392
Query: 355 MIAGCVENGKFE 366
++ C +G E
Sbjct: 393 LLGACRVHGDVE 404
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 41 LFDETPQRSIISCNSPAS-----------LLAFREAR--IAGLPVSD-FTFAGVLAYCGS 86
+FDE P+R +S N S L+ F + + + G D T L C +
Sbjct: 170 VFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
L G+ +H + G+ G + + N+L++MYS+C ++ A +F E + VSW ++
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
I+G G G +E E M + G+ + TL L AC
Sbjct: 290 ISGLAMNGFG-KEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 212/681 (31%), Positives = 331/681 (48%), Gaps = 51/681 (7%)
Query: 81 LAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLI--NMYSKCKRIEAARVLFDTCDEL 138
L+ S +NLR IHG + G+D + LI S + AR L E
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGK 197
D +N+++ GY + V + M R G F D ++ +KA +SL G
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSV-AVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR-TGF 126
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
+H A+K L S++ VGT L+ MY GC+ A VF+ N +N
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWN---------- 176
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
+++ AC D R+I ++ +N
Sbjct: 177 ------------------------------AVITACFRGNDVAGAREIFDKMLVRNHTSW 206
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
++ Y G ++ R F+ P D VSW++MI G NG F + R+
Sbjct: 207 NV----MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
+G P+E ++ V+ C+ + G+ + G+ K G S + V N+ I MY++ G++
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 438 ARLTFQEIENPD-VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
ARL F+ ++ +VSW+ MI A HG EA+R+F MT G+ P+ I+ + +L ACS
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
H GL++EG YF MK+ Y I ++H C+VDL GR+G+L+ A FI ++W
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 557 RALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQ 616
R LLGAC H + + + + R+ EL+P+ + VLL N Y AGK K +RK M Q
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 617 GVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKI-NKIEFGDEKLPMDIS 675
+KK S +EVG ++ F ++ + + +L+E+++++ ++ + E
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYD 562
Query: 676 GTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKII 735
E +S HSEKLA+ F + L K A +R++KNLR+C DCH MKL SK+ +I+
Sbjct: 563 VEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEIL 622
Query: 736 LRDAIRFHHFKEGLCSCKDYW 756
+RD RFH FK+G CSC+DYW
Sbjct: 623 VRDRNRFHSFKDGSCSCRDYW 643
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 168/414 (40%), Gaps = 56/414 (13%)
Query: 58 SLLAFREARIAGLPVSD-FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLI 116
S+ F E G D F+FA V+ + R+LR G +H L G++ +FV +LI
Sbjct: 89 SVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLI 148
Query: 117 NMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD--GFREVFE-LLARMHRSGLD 173
MY C +E AR +FD + + V+WN++I R D G RE+F+ +L R H S
Sbjct: 149 GMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTS--- 205
Query: 174 FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVL 233
+L Y K G L A
Sbjct: 206 -----------------------------------------WNVMLAGYIKAGELESAKR 224
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
+F + +D ++TMI G G E+ F E+Q G++ ++ + + ++ AC
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHN-----GSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS-TPKLDVVSW 352
G F G+ +H + K V +L+D YS G++ F K +VSW
Sbjct: 280 SQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSW 339
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
TSMIAG +G+ E A+ L + A G PD S++ C+ GE +
Sbjct: 340 TSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKR 399
Query: 413 -FGISNFIIVQNSQICMYAKSGDIDSAR-LTFQEIENPDVVSWSEMICCNAHHG 464
+ I I + +Y +SG + A Q P + W ++ + HG
Sbjct: 400 VYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F E P R +S ++ S L FRE + AG+ ++ + GVL+ C + +
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELD-DVSWNSIIA 148
G+ +HG V G ++ V N+LI+MYS+C + AR++F+ E VSW S+IA
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAI 204
G G G E L M G+ + S L AC +++ + +M V I
Sbjct: 345 GLAMHGQG-EEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ ++ ++D+Y ++G L A
Sbjct: 404 EPEIEHY----GCMVDLYGRSGKLQKA 426
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 323/611 (52%), Gaps = 38/611 (6%)
Query: 37 RTLHLFDETPQRSIISC-----------NSPASLLAFREARIAGLPVSDFTFAGVLAYCG 85
+ +F P S++S ++ ++L F+E R +G+ +++ T V++ CG
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
+ +H V +G V +LI+MYSK I+ + +F+ +LDD+ +
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE---DLDDIQRQN 419
Query: 146 IIAGYV-------RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI--G 196
I+ + + G R L RM + GL ++++ S L L+C+ G
Sbjct: 420 IVNVMITSFSQSKKPGKAIR----LFTRMLQEGLRTDEFSVCSLLSV------LDCLNLG 469
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K +H +K L ++ VG++L +Y+K G L ++ +F+ + ++ + +MI+GF +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
GY REA+GLF EM G + + T ++++ C + G++IH + +
Sbjct: 530 -----GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
+G +LV+ YS GS+ + ++ P+LD VS +S+I+G ++G + L R +
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
SG D F +SS++ A + G Q+ + K G+ V +S + MY+K G ID
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
F +I PD+++W+ +I A HG ANEAL+++ LM G KP+ +T +GVL+ACS
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
HGGLV+E + M KDYGI +H C+VD LGR+GRL +A+ FI + D ++W
Sbjct: 765 HGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVW 824
Query: 557 RALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQ 616
LL AC++H + +GK A + IELEP A +Y+ L NI + G+ E RKLM+
Sbjct: 825 GTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGT 884
Query: 617 GVKKEPGISWI 627
GV+KEPG S +
Sbjct: 885 GVQKEPGWSSV 895
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 277/662 (41%), Gaps = 96/662 (14%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFD PQ ++SCN SL F + G ++ ++ V++ C + +
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQA 165
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
E + + G V ++LI+++SK R E A +F + WN+IIAG
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
+R + VF+L M YT S L AC + L GK++ IK
Sbjct: 226 ALR-NQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR-FGKVVQARVIKCGAE 283
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
++ V TA++D+YAK G + +A+ VF + + M++G+ + A AL
Sbjct: 284 -DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND-----AFSALE 337
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
+F EM+ G+ + T +S++ AC Q+HA + K D V +L+ YS
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 330 FFGSIDDGIRCF---NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
G ID + F + + ++V+ MI ++ K A+ L + + G + DEF
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Query: 387 MSSVMGV--CADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
+ S++ V C ++ G+Q+ G+ LK G+ + V +S +Y+K G ++ + FQ
Sbjct: 456 VCSLLSVLDCLNL-----GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQG 510
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS-------- 496
I D W+ MI +G+ EA+ +F M G P+ TL VLT CS
Sbjct: 511 IPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG 570
Query: 497 ---HG----GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL---------------GRA 534
HG +D+G+ + Y ++K + + D L +
Sbjct: 571 KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH 630
Query: 535 GRLEDAKRFILD---SGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL----EPHAA 587
G ++D D SGF D ++L A + ++ +G + + ++ EP
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG 690
Query: 588 ASYVLLYN----------------------------IYNDAGKEKRALEVRKLMQDQGVK 619
+S + +Y+ Y GK AL+V LM+++G K
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFK 750
Query: 620 KE 621
+
Sbjct: 751 PD 752
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 229/502 (45%), Gaps = 47/502 (9%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYV--RLGDGFREVFELLAR 166
+F+ SL++ YS + A LFDT + D VS N +I+GY RL F E ++
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRL---FEESLRFFSK 140
Query: 167 MHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
MH G + ++ + GS + AC ++ +++ IK+ VV +AL+D+++K
Sbjct: 141 MHFLGFEANEISYGSVISACSALQA-PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 227 CLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTF 286
DA VF N + +NT+IAG L+ Q LF EM + +T+
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA-----VFDLFHEMCVGFQKPDSYTY 254
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK 346
SS++ AC ++ R G+ + A++ K + D FV ++VD Y+ G + + + F+ P
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 347 LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
VVSWT M++G ++ +AL + ++ SG + + ++SV+ C + Q+
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ---EIENPDVVSWSEMICCNAHH 463
W K G V + I MY+KSGDID + F+ +I+ ++V + MI +
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQS 431
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTACS--------HGGLVDEGL--------RY 507
+A+R+F M G++ + ++ +L+ HG + GL
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 508 FEI------MKKDYGITANV--KHSTCIVDLL---GRAGRLEDAKRF---ILDSGFADDP 553
F + +++ Y + + K + C ++ G L +A +LD G + D
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 554 VMWRALLGACRVHKDTMMGKHI 575
A+L C H GK I
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEI 573
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 7/246 (2%)
Query: 298 DFRAGRQIHAQICKKNL-QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
+ R + + A + ++ L D F+ SL+ +YS GS+ D + F++ P+ DVVS MI
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
+G ++ FE +L + G + +E SV+ C+ + A E + +K G
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
+ +V+++ I +++K+ + A F++ + +V W+ +I + +F M
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGI--TANVKHSTCIVDLLGRA 534
V KP+ T VL AC+ E LR+ ++++ +V T IVDL +
Sbjct: 243 CVGFQKPDSYTYSSVLAACAS----LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKC 298
Query: 535 GRLEDA 540
G + +A
Sbjct: 299 GHMAEA 304
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 169/499 (33%), Positives = 282/499 (56%), Gaps = 7/499 (1%)
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G R+AL ++ +M + F+ S +KACV + D R GR IHAQI K+ + D+ V
Sbjct: 215 GSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVY 274
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
L+ Y G DD + F+ + +VV+W S+I+ + + +L R+
Sbjct: 275 NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIG 334
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
+++++ C+ +AA +G++I LK + + NS + MY K G+++ +R
Sbjct: 335 FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Query: 442 FQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLV 501
F + D+ SW+ M+ C A +G E + +FE M SG+ P+ IT + +L+ CS GL
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 502 DEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
+ GL FE MK ++ ++ ++H C+VD+LGRAG++++A + I F +W +LL
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 562 ACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
+CR+H + +G+ A + LEPH +YV++ NIY DA ++R++M+ +GVKKE
Sbjct: 515 SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 574
Query: 622 PGISWIEVGSKVHMFLV----DDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGT 677
G SW++V K+ +F+ + R+ + +++ L+E + K L T
Sbjct: 575 AGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEET 634
Query: 678 ELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILR 737
+ N + G HSE+LA T+ +I + P+R+ KNLRVC+DCH MK++S++ +R I+LR
Sbjct: 635 KANWVCG---HSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLR 691
Query: 738 DAIRFHHFKEGLCSCKDYW 756
D RFHHF +G+CSCKDYW
Sbjct: 692 DTKRFHHFVDGICSCKDYW 710
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 174/390 (44%), Gaps = 13/390 (3%)
Query: 111 VMNSLINMYSKCKRIEAARVLFDTCDE---LDDVSWNSIIAGYVRLGDGFREVFELLARM 167
+++ LI ++S C+R++ AR +FD + L + W ++ GY R G R+ + M
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSP-RDALIVYVDM 227
Query: 168 HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
S ++ ++++ ALKAC K L +G+ +H +K + VV LL +Y ++G
Sbjct: 228 LCSFIEPGNFSISVALKACVDLKDLR-VGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGL 286
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFS 287
DA VF+ N +N++I+ ++ V E LF +MQ + S T +
Sbjct: 287 FDDARKVFDGMSERNVVTWNSLISVLSKKVRV-----HEMFNLFRKMQEEMIGFSWATLT 341
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
+I+ AC + G++IHAQI K + D + SL+D Y G ++ R F+
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI- 406
D+ SW M+ NG E ++L + SG PD +++ C+D G +
Sbjct: 402 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF 461
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHG 464
+ +F +S + + + ++G I A + + P W ++ C H
Sbjct: 462 ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTA 494
+ + EL + P + ++ + A
Sbjct: 522 VSVGEIAAKELFVLEPHNPGNYVMVSNIYA 551
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 20/332 (6%)
Query: 74 DFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD 133
+F+ + L C ++LR+G IH ++ V N L+ +Y + + AR +FD
Sbjct: 236 NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFD 295
Query: 134 TCDELDDVSWNSII---AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
E + V+WNS+I + VR+ E+F L +M + FS TL + L AC
Sbjct: 296 GMSERNVVTWNSLISVLSKKVRV----HEMFNLFRKMQEEMIGFSWATLTTILPACSRVA 351
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMI 250
+L GK +H +K ++ + +L+DMY K G + + VF+ + +N M+
Sbjct: 352 AL-LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 251 AGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
+ G E + LF M G+ TF +++ C G G + ++
Sbjct: 411 NCYAIN-----GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM- 464
Query: 311 KKNLQCD---EFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFE 366
K + E C LVD G I + ++ + P K W S++ C +G
Sbjct: 465 KTEFRVSPALEHYAC-LVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVS 523
Query: 367 TA-LSLLRQFMASGRKPDEFIMSSVMGVCADM 397
++ F+ P ++M S + A M
Sbjct: 524 VGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 41 LFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD +R++++ NS S+L+ FR+ + + S T +L C
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G+ IH +L + + ++NSL++MY KC +E +R +FD D SWN ++
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG-KMLHVCAIKLDL 208
Y G+ EV L M SG+ T AL + C D L G + + +
Sbjct: 413 YAINGN-IEEVINLFEWMIESGVAPDGITF-VALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
+ + L+D+ + G + +AV V E+ +
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/515 (35%), Positives = 273/515 (53%), Gaps = 8/515 (1%)
Query: 244 FMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGR 303
F +NTMI G++ + EAL + EM G FT+ ++KAC + R G+
Sbjct: 98 FDFNTMIRGYVNVMSFE-----EALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
QIH Q+ K L+ D FV SL++ Y G ++ F SW+SM++ G
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 364 KFETALSLLRQFMA-SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF-IIV 421
+ L L R + + K +E M S + CA+ A G I G+ L+ IS IIV
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR-NISELNIIV 271
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
Q S + MY K G +D A FQ++E + +++S MI A HG ALR+F M G+
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL 331
Query: 482 KPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
+P+H+ + VL ACSH GLV EG R F M K+ + +H C+VDLLGRAG LE+A
Sbjct: 332 EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEAL 391
Query: 542 RFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAG 601
I + V+WR L CRV ++ +G+ A +++L H Y+L+ N+Y+
Sbjct: 392 ETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Query: 602 KEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKIN 661
R + +G+K+ PG S +E+ K H F+ DRSHP + IY L +M ++
Sbjct: 452 MWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
Query: 662 KIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHV 721
+ + + ++ E + HS+K+A+ FG++ P + +++ +NLR+CSDCH
Sbjct: 512 FEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHT 571
Query: 722 TMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K IS + +R+I++RD RFH FK G CSCKDYW
Sbjct: 572 YTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 174/370 (47%), Gaps = 21/370 (5%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L + E G +FT+ +L C +++R G+ IHG V G++ +FV NSLIN
Sbjct: 116 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLIN 175
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLAR--MHRSGLDFS 175
MY +C +E + +F+ + SW+S+++ R G G LL R + L
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSA--RAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
+ + SAL AC +LN +G +H ++ N++V T+L+DMY K GCL A+ +F
Sbjct: 234 ESGMVSALLACANTGALN-LGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIF 292
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA 295
+ N+ Y+ MI+G G AL +F +M GL + S++ AC
Sbjct: 293 QKMEKRNNLTYSAMISGLALH-----GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSH 347
Query: 296 IGDFRAGRQIHAQICK--KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP--KLDVVS 351
G + GR++ A++ K K E GC LVD G +++ + S P K DV+
Sbjct: 348 SGLVKEGRRVFAEMLKEGKVEPTAEHYGC-LVDLLGRAGLLEEALETIQSIPIEKNDVI- 405
Query: 352 WTSMIAGCVENGKFETALSLLRQFMA-SGRKPDEFIMSSVM----GVCADMAAARSGEQI 406
W + ++ C E ++ + S P ++++ S + + D+A R+ I
Sbjct: 406 WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAI 465
Query: 407 QGWALKFGIS 416
+G G S
Sbjct: 466 KGLKQTPGFS 475
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 317 bits (813), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 312/602 (51%), Gaps = 9/602 (1%)
Query: 57 ASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLI 116
+SL + A+ + + +F G L C + N G IH V+ G+ +V SL+
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 117 NMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD 176
+MYSKC + A +F + WN+++A Y G+ +L M + +
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY-SALDLFGFMRQKSVLPDS 373
Query: 177 YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFE 236
+TL + + +CC L GK +H K + S + +ALL +Y+K GC DA LVF+
Sbjct: 374 FTLSNVI-SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML--GLNCSKFTFSSIVKACV 294
S + + ++I+G + G +EAL +F +M+ L +S+ AC
Sbjct: 433 SMEEKDMVAWGSLISGLCKN-----GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
+ R G Q+H + K L + FVG SL+D YS G + ++ F S ++V+W S
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNS 547
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG 414
MI+ N E ++ L ++ G PD ++SV+ + A+ G+ + G+ L+ G
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFE 474
I + ++N+ I MY K G A F+++++ +++W+ MI HG AL +F+
Sbjct: 608 IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA 534
M +G P+ +T L +++AC+H G V+EG FE MK+DYGI N++H +VDLLGRA
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 535 GRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLY 594
G LE+A FI D +W LL A R H + +G A++++ +EP ++YV L
Sbjct: 728 GLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 787
Query: 595 NIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLE 654
N+Y +AG + A ++ LM+++G+ K+PG SWIEV + ++F S PM I++ L
Sbjct: 788 NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLN 847
Query: 655 EM 656
+
Sbjct: 848 RL 849
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 19/500 (3%)
Query: 72 VSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVL 131
S FTF +L C + NL G+ IHGSV+V G F+ SL+NMY KC ++ A +
Sbjct: 58 TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 132 FDTCDE-------LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALK 184
FD + D WNS+I GY + F+E RM G+ ++L +
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRR-FKEGVGCFRRMLVFGVRPDAFSLSIVVS 176
Query: 185 ACCVDKSLNCI-GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF-ESFRYHN 242
C + + GK +H ++ L+++ + TAL+DMY K G DA VF E N
Sbjct: 177 VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSN 236
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
++N MI GF G +L L+ + + +F+ + AC + G
Sbjct: 237 VVLWNVMIVGF-----GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFG 291
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
RQIH + K L D +V SL+ YS G + + F+ + W +M+A EN
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
+AL L PD F +S+V+ C+ + G+ + K I + ++
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT--VSG 480
++ + +Y+K G A L F+ +E D+V+W +I +G EAL++F M
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 481 IKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
+KP+ + V AC+ + GL+ M K G+ NV + ++DL + G E A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 541 KRFILDSGFADDPVMWRALL 560
+ + S ++ V W +++
Sbjct: 531 LK-VFTSMSTENMVAWNSMI 549
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 211/690 (30%), Positives = 340/690 (49%), Gaps = 66/690 (9%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD 136
F ++ C T +LR +H +L G+ V L++ S K + + +F +
Sbjct: 32 FISLIHACKDTASLR---HVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E + N++I G F M R G+ T LK+ +G
Sbjct: 88 ERNPFVLNALIRGLTE-NARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS-KLGFRWLG 145
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES----FRYHNDFMYNTMIAG 252
+ LH +K ++ + V +L+DMYAKTG L A VFE + + ++N +I G
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 253 FLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK 312
+ + + + A LF M + ++S+++K V G+ +Q+
Sbjct: 206 YCRAKDMHM-----ATTLFRSMP----ERNSGSWSTLIKGYVDSGELNRAKQL------- 249
Query: 313 NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
F P+ +VVSWT++I G + G +ETA+S
Sbjct: 250 ----------------------------FELMPEKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS 432
+ + G KP+E+ +++V+ C+ A SG +I G+ L GI + + + MYAK
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 433 GDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVL 492
G++D A F + + D++SW+ MI A HG ++A++ F M SG KP+ + L VL
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 493 TACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADD 552
TAC + VD GL +F+ M+ DY I +KH +VDLLGRAG+L +A + + D
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 553 PVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGK----EKRALE 608
W AL AC+ HK + ++ ++EL+P SY+ L + G EKR L
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLS 521
Query: 609 VRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEML-VKINK-IEFG 666
++K ++++ + G S+IE+ +++ F D SH ++Q I +L+E++ + I K G
Sbjct: 522 LQKRIKERSL----GWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPG 577
Query: 667 DEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLI 726
+ DI E + G+ HSEKLA+T G + +R+IKNLR+C DCH MK +
Sbjct: 578 ADWSIHDIEEEEKENVTGI--HSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYV 635
Query: 727 SKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
SK+ +R I+LRDA +FHHFK+G CSC DYW
Sbjct: 636 SKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 23/245 (9%)
Query: 36 TRTLHLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYC 84
R LF+ P+++++S + ++ + E GL +++T A VL+ C
Sbjct: 244 NRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
+ L G IHG +L G+ + +L++MY+KC ++ A +F + D +SW
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWT 363
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLH 200
++I G+ G F + + +M SG + + L AC VD LN M
Sbjct: 364 AMIQGWAVHGR-FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRL 422
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS 260
AI+ L ++V +D+ + G L +A + E+ + D T A +
Sbjct: 423 DYAIEPTLKHYVLV----VDLLGRAGKLNEAHELVENMPINPDL---TTWAALYRACKAH 475
Query: 261 CGYAR 265
GY R
Sbjct: 476 KGYRR 480
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/480 (37%), Positives = 269/480 (56%), Gaps = 15/480 (3%)
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS 343
T S +KAC A Q+H QI ++ L D + +L+D YS G + + F+
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
P DV SW ++IAG V + A+ L ++ G + E + + +G C+ + + G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 404 EQI-QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICCNA 461
E I G++ ++ +IV N+ I MY+K G +D A F++ VV+W+ MI A
Sbjct: 230 ENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 462 HHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
HG A+ AL IF+ + +GIKP+ ++ L LTAC H GLV+ GL F M G+ N+
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNM 343
Query: 522 KHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE 581
KH C+VDLL RAGRL +A I DPV+W++LLGA ++ D M + + + E
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 582 LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDR 641
+ + +VLL N+Y G+ K VR M+ + VKK PG+S+IE +H F D+
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDK 463
Query: 642 SHPMSQLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNGIVGMSHHSEKLAVTFGII 699
SH + IY +++E+ KI + + + + DI E + +HSEKLAV +G++
Sbjct: 464 SHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKEN--ALCYHSEKLAVAYGLM 521
Query: 700 SL---PKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+ + +PVRVI NLR+C DCHV K ISK+ KR+II+RD +RFH FK+G CSC+D+W
Sbjct: 522 MMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 16/300 (5%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ +H + G+ + +L++ YSK + +A LFD D SWN++IAG V
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS- 187
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
G+ E EL RM G+ S+ T+ +AL AC + + H + N N++
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVI 242
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFC 272
V A +DMY+K G + A VFE F + +NTMI GF G A AL +F
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH-----GEAHRALEIFD 297
Query: 273 EMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD-EFVGCSLVDFYSFF 331
+++ G+ ++ + + AC G G + + K ++ + + GC +VD S
Sbjct: 298 KLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGC-VVDLLSRA 356
Query: 332 GSIDDGIRCFNSTPKL-DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD-EFIMSS 389
G + + S + D V W S++ E A R+ G D +F++ S
Sbjct: 357 GRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLS 416
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 14/300 (4%)
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR------KP 382
S FG + ++ F PK W ++I G + A S R + +
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
D S + CA + + +Q+ + G+S ++ + + Y+K+GD+ SA F
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 443 QEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD 502
E+ DV SW+ +I A+EA+ +++ M GI+ + +T++ L ACSH G V
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 503 EGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
EG F D NV S +D+ + G ++ A + V W ++
Sbjct: 228 EGENIFHGYSND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 563 CRVHKDTMMGKHIADRVIE--LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKK 620
VH + I D++ + ++P SY+ AG + L V M +GV++
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPD-DVSYLAALTACRHAGLVEYGLSVFNNMACKGVER 341
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFDE P R + S N + ++ ++ G+ S+ T L C +
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 90 LRLGEAI-HGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT-CDELDDVSWNSII 147
++ GE I HG + + V N+ I+MYSKC ++ A +F+ + V+WN++I
Sbjct: 226 VKEGENIFHGY-----SNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
G+ G+ R E+ ++ +G+ D + +AL AC
Sbjct: 281 TGFAVHGEAHR-ALEIFDKLEDNGIKPDDVSYLAALTAC 318
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 303/577 (52%), Gaps = 8/577 (1%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
FTF V+ G+ LG IH V+ +G + V +SL+ MY+K E + +FD
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
E D SWN++I+ + + G+ + EL RM SG + + +L A+ AC L
Sbjct: 168 MPERDVASWNTVISCFYQSGEA-EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE- 225
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
GK +H +K + V +AL+DMY K CL A VF+ + +N+MI G++
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
+ G ++ + + M + G S+ T +SI+ AC + G+ IH + + +
Sbjct: 286 AK-----GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVV 340
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
D +V CSL+D Y G + F+ T K SW MI+ + G + A+ + Q
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
++ G KPD +SV+ C+ +AA G+QI + + ++ ++ + MY+K G+
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
A F I DVVSW+ MI HG EAL F+ M G+KP+ +TLL VL+A
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSG-FADDP 553
C H GL+DEGL++F M+ YGI ++H +C++D+LGRAGRL +A I + +D+
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 580
Query: 554 VMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLM 613
+ L AC +H + +G IA ++E P A++Y++L+N+Y A VR M
Sbjct: 581 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 640
Query: 614 QDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIY 650
++ G++K+PG SWIE+ KV F +DRSH ++ +Y
Sbjct: 641 KEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 236/484 (48%), Gaps = 11/484 (2%)
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVS-W 143
ST++LR + +H +L G+ + + SLIN+Y CK +AR +F+ D DV W
Sbjct: 15 NSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIW 74
Query: 144 NSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHVC 202
NS+++GY + F + E+ R+ + D +T + +KA +G+M+H
Sbjct: 75 NSLMSGYSK-NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA-LGREFLGRMIHTL 132
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
+K ++VV ++L+ MYAK +++ VF+ + +NT+I+ F Q G
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS-----G 187
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
A +AL LF M+ G + + + + AC + G++IH + KK + DE+V
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
+LVD Y ++ F P+ +V+W SMI G V G ++ + +L + + G +P
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
+ ++S++ C+ G+ I G+ ++ ++ I V S I +Y K G+ + A F
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 443 QEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD 502
+ + SW+ MI G +A+ +++ M G+KP+ +T VL ACS ++
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 503 EGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
+G + + + + + + ++D+ + G ++A R I +S D V W ++ A
Sbjct: 428 KG-KQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR-IFNSIPKKDVVSWTVMISA 485
Query: 563 CRVH 566
H
Sbjct: 486 YGSH 489
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 30/456 (6%)
Query: 38 TLHLFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGS 86
+L +FDE P+R + S N+ S L F +G + + ++ C
Sbjct: 161 SLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR 220
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
L G+ IH + G + +V ++L++MY KC +E AR +F V+WNS+
Sbjct: 221 LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSM 280
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
I GYV GD + E+L RM G S TL S L AC ++L GK +H I+
Sbjct: 281 IKGYVAKGDS-KSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL-LHGKFIHGYVIRS 338
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
+N+++ V +L+D+Y K G A VF + +N MI+ + +S G +
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY-----ISVGNWFK 393
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A+ ++ +M +G+ TF+S++ AC + G+QIH I + L+ DE + +L+D
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
YS G+ + R FNS PK DVVSWT MI+ +G+ AL + G KPD
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 387 MSSVMGVCADMAAARSG----EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
+ +V+ C G Q++ K+GI I + I + ++G + A
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRS---KYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Query: 443 QEI----ENPDVVSWSEMICC-NAHHGFANEALRIF 473
Q+ +N +++S CC + H + R+
Sbjct: 571 QQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLL 606
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 309/580 (53%), Gaps = 17/580 (2%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREV---FELLA 165
+ V NSL+++Y+KC ++ A LFD D +S N + G++R RE F LL
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLR----NRETESGFVLLK 145
Query: 166 RMHRSGLDFSDYTLGSALKACCVDKSLNC-IGKMLHVCAIKLDLNSNMVVGTALLDMYAK 224
RM SG F TL L C D C + KM+H AI + + VG L+ Y K
Sbjct: 146 RMLGSG-GFDHATLTIVLSVC--DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFK 202
Query: 225 TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKF 284
GC VF+ + N +I+G ++ + + L LF M+ ++ +
Sbjct: 203 CGCSVSGRGVFDGMSHRNVITLTAVISGLIENE-----LHEDGLRLFSLMRRGLVHPNSV 257
Query: 285 TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST 344
T+ S + AC G+QIHA + K ++ + + +L+D YS GSI+D F ST
Sbjct: 258 TYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST 317
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
++D VS T ++ G +NG E A+ + + +G + D ++S+V+GV + G+
Sbjct: 318 TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGK 377
Query: 405 QIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHG 464
Q+ +K S V N I MY+K GD+ ++ F+ + + VSW+ MI A HG
Sbjct: 378 QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
AL+++E MT +KP +T L +L ACSH GL+D+G MK+ +GI +H
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY 497
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEP 584
TCI+D+LGRAG L++AK FI D +W+ALLGAC H DT +G++ A+++ + P
Sbjct: 498 TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHP 644
++++++L+ NIY+ GK K + K M+ GV KE GIS IE+ K H F+V+D+ HP
Sbjct: 558 DSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHP 617
Query: 645 MSQLIYSRLEEML-VKINKIEFGDEKLPMDISGTELNGIV 683
++ IY L + V +++ D++ + +G + NG V
Sbjct: 618 QAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRNGTV 657
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 185/441 (41%), Gaps = 25/441 (5%)
Query: 39 LHLFDETPQRSIISCNSP-ASLLAFREA--------RIAGLPVSDF-TFAGVLAYCGSTR 88
+ LFDE P R +IS N L RE R+ G D T VL+ C +
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPE 169
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+ + IH +++G D I V N LI Y KC + R +FD + ++ ++I+
Sbjct: 170 FCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVIS 229
Query: 149 GYVR---LGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
G + DG R L + M R + + T SAL AC + + G+ +H K
Sbjct: 230 GLIENELHEDGLR----LFSLMRRGLVHPNSVTYLSALAACSGSQRI-VEGQQIHALLWK 284
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
+ S + + +AL+DMY+K G + DA +FES ++ ++ G Q G
Sbjct: 285 YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQN-----GSEE 339
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
EA+ F M G+ S+++ G+Q+H+ + K+ + FV L+
Sbjct: 340 EAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLI 399
Query: 326 DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEF 385
+ YS G + D F PK + VSW SMIA +G AL L + KP +
Sbjct: 400 NMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDV 459
Query: 386 IMSSVMGVCADMAAARSGEQIQGWALKF-GISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
S++ C+ + G ++ + GI I M ++G + A+
Sbjct: 460 TFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDS 519
Query: 445 IE-NPDVVSWSEMICCNAHHG 464
+ PD W ++ + HG
Sbjct: 520 LPLKPDCKIWQALLGACSFHG 540
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 173/375 (46%), Gaps = 27/375 (7%)
Query: 41 LFDETPQRSIISCNSPASLLAFREARIAGLPV-----------SDFTFAGVLAYCGSTRN 89
+FD R++I+ + S L E GL + + T+ LA C ++
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ G+ IH + G++ + + ++L++MYSKC IE A +F++ E+D+VS I+ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
+ G E + RM ++G++ + + L +D SL +GK LH IK +
Sbjct: 332 LAQNGSE-EEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLG-LGKQLHSLVIKRKFS 389
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
N V L++MY+K G LTD+ VF N +N+MIA F + G+ AL
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH-----GHGLAALK 444
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN--LQCDEFVGCSLVDF 327
L+ EM L + + TF S++ AC +G GR++ ++ + + E C ++D
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC-IIDM 503
Query: 328 YSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
G + + +S P K D W +++ C +G E Q + PD
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA--PDS-- 559
Query: 387 MSSVMGVCADMAAAR 401
SS + A++ ++R
Sbjct: 560 -SSAHILIANIYSSR 573
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 309/588 (52%), Gaps = 13/588 (2%)
Query: 74 DFTFAGVLAYCGSTRNLRLGEAIHGSV---LVTGMDGMIFVMNSLINMYSKCKRIEAARV 130
+FT L CG R + GE IHG V + G D ++V +SLI MY KC R+ A
Sbjct: 60 NFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSD--LYVGSSLIYMYIKCGRMIEALR 117
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
+FD ++ D V+W+S+++G+ + G ++ V E RM + D L + C
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAV-EFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMI 250
S + +G+ +H I+ ++++ + +LL+ YAK+ +AV +F+ + ++T+I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 251 AGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
A ++Q G A EAL +F +M G + T +++AC A D GR+ H
Sbjct: 237 ACYVQN-----GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 291
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALS 370
+K L+ + V +LVD Y S ++ F+ P+ DVVSW ++I+G NG ++
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIE 351
Query: 371 LLR-QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY 429
+ + +PD +M V+G C+++ + + +K+G + + S + +Y
Sbjct: 352 EFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELY 411
Query: 430 AKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITL 488
++ G + +A F I D V W+ +I HG +AL F M S +KPN +T
Sbjct: 412 SRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTF 471
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSG 548
L +L+ACSH GL+ EGLR F++M DY + N++H +VDLLGR G L+ A
Sbjct: 472 LSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Query: 549 FADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALE 608
F+ P + LLGACR+H++ M + +A ++ ELE + A Y+L+ N+Y G+ + +
Sbjct: 532 FSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEK 591
Query: 609 VRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
+R ++ +G+KK S IE+ KVH F+ DD HP + +Y L+E+
Sbjct: 592 LRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 233/493 (47%), Gaps = 18/493 (3%)
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
AR +F + WN+++ R + EV + M R ++TL ALKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSR-EKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 188 VDKSLNCIGKMLHVCAIK-LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
+ +N G+M+H K + L S++ VG++L+ MY K G + +A+ +F+ + +
Sbjct: 72 ELREVN-YGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTFSSIVKACVAIGDFRAGRQI 305
++M++GF + G +A+ F M M + + T ++V AC + + R GR +
Sbjct: 131 SSMVSGFEKN-----GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
H + ++ D + SL++ Y+ + + + F + DV+SW+++IA V+NG
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
AL + M G +P+ + V+ CA G + A++ G+ + V +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV-SGIKPN 484
+ MY K + A F I DVVSW +I +G A+ ++ F +M + + +P+
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI 544
I ++ VL +CS G +++ + + K YG +N +V+L R G L +A +
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 545 LDSGFA-DDPVMWRALLGACRVHKDTMMGKHIADRVI---ELEPHAAASYVLLYNIYNDA 600
+G A D V+W +L+ +H + ++ E++P+ +++ + + + A
Sbjct: 425 --NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN-EVTFLSILSACSHA 481
Query: 601 GKEKRALEVRKLM 613
G L + KLM
Sbjct: 482 GLIHEGLRIFKLM 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
F S D + F K + W +++ ++E L KPD F +
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 391 MGVCADMAAARSGEQIQGWALK-FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD 449
+ C ++ GE I G+ K + + + V +S I MY K G + A F E+E PD
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 450 VVSWSEMICCNAHHGFANEALRIFELMTV-SGIKPNHITLLGVLTACS 496
+V+WS M+ +G +A+ F M + S + P+ +TL+ +++AC+
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 151/363 (41%), Gaps = 32/363 (8%)
Query: 49 SIISC---NSPAS--LLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVT 103
++I+C N A+ LL F + G + T VL C + +L G H +
Sbjct: 234 TVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK 293
Query: 104 GMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFE- 162
G++ + V +L++MY KC E A +F D VSW ++I+G+ G R + E
Sbjct: 294 GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEF 353
Query: 163 ---LLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALL 219
LL R LGS C + K H IK +SN +G +L+
Sbjct: 354 SIMLLENNTRPDAILMVKVLGS-----CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLV 408
Query: 220 DMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM-QMLG 278
++Y++ G L +A VF + ++ ++I G+ G +AL F M +
Sbjct: 409 ELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH-----GKGTKALETFNHMVKSSE 463
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK-NLQCDEFVGCSLVDFYSFFGSIDDG 337
+ ++ TF SI+ AC G G +I + L + LVD G +D
Sbjct: 464 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
Query: 338 IRC-----FNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF--MASGRKPDEFIMSSV 390
I F+ TP++ +++ C + E A ++ ++ + S +MS+V
Sbjct: 524 IEITKRMPFSPTPQI----LGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNV 579
Query: 391 MGV 393
GV
Sbjct: 580 YGV 582
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 309 bits (792), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 182/574 (31%), Positives = 305/574 (53%), Gaps = 22/574 (3%)
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
+LH +KL S+ L+ Y K + A +F+ N + ++I+G+
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY---- 105
Query: 258 TVSCGYAREALGLFCEM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G + AL +F +M + + +++TF+S+ KAC A+ + R G+ IHA++ L+
Sbjct: 106 -NDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRR 164
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL--DVVSWTSMIAGCVENGKFETALSLLRQ 374
+ V SLVD Y ++ R F+S +VVSWTSMI +N + A+ L R
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 375 FMA--SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS 432
F A + + ++F+++SV+ C+ + + G+ G + G + +V S + MYAK
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKC 284
Query: 433 GDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVL 492
G + A F I V+S++ MI A HG A+++F+ M I PN++TLLGVL
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVL 344
Query: 493 TACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF--ILDSGFA 550
ACSH GLV+EGL Y +M + YG+ + +H TC+VD+LGR GR+++A ++ G
Sbjct: 345 HACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAE 404
Query: 551 DDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVR 610
++W ALL A R+H + + R+I+ ++Y+ L N Y +G + + +R
Sbjct: 405 QGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Query: 611 KLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK-------- 662
M+ G KE SWIE V++F D S S I L+++ ++ +
Sbjct: 465 LEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSS 524
Query: 663 IEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVT 722
+ + +D+ + +V + H E+LA+ +G++ LP + +R++ NLR+C DCH
Sbjct: 525 MITTSSSVFVDVDEEAKDEMVSL--HCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEA 582
Query: 723 MKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
KLIS++ +R+I++RD RFH FK G C+C+DYW
Sbjct: 583 FKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 187/440 (42%), Gaps = 21/440 (4%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD 155
+H L G F +N L+ Y K K I AR LFD E + VSW S+I+GY +G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 156 GFREVFELLARMHRS-GLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVV 214
+ + +MH + ++YT S KAC + + IGK +H L N+VV
Sbjct: 111 P-QNALSMFQKMHEDRPVPPNEYTFASVFKACSA-LAESRIGKNIHARLEISGLRRNIVV 168
Query: 215 GTALLDMYAKTGCLTDAVLVFESFRYH--NDFMYNTMIAGFLQRQTVSCGYAREALGLFC 272
++L+DMY K + A VF+S + N + +MI + Q EA+ LF
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQN-----ARGHEAIELFR 223
Query: 273 EMQ--MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
+ ++F +S++ AC ++G + G+ H + + + + V SL+D Y+
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAK 283
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
GS+ + F V+S+TSMI ++G E A+ L + +A P+ + V
Sbjct: 284 CGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGV 343
Query: 391 MGVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE--- 446
+ C+ G E + A K+G+ + M + G +D A + IE
Sbjct: 344 LHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGA 403
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
+ W ++ HG + I + I+ N + A S+ V G
Sbjct: 404 EQGALLWGALLSAGRLHG----RVEIVSEASKRLIQSNQ-QVTSAYIALSNAYAVSGGWE 458
Query: 507 YFEIMKKDYGITANVKHSTC 526
E ++ + + NVK C
Sbjct: 459 DSESLRLEMKRSGNVKERAC 478
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 162/362 (44%), Gaps = 29/362 (8%)
Query: 41 LFDETPQRSIISCNS----------PASLLAFREARIAGLPV--SDFTFAGVLAYCGSTR 88
LFDE + +++S S P + L+ + PV +++TFA V C +
Sbjct: 86 LFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALA 145
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL--DDVSWNSI 146
R+G+ IH + ++G+ I V +SL++MY KC +E AR +FD+ + VSW S+
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLD---FSDYTLGSALKACCVDKSLNCIGKMLHVCA 203
I Y + G E EL R + L + + L S + AC L GK+ H
Sbjct: 206 ITAYAQNARG-HEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQW-GKVAHGLV 262
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGY 263
+ SN VV T+LLDMYAK G L+ A +F R H+ Y +MI + G
Sbjct: 263 TRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKH-----GL 317
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK-NLQCDEFVGC 322
A+ LF EM +N + T ++ AC G G + + + +K + D
Sbjct: 318 GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT 377
Query: 323 SLVDFYSFFGSIDDGI---RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASG 379
+VD FG +D+ + + + W ++++ +G+ E ++ + S
Sbjct: 378 CVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
Query: 380 RK 381
++
Sbjct: 438 QQ 439
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 294/543 (54%), Gaps = 11/543 (2%)
Query: 114 SLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLD 173
+LI Y + +E AR LFD + D V+W ++I GY R +E M + G
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNAR-AWECFHEMVKQGTS 108
Query: 174 FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV- 232
+++TL S LK+C K L G ++H +KL + ++ V A+++MYA +A
Sbjct: 109 PNEFTLSSVLKSCRNMKVL-AYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
L+F + ND + T+I GF G L ++ +M + + + + V+A
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTH-----LGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
+I G+QIHA + K+ Q + V S++D Y G + + F+ D+++W
Sbjct: 223 SASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
++I+ +E AL + ++F + G P+ + +S++ CA++AA G+Q+ G +
Sbjct: 283 NTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEI-ENPDVVSWSEMICCNAHHGFANEALR 471
G + + + N+ I MYAK G+I ++ F EI + ++VSW+ M+ HG+ EA+
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
+F+ M SGI+P+ I + VL+AC H GLV++GL+YF +M+ +YGI + C+VDLL
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 532 GRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK-DTMMGKHIADRVIELEPHAAASY 590
GRAG++ +A + F D W A+LGAC+ HK + ++ + A +V+EL+P +Y
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTY 521
Query: 591 VLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIY 650
V+L IY GK VRK+M+ G KKE G+SWI V ++V F V D+ P + +Y
Sbjct: 522 VMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVY 581
Query: 651 SRL 653
S L
Sbjct: 582 SVL 584
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 225/471 (47%), Gaps = 32/471 (6%)
Query: 12 PFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLA---------- 61
P+ P K L T + + LFDE P R +++ + + A
Sbjct: 38 PYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWE 97
Query: 62 -FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYS 120
F E G ++FT + VL C + + L G +HG V+ GM+G ++V N+++NMY+
Sbjct: 98 CFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 121 KCK-RIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTL 179
C +EAA ++F +DV+W ++I G+ LGDG + ++ +M + + Y +
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL-KMYKQMLLENAEVTPYCI 216
Query: 180 GSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
A++A S+ GK +H IK SN+ V ++LD+Y + G L++A F
Sbjct: 217 TIAVRASASIDSVTT-GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME 275
Query: 240 YHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF 299
+ +NT+I+ L+R S EAL +F + G + +TF+S+V AC I
Sbjct: 276 DKDLITWNTLISE-LERSDSS-----EALLMFQRFESQGFVPNCYTFTSLVAACANIAAL 329
Query: 300 RAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS-TPKLDVVSWTSMIAG 358
G+Q+H +I ++ + + +L+D Y+ G+I D R F + ++VSWTSM+ G
Sbjct: 330 NCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIG 389
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISN 417
+G A+ L + ++SG +PD + +V+ C G + ++GI+
Sbjct: 390 YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINP 449
Query: 418 FIIVQNSQICMYAKSGDIDSA-----RLTFQEIENPDVVSWSEMI-CCNAH 462
+ N + + ++G I A R+ F+ PD +W ++ C AH
Sbjct: 450 DRDIYNCVVDLLGRAGKIGEAYELVERMPFK----PDESTWGAILGACKAH 496
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 202/625 (32%), Positives = 296/625 (47%), Gaps = 89/625 (14%)
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
+ S I +K RI +AR +FD ELD V+WN+++ Y RLG +E L ++ S
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGL-HQEAIALFTQLRFSD 65
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
DY+ + L C ++ G+ + I+ +++ V +L+DMY K A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVK-FGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 232 VLVFES---------------FRYHN------------------DFMYNTMIAGFLQRQT 258
VF F Y N F +N MI+G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH--- 181
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA-IGDFRAGRQIHAQICKKNLQCD 317
CG L LF EM +TFSS++ AC A + GR +HA + K
Sbjct: 182 --CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSA 239
Query: 318 EFVGCSLVDFYSFFGSIDDGIR-------------------------------CFNSTPK 346
S++ FY+ GS DD +R F+ P+
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE 299
Query: 347 LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
++V+WT+MI G NG E AL + M SG D F +V+ C+ +A G+ I
Sbjct: 300 KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI 359
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFA 466
G + G + V N+ + +YAK GDI A F +I N D+VSW+ M+ HG A
Sbjct: 360 HGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLA 419
Query: 467 NEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTC 526
++AL++++ M SGIKP+++T +G+LT CSH GLV+EG FE M KDY I V H TC
Sbjct: 420 DQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTC 479
Query: 527 IVDLLGRAGRLEDAK-------RFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRV 579
++D+ GR G L +AK + DS + W LLGAC H T +G+ ++ +
Sbjct: 480 MIDMFGRGGHLAEAKDLATTYSSLVTDS---SNNSSWETLLGACSTHWHTELGREVSKVL 536
Query: 580 IELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVD 639
EP S+VLL N+Y G+ K +VR+ M ++G+KK PG SWIEVG++V F+V
Sbjct: 537 KIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVG 596
Query: 640 DRSHPMSQLIYSRLEEMLVKINKIE 664
D SHP RLEE+ +N ++
Sbjct: 597 DSSHP-------RLEELSETLNCLQ 614
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 168/434 (38%), Gaps = 71/434 (16%)
Query: 40 HLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+FD P+ ++ N+ ++ F + R + D++F +L+ C S
Sbjct: 25 QVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLG 84
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT--CDELDDVS---- 142
N++ G I V+ +G + V NSLI+MY KC +A +F CD ++V+
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 143 ---------------------------WNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
WN +I+G+ G L M S
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK-LESCLSLFKEMLESEFKPD 203
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
YT S + AC D S G+M+H +K +S + ++L Y K G DA+
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMREL 263
Query: 236 ESFRYHNDFMYNTMI---------------------AGFLQRQTVSCGYAR-----EALG 269
ES +N++I + T+ GY R +AL
Sbjct: 264 ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
F EM G++ F + +++ AC + G+ IH + Q +VG +LV+ Y+
Sbjct: 324 FFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYA 383
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
G I + R F D+VSW +M+ +G + AL L +ASG KPD
Sbjct: 384 KCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIG 443
Query: 390 VMGVCADMAAARSG 403
++ C+ G
Sbjct: 444 LLTTCSHSGLVEEG 457
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 148/377 (39%), Gaps = 63/377 (16%)
Query: 39 LHLFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGS- 86
L +F E P+R + N S L F+E + +TF+ ++ C +
Sbjct: 158 LDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSAD 217
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
+ N+ G +H +L G + NS+++ Y+K + A ++ + L VSWNSI
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 147 -------------------------------IAGYVRLGDGFREVFELLARMHRSGLDFS 175
I GY R GDG + M +SG+D
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG-EQALRFFVEMMKSGVDSD 336
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
+ G+ L AC +L GKM+H C I VG AL+++YAK G + +A F
Sbjct: 337 HFAYGAVLHACS-GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA 295
+ +NTM+ F G A +AL L+ M G+ TF ++ C
Sbjct: 396 GDIANKDLVSWNTMLFAFGVH-----GLADQALKLYDNMIASGIKPDNVTFIGLLTTCSH 450
Query: 296 IGDFRAGRQIHAQICKK---NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
G G I + K L+ D V C ++D + G + + K ++
Sbjct: 451 SGLVEEGCMIFESMVKDYRIPLEVDH-VTC-MIDMFGRGGHLAEA--------KDLATTY 500
Query: 353 TSMIAGCVENGKFETAL 369
+S++ N +ET L
Sbjct: 501 SSLVTDSSNNSSWETLL 517
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 37 RTLHLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCG 85
+ L +F P+++I++ + +L F E +G+ F + VL C
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
L G+ IHG ++ G G +V N+L+N+Y+KC I+ A F D VSWN+
Sbjct: 349 GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNT 408
Query: 146 IIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHV 201
++ + G + +L M SG+ + T L C V++ M+
Sbjct: 409 MLFAFGVHGLA-DQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
I L+++ T ++DM+ + G L +A
Sbjct: 468 YRIPLEVDHV----TCMIDMFGRGGHLAEA 493
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 306/603 (50%), Gaps = 19/603 (3%)
Query: 66 RIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRI 125
+ AG+ FT++ L++C + LG + +V+ TG++ + V NS I MYS+
Sbjct: 166 KSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSF 225
Query: 126 EAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKA 185
AR +FD D +SWNS+++G + G E + M R G++ + S +
Sbjct: 226 RGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 186 CCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
CC + L + + +H IK S + VG L+ Y+K G L VF N
Sbjct: 286 CCHETDLK-LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVS 344
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+ TMI+ +A+ +F M+ G+ ++ TF ++ A + G +I
Sbjct: 345 WTTMISS----------NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
H K + VG S + Y+ F +++D + F +++SW +MI+G +NG
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFS 454
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCA--DMAAARSGEQIQGWALKFGISNFIIVQN 423
AL + A+ P+E+ SV+ A + + + G++ LK G+++ +V +
Sbjct: 455 HEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
+ + MYAK G+ID + F E+ + W+ +I + HG + +F M + P
Sbjct: 514 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAP 573
Query: 484 NHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
+ +T L VLTAC+ G+VD+G F +M + Y + + +H +C+VD+LGRAGRL++A+
Sbjct: 574 DLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Query: 544 ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKE 603
+ + M +++LG+CR+H + MG +A+ +E++P + SYV +YNIY + +
Sbjct: 634 MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEW 693
Query: 604 KRALEVRKLMQDQGVKKEPGISWIEVGS-----KVHMFLVDDRSHPMSQLIYSRLEEMLV 658
+A E+RK M+ + V KE G SWI+VG + F D+SHP S IY +E + +
Sbjct: 694 DKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 753
Query: 659 KIN 661
++N
Sbjct: 754 EMN 756
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 261/555 (47%), Gaps = 37/555 (6%)
Query: 31 HSPIRTRTLHLFDETPQRSIISC-----------NSPASLLAFREARIA----GLPVSDF 75
+SP R LFD + QR+ + NSPA L+ + + G + +
Sbjct: 21 YSPYRI-AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEV 79
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
T L C +L+ G IHG +G + V N+++ MY K R + A +F+
Sbjct: 80 TLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL 137
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
+ D VSWN+I++G+ D + + RM +G+ F +T +AL C + +
Sbjct: 138 VDPDVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF-LL 192
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
G L +K L S++VVG + + MY+++G A VF+ + + +N++++G Q
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
T + EA+ +F +M G+ +F+S++ C D + RQIH K+ +
Sbjct: 253 EGT----FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
VG L+ YS G ++ F+ + +VVSWT+MI+ ++ A+S+
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNM 363
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
G P+E ++ + G +I G +K G + V NS I +YAK +
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEAL 423
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
+ A+ F++I +++SW+ MI A +GF++EAL++F L + PN T VL A
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAI 482
Query: 496 SHGG--LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
+ V +G R + K G+ + S+ ++D+ + G ++++++ + + +
Sbjct: 483 AFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEK-VFNEMSQKNQ 540
Query: 554 VMWRALLGACRVHKD 568
+W +++ A H D
Sbjct: 541 FVWTSIISAYSSHGD 555
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 171/380 (45%), Gaps = 27/380 (7%)
Query: 41 LFDETPQRSIISCNSPASLLA------------FREARIAGLPVSDFTFAGVLAYCGSTR 88
+FDE + +IS NS S L+ FR+ G+ + +F V+ C
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+L+L IHG + G + ++ V N L++ YSKC +EA + +F E + VSW ++I+
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+ + M G+ ++ T + A ++ + G +H IK
Sbjct: 351 ------SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK-EGLKIHGLCIKTGF 403
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
S VG + + +YAK L DA FE + +N MI+GF Q G++ EAL
Sbjct: 404 VSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN-----GFSHEAL 458
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDF--RAGRQIHAQICKKNLQCDEFVGCSLVD 326
+F + +++TF S++ A D + G++ HA + K L V +L+D
Sbjct: 459 KMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y+ G+ID+ + FN + + WTS+I+ +G FET ++L + + PD
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVT 577
Query: 387 MSSVMGVCADMAAARSGEQI 406
SV+ C G +I
Sbjct: 578 FLSVLTACNRKGMVDKGYEI 597
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 317/630 (50%), Gaps = 14/630 (2%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGM-DGMIF 110
S S +L FRE + G + +T L C +LG+ IH SVL + ++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 111 VMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRS 170
V N+LI MY++C ++ A + + D V+WNS+I GYV+ ++E E + M +
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ-NLMYKEALEFFSDMIAA 380
Query: 171 GLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTD 230
G + ++ S + A +L G LH IK +SN+ VG L+DMY+K C
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNL-LAGMELHAYVIKHGWDSNLQVGNTLIDMYSK--CNLT 437
Query: 231 AVLVFESFRYHNDFM--YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
+ R H+ + + T+IAG+ Q C EAL LF ++ + + S
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQND---CHV--EALELFRDVAKKRMEIDEMILGS 492
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
I++A + ++IH I +K L D + LVD Y ++ R F S D
Sbjct: 493 ILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
VVSWTSMI+ NG A+ L R+ + +G D + ++ A ++A G +I
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE 468
+ L+ G + + + MYA GD+ SA+ F IE ++ ++ MI HG
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
A+ +F+ M + P+HI+ L +L ACSH GL+DEG + +IM+ +Y + +H C+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 529 DLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
D+LGRA + +A F+ +W ALL ACR H + +G+ A R++ELEP
Sbjct: 732 DMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPG 791
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQL 648
+ VL+ N++ + G+ +VR M+ G++K PG SWIE+ KVH F D+SHP S+
Sbjct: 792 NLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKE 851
Query: 649 IYSRLEEMLVKINKIEFGDEKLPMDISGTE 678
IY +L E+ K+ + E G +L + + E
Sbjct: 852 IYEKLSEVTRKLER-EKGKRELAREFNARE 880
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 257/515 (49%), Gaps = 24/515 (4%)
Query: 41 LFDETPQRSIISCNS----------PASLLA-FREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P R+ + N+ PAS LA + R+ G+P+ +F +L C R+
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 197
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDD-VSWNSIIA 148
+R G +H ++ G F++N+L++MY+K + AAR LFD E D V WNSI++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
Y G E EL MH +G + YT+ SAL A C S +GK +H +K
Sbjct: 258 SYSTSGKSL-ETLELFREMHMTGPAPNSYTIVSALTA-CDGFSYAKLGKEIHASVLKSST 315
Query: 209 NSN-MVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
+S+ + V AL+ MY + G + A + + +N++I G++Q +EA
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-----KEA 370
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDF 327
L F +M G + + +SI+ A + + AG ++HA + K + VG +L+D
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
YS R F D++SWT++IAG +N AL L R + DE I+
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
S++ + + + ++I L+ G+ + +I QN + +Y K ++ A F+ I+
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGLLDTVI-QNELVDVYGKCRNMGYATRVFESIKG 549
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR- 506
DVVSW+ MI +A +G +EA+ +F M +G+ + + LL +L+A + +++G
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 609
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
+ +++K + + ++ + +VD+ G L+ AK
Sbjct: 610 HCYLLRKGFCLEGSI--AVAVVDMYACCGDLQSAK 642
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 240/516 (46%), Gaps = 19/516 (3%)
Query: 71 PVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMD-GMIFVMNSLINMYSKCKRIEAAR 129
PV F + VL CG R + G +H + T + F+ L+ MY KC ++ A
Sbjct: 79 PVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
+FD + +WN++I YV G+ L M G+ + + LKAC
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEP-ASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND-FMYNT 248
+ + G LH +KL +S + AL+ MYAK L+ A +F+ F+ D ++N+
Sbjct: 196 RDIRS-GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
+++ + + G + E L LF EM M G + +T S + AC + G++IHA
Sbjct: 255 ILSSY-----STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 309 ICKKNLQCDEFVGC-SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
+ K + E C +L+ Y+ G + R DVV+W S+I G V+N ++
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
AL +A+G K DE M+S++ ++ +G ++ + +K G + + V N+ I
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 429
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
MY+K F + + D++SW+ +I A + EAL +F + ++ + +
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 488 LLGVLTACS--HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
L +L A S L+ + + + I++K G+ V + +VD+ G+ + A R +
Sbjct: 490 LGSILRASSVLKSMLIVKEI-HCHILRK--GLLDTVIQNE-LVDVYGKCRNMGYATR-VF 544
Query: 546 DSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE 581
+S D V W +++ + ++ + + R++E
Sbjct: 545 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 296/562 (52%), Gaps = 14/562 (2%)
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKC-KRIEAA 128
+P + +A +L C + G H V+ +G++ V NSL+++Y K +
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 129 RVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCV 188
R +FD D +SW S+++GYV G + E+ M GLD +++TL SA+KAC
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYV-TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
+ +G+ H I N + + L +Y DA VF+ + +
Sbjct: 176 LGEVR-LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQM-LGLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
+++ F + EALGLF M GL TF +++ AC + + G++IH
Sbjct: 235 VLSAFSKNDLY-----EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHG 289
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
++ + + V SL+D Y GS+ + + FN K + VSW++++ G +NG+ E
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
A+ + R+ + D + +V+ CA +AA R G++I G ++ G +IV+++ I
Sbjct: 350 AIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALID 405
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
+Y KSG IDSA + ++ ++++W+ M+ A +G EA+ F M GIKP++I+
Sbjct: 406 LYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYIS 465
Query: 488 LLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDS 547
+ +LTAC H G+VDEG YF +M K YGI +H +C++DLLGRAG E+A+ + +
Sbjct: 466 FIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERA 525
Query: 548 GFADDPVMWRALLGACRVHKD-TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRA 606
+D +W LLG C + D + + + IA R++ELEP SYVLL N+Y G+ A
Sbjct: 526 ECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDA 585
Query: 607 LEVRKLMQDQGVKKEPGISWIE 628
L +RKLM +GV K G SWI+
Sbjct: 586 LNIRKLMVRRGVAKTVGQSWID 607
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 194/427 (45%), Gaps = 23/427 (5%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L F E GL ++FT + + C +RLG HG V+ G + F+ ++L
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRS-GLDFSD 176
+Y + AR +FD E D + W ++++ + + D + E L MHR GL
Sbjct: 207 LYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK-NDLYEEALGLFYAMHRGKGLVPDG 265
Query: 177 YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFE 236
T G+ L AC + L GK +H I + SN+VV ++LLDMY K G + +A VF
Sbjct: 266 STFGTVLTACGNLRRLK-QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN 324
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
N ++ ++ G+ Q G +A+ +F EM+ L C F +++KAC +
Sbjct: 325 GMSKKNSVSWSALLGGYCQN-----GEHEKAIEIFREMEEKDLYC----FGTVLKACAGL 375
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
R G++IH Q ++ + V +L+D Y G ID R ++ ++++W +M+
Sbjct: 376 AAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAML 435
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-----QGWAL 411
+ +NG+ E A+S + G KPD +++ C G + + +
Sbjct: 436 SALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 412 KFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMIC-CNAHHGFANEA 469
K G ++ + I + ++G + A + E D W ++ C A+ + A
Sbjct: 496 KPGTEHY----SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVA 551
Query: 470 LRIFELM 476
RI + M
Sbjct: 552 ERIAKRM 558
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 30/313 (9%)
Query: 11 NPFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLA----FREA- 65
N FI S +L + P+ R +FDE P+ +I + S + + EA
Sbjct: 197 NHFISSTLAYLYGVN-----REPVDAR--RVFDEMPEPDVICWTAVLSAFSKNDLYEEAL 249
Query: 66 -------RIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINM 118
R GL TF VL CG+ R L+ G+ IHG ++ G+ + V +SL++M
Sbjct: 250 GLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 119 YSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYT 178
Y KC + AR +F+ + + VSW++++ GY + G+ + E+ M L Y
Sbjct: 310 YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGE-HEKAIEIFREMEEKDL----YC 364
Query: 179 LGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESF 238
G+ LKAC ++ +GK +H ++ N++V +AL+D+Y K+GC+ A V+
Sbjct: 365 FGTVLKACAGLAAVR-LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 239 RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
N +N M++ Q G EA+ F +M G+ +F +I+ AC G
Sbjct: 424 SIRNMITWNAMLSALAQN-----GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGM 478
Query: 299 FRAGRQIHAQICK 311
GR + K
Sbjct: 479 VDEGRNYFVLMAK 491
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 258/509 (50%), Gaps = 31/509 (6%)
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
L +T + +V+AC + G Q+H ++ D V L+ Y+ G +D
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 339 RCFNSTP-------------------------------KLDVVSWTSMIAGCVENGKFET 367
+ FNS P + D ++W +MI+G + G+
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
AL++ G K + M SV+ C + A G + + I + + + +
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
+YAK GD++ A F +E +V +WS + A +GF + L +F LM G+ PN +T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 488 LLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDS 547
+ VL CS G VDEG R+F+ M+ ++GI ++H C+VDL RAGRLEDA I
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 548 GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRAL 607
+W +LL A R++K+ +G + +++ELE +YVLL NIY D+
Sbjct: 404 PMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVS 463
Query: 608 EVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGD 667
VR+ M+ +GV+K+PG S +EV +VH F V D+SHP I + +++ ++ +
Sbjct: 464 HVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKA 523
Query: 668 EKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLIS 727
+ P+ E + HSEK A+ FGI+SL + P+R++KNLRVC DCH +IS
Sbjct: 524 DTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMIS 583
Query: 728 KLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K+ R+II+RD RFHHFK+G CSC +W
Sbjct: 584 KIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 156/373 (41%), Gaps = 42/373 (11%)
Query: 120 SKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS--DY 177
S K ++ A + D ++ + NS+I + + + F+ R+ SG D +Y
Sbjct: 51 SDHKYLDYANQILDRSEKPTLFALNSMIRAHCK-SPVPEKSFDFYRRILSSGNDLKPDNY 109
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLT-------- 229
T+ ++AC + G +H I+ +++ V T L+ +YA+ GCL
Sbjct: 110 TVNFLVQAC-TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNS 168
Query: 230 --------------------DAVL---VFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
D V +FE + +N MI+G+ Q G +RE
Sbjct: 169 IPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQ-----VGESRE 223
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
AL +F MQ+ G+ + S++ AC +G GR H+ I + ++ + +LVD
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y+ G ++ + F + +V +W+S + G NG E L L G P+
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 387 MSSVMGVCADMAAARSGEQ-IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI 445
SV+ C+ + G++ +FGI + + +YA++G ++ A Q++
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 446 E-NPDVVSWSEMI 457
P WS ++
Sbjct: 404 PMKPHAAVWSSLL 416
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 142/344 (41%), Gaps = 49/344 (14%)
Query: 53 CNSPASLLAF---REARIAG--LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDG 107
C SP +F R +G L ++T ++ C R G +HG + G D
Sbjct: 82 CKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDN 141
Query: 108 MIFVMNSLINMYS-------------------------------KCKRIEAARVLFDTCD 136
V LI++Y+ +C + AR LF+
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E D ++WN++I+GY ++G+ RE + M G+ + + S L AC +L+ G
Sbjct: 202 ERDPIAWNAMISGYAQVGES-REALNVFHLMQLEGVKVNGVAMISVLSACTQLGALD-QG 259
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ H + + + + T L+D+YAK G + A+ VF N + +++ + G
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G+ + L LF M+ G+ + TF S+++ C +G G Q H +
Sbjct: 320 -----GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGI 373
Query: 317 D---EFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMI 356
+ E GC LVD Y+ G ++D + P K W+S++
Sbjct: 374 EPQLEHYGC-LVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 299 FRAGRQIHAQI-CKKNLQCDEFVGCSLVDF-YSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
F+ RQIHA++ L+ D VG + S +D + + + K + + SMI
Sbjct: 19 FKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 357 AGCVENGKFETALSLLRQFMASGR--KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG 414
++ E + R+ ++SG KPD + ++ ++ C + +G Q+ G ++ G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVV----------------------- 451
N VQ I +YA+ G +DS F I PD V
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 452 --------SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
+W+ MI A G + EAL +F LM + G+K N + ++ VL+AC+ G +D+
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
G R+ + I V+ +T +VDL + G +E A
Sbjct: 259 G-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LF+ P+R I+ N S +L F ++ G+ V+ VL+ C
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G H + + + + +L+++Y+KC +E A +F +E + +W+S + G
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIK 205
G G + EL + M + G+ + T S L+ C VD+ M + I+
Sbjct: 316 LAMNGFG-EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIE 374
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
L L+D+YA+ G L DAV + +
Sbjct: 375 PQLEHY----GCLVDLYARAGRLEDAVSIIQQ 402
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 300 bits (768), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/631 (29%), Positives = 306/631 (48%), Gaps = 51/631 (8%)
Query: 41 LFDETPQRSIISCNSPAS------------LLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+FDE +R+I++ + S L R ++F ++ VL CG
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+++LG ++ + + G + +MNS+++MY K R+ A F SWN++I+
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 149 GYVRLG-----------------------------DGFREVFELLARMHRSGLDFSDYTL 179
GY + G G E L RM R GL + L
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFAL 241
Query: 180 GSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
LKAC L +GK LH C +K L S+ +AL+DMY+ G L A VF +
Sbjct: 242 PCGLKACSFGGLLT-MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 240 YHND---FMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
+ ++N+M++GFL + AL L ++ L +T S +K C+
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEE-----NEAALWLLLQIYQSDLCFDSYTLSGALKICINY 355
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
+ R G Q+H+ + + D VG LVD ++ G+I D + F+ P D+++++ +I
Sbjct: 356 VNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLI 415
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
GCV++G A L R+ + G D+FI+S+++ VC+ +A+ G+QI G +K G
Sbjct: 416 RGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYE 475
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
+ + + + MY K G+ID+ + F + DVVSW+ +I +G EA R F M
Sbjct: 476 SEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
GI+PN +T LG+L+AC H GL++E E MK +YG+ ++H C+VDLLG+AG
Sbjct: 536 INIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGL 595
Query: 537 LEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNI 596
++A I D +W +LL AC HK+ + IA+++++ P + Y L N
Sbjct: 596 FQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNA 655
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
Y G + +VR+ + G KE G+SWI
Sbjct: 656 YATLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 244/550 (44%), Gaps = 66/550 (12%)
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE 137
A L +CG + + GE+I V+ G+ +F+ N++I+MY + + A +FD E
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSA-LKACCVDKSLNCIG 196
+ V+W ++++GY G + + EL RM S + ++ + SA LKAC + + +G
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAI-ELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ-LG 126
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL-- 254
+++ K +L ++V+ +++DMY K G L +A F+ + +NT+I+G+
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 255 --------------QRQTVS-----CGYARE----ALGLFCEMQMLGLNCSKFTFSSIVK 291
Q VS G+ + AL MQ GL F +K
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS 351
AC G G+Q+H + K L+ F +L+D YS GS+ F+ KL V S
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ-EKLAVNS 305
Query: 352 ----WTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
W SM++G + N + E AL LL Q S D + +S + +C + R G Q+
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFAN 467
+ G IV + + ++A G+I A F + N D++++S +I GF +
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 468 EALRIFELMTVSGIKPNHITLLGVLTACS-----------HGGLVDEGLR---------- 506
A +F + G+ + + +L CS HG + +G
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALV 485
Query: 507 --YFEIMKKDYGITA-------NVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFADDPV 554
Y + + D G+ +V T I+ G+ GR+E+A R+ +++ G + V
Sbjct: 486 DMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKV 545
Query: 555 MWRALLGACR 564
+ LL ACR
Sbjct: 546 TFLGLLSACR 555
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 299/610 (49%), Gaps = 11/610 (1%)
Query: 48 RSIISCNSPA-SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMD 106
R ++ N P SLL FRE + G ++FTF V C ++ E +H ++ +
Sbjct: 25 REAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFW 84
Query: 107 GMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLAR 166
+FV + ++M+ KC ++ A +F+ E D +WN++++G+ + G + F L
Sbjct: 85 SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT-DKAFSLFRE 143
Query: 167 MHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
M + + T+ + +++ +KSL + M H I+L ++ + V + Y K G
Sbjct: 144 MRLNEITPDSVTVMTLIQSASFEKSLKLLEAM-HAVGIRLGVDVQVTVANTWISTYGKCG 202
Query: 227 CLTDAVLVFESFRYHNDFM--YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKF 284
L A LVFE+ + + +N+M + G A +A GL+C M
Sbjct: 203 DLDSAKLVFEAIDRGDRTVVSWNSMFKAY-----SVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 285 TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST 344
TF ++ +C GR IH+ D + + YS F+
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
VSWT MI+G E G + AL+L + SG KPD + S++ C + +G+
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 405 QIQGWALKFGIS-NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHH 463
I A +G + +++ N+ I MY+K G I AR F VV+W+ MI A +
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKH 523
G EAL++F M KPNHIT L VL AC+H G +++G YF IMK+ Y I+ + H
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH 497
Query: 524 STCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELE 583
+C+VDLLGR G+LE+A I + D +W ALL AC++H++ + + A+ + LE
Sbjct: 498 YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLE 557
Query: 584 PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSH 643
P AA YV + NIY AG +R +M+ + +KK PG S I+V K H F V + H
Sbjct: 558 PQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Query: 644 PMSQLIYSRL 653
+++IY L
Sbjct: 618 VENEVIYFTL 627
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 298 bits (763), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 304/598 (50%), Gaps = 19/598 (3%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTG-MDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
T L C ++ G+ IHG ++ G +D SL+NMY+KC + A ++F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
E D +N++I+G+V G + E M +G+ YT S LK D
Sbjct: 122 -SERDVFGYNALISGFVVNGSPL-DAMETYREMRANGILPDKYTFPSLLKGS--DAMELS 177
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND-FMYNTMIAGF 253
K +H A KL +S+ VG+ L+ Y+K + DA VF+ +D ++N ++ G+
Sbjct: 178 DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 254 LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
Q +AL +F +M+ G+ S+ T +S++ A GD GR IH K
Sbjct: 238 SQIFRF-----EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG 292
Query: 314 LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN--GKFETALSL 371
D V +L+D Y +++ F + + D+ +W S++ CV + G + L+L
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL--CVHDYCGDHDGTLAL 350
Query: 372 LRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI----SNFIIVQNSQIC 427
+ + SG +PD +++V+ C +A+ R G +I G+ + G+ S+ + NS +
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMD 410
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
MY K GD+ AR+ F + D SW+ MI AL +F M +G+KP+ IT
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Query: 488 LLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDS 547
+G+L ACSH G ++EG + M+ Y I H C++D+LGRA +LE+A +
Sbjct: 471 FVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISK 530
Query: 548 GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRAL 607
D+PV+WR++L +CR+H + + R+ ELEP YVL+ N+Y +AGK + L
Sbjct: 531 PICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVL 590
Query: 608 EVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEF 665
+VR M+ Q VKK PG SWI + + VH F +++HP + I+ L ++ ++ E+
Sbjct: 591 DVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEY 648
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 160/348 (45%), Gaps = 27/348 (7%)
Query: 41 LFDETPQR-------SIISCNSPA-----SLLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+FDE P R ++++ S +LL F + R G+ VS T VL+ +
Sbjct: 217 VFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG 276
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
++ G +IHG + TG I V N+LI+MY K K +E A +F+ DE D +WNS++
Sbjct: 277 DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC 336
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+ GD L RM SG+ TL + L C SL G+ +H I L
Sbjct: 337 VHDYCGD-HDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLR-QGREIHGYMIVSGL 394
Query: 209 ----NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
+SN + +L+DMY K G L DA +VF+S R + +N MI G+ SCG
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY---GVQSCG-- 449
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI--CKKNLQCDEFVGC 322
AL +F M G+ + TF +++AC G GR AQ+ L + C
Sbjct: 450 ELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC 509
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLD-VVSWTSMIAGCVENGKFETAL 369
++D +++ S P D V W S+++ C +G + AL
Sbjct: 510 -VIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/537 (33%), Positives = 277/537 (51%), Gaps = 12/537 (2%)
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMH--RSGLDFSDYTLGSALKA 185
AR L L W+S+I G+ G LA H R+G+ S +T LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 186 CCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
+ N H +K L+S+ V +L+ Y+ +G A +F+ +
Sbjct: 114 VFKLRDSNPF--QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+ MI GF++ G A EA+ F EM+ G+ ++ T S++KA + D R GR +
Sbjct: 172 WTAMIDGFVRN-----GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 306 HAQICKK-NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGK 364
H + ++CD F+G SLVD Y DD + F+ P +VV+WT++IAG V++
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 365 FETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNS 424
F+ + + + + S P+E +SSV+ CA + A G ++ + +K I +
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 425 QICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPN 484
I +Y K G ++ A L F+ + +V +W+ MI A HG+A +A +F M S + PN
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI 544
+T + VL+AC+HGGLV+EG R F MK + + H C+VDL GR G LE+AK I
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Query: 545 LDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEK 604
V+W AL G+C +HKD +GK+ A RVI+L+P + Y LL N+Y+++
Sbjct: 467 ERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWD 526
Query: 605 RALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPM-SQLIYSRLEEMLVKI 660
VRK M+DQ V K PG SWIEV K+ F+ D P+ S +Y L+ + V++
Sbjct: 527 EVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQM 583
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 217/471 (46%), Gaps = 24/471 (5%)
Query: 51 ISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIF 110
I+ N S LA+R R G+ S TF +L R+ + H ++ G+D F
Sbjct: 81 ITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPF 139
Query: 111 VMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRS 170
V NSLI+ YS + A LFD ++ D V+W ++I G+VR G E M ++
Sbjct: 140 VRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA-SEAMVYFVEMKKT 198
Query: 171 GLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD-LNSNMVVGTALLDMYAKTGCLT 229
G+ ++ T+ S LKA + + G+ +H ++ + ++ +G++L+DMY K C
Sbjct: 199 GVAANEMTVVSVLKAAGKVEDVR-FGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
Query: 230 DAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI 289
DA VF+ N + +IAG++Q + G + +F EM + ++ T SS+
Sbjct: 258 DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKG-----MLVFEEMLKSDVAPNEKTLSSV 312
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV 349
+ AC +G GR++H + K +++ + G +L+D Y G +++ I F + +V
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
+WT+MI G +G A L ++S P+E +V+ CA G ++
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL-FL 431
Query: 410 ALKFGISNFIIVQNSQICM---YAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHG 464
++K G N + CM + + G ++ A+ + + P V W + C H
Sbjct: 432 SMK-GRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD 490
Query: 465 FANEALRIFELMTVSGIKPNH---ITLLGVLTACSHGGLVDEGLRYFEIMK 512
+ L + V ++P+H TLL L + S DE R + MK
Sbjct: 491 Y---ELGKYAASRVIKLQPSHSGRYTLLANLYSESQNW--DEVARVRKQMK 536
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 241/412 (58%), Gaps = 8/412 (1%)
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMA-SGRKPDEFIMSSVMGVCADMAAARSGEQI 406
+V++W MI G V N ++E AL L+ ++ + KP++F +S + CA + + +
Sbjct: 128 NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV 187
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFA 466
+ GI I+ ++ + +YAK GDI ++R F ++ DV W+ MI A HG A
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 467 NEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTC 526
EA+R+F M + P+ IT LG+LT CSH GL++EG YF +M + + I ++H
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGA 307
Query: 527 IVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHA 586
+VDLLGRAGR+++A I D V+WR+LL + R +K+ +G+ IA + L
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE-IA--IQNLSKAK 364
Query: 587 AASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMS 646
+ YVLL NIY+ K + A +VR+LM +G++K G SW+E G +H F D SH +
Sbjct: 365 SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIET 424
Query: 647 QLIYSRLEEMLVKINKIEFGDEK--LPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKS 704
+ IY LE ++ K F + + MD+S E +++HSEKLA+ + I+
Sbjct: 425 KAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEE--NLNYHSEKLALAYVILKSSPG 482
Query: 705 APVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+R+ KN+R+CSDCH +K +SKL R II+RD IRFH F++GLCSC+DYW
Sbjct: 483 TEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 19/238 (7%)
Query: 127 AARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-----YTLGS 181
A +VL + D+ + ++WN +I GYVR + E + L M L F+D ++ S
Sbjct: 117 AKKVLRNASDQ-NVITWNLMIGGYVR-NVQYEEALKALKNM----LSFTDIKPNKFSFAS 170
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
+L AC L+ K +H I + N ++ +AL+D+YAK G + + VF S + +
Sbjct: 171 SLAACARLGDLHH-AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
+ ++N MI GF + G A EA+ +F EM+ ++ TF ++ C G
Sbjct: 230 DVSIWNAMITGF-----ATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEE 284
Query: 302 GRQIHAQICKK-NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIA 357
G++ + ++ ++Q ++VD G + + S P + DVV W S+++
Sbjct: 285 GKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 132/319 (41%), Gaps = 27/319 (8%)
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS 260
VC I L + S M +G + L A V + N +N MI G+++ +
Sbjct: 98 VCNINLIIESLMKIGESGL-----------AKKVLRNASDQNVITWNLMIGGYVR----N 142
Query: 261 CGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
Y L + + +KF+F+S + AC +GD + +H+ + ++ + +
Sbjct: 143 VQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAIL 202
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
+LVD Y+ G I F S + DV W +MI G +G A+ + + A
Sbjct: 203 SSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV 262
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQG-WALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
PD ++ C+ G++ G + +F I + + + + ++G + A
Sbjct: 263 SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA- 321
Query: 440 LTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
++ IE+ PDVV W ++ ++ + N L + +S K LL + +
Sbjct: 322 --YELIESMPIEPDVVIWRSLL--SSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSS 377
Query: 496 SHGGLVDEGLRYFEIMKKD 514
+ + +R E+M K+
Sbjct: 378 TKKWESAQKVR--ELMSKE 394
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 284/554 (51%), Gaps = 69/554 (12%)
Query: 164 LARMHRSGLDFSDYTLGSALKACCVDKSLN---CIGKMLHVCAIKLDLNSNMVVGTALLD 220
L + + G+ L S L+ C KSL I + L + K N ++ L+
Sbjct: 34 LESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFK---RPNTLLSNHLIG 90
Query: 221 MYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL----------------QRQTVS---- 260
MY K G DA VF+ N + +N M++G++ +R VS
Sbjct: 91 MYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTM 150
Query: 261 -CGYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
GYA+ EAL + E + G+ ++F+F+ ++ ACV + RQ H Q+
Sbjct: 151 VIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF 210
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFN-------------------------------S 343
+ + CS++D Y+ G ++ RCF+
Sbjct: 211 LSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCE 270
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
P+ + VSWT++IAG V G AL L R+ +A G KP++F SS + A +A+ R G
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHG 330
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP-DVVSWSEMICCNAH 462
++I G+ ++ + IV +S I MY+KSG ++++ F+ ++ D V W+ MI A
Sbjct: 331 KEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQ 390
Query: 463 HGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVK 522
HG ++ALR+ + M ++PN TL+ +L ACSH GLV+EGLR+FE M +GI + +
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQE 450
Query: 523 HSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL 582
H C++DLLGRAG ++ R I + F D +W A+LG CR+H + +GK AD +I+L
Sbjct: 451 HYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL 510
Query: 583 EPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRS 642
+P ++A Y+LL +IY D GK + ++R +M+ + V KE +SWIE+ KV F V D S
Sbjct: 511 DPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGS 570
Query: 643 HPMSQLIYSRLEEM 656
H ++R EE+
Sbjct: 571 HA-----HARKEEI 579
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 215/511 (42%), Gaps = 76/511 (14%)
Query: 24 LPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAY 83
+P SNP PI L + + S L + R LP A +L
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIR---LPFD--LLASLLQQ 55
Query: 84 CGSTRNLRLGEAIHGSVLVTGMD-GMIFVMNSLINMYSKC-KRIEA-------------- 127
CG T++L+ G+ IH + +TG + N LI MY KC K I+A
Sbjct: 56 CGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS 115
Query: 128 ----------------ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
ARV+FD+ E D VSWN+++ GY + G+ E RSG
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGN-LHEALWFYKEFRRSG 174
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ F++++ L AC + L + + H + SN+V+ +++D YAK G + A
Sbjct: 175 IKFNEFSFAGLLTACVKSRQLQ-LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA 233
Query: 232 VLVFESFRYHNDFMYNTMIAGFL----------------QRQTVS-----CGYARE---- 266
F+ + ++ T+I+G+ ++ VS GY R+
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGN 293
Query: 267 -ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
AL LF +M LG+ +FTFSS + A +I R G++IH + + N++ + V SL+
Sbjct: 294 RALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLI 353
Query: 326 DFYSFFGSIDDGIRCFN-STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
D YS GS++ R F K D V W +MI+ ++G AL +L + +P+
Sbjct: 354 DMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNR 413
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV-QNSQICMYAKSGDIDSARLTFQ 443
+ ++ C+ G + W + + I+ Q C+ G + +
Sbjct: 414 TTLVVILNACSHSGLVEEGLR---WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 444 EIE----NPDVVSWSEMICCNAHHGFANEAL 470
+IE PD W+ ++ HG NE L
Sbjct: 471 KIEEMPFEPDKHIWNAILGVCRIHG--NEEL 499
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 29/259 (11%)
Query: 423 NSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIK 482
N+ + Y KSG + AR+ F + DVVSW+ M+ A G +EAL ++ SGIK
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDY------GITANVKHSTCIVDLLGRAGR 536
N + G+LTAC R ++ ++ + G +NV S I+D + G+
Sbjct: 177 FNEFSFAGLLTACVKS-------RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 537 LEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNI 596
+E AKR D D +W L+ D + + + E P S+ L
Sbjct: 230 MESAKR-CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP---VSWTALIAG 285
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKE-----------PGISWIEVGSKVHMFLVDDRSHPM 645
Y G RAL++ + M GVK E I+ + G ++H +++ P
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP- 344
Query: 646 SQLIYSRLEEMLVKINKIE 664
+ ++ S L +M K +E
Sbjct: 345 NAIVISSLIDMYSKSGSLE 363
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 294 bits (753), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/610 (31%), Positives = 297/610 (48%), Gaps = 26/610 (4%)
Query: 41 LFDETPQRSIISCNSPASLLAFREA----------RIAGLPVS----DFTFAGVLAYCGS 86
LF+E PQ S++S N + RE R+ V +T+ V G
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYV-REGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
++++LG +HG +L + +V N+L+ MY ++E AR +FD D +SWN++
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
I+GY R G + + M +D T+ S L C K L +G+ +H +
Sbjct: 190 ISGYYRNGY-MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE-MGRNVHKLVEEK 247
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
L + V AL++MY K G + +A VF+ + + MI G+ + G
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED-----GDVEN 302
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
AL L MQ G+ + T +S+V C G+ +H ++ + D + SL+
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y+ +D R F+ K W+++IAGCV+N AL L ++ +P+
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
++S++ A +A R I + K G + + + +Y+K G ++SA F I+
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 447 ----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD 502
+ DVV W +I HG + AL++F M SG+ PN IT L ACSH GLV+
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 503 EGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA 562
EGL F M + Y A H TCIVDLLGRAGRL++A I F +W ALL A
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 563 CRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEP 622
C H++ +G+ A+++ ELEP +YVLL NIY G+ K +VR +M++ G++K+P
Sbjct: 603 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 662
Query: 623 GISWIEVGSK 632
G S IE+ S
Sbjct: 663 GHSTIEIRSN 672
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 234/498 (46%), Gaps = 16/498 (3%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTG-MDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
+ +L + +T+++ +A+H V+ G + G I +++L Y+ C I AR LF+
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHI--LSTLSVTYALCGHITYARKLFEEM 75
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF--SDYTLGSALKACCVDKSLN 193
+ +S+N +I YVR G + + + RM G+ YT KA KS+
Sbjct: 76 PQSSLLSYNIVIRMYVREGL-YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
+G ++H ++ + V ALL MY G + A VF+ + + +NTMI+G+
Sbjct: 135 -LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 254 LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
+ GY +AL +F M ++ T S++ C + D GR +H + +K
Sbjct: 194 YRN-----GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 314 LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLR 373
L V +LV+ Y G +D+ F+ + DV++WT MI G E+G E AL L R
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
G +P+ ++S++ VC D G+ + GWA++ + + II++ S I MYAK
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 434 DIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLT 493
+D F WS +I + ++AL +F+ M ++PN TL +L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFA 550
A + + + + + K G +++ +T +V + + G LE A + I + +
Sbjct: 429 AYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 551 DDPVMWRALLGACRVHKD 568
D V+W AL+ +H D
Sbjct: 488 KDVVLWGALISGYGMHGD 505
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 302/618 (48%), Gaps = 52/618 (8%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR----IEAARVLF 132
F +L C +T + +H + G+ L + C R + A LF
Sbjct: 37 FISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLF 91
Query: 133 DTCDELDDVSWNSIIAGYVRL---GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
E D V WN++I G+ ++ G+G R L M + G+ +T L D
Sbjct: 92 VKIPEPDVVVWNNMIKGWSKVDCDGEGVR----LYLNMLKEGVTPDSHTFPFLLNGLKRD 147
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
GK LH +K L SN+ V AL+ MY+ G + A VF+ + F +N M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
I+G+ + + E++ L EM+ ++ + T ++ AC + D +++H +
Sbjct: 208 ISGYNRMKEYE-----ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGK----- 364
+ + + +LV+ Y+ G +D +R F S DV+SWTS++ G VE G
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 365 --------------------------FETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
F +L + R+ ++G PDEF M SV+ CA +
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
+ GE I+ + K I N ++V N+ I MY K G + A+ F +++ D +W+ M+
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGIT 518
A++G EA+++F M I+P+ IT LGVL+AC+H G+VD+ ++F M+ D+ I
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 519 ANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADR 578
++ H C+VD+LGRAG +++A + + ++W ALLGA R+H D M + A +
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 579 VIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLV 638
++ELEP A Y LL NIY + K EVR+ + D +KK PG S IEV H F+
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVA 622
Query: 639 DDRSHPMSQLIYSRLEEM 656
D+SH S+ IY +LEE+
Sbjct: 623 GDKSHLQSEEIYMKLEEL 640
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 FDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNL 90
FD+ P R IS SL FRE + AG+ +FT VL C +L
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 91 RLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGY 150
+GE I + + + V N+LI+MY KC E A+ +F D+ D +W +++ G
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 151 VRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC----CVDKSLNCIGKMLHVCAIKL 206
G G +E ++ +M + D T L AC VD++ KM I+
Sbjct: 445 ANNGQG-QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE- 502
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDA 231
++V ++DM + G + +A
Sbjct: 503 ---PSLVHYGCMVDMLGRAGLVKEA 524
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/620 (28%), Positives = 313/620 (50%), Gaps = 25/620 (4%)
Query: 41 LFDETPQRSIISCNSPASLLAFREARIA--GLPVSDF-----------TFAGVLAYCGST 87
+FD+ P R+++S N+ S + R A P++ TF ++ C
Sbjct: 154 VFDKMPHRNVVSYNALYSAYS-RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL 212
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
++ +G +++ ++ G + V S++ MYS C +E+AR +FD + D V+WN++I
Sbjct: 213 EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI 272
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
G ++ D + M SG+D + +T L C S + +GK++H I D
Sbjct: 273 VGSLK-NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS-LGKLIHARIIVSD 330
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
+++ + ALLDMY G + +A VF N +N++I+G + G+ +A
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN-----GFGEQA 385
Query: 268 LGLFCEM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
+ ++ + +M ++TFS+ + A F G+ +H Q+ K + FVG +L+
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLS 445
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y + + F+ + DVV WT MI G G E A+ + + D F
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
+SSV+G C+DMA R GE A++ G + V + + MY K+G ++A F
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLAS 565
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
NPD+ W+ M+ + HG +AL FE + +G P+ +T L +L ACSH G +G +
Sbjct: 566 NPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG-K 624
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV-MWRALLGACRV 565
+ K+ GI A KH +C+V+L+ +AG +++A I S ++ +WR LL AC
Sbjct: 625 FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
++ +G + A+++++L+P A+++LL N+Y G+ + E+R+ ++ K+PG+S
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Query: 626 WIEV-GSKVHMFLVDDRSHP 644
WIEV + +F D+S+P
Sbjct: 745 WIEVNNNNTQVFSSGDQSNP 764
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/625 (25%), Positives = 281/625 (44%), Gaps = 63/625 (10%)
Query: 41 LFDETPQRSIISCNSPASLLAFRE---------------ARIAGLPVSDFTFAGV--LAY 83
+FD+ PQR+I++ +++ + I +P+++ + V
Sbjct: 44 VFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRK 103
Query: 84 CGSTRNLRLGEAIHGSVLVTGMDGMI---FVMNSLINMYSKCKRIEAARVLFDTCDELDD 140
C S L+ IH VL G + N+LI+MY +C +E AR +FD +
Sbjct: 104 CVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNV 163
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH 200
VS+N++ + Y R D F L M + + T S ++ C V + + +G L+
Sbjct: 164 VSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDV-LMGSSLN 222
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS 260
IKL + N+VV T++L MY+ G L A +F+ + +NTMI G L+ +
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 261 CGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
G L F M M G++ ++FT+S ++ C +G + G+ IHA+I + D +
Sbjct: 283 DG-----LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM-ASG 379
+L+D Y G + + F ++VSW S+I+GC ENG E A+ + R+ + S
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
+PDE+ S+ + A+ G+ + G K G + V + + MY K+ + +SA+
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQ 457
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
F ++ DVV W+EMI ++ G + A++ F M + + +L V+ ACS
Sbjct: 458 KVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMA 517
Query: 500 LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF---------------- 543
++ +G F + G + +VD+ G+ G+ E A+
Sbjct: 518 MLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSML 576
Query: 544 ------------------ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPH 585
IL++GF D V + +LL AC T+ GK + +++ E
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIK 636
Query: 586 AA-ASYVLLYNIYNDAGKEKRALEV 609
A Y + N+ + AG ALE+
Sbjct: 637 AGFKHYSCMVNLVSKAGLVDEALEL 661
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 205/464 (44%), Gaps = 24/464 (5%)
Query: 110 FVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA--GYVRLGDGFRE------VF 161
+ N+LI+MY +C +E AR +FD + + V+ + A YV +G F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 162 ELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS---NMVVGTAL 218
+++ M + + S L CV ++ + +H + + + L
Sbjct: 83 QMIFFMPLNEIASSVVELTRK----CVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 219 LDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
+ MY + G L A VF+ + N YN + + + + + +A A L M
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY----SRNPDFASYAFPLTTHMAFEY 194
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
+ + TF+S+V+ C + D G +++QI K + V S++ YS G ++
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
R F+ D V+W +MI G ++N K E L R + SG P +F S V+ C+ +
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
+ G+ I + + + N+ + MY GD+ A F I NP++VSW+ +I
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374
Query: 459 CNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLTACSHGG-LVDEGLRYFEIMKKDYG 516
+ +GF +A+ ++ L+ +S +P+ T ++A + V L + ++ K Y
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 517 ITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
+ V T ++ + + E A++ + D D V+W ++
Sbjct: 435 RSVFV--GTTLLSMYFKNREAESAQK-VFDVMKERDVVLWTEMI 475
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 287/563 (50%), Gaps = 13/563 (2%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVL-VTGMDGMIFVMNSLINMYSKCKRIEA 127
G D F+ L C ++L G+ IH ++ V D + V+ L++MY+KC I++
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV--VLTGLLDMYAKCGEIKS 194
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
A +F+ + V W S+IAGYV+ D E L RM + + ++YT G+ + AC
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVK-NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 253
Query: 188 VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYN 247
+L+ GK H C +K + + + T+LLDMY K G +++A VF + + M+
Sbjct: 254 KLSALH-QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWT 312
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
MI G+ +V+ EAL LF +M+ + + + T +S++ C I + GR +H
Sbjct: 313 AMIVGYTHNGSVN-----EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
K + D V +LV Y+ D F + D+V+W S+I+G +NG
Sbjct: 368 LSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI--SNFIIVQNSQ 425
AL L + + P+ ++S+ CA + + G + +++K G S+ + V +
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+ YAK GD SARL F IE + ++WS MI G +L +FE M KPN
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
T +L+AC H G+V+EG +YF M KDY T + KH TC+VD+L RAG LE A I
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606
Query: 546 DSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKR 605
D + A L C +H +G+ + ++++L P A+ YVL+ N+Y G+ +
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQ 666
Query: 606 ALEVRKLMQDQGVKKEPGISWIE 628
A EVR LM+ +G+ K G S +E
Sbjct: 667 AKEVRNLMKQRGLSKIAGHSTME 689
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 234/493 (47%), Gaps = 16/493 (3%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELD 139
+L+ C + +LR HG + G+ G I + L+++Y + AR++FD E D
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 140 DVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKML 199
W ++ Y L EV +L + + G + D ALKAC + L+ GK +
Sbjct: 107 FYLWKVMLRCYC-LNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDN-GKKI 164
Query: 200 HVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTV 259
H +K+ N+V+ T LLDMYAK G + A VF N + +MIAG+++
Sbjct: 165 HCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND-- 221
Query: 260 SCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF 319
E L LF M+ + +++T+ +++ AC + G+ H + K ++
Sbjct: 222 ---LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 320 VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASG 379
+ SL+D Y G I + R FN +D+V WT+MI G NG ALSL ++
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
KP+ ++SV+ C + G + G ++K GI + V N+ + MYAK A+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAK 397
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
F+ D+V+W+ +I + +G +EAL +F M + PN +T+ + +AC+ G
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 500 --LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWR 557
V L + + K + +++V T ++D + G + A R I D+ + + W
Sbjct: 458 SLAVGSSLHAYSV-KLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWS 515
Query: 558 ALLGACRVHKDTM 570
A++G DT+
Sbjct: 516 AMIGGYGKQGDTI 528
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 218/475 (45%), Gaps = 22/475 (4%)
Query: 59 LLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINM 118
L+ F R + +++T+ ++ C L G+ HG ++ +G++ ++ SL++M
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 119 YSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYT 178
Y KC I AR +F+ +D V W ++I GY G E L +M + + T
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS-VNEALSLFQKMKGVEIKPNCVT 345
Query: 179 LGSALKACCVDKSLNCIGKMLHVCAIKLDL-NSNMVVGTALLDMYAKTGCLTDAVLVFES 237
+ S L C + ++L +G+ +H +IK+ + ++N V AL+ MYAK DA VFE
Sbjct: 346 IASVLSGCGLIENLE-LGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEM 402
Query: 238 FRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIG 297
+ +N++I+GF Q G EAL LF M + + T +S+ AC ++G
Sbjct: 403 ESEKDIVAWNSIISGFSQN-----GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 298 DFRAGRQIHAQICKKNLQCDE--FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSM 355
G +HA K VG +L+DFY+ G F++ + + ++W++M
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
I G + G +L L + + +KP+E +S++ C G++ ++ +
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKY--FSSMYKD 575
Query: 416 SNFIIVQNSQIC---MYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHGFANEAL 470
NF C M A++G+++ A +++ PDV + + C H F +
Sbjct: 576 YNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEI 635
Query: 471 RIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
I +++ + ++ L+ L A G ++ +MK+ G++ HST
Sbjct: 636 VIKKMLDLHPDDASYYVLVSNLYASD--GRWNQAKEVRNLMKQR-GLSKIAGHST 687
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 162/329 (49%), Gaps = 14/329 (4%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
S N SL F++ + + + T A VL+ CG NL LG ++HG + G+ V
Sbjct: 323 SVNEALSL--FQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNV 379
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
N+L++MY+KC + A+ +F+ E D V+WNSII+G+ + G E L RM+
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS-IHEALFLFHRMNSES 438
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL--NSNMVVGTALLDMYAKTGCLT 229
+ + T+ S AC SL +G LH ++KL +S++ VGTALLD YAK G
Sbjct: 439 VTPNGVTVASLFSACASLGSL-AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497
Query: 230 DAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI 289
A L+F++ N ++ MI G+ ++ G +L LF EM ++ TF+SI
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQ-----GDTIGSLELFEEMLKKQQKPNESTFTSI 552
Query: 290 VKACVAIGDFRAGRQIHAQICKK-NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KL 347
+ AC G G++ + + K N +VD + G ++ + P +
Sbjct: 553 LSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQP 612
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFM 376
DV + + + GC + +F+ ++++ +
Sbjct: 613 DVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 290/558 (51%), Gaps = 14/558 (2%)
Query: 79 GVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD--TCD 136
+L + L + +H V++ G + + + +SL N Y + R++ A F+ C
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 137 ELDDVSWNSIIAGYVRLGDG-FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
+ + SWN+I++GY + + +V L RM R + L A+KAC V L
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKAC-VGLGLLEN 127
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
G ++H A+K L+ + V +L++MYA+ G + A VF+ N ++ ++ G+L+
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 256 RQTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHA-QICKK 312
Y++ E LFC M+ GL T +VKAC + + G+ +H I +
Sbjct: 188 -------YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 313 NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
+ +++ S++D Y +D+ + F ++ +VV WT++I+G + + A L
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLF 300
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS 432
RQ + P++ +++++ C+ + + R G+ + G+ ++ GI + S I MYA+
Sbjct: 301 RQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 433 GDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVL 492
G+I AR F + +V+SWS MI +G EAL F M + PN +T + +L
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 493 TACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADD 552
+ACSH G V EG + FE M +DYG+ +H C+VDLLGRAG + +AK FI +
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480
Query: 553 PVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKL 612
W ALL ACR+HK+ + IA++++ +EP ++ YVLL NIY DAG + VR+
Sbjct: 481 ASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRK 540
Query: 613 MQDQGVKKEPGISWIEVG 630
M +G +K G S EVG
Sbjct: 541 MGIKGYRKHVGQSATEVG 558
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 17/418 (4%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
+C LL + R V F + C L G IHG + G+D +V
Sbjct: 87 TCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYV 146
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
SL+ MY++ +E+A+ +FD + V W ++ GY++ EVF L M +G
Sbjct: 147 APSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD-PEVFRLFCLMRDTG 205
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD-LNSNMVVGTALLDMYAKTGCLTD 230
L TL +KAC + +GK +H +I+ ++ + + +++DMY K L +
Sbjct: 206 LALDALTLICLVKACG-NVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDN 264
Query: 231 AVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIV 290
A +FE+ N M+ T+I+GF + C A EA LF +M + ++ T ++I+
Sbjct: 265 ARKLFETSVDRNVVMWTTLISGFAK-----CERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 291 KACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVV 350
+C ++G R G+ +H + + ++ D S +D Y+ G+I F+ P+ +V+
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVI 379
Query: 351 SWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG-EQIQGW 409
SW+SMI NG FE AL + + P+ S++ C+ + G +Q +
Sbjct: 380 SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 410 ALKFGISNFIIVQNSQICM---YAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAH 462
+G+ + + CM ++G+I A+ + P +W ++ C H
Sbjct: 440 TRDYGV---VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 153/333 (45%), Gaps = 21/333 (6%)
Query: 41 LFDETPQRSII-----------SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P R+ + P F R GL + T ++ CG+
Sbjct: 166 VFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFA 225
Query: 90 LRLGEAIHG-SVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
++G+ +HG S+ + +D ++ S+I+MY KC+ ++ AR LF+T + + V W ++I+
Sbjct: 226 GKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLIS 285
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G+ + E F+L +M R + + TL + L +C SL GK +H I+ +
Sbjct: 286 GFAKCERAV-EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRH-GKSVHGYMIRNGI 343
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+ V T+ +DMYA+ G + A VF+ N +++MI F G EAL
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGIN-----GLFEEAL 398
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG-RQIHAQICKKNLQCDEFVGCSLVDF 327
F +M+ + + TF S++ AC G+ + G +Q + + +E +VD
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDL 458
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVS-WTSMIAGC 359
G I + ++ P + S W ++++ C
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 314/677 (46%), Gaps = 84/677 (12%)
Query: 40 HLFDETPQRSIISCNSPASLL---AFREARIA--------GLPVSDFTFAGVLAYCGSTR 88
+FD P+R ++S N+ S+L F E + G S FT A VL+ C
Sbjct: 93 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 152
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARV-LFDTCDELDDVSWNSII 147
+ G HG + TG+D IFV N+L++MY+KC I V +F++ + ++VS+ ++I
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLG-----SALKACCVDKSL---NCIGKML 199
G R + E ++ M G+ L SA + C S N +GK +
Sbjct: 213 GGLAR-ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 271
Query: 200 HVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF------ 253
H A++L ++ + +LL++YAK + A L+F N +N MI GF
Sbjct: 272 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRS 331
Query: 254 --------------LQRQTVSC------------------------------------GY 263
Q V+C GY
Sbjct: 332 DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGY 391
Query: 264 A-----REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
+ EA+ F +MQ L K T S I+ +C + G+QIH + + + +
Sbjct: 392 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNS-TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
+ L+ YS ++ F+ +LD+ W SMI+G N AL L R+
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 378 SGRK-PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
+ P+E ++V+ C+ + + G Q G +K G + V+ + MY K G+ID
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEID 571
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
SAR F + + V W+EMI H+G +EA+ ++ M SG KP+ IT + VLTACS
Sbjct: 572 SARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
H GLV+ GL M++ +GI + H CIVD LGRAGRLEDA++ + + V+W
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLW 691
Query: 557 RALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQ 616
LL +CRVH D + + +A++++ L+P ++A+YVLL N Y+ + + ++ LM
Sbjct: 692 EILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKN 751
Query: 617 GVKKEPGISWIEVGSKV 633
V K PG SW G+ +
Sbjct: 752 RVHKTPGQSWTTYGNDL 768
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 201/468 (42%), Gaps = 94/468 (20%)
Query: 93 GEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD------------------- 133
G+ IHG ++ GM ++ N L+++Y +C + AR +FD
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 134 ------TCD------ELDDVSWNSIIAGYVRLGDGFRE-VFELLARMHRSGLDFSDYTLG 180
C+ E D VSWN++I+ VR GF E + RM G S +TL
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVR--KGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 181 SALKACCVDKSLNCI-GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTD-AVLVFESF 238
S L AC K L+ + G H A+K L+ N+ VG ALL MYAK G + D V VFES
Sbjct: 143 SVLSAC--SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 239 RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIV------KA 292
N+ Y +I G + V EA+ +F M G+ S+I+ +
Sbjct: 201 SQPNEVSYTAVIGGLARENKV-----LEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 293 CVAIGDFRA---GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV 349
C ++ + G+QIH + D + SL++ Y+ ++ F P+++V
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
VSW MI G + + + ++ L + SG +P+E SV+G C
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC--------------- 360
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEA 469
+SGD+++ R F I P V +W+ M+ +++ EA
Sbjct: 361 --------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 470 LRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGI 517
+ F M +KP+ TL +L++C+ LR+ E K+ +G+
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCAR-------LRFLEGGKQIHGV 441
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 36/364 (9%)
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
++L C D+ GK++H +++ + S+ + LLD+Y + G A VF+
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 241 HNDFMYNTMIA----------------GFLQRQTVSC----------GYAREALGLFCEM 274
+ + +N + G +R VS G+ +AL ++ M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 275 QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI 334
G S+FT +S++ AC + D G + H K L + FVG +L+ Y+ G I
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 335 -DDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
D G+R F S + + VS+T++I G K A+ + R G + D +S+++ +
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 394 CADMAAARS---------GEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
A S G+QI AL+ G + + NS + +YAK+ D++ A L F E
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG 504
+ +VVSW+ MI +++++ M SG +PN +T + VL AC G V+ G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 505 LRYF 508
R F
Sbjct: 370 RRIF 373
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 285/578 (49%), Gaps = 20/578 (3%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
F EAR L DF F +L C S LR I +L+ ++ F++ + +
Sbjct: 28 FEEARRGDLE-RDFLF--LLKKCISVNQLR---QIQAQMLLHSVEKPNFLIPKAVELGD- 80
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
+ LF +E + S+N +I G + L RM SGL +T
Sbjct: 81 ---FNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNF 137
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
AC + + +G+ +H K+ L ++ + +L+ MYAK G + A +F+
Sbjct: 138 VFIACAKLEEIG-VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER 196
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
+ +N+MI+G+ + GYA++A+ LF +M+ G + T S++ AC +GD R
Sbjct: 197 DTVSWNSMISGYSE-----AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRT 251
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVE 361
GR + K + F+G L+ Y G +D R FN K D V+WT+MI +
Sbjct: 252 GRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQ 311
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
NGK A L + +G PD +S+V+ C + A G+QI+ A + + + I V
Sbjct: 312 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYV 371
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
+ MY K G ++ A F+ + + +W+ MI AH G A EAL +F+ M+V
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP-- 429
Query: 482 KPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
P+ IT +GVL+AC H GLV +G RYF M +G+ ++H T I+DLL RAG L++A
Sbjct: 430 -PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAW 488
Query: 542 RFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL-EPHAAASYVLLYNIYNDA 600
F+ D +M A+LGAC KD + + ++E+ E A +YV+ N+ D
Sbjct: 489 EFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADM 548
Query: 601 GKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLV 638
+ ++R LM+D+GV K PG SWIE+ ++ FL
Sbjct: 549 KMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 305/615 (49%), Gaps = 22/615 (3%)
Query: 41 LFDETPQRSI------ISCNSPASLLA-----FREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F+E +R + I C S A ++ E R G+ T +L+
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L + +H ++ G D I VMNS++N+Y KC + A+ LFD ++ D VSWN++I+G
Sbjct: 163 L---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISG 219
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y +G+ E+ +LL RM GL T G++L L +G+MLH +K +
Sbjct: 220 YASVGN-MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLE-MGRMLHCQIVKTGFD 277
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
+M + TAL+ MY K G + V E+ + + MI+G ++ G A +AL
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR-----LGRAEKALI 332
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
+F EM G + S +S+V +C +G F G +H + + D SL+ Y+
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYA 392
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF-MASGRKPDEFIMS 388
G +D + F + D+VSW ++I+G +N AL L + + ++ D F +
Sbjct: 393 KCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVV 452
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP 448
S++ C+ A G+ I ++ I +V + + MY+K G +++A+ F I
Sbjct: 453 SLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK 512
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
DVVSW +I HG + AL I+ SG++PNH+ L VL++CSH G+V +GL+ F
Sbjct: 513 DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIF 572
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
M +D+G+ N +H C+VDLL RA R+EDA +F ++ + +L ACR +
Sbjct: 573 SSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGK 632
Query: 569 TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
T + I + +IEL+P A YV L + + + E M+ G+KK PG S IE
Sbjct: 633 TEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Query: 629 VGSKVHMFLVDDRSH 643
+ K F ++ SH
Sbjct: 693 MNGKTTTFFMNHTSH 707
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 227/493 (46%), Gaps = 13/493 (2%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
FTF +L C S + L G +IH VLV G ++ +SL+N+Y+K + AR +F+
Sbjct: 47 FTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEE 106
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
E D V W ++I Y R G E L+ M G+ TL L L C
Sbjct: 107 MRERDVVHWTAMIGCYSRAGI-VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC 165
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
LH A+ + ++ V ++L++Y K + DA +F+ + +NTMI+G+
Sbjct: 166 ----LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGY- 220
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
S G E L L M+ GL + TF + + + D GR +H QI K
Sbjct: 221 ----ASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
D + +L+ Y G + R + P DVV WT MI+G + G+ E AL + +
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
+ SG ++SV+ CA + + G + G+ L+ G + NS I MYAK G
Sbjct: 337 MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH 396
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP-NHITLLGVLT 493
+D + + F+ + D+VSW+ +I A + +AL +FE M ++ + T++ +L
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
ACS G + G I+ + + I T +VD+ + G LE A+R DS D
Sbjct: 457 ACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQR-CFDSISWKDV 514
Query: 554 VMWRALLGACRVH 566
V W L+ H
Sbjct: 515 VSWGILIAGYGFH 527
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 11/337 (3%)
Query: 260 SCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF 319
S G ++ L F M L FTF S++KAC ++ G IH Q+ D +
Sbjct: 23 SHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFY 82
Query: 320 VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASG 379
+ SLV+ Y+ FG + + F + DVV WT+MI G A SL+ + G
Sbjct: 83 ISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG 142
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSAR 439
KP + ++ ++ + + +A+ +G I V NS + +Y K + A+
Sbjct: 143 IKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 440 LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
F ++E D+VSW+ MI A G +E L++ M G++P+ T L+
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 500 LVDEG-LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRA 558
++ G + + +I+K + + ++K T ++ + + G+ E+A +L++ D V W
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGK-EEASYRVLETIPNKDVVCWTV 316
Query: 559 LLGAC----RVHKDTMMGKHIADRVIELEPHAAASYV 591
++ R K ++ + +L A AS V
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVV 353
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 302/608 (49%), Gaps = 27/608 (4%)
Query: 40 HLFDETPQRSIISCNSPASLLAFREARIA-------------GLPVSDFTFAGVLAYCGS 86
H+FDE P I + A+ A G+ + +T+ VL C
Sbjct: 56 HVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAG 115
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
R + G+ IH V + ++V +L++ Y+KC +E A +FD + D V+WN++
Sbjct: 116 LRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAM 175
Query: 147 IAGYVRLGDGFREVFELLARMHR-SGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
I+G+ L +V L M R GL + T+ A +L GK +H +
Sbjct: 176 ISGF-SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALR-EGKAVHGYCTR 233
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
+ ++++VV T +LD+YAK+ C+ A VF+ N+ ++ MI G+++ + + +
Sbjct: 234 MGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI-----K 288
Query: 266 EALGLFCEMQMLGLNCSKFT---FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
EA +F +M ++ N + T I+ C GD GR +H K D V
Sbjct: 289 EAGEVFFQM-LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN 347
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
+++ FY+ +GS+ D R F+ DV+S+ S+I GCV N + E + L + SG +P
Sbjct: 348 TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRP 407
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
D + V+ C+ +AA G G+ + G + + N+ + MY K G +D A+ F
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 443 QEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD 502
+ D+VSW+ M+ HG EAL +F M +G+ P+ +TLL +L+ACSH GLVD
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 503 EGLRYFEIMKK-DYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
EG + F M + D+ + + H C+ DLL RAG L++A F+ F D + LL
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
Query: 562 ACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
AC +K+ +G ++ ++ L S VLL N Y+ A + + A +R + + +G+ K
Sbjct: 588 ACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
Query: 622 PGISWIEV 629
PG SW++V
Sbjct: 647 PGYSWVDV 654
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 239/503 (47%), Gaps = 29/503 (5%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMD-GMIFVMNSLINMYSKCKRIEAARVLFDTC 135
F +L C +RNL LG+ IH +L + V+ +L +Y+ C +E AR +FD
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 136 --DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN 193
++ ++W+ +I Y D + +L +M SG+ + YT LKAC ++++
Sbjct: 62 PHPRINPIAWDLMIRAYAS-NDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
GK++H D ++M V TAL+D YAK G L A+ VF+ + +N MI+GF
Sbjct: 121 -DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 254 LQRQTVSCGYAREALGLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK 312
++ C + +GLF +M+ + GL+ + T + A G R G+ +H +
Sbjct: 180 ----SLHCCLT-DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 313 NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
D V ++D Y+ I R F+ K + V+W++MI G VEN + A +
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 373 RQFMASGRKPDEFIMSSVMGV------CADMAAARSGEQIQGWALKFGISNFIIVQNSQI 426
Q + + D M + + + CA G + +A+K G + VQN+ I
Sbjct: 295 FQMLVN----DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTII 350
Query: 427 CMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHI 486
YAK G + A F EI DV+S++ +I + E+ R+F M SGI+P+
Sbjct: 351 SFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDIT 410
Query: 487 TLLGVLTACSHGGLVDEGLR---YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
TLLGVLTACSH + G Y + +G N ++D+ + G+L+ AKR
Sbjct: 411 TLLGVLTACSHLAALGHGSSCHGYCVV----HGYAVNTSICNALMDMYTKCGKLDVAKR- 465
Query: 544 ILDSGFADDPVMWRALLGACRVH 566
+ D+ D V W +L +H
Sbjct: 466 VFDTMHKRDIVSWNTMLFGFGIH 488
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 188/417 (45%), Gaps = 25/417 (5%)
Query: 39 LHLFDETPQRSIISCNSPASLLAFR------------EARIAGLPVSDFTFAGVLAYCGS 86
+ +FDE P+R +++ N+ S + RI GL + T G+ G
Sbjct: 158 IKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
LR G+A+HG G + V ++++Y+K K I AR +FD + ++V+W+++
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 147 IAGYVRLGDGFREVFELLARM--HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
I GYV + +E E+ +M + + + +G L C L+ G+ +H A+
Sbjct: 278 IGGYVE-NEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSG-GRCVHCYAV 335
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
K ++ V ++ YAK G L DA F + YN++I G + V+C
Sbjct: 336 KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCV----VNC-RP 390
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
E+ LF EM+ G+ T ++ AC + G H + + +L
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
+D Y+ G +D R F++ K D+VSW +M+ G +G + ALSL +G PDE
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICM---YAKSGDIDSA 438
+ +++ C+ G+Q+ ++ G N I + CM A++G +D A
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFN-SMSRGDFNVIPRIDHYNCMTDLLARAGYLDEA 566
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 239/456 (52%), Gaps = 44/456 (9%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
VF N ++Y MI GF VS G + + + L+ M + + +S++KAC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGF-----VSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD----- 348
D + R+IHAQ+ K VG +++ Y G + + + F+ P D
Sbjct: 138 ----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 193
Query: 349 --------------------------VVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
V WT+MI G V N + AL L R+
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWA--LKFGISNFIIVQNSQICMYAKSGDIDSARL 440
+EF V+ C+D+ A G + + + +SNF V N+ I MY++ GDI+ AR
Sbjct: 254 NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF--VGNALINMYSRCGDINEARR 311
Query: 441 TFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGL 500
F+ + + DV+S++ MI A HG + EA+ F M G +PN +TL+ +L ACSHGGL
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371
Query: 501 VDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
+D GL F MK+ + + ++H CIVDLLGR GRLE+A RFI + D +M LL
Sbjct: 372 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 431
Query: 561 GACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKK 620
AC++H + +G+ IA R+ E E + +YVLL N+Y +GK K + E+R+ M+D G++K
Sbjct: 432 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 621 EPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
EPG S IEV +++H FLV D +HP + IY RL+E+
Sbjct: 492 EPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 218/519 (42%), Gaps = 97/519 (18%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC 135
T VL C +N+ +IH ++ T D FV+ LI + S ++ A +F
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 136 DELDDVSWNSIIAGYV---RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSL 192
+ + ++I G+V R DG L RM + + +Y + S LKAC +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGV----SLYHRMIHNSVLPDNYVITSVLKACDLK--- 140
Query: 193 NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG 252
+ + +H +KL S+ VG ++++Y K+G L +A +F+ + MI
Sbjct: 141 --VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 253 FLQRQTVSCGYAREALGLF---------C----------------------EMQMLGLNC 281
+ + CG+ +EAL LF C EMQM ++
Sbjct: 199 YSE-----CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
++FT ++ AC +G GR +H+ + + ++ FVG +L++ YS G I++ R F
Sbjct: 254 NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF 313
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
DV+S+ +MI+G +G A++ R + G +P++ + +++ C+
Sbjct: 314 RVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS------ 367
Query: 402 SGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNA 461
G L G+ F +S + F +E P + + ++
Sbjct: 368 -----HGGLLDIGLEVF-----------------NSMKRVFN-VE-PQIEHYGCIVDLLG 403
Query: 462 HHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG----LRYFEIMKKDYGI 517
G EA R E + I+P+HI L +L+AC G ++ G R FE D G
Sbjct: 404 RVGRLEEAYRFIENIP---IEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT 460
Query: 518 TANVKHSTCIVDLLGRAGRLEDA---KRFILDSGFADDP 553
+ +L +G+ +++ + + DSG +P
Sbjct: 461 Y------VLLSNLYASSGKWKESTEIRESMRDSGIEKEP 493
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L FRE ++ + ++FT VL+ C L LG +H V M+ FV N+LIN
Sbjct: 239 ALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALIN 298
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
MYS+C I AR +F + D +S+N++I+G G + E ++R G +
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNR-GFRPNQV 357
Query: 178 TLGSALKACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVL 233
TL + L AC +D L M V ++ + ++D+ + G L +A
Sbjct: 358 TLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY----GCIVDLLGRVGRLEEAYR 413
Query: 234 VFESFRYHND-FMYNTMIAG 252
E+ D M T+++
Sbjct: 414 FIENIPIEPDHIMLGTLLSA 433
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 281/541 (51%), Gaps = 24/541 (4%)
Query: 97 HGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDG 156
HG ++ G+ +F+ N L+ Y+K + + A LFD + V+WN +I G ++ DG
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ-RDG 117
Query: 157 FREVFELLARMHRSGLDFSDYTLGS----ALKACCVDKSLNCIGKMLHVCAIKLDLNSNM 212
L + S + F+D +L L C D + G LH +K L S+
Sbjct: 118 DTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSC 177
Query: 213 VVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFC 272
T+L+ Y K G + +A VFE+ + ++N +++ + V G EA GL
Sbjct: 178 FPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY-----VLNGMIDEAFGL-- 230
Query: 273 EMQMLGLNCSKF-----TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDF 327
++++G + ++F TFSS++ AC G+QIHA + K + Q D V +L++
Sbjct: 231 -LKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
Y+ + D CF S +VVSW +MI G +NG+ A+ L Q + +PDE
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
+SV+ CA +A +Q+Q K G ++F+ V NS I Y+++G++ A L F I
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
PD+VSW+ +I A HGFA E+L++FE M + ++P+ IT L VL+ACSHGGLV EGLR
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRC 464
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK 567
F+ M + Y I A +H TC++DLLGRAG +++A + A G C +H+
Sbjct: 465 FKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK-KEPGISW 626
K A +++E+EP +Y +L N Y G +A +RK + K PG SW
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSW 584
Query: 627 I 627
+
Sbjct: 585 L 585
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 182/381 (47%), Gaps = 30/381 (7%)
Query: 41 LFDETPQRSIISCNSPASLLAFRE--------------ARIAGLPVS--DFTFAGVLAYC 84
LFDE P R+I++ N + R+ +RI VS +F G++ C
Sbjct: 93 LFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLC 152
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
+ N++ G +H ++ G++ F SL++ Y KC I AR +F+ + D V WN
Sbjct: 153 TDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWN 212
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDF-SDY-TLGSALKACCVDKSLNCIGKMLHVC 202
++++ YV L E F LL M F DY T S L AC +++ GK +H
Sbjct: 213 ALVSSYV-LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ-----GKQIHAI 266
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
K+ ++ V TALL+MYAK+ L+DA FES N +N MI GF Q G
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQN-----G 321
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
REA+ LF +M + L + TF+S++ +C +Q+ A + KK V
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVAN 381
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
SL+ YS G++ + + CF+S + D+VSWTS+I +G E +L + M +P
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFES-MLQKLQP 440
Query: 383 DEFIMSSVMGVCADMAAARSG 403
D+ V+ C+ + G
Sbjct: 441 DKITFLEVLSACSHGGLVQEG 461
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 180/406 (44%), Gaps = 19/406 (4%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K H +K + +++ + LL Y K DA +F+ N +N +I G +QR
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
+ A + ++ +F +++ C + +AG Q+H + K+ L+
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
F SLV FY G I + R F + D+V W ++++ V NG + A LL+ M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK-LM 234
Query: 377 ASGR---KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
S + + D F SS++ C G+QI K I V + + MYAKS
Sbjct: 235 GSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN 290
Query: 434 DIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLT 493
+ AR F+ + +VVSW+ MI A +G EA+R+F M + ++P+ +T VL+
Sbjct: 291 HLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLS 350
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
+C+ + E ++ + M G + + ++ R G L +A S D
Sbjct: 351 SCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA-LLCFHSIREPDL 408
Query: 554 VMWRALLGACRVHK---------DTMMGKHIADRVIELEPHAAASY 590
V W +++GA H ++M+ K D++ LE +A S+
Sbjct: 409 VSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSH 454
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 310/588 (52%), Gaps = 20/588 (3%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGM--IFVMNSLINMYSKCKRIEAARV 130
S +F V +R+++ +G +L G + + +FV++S I+MY++ IE++R
Sbjct: 213 SPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRR 272
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD---YTLGSALKACC 187
+FD+C E + WN++I YV+ D E EL S SD Y L ++ +
Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQ-NDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 188 VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYN 247
L G+ H K +V+ +L+ MY++ G + + VF S R + +N
Sbjct: 332 QQVEL---GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWN 388
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
TMI+ F+Q G E L L EMQ G T ++++ A + + G+Q HA
Sbjct: 389 TMISAFVQN-----GLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST--PKLDVVSWTSMIAGCVENGKF 365
+ ++ +Q E + L+D YS G I + F + + D +W SMI+G +NG
Sbjct: 444 FLIRQGIQF-EGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
E + R+ + +P+ ++S++ C+ + + G+Q+ G++++ + + V ++
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL 562
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+ MY+K+G I A F + + + V+++ MI HG A+ +F M SGIKP+
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
IT + VL+ACS+ GL+DEGL+ FE M++ Y I + +H CI D+LGR GR+ +A F+
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 546 DSGFADD-PVMWRALLGACRVHKDTMMGKHIADRVIELE--PHAAASYVLLYNIYNDAGK 602
G + +W +LLG+C++H + + + +++R+ + + + + VLL N+Y + K
Sbjct: 683 GLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQK 742
Query: 603 EKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIY 650
K +VR+ M+++G+KKE G S IE+ V+ F+ D+ HP S IY
Sbjct: 743 WKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 140/556 (25%), Positives = 248/556 (44%), Gaps = 49/556 (8%)
Query: 26 FSNPVHSP----IRTR------------TLHLFDETPQRSIISCNS----------PASL 59
FS P +P IR+R LFD P+ + + N+ P
Sbjct: 30 FSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEA 89
Query: 60 LAFREARIAGLPVSD---FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLI 116
L F P ++ +T++ L C T+NL+ G+A+H ++ + V NSL+
Sbjct: 90 LLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLM 149
Query: 117 NMY------SKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRS 170
NMY C + R +FD + V+WN++I+ YV+ G E M R
Sbjct: 150 NMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRN-AEACRQFGIMMRM 208
Query: 171 GLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL--DLNSNMVVGTALLDMYAKTGCL 228
+ S + + A + +S+ + + +KL + ++ V ++ + MYA+ G +
Sbjct: 209 EVKPSPVSFVNVFPAVSISRSIKK-ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI 267
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE-MQMLGLNCSKFTFS 287
+ VF+S N ++NTMI ++Q + E++ LF E + + + T+
Sbjct: 268 ESSRRVFDSCVERNIEVWNTMIGVYVQNDCLV-----ESIELFLEAIGSKEIVSDEVTYL 322
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
A A+ GRQ H + K + + SL+ YS GS+ F S +
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
DVVSW +MI+ V+NG + L L+ + G K D +++++ +++ G+Q
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ--EIENPDVVSWSEMICCNAHHGF 465
+ ++ GI F + + I MY+KSG I ++ F+ D +W+ MI +G
Sbjct: 443 AFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+ +F M I+PN +T+ +L ACS G VD G + + Y + NV ++
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVAS 560
Query: 526 CIVDLLGRAGRLEDAK 541
+VD+ +AG ++ A+
Sbjct: 561 ALVDMYSKAGAIKYAE 576
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 227/517 (43%), Gaps = 40/517 (7%)
Query: 126 EAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD---YTLGSA 182
+ AR LFD + V WN+II G++ + E +RM ++ F++ YT S
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYSRMKKTA-PFTNCDAYTYSST 113
Query: 183 LKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK----TGCLTDAVL--VFE 236
LKAC K+L GK +H I+ NS+ VV +L++MY C V+ VF+
Sbjct: 114 LKACAETKNLKA-GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
+ R N +NT+I+ + V G EA F M + + S +F ++ A
Sbjct: 173 NMRRKNVVAWNTLISWY-----VKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 297 GDFRAGRQIHAQICKKNLQC--DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
+ + + K + D FV S + Y+ G I+ R F+S + ++ W +
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 355 MIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
MI V+N ++ L + + S DE + + G Q G+ K
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
I++ NS + MY++ G + + F + DVVSW+ MI +G +E L +
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYG--ITANVKH---STCIV 528
M G K ++IT+ +L+A S+ LR EI K+ + I ++ ++ ++
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASN-------LRNKEIGKQTHAFLIRQGIQFEGMNSYLI 460
Query: 529 DLLGRAGRLEDAKRFILDSGFAD-DPVMWRALLGACRVHKDTMMGKHIADRVIE--LEPH 585
D+ ++G + +++ SG+A+ D W +++ + T + +++E + P+
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 586 AAASYVLLYNIYN----DAGKEKRALEVRKLMQDQGV 618
A +L D GK+ +R+ + DQ V
Sbjct: 521 AVTVASILPACSQIGSVDLGKQLHGFSIRQYL-DQNV 556
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 43 DETPQRSIISC-----NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIH 97
D+ S+IS ++ + L FR+ + + T A +L C ++ LG+ +H
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 98 GSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGF 157
G + +D +FV ++L++MYSK I+ A +F E + V++ ++I GY + G G
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 158 REVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIK 205
R + L M SG+ T + L AC +D+ L +M V I+
Sbjct: 605 RAI-SLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 314/638 (49%), Gaps = 53/638 (8%)
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE 137
A +L+ C R G +H + +G++ ++ L+ YS A+ + + D
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN-CIG 196
L + WN +IA Y + + F EV RM G+ +T S LKAC ++L+ G
Sbjct: 107 LHPLPWNVLIASYAK-NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC--GETLDVAFG 163
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+++H S++ V AL+ MY + + A +F+ + +N +I +
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY--- 220
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI--------------------------- 289
S G EA LF +M G+ S T++ I
Sbjct: 221 --ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSL 278
Query: 290 --------VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
+KAC IG R G++IH + + V +L+ YS + + F
Sbjct: 279 DPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF 338
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
T + + +W S+I+G + K E A LLR+ + +G +P+ ++S++ +CA +A +
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 402 SGEQIQGWALKFG-ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCN 460
G++ + L+ ++ ++ NS + +YAKSG I +A+ + D V+++ +I
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGY 458
Query: 461 AHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITAN 520
+ G AL +F+ MT SGIKP+H+T++ VL+ACSH LV EG R F M+ +YGI
Sbjct: 459 GNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPC 518
Query: 521 VKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVI 580
++H +C+VDL GRAG L AK I + + W LL AC +H +T +GK A++++
Sbjct: 519 LQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLL 578
Query: 581 ELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDD 640
E++P YVL+ N+Y AG + EVR +M+D GVKK+PG +WI+ S +F V D
Sbjct: 579 EMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGD 638
Query: 641 RSHPMSQLIYSRLEEM--LVK------INKIEFGDEKL 670
S P + Y L+ + L+K INK++ DE+L
Sbjct: 639 TSSPEACNTYPLLDGLNQLMKDNAGYAINKVQSSDEEL 676
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 223/516 (43%), Gaps = 54/516 (10%)
Query: 13 FIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLL-----AFREARI 67
+P F N S I + P +I+ + L A++
Sbjct: 80 LVPKLVTFYSAFNLHNEAQSIIENSDI--LHPLPWNVLIASYAKNELFEEVIAAYKRMVS 137
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
G+ FT+ VL CG T ++ G +HGS+ V+ ++V N+LI+MY + + +
Sbjct: 138 KGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGI 197
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYT--------- 178
AR LFD E D VSWN++I Y G + E FEL +M SG++ S T
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEG-MWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 179 -----LGS---------------------ALKACCVDKSLNCIGKMLHVCAIKLDLNSNM 212
+G+ LKAC + ++ +GK +H AI +
Sbjct: 257 QTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR-LGKEIHGLAIHSSYDGID 315
Query: 213 VVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFC 272
V L+ MY+K L A++VF ++ +N++I+G+ Q + EA L
Sbjct: 316 NVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK-----SEEASHLLR 370
Query: 273 EMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD-EFVGCSLVDFYSFF 331
EM + G + T +SI+ C I + + G++ H I ++ D + SLVD Y+
Sbjct: 371 EMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKS 430
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G I + + K D V++TS+I G G+ AL+L ++ SG KPD + +V+
Sbjct: 431 GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 392 GVCADMAAARSGEQI-QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPD 449
C+ GE++ ++GI + + + +Y ++G + A+ + P
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Query: 450 VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+W+ ++ NA H N + + + +KP +
Sbjct: 551 GATWATLL--NACHIHGNTQIGKWAAEKLLEMKPEN 584
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 296/582 (50%), Gaps = 56/582 (9%)
Query: 115 LINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF 174
LI K +I AR LFD E D V+W +I GY++LGD RE EL R+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGD-MREARELFDRVDSR---- 106
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
+ +A+ + + I +ML + N+V ++D YA++G + A+ +
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEML----FQEMPERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
F+ N +N+M+ +QR G EA+ LF M + +++++V
Sbjct: 163 FDEMPERNIVSWNSMVKALVQR-----GRIDEAMNLFERMPRRDV----VSWTAMVDGLA 213
Query: 295 AIGDFRAGRQIHAQICKKNL--------------QCDE----FVGCSLVDFYSFFGSIDD 336
G R++ + ++N+ + DE F DF S+ I
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITG 273
Query: 337 GIR---------CFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFI 386
IR F+ P+ +V+SWT+MI G VEN + E AL++ + + G KP+
Sbjct: 274 FIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE-- 444
S++ C+D+A G+QI K IV ++ + MY+KSG++ +AR F
Sbjct: 334 YVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG 504
+ D++SW+ MI AHHG EA+ ++ M G KP+ +T L +L ACSH GLV++G
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Query: 505 LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWR----ALL 560
+ +F+ + +D + +H TC+VDL GRAGRL+D FI DD + R A+L
Sbjct: 454 MEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI----NCDDARLSRSFYGAIL 509
Query: 561 GACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKK 620
AC VH + + K + +V+E A +YVL+ NIY GK + A E+R M+++G+KK
Sbjct: 510 SACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKK 569
Query: 621 EPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK 662
+PG SW++VG + H+F+V D+SHP + + S L ++ K+ K
Sbjct: 570 QPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 171/405 (42%), Gaps = 61/405 (15%)
Query: 41 LFDETPQRSIISCNSPAS----LLAFREARIAGLPVSD----FTFAGVLAYCGSTRNLRL 92
LFD P+R +++ + L REAR V T+ +++ ++ L +
Sbjct: 68 LFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSI 127
Query: 93 GEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVR 152
E + + + + N++I+ Y++ RI+ A LFD E + VSWNS++ V+
Sbjct: 128 AEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQ 183
Query: 153 LGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNM 212
G E L RM R + + K VD++ + L C + N+
Sbjct: 184 RGR-IDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEA-----RRLFDCMPE----RNI 233
Query: 213 VVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ--------------- 257
+ A++ YA+ + +A +F+ + +NTMI GF++ +
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK 293
Query: 258 ------TVSCGYA-----REALGLFCEMQMLG-LNCSKFTFSSIVKACVAIGDFRAGRQI 305
T+ GY EAL +F +M G + + T+ SI+ AC + G+QI
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI 353
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSI-------DDGIRCFNSTPKLDVVSWTSMIAG 358
H I K Q +E V +L++ YS G + D+G+ C + D++SW SMIA
Sbjct: 354 HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVC-----QRDLISWNSMIAV 408
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
+G + A+ + Q G KP +++ C+ G
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 34 IRTRTLH----LFDETPQRSIISC------------NSPASLLAFREARIAGLPVSDFTF 77
IR R ++ LFD P++++IS N A + + R + + T+
Sbjct: 275 IRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT--- 134
+L+ C L G+ IH + + V ++L+NMYSK + AAR +FD
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDK 190
C + D +SWNS+IA Y G G +E E+ +M + G S T + L AC V+K
Sbjct: 395 C-QRDLISWNSMIAVYAHHGHG-KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTD 230
+ ++ ++ L T L+D+ + G L D
Sbjct: 453 GMEFFKDLVRDESLPLREEHY----TCLVDLCGRAGRLKD 488
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 276 bits (705), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 310/622 (49%), Gaps = 22/622 (3%)
Query: 41 LFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD P R +++ ++ S L F+ G+ T V+ C
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC 217
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
LR+ ++HG + D + NSL+ MYSKC + ++ +F+ + + VSW ++I+
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS 277
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y R G+ + + M +SG++ + TL S L +C + L GK +H A++ +L+
Sbjct: 278 YNR-GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL-IGLIREGKSVHGFAVRRELD 335
Query: 210 SNM-VVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
N + AL+++YA+ G L+D V N +N++I+ + R G +AL
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR-----GMVIQAL 390
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
GLF +M + FT +S + AC G G+QIH + + ++ DEFV SL+D Y
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMY 449
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
S GS+D FN VV+W SM+ G +NG A+SL S + +E
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP 448
+V+ C+ + + G+ + + G+ + + + I MYAK GD+++A F+ + +
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
+VSWS MI HG A+ F M SG KPN + + VL+AC H G V+EG YF
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
+MK +G++ N +H C +DLL R+G L++A R I + F D +W +L+ CR+H+
Sbjct: 629 NLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQK 687
Query: 569 TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
+ K I + + ++ Y LL NIY + G+ + +R M+ +KK PG S IE
Sbjct: 688 MDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
Query: 629 VGSKVHMFLVDDRSHPMSQLIY 650
+ KV F + + + IY
Sbjct: 748 IDQKVFRFGAGEENRIQTDEIY 769
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 219/437 (50%), Gaps = 14/437 (3%)
Query: 72 VSDFTFAGVLAYC-GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARV 130
+S F F VL C GS +L +G +HG ++ G+D + SL+ MY + + A
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
+FD D V+W+++++ + G+ + + M G++ T+ S ++ C
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVK-ALRMFKCMVDDGVEPDAVTMISVVEGCA--- 213
Query: 191 SLNC--IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
L C I + +H + + + + +LL MY+K G L + +FE N +
Sbjct: 214 ELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTA 273
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
MI+ + + + ++ +AL F EM G+ + T S++ +C IG R G+ +H
Sbjct: 274 MISSYNRGE-----FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 309 ICKKNLQCD-EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
++ L + E + +LV+ Y+ G + D ++V+W S+I+ G
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 388
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
AL L RQ + KPD F ++S + C + G+QI G ++ +S+ VQNS I
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLID 447
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
MY+KSG +DSA F +I++ VV+W+ M+C + +G + EA+ +F+ M S ++ N +T
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 488 LLGVLTACSHGGLVDEG 504
L V+ ACS G +++G
Sbjct: 508 FLAVIQACSSIGSLEKG 524
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 228/481 (47%), Gaps = 19/481 (3%)
Query: 86 STRNLRLGEAIHGSVLVTG-MDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
S +LRL +H +LVTG + + LI Y+ +++R++F+ D +
Sbjct: 10 SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69
Query: 145 SIIAGYV--RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVC 202
+I V L D +L R+ S + S L+AC + +G +H
Sbjct: 70 VLIKCNVWCHLLDA---AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
IK ++ + V+ T+LL MY +TG L+DA VF+ + ++T+++ L+ G
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN-----G 181
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
+AL +F M G+ T S+V+ C +G R R +H QI +K DE +
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF-ETALSLLRQFMASGRK 381
SL+ YS G + R F K + VSWT+MI+ G+F E AL + + SG +
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS-YNRGEFSEKALRSFSEMIKSGIE 300
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS-NFIIVQNSQICMYAKSGDIDSARL 440
P+ + SV+ C + R G+ + G+A++ + N+ + + + +YA+ G +
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 441 TFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGL 500
+ + + ++V+W+ +I AH G +AL +F M IKP+ TL ++AC + GL
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 501 VDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRAL 559
V G + + +++ D ++ ++D+ ++G ++ A + + V W ++
Sbjct: 421 VPLGKQIHGHVIRTD---VSDEFVQNSLIDMYSKSGSVDSAST-VFNQIKHRSVVTWNSM 476
Query: 560 L 560
L
Sbjct: 477 L 477
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 291/573 (50%), Gaps = 19/573 (3%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
NL + +H ++ + + + LI+ S C++ A +F+ E + NS+I
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+ + ++ F + + M R GL ++T LKAC L + KM+H KL L
Sbjct: 91 AHAQNSQPYQAFF-VFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV-KMMHNHIEKLGL 148
Query: 209 NSNMVVGTALLDMYAKTGCL--TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
+S++ V AL+D Y++ G L DA+ +FE + +N+M+ G V G R+
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL-----VKAGELRD 203
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A LF EM L ++++++ + ++ ++ ++N ++V
Sbjct: 204 ARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERN----TVSWSTMVM 255
Query: 327 FYSFFGSIDDGIRCFNSTP--KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
YS G ++ F+ P +VV+WT +IAG E G + A L+ Q +ASG K D
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 385 FIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE 444
+ S++ C + G +I + + + V N+ + MYAK G++ A F +
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG 504
I D+VSW+ M+ HG EA+ +F M GI+P+ +T + VL +C+H GL+DEG
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 505 LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACR 564
+ YF M+K Y + V+H C+VDLLGR GRL++A + + + V+W ALLGACR
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACR 495
Query: 565 VHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGI 624
+H + + K + D +++L+P +Y LL NIY A + ++R M+ GV+K G
Sbjct: 496 MHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGA 555
Query: 625 SWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEML 657
S +E+ +H F V D+SHP S IY L ++
Sbjct: 556 SSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 168/372 (45%), Gaps = 30/372 (8%)
Query: 38 TLHLFDETPQRSIISCNS----------P-ASLLAFREARIAGLPVSDFTFAGVLAYCGS 86
+ +F++ + ++ CNS P + F E + GL +FT+ +L C
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCK--RIEAARVLFDTCDELDDVSWN 144
L + + +H + G+ I+V N+LI+ YS+C + A LF+ E D VSWN
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
S++ G V+ G+ R+ L M + L + L + + K+ KM +
Sbjct: 190 SMLGGLVKAGE-LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY--HNDFMYNTMIAGFLQRQTVSCG 262
S MV+G Y+K G + A ++F+ N + +IAG+ ++ G
Sbjct: 249 SW---STMVMG------YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEK-----G 294
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
+EA L +M GL SI+ AC G G +IH+ + + NL + +V
Sbjct: 295 LLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLN 354
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
+L+D Y+ G++ FN PK D+VSW +M+ G +G + A+ L + G +P
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRP 414
Query: 383 DEFIMSSVMGVC 394
D+ +V+ C
Sbjct: 415 DKVTFIAVLCSC 426
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 33/294 (11%)
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
+GL +LA C + L LG IH + + + +V+N+L++MY+KC ++
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC- 186
A +F+ + D VSWN+++ G G G +E EL +RM R G+ T + L +C
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHG-KEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 187 ---CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND 243
+D+ ++ M V DL + L+D+ + G L +A+ V ++
Sbjct: 428 HAGLIDEGIDYFYSMEKV----YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP- 482
Query: 244 FMYNTMIAGFLQ---RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
N +I G L R A+E L ++ C +S + A D+
Sbjct: 483 ---NVVIWGALLGACRMHNEVDIAKEVLDNLVKLD----PCDPGNYSLLSNIYAAAEDWE 535
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFN----STPKLDVV 350
I +++ K++ ++ G S V+ ++DGI F S PK D +
Sbjct: 536 GVADIRSKM--KSMGVEKPSGASSVE-------LEDGIHEFTVFDKSHPKSDQI 580
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 264/532 (49%), Gaps = 47/532 (8%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG- 171
+S+++ Y K RI AR LFD E + ++W ++I GY + G F + F L RM + G
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAG-FFEDGFGLFLRMRQEGD 270
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ + TL KAC D G +H ++ L ++ +G +L+ MY+K G + +A
Sbjct: 271 VKVNSNTLAVMFKAC-RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVK 291
VF + + +N++I G +QR+ +S EA LF +M K
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQIS-----EAYELFEKMPG--------------K 370
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS 351
V+ D G +S G I + F P+ D ++
Sbjct: 371 DMVSWTDMIKG-------------------------FSGKGEISKCVELFGMMPEKDNIT 405
Query: 352 WTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWAL 411
WT+MI+ V NG +E AL + + P+ + SSV+ A +A G QI G +
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 412 KFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALR 471
K I N + VQNS + MY K G+ + A F I P++VS++ MI +++GF +AL+
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
+F ++ SG +PN +T L +L+AC H G VD G +YF+ MK Y I H C+VDLL
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLL 585
Query: 532 GRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYV 591
GR+G L+DA I +W +LL A + H + + A ++IELEP +A YV
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 592 LLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSH 643
+L +Y+ GK + + + + + +KK+PG SWI + +VH FL D S
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 58/366 (15%)
Query: 41 LFDETPQRSIISCNS------PASL------LAFREARIAGLPVSDFTFAGVLAYCGSTR 88
LFD +R++I+ + A L R + + V+ T A + C
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
R G IHG V ++ +F+ NSL++MYSK + A+ +F D VSWNS+I
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G V+ E +EL +M GK
Sbjct: 350 GLVQRKQ-ISEAYELFEKMP---------------------------GK----------- 370
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+MV T ++ ++ G ++ V +F ++ + MI+ F VS GY EAL
Sbjct: 371 --DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF-----VSNGYYEEAL 423
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
F +M + + +TFSS++ A ++ D G QIH ++ K N+ D V SLV Y
Sbjct: 424 CWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMY 483
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
G+ +D + F+ + ++VS+ +MI+G NG + AL L +SG++P+
Sbjct: 484 CKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFL 543
Query: 389 SVMGVC 394
+++ C
Sbjct: 544 ALLSAC 549
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 196/493 (39%), Gaps = 76/493 (15%)
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ----------- 257
N ++V A++ YA+ G ++ A VF+ YN MI ++ +
Sbjct: 78 NRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFC 137
Query: 258 -----------TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
T+ G+ R G F E + L S+ + G RAG+
Sbjct: 138 DIPEKNAVSYATMITGFVRA--GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNE 195
Query: 307 AQICKKNLQCDEFVGC-SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
A + + E V C S+V Y G I D F+ + +V++WT+MI G + G F
Sbjct: 196 AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFF 255
Query: 366 ETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNS 424
E L + G K + ++ + C D R G QI G + + + + NS
Sbjct: 256 EDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNS 315
Query: 425 QICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPN 484
+ MY+K G + A+ F ++N D VSW+ +I +EA +FE M +
Sbjct: 316 LMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKD 371
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF- 543
++ ++ S G + + + F +M + IT T ++ G E+A +
Sbjct: 372 MVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW-----TAMISAFVSNGYYEEALCWF 426
Query: 544 --ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL------------------- 582
+L + + ++L A D + G I RV+++
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKC 486
Query: 583 --------------EPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEP-GISWI 627
EP+ SY + + Y+ G K+AL++ +++ G KEP G++++
Sbjct: 487 GNTNDAYKIFSCISEPN-IVSYNTMISGYSYNGFGKKALKLFSMLESSG--KEPNGVTFL 543
Query: 628 EVGSK-VHMFLVD 639
+ S VH+ VD
Sbjct: 544 ALLSACVHVGYVD 556
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLF 132
+ +TF+ VL+ S +L G IHG V+ + + V NSL++MY KC A +F
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 133 DTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSL 192
E + VS+N++I+GY G G ++ +L + + SG + + T + L AC +
Sbjct: 497 SCISEPNIVSYNTMISGYSYNGFG-KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Query: 193 NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ K ++ ++D+ ++G L DA
Sbjct: 556 DLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDA 594
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 206/367 (56%), Gaps = 2/367 (0%)
Query: 278 GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG 337
G + + SS V++C DFR G H K D ++G SLV Y G +++
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 338 IRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADM 397
+ F P+ +VVSWT+MI+G + + + L L + S P+++ ++++ C
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 398 AAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMI 457
A G + L G+ +++ + NS I MY K GD+ A F + N DVVSW+ MI
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
Query: 458 CCNAHHGFANEALRIFEL-MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYG 516
A HG A +A+ +FEL M SG KP+ IT LGVL++C H GLV EG ++F +M ++G
Sbjct: 295 AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEHG 353
Query: 517 ITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIA 576
+ + H +C+VDLLGR G L++A I + + V+W +LL +CRVH D G A
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAA 413
Query: 577 DRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMF 636
+ + LEP AA++V L N+Y G K A VRKLM+D+G+K PG SWIE+ + V MF
Sbjct: 414 EERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMF 473
Query: 637 LVDDRSH 643
+D S+
Sbjct: 474 KAEDGSN 480
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 152/359 (42%), Gaps = 20/359 (5%)
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCL 228
R G F Y L SA+++C +++ G H A+K S++ +G++L+ +Y +G +
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFR-TGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEV 171
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
+A VFE N + MI+GF Q V L L+ +M+ + + +TF++
Sbjct: 172 ENAYKVFEEMPERNVVSWTAMISGFAQEWRVDI-----CLKLYSKMRKSTSDPNDYTFTA 226
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
++ AC G GR +H Q L+ + SL+ Y G + D R F+ D
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD 286
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFM-ASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
VVSW SMIAG ++G A+ L M SG KPD V+ C + G +
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHH 463
+ G+ + N C+ G + + IEN P+ V W ++ H
Sbjct: 347 NLMAEHGLKPEL---NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
Query: 464 GFANEALRIFE--LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITAN 520
G +R E LM H+ L + + G E ++M KD G+ N
Sbjct: 404 GDVWTGIRAAEERLMLEPDCAATHVQLANLYASV---GYWKEAATVRKLM-KDKGLKTN 458
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 15/306 (4%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
G + + + CG R+ R G H L G +++ +SL+ +Y +E A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 129 RVLFDTCDELDDVSWNSIIAGYVRLGDGFRE--VFELLARMHRSGLDFSDYTLGSALKAC 186
+F+ E + VSW ++I+G+ + +R +L ++M +S D +DYT + L AC
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQ---EWRVDICLKLYSKMRKSTSDPNDYTFTALLSAC 231
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
+L G+ +H + + L S + + +L+ MY K G L DA +F+ F + +
Sbjct: 232 TGSGALG-QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQM--LGLNCSKFTFSSIVKACVAIGDFRAGRQ 304
N+MIAG+ Q G A +A+ LF E+ M G T+ ++ +C G + GR+
Sbjct: 291 NSMIAGYAQH-----GLAMQAIELF-ELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 305 IHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENG 363
+ + L+ + LVD FG + + + + P K + V W S++ C +G
Sbjct: 345 FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Query: 364 KFETAL 369
T +
Sbjct: 405 DVWTGI 410
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 31/318 (9%)
Query: 41 LFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F+E P+R+++S + S A + + R + +D+TF +L+ C +
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G ++H L G+ + + NSLI+MY KC ++ A +FD D VSWNS+IAG
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 150 YVRLGDGFR--EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA---I 204
Y + G + E+FEL+ M +SG T L +C + K ++ A +
Sbjct: 297 YAQHGLAMQAIELFELM--MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
K +LN + L+D+ + G L +A+ + E+ N++I G L G
Sbjct: 355 KPELNHY----SCLVDLLGRFGLLQEALELIENM----PMKPNSVIWGSLLFSCRVHGDV 406
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
+ E ML +C+ T + ++G ++ + + K L+ + GCS
Sbjct: 407 WTGIRAAEERLMLEPDCAA-THVQLANLYASVGYWKEAATVRKLMKDKGLKTNP--GCSW 463
Query: 325 VDF--YSFFGSIDDGIRC 340
++ Y F +DG C
Sbjct: 464 IEINNYVFMFKAEDGSNC 481
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 281/576 (48%), Gaps = 63/576 (10%)
Query: 110 FVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHR 169
+ N +++ ++K + AR LF+ E D V+ NS++ GY+ G E L ++
Sbjct: 125 YSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA-EEALRLFKELNF 183
Query: 170 SGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLT 229
S TL + LKAC ++L C GK +H + + + + ++L+++YAK G L
Sbjct: 184 SA---DAITLTTVLKACAELEALKC-GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 230 DAVLVFESFRYHNDFMYNTMIAGF------------LQRQTVSC---------GY----- 263
A + E R +D + +I+G+ R++ C GY
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
EAL LF EM+ S+ T ++++ AC+ +G G+Q+H CK L D V +
Sbjct: 300 KMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 324 LVDFYS-----------------------------FF--GSIDDGIRCFNSTPKLDVVSW 352
L+D YS +F G IDD R F ++SW
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
SM G +NG L Q DE +SSV+ CA +++ GEQ+ A
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
G+ + +V +S I +Y K G ++ R F + D V W+ MI A +G EA+ +
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
F+ M+V+GI+P IT + VLTAC++ GLV+EG + FE MK D+G + +H +C+VDLL
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLA 598
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVL 592
RAG +E+A + + F D MW ++L C + MGK A+++IELEP + +YV
Sbjct: 599 RAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQ 658
Query: 593 LYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
L I+ +G + + VRKLM++ V K PG SW +
Sbjct: 659 LSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 182/620 (29%), Positives = 293/620 (47%), Gaps = 62/620 (10%)
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNS--NMVVGTALLDMYAKTGCLTDAVLVFES--FRYHN 242
C +S GK LH L + AL YA +G + A +F+ +
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+ + T+++ F + G ++ LF EM+ + + + C + D
Sbjct: 76 NVDWTTLLSSFSRY-----GLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFG------------------------------ 332
+Q H K + V +L+D Y G
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 333 -SIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM-ASGRKPDEFIMSSV 390
++ G F+ P+ + V+WT M+AG + G L LL + + G + + S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 391 MGVCADMAAARSGEQIQGWALKFGI-------SNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+ CA G + +ALK + + ++V + + MYAK G+IDS+ F+
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
+ +VV+W+ + A HG + +F M + +KP+ +T VL+ACSH G+VDE
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDE 369
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
G R F ++ YG+ V H C+VDLLGRAG +E+A+ + + + V+ +LLG+C
Sbjct: 370 GWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 564 RVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPG 623
VH + + I +I++ P +L+ N+Y G+ A +R ++ +G++K PG
Sbjct: 429 SVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPG 488
Query: 624 ISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIV 683
+S I V VH F DRSHP ++ IY +L E++ +I + +P D+SG +
Sbjct: 489 LSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGY----VP-DVSGLVSHSEG 543
Query: 684 GMSH-------HSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIIL 736
+ HSEKLAV FG++ S P+ V KNLR+C DCH MK++SK+ R+II+
Sbjct: 544 DLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIII 603
Query: 737 RDAIRFHHFKEGLCSCKDYW 756
RD RFH FK G CSC DYW
Sbjct: 604 RDRNRFHQFKGGSCSCSDYW 623
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 204/478 (42%), Gaps = 65/478 (13%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMI--FVMNSLINMYSKCKRIEAARVLFDTC-- 135
+L +C LR G+ +H + +G+ ++ N+L Y+ + A+ LFD
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 136 DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI 195
E D+V W ++++ + R G +L M R ++ D ++ C + L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGL-LVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG-F 129
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR---------------- 239
+ H A+K+ + +++ V AL+DMY K G +++ +FE
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 240 ----------YH-----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM-LGLNCSK 283
+H N + M+AG+L G+ RE L L EM G +
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYL-----GAGFTREVLELLAEMVFRCGHGLNF 244
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE-------FVGCSLVDFYSFFGSIDD 336
T S++ AC G+ GR +H KK + E VG +LVD Y+ G+ID
Sbjct: 245 VTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDS 304
Query: 337 GIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
+ F K +VV+W ++ +G +GK + + Q M KPD+ ++V+ C
Sbjct: 305 SMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ-MIREVKPDDLTFTAVLSAC-- 361
Query: 397 MAAARSGEQIQGW----ALKF-GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP--D 449
+ SG +GW +L+F G+ + + + ++G I+ A + +E+ P +
Sbjct: 362 ---SHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNE 418
Query: 450 VVSWSEMICCNAHHGFANEALRI-FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
VV S + C+ HG A RI EL+ +S + L+ + + +GLR
Sbjct: 419 VVLGSLLGSCSV-HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLR 475
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 187/460 (40%), Gaps = 115/460 (25%)
Query: 41 LFDETP--------QRSIISCNSPASLLA-----FREARIAGLPVSDFTFAGVLAYCGST 87
LFDE P +++S S LL F E R + + D + + C
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKL 124
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKC------KRI---------------- 125
+L + HG + G+ + V N+L++MY KC KRI
Sbjct: 125 EDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
Query: 126 ---------EAARVLFDTCDELDDVSWNSIIAGYVRLGDGF-REVFELLARM-HRSGLDF 174
E R +F E + V+W ++AGY LG GF REV ELLA M R G
Sbjct: 185 DTVVKWEGLERGREVFHEMPERNAVAWTVMVAGY--LGAGFTREVLELLAEMVFRCGHGL 242
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL-------NSNMVVGTALLDMYAKTGC 227
+ TL S L AC +L +G+ +HV A+K ++ +++VGTAL+DMYAK G
Sbjct: 243 NFVTLCSMLSACAQSGNL-VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFS 287
+ ++ VF R N +N + +G G R + +F +M + + TF+
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMH-----GKGRMVIDMFPQM-IREVKPDDLTFT 355
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS---- 343
+++ AC S G +D+G RCF+S
Sbjct: 356 AVLSAC-----------------------------------SHSGIVDEGWRCFHSLRFY 380
Query: 344 --TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
PK+D + M+ G E A L+R+ P+E ++ S++G C+
Sbjct: 381 GLEPKVD--HYACMVDLLGRAGLIEEAEILMREMPVP---PNEVVLGSLLGSCSVHGKVE 435
Query: 402 SGEQIQGWALKFGISNF---IIVQNSQICMYAKSGDIDSA 438
E+I+ ++ N I++ N MY G D A
Sbjct: 436 IAERIKRELIQMSPGNTEYQILMSN----MYVAEGRSDIA 471
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 277/539 (51%), Gaps = 16/539 (2%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD 155
IHG+ + G + + + LI++Y K ++ AR LFD + D VSW ++I+ + R G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG- 92
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI--GKMLHVCAIKLDLNSNMV 213
+ L MHR + + +T GS LK+C K L C+ G +H K + N++
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSC---KDLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
V +ALL +YA+ G + +A L F+S + + +N MI G+ +C A + LF
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN---AC--ADTSFSLFQL 204
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M G FTF S+++A + + ++H K + SLV+ Y GS
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGS 264
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAG-CVENGKFETALSLLRQFMASGRKPDEFIMSSVMG 392
+ + + T K D++S T++I G +N A + + + K DE ++SS++
Sbjct: 265 LANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 393 VCADMAAARSGEQIQGWALKFGISNF-IIVQNSQICMYAKSGDIDSARLTFQEIENPDVV 451
+C +A+ G QI G+ALK F + + NS I MYAKSG+I+ A L F+E++ DV
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVR 384
Query: 452 SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM 511
SW+ +I HG +A+ ++ M IKPN +T L +L+ACSH G + G + ++ M
Sbjct: 385 SWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTM 444
Query: 512 KKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD-SGFAD-DPVMWRALLGACRVHKDT 569
+GI A +H +CI+D+L R+G LE+A I G W A L ACR H +
Sbjct: 445 INKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNV 504
Query: 570 MMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG-VKKEPGISWI 627
+ K A +++ +EP +Y+ L ++Y G AL RKLM++ G K PG S +
Sbjct: 505 QLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 229/498 (45%), Gaps = 41/498 (8%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFD +R ++S + P +LL F+E + + FT+ VL C
Sbjct: 69 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 128
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L+ G IHGSV G + V ++L+++Y++C ++E AR+ FD+ E D VSWN++I G
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 150 YV--RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
Y D +F+L M G +T GS L+A V K L + + LH AIKL
Sbjct: 189 YTANACADTSFSLFQL---MLTEGKKPDCFTFGSLLRASIVVKCLEIVSE-LHGLAIKLG 244
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREA 267
+ + +L++ Y K G L +A + E + + +I GF Q+ + +A
Sbjct: 245 FGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCT----SDA 300
Query: 268 LGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN-LQCDEFVGCSLVD 326
+F +M + + SS++K C I GRQIH K + ++ D +G SL+D
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
Y+ G I+D + F + DV SWTS+IAG +G FE A+ L + KP++
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVT 420
Query: 387 MSSVMGVCADMAAARSGEQIQGWAL------KFGISNFIIVQNSQICMYAKSGDIDSARL 440
S++ C + +G+ GW + K GI + I M A+SG ++ A
Sbjct: 421 FLSLLSAC-----SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 441 TFQEIENPDVVS---WSEMI-CCNAHHGFANEALRIFELMTVSGIKP-NHITLLGVLTAC 495
+ E +S W + C H + +L+++ KP N+I L V A
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAA- 534
Query: 496 SHGGLVDEGLRYFEIMKK 513
G D L ++MK+
Sbjct: 535 --NGAWDNALNTRKLMKE 550
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 162/344 (47%), Gaps = 6/344 (1%)
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
++H +I SN+ + L+D+Y K G + A +F+ + + MI+ F +
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSR-- 90
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
CGY +AL LF EM + ++FT+ S++K+C +G + G QIH + K N +
Sbjct: 91 ---CGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGN 147
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
V +L+ Y+ G +++ F+S + D+VSW +MI G N +T+ SL + +
Sbjct: 148 LIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT 207
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
G+KPD F S++ + ++ G A+K G + S + Y K G + +
Sbjct: 208 EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLAN 267
Query: 438 ARLTFQEIENPDVVSWSEMICC-NAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
A + + D++S + +I + + ++A IF+ M K + + + +L C+
Sbjct: 268 AWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICT 327
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
V G + K I +V ++D+ ++G +EDA
Sbjct: 328 TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDA 371
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 276/547 (50%), Gaps = 43/547 (7%)
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS--DYTLGSALKACCVDKSLNCIGKML 199
SWN I G+ + +E F L +M R G S D+ L C D L+ +G M+
Sbjct: 120 SWNVTIRGFSE-SENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 200 --HVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
HV ++L+L S+ V A + M+A G + +A VF+ + +N +I G+ +
Sbjct: 179 LGHVLKLRLELVSH--VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK-- 234
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
G A +A+ ++ M+ G+ T +V +C +GD G++ + + + L+
Sbjct: 235 ---IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG------------------- 358
+ +L+D +S G I + R F++ K +VSWT+MI+G
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 359 ------------CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
V+ + + AL+L ++ S KPDE M + C+ + A G I
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFA 466
+ K+ +S + + S + MYAK G+I A F I+ + ++++ +I A HG A
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 467 NEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTC 526
+ A+ F M +GI P+ IT +G+L+AC HGG++ G YF MK + + +KH +
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 527 IVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHA 586
+VDLLGRAG LE+A R + D +W ALL CR+H + +G+ A +++EL+P
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
Query: 587 AASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMS 646
+ YVLL +Y +A + A R++M ++GV+K PG S IEV V F+V D+S P S
Sbjct: 592 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 651
Query: 647 QLIYSRL 653
+ IY RL
Sbjct: 652 EKIYDRL 658
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 206/503 (40%), Gaps = 81/503 (16%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
FT+ + C R LG I G VL ++ + V N+ I+M++ C +E AR +FD
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
D VSWN +I GY ++G+ + ++ + M G+ D T+ + +C + LN
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIY-VYKLMESEGVKPDDVTMIGLVSSCSMLGDLN- 274
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF- 253
GK + + L + + AL+DM++K G + +A +F++ + TMI+G+
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYA 334
Query: 254 ------LQRQ-------------------TVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
+ R+ +V ++AL LF EMQ + T
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
+ AC +G G IH I K +L + +G SLVD Y+ G+I + + F+ +
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
+++T++I G +G TA+S + + +G PDE ++ C
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC-------------- 500
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-----NPDVVSWSEMICCNAHH 463
G I + R F +++ NP + +S M+
Sbjct: 501 ---------------------CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG----LRYFEIMKKDYGITA 519
G EA R+ E M ++ + +L C G V+ G + E+ D GI
Sbjct: 540 GLLEEADRLMESMP---MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIY- 595
Query: 520 NVKHSTCIVDLLGRAGRLEDAKR 542
+ + G A EDAKR
Sbjct: 596 -----VLLDGMYGEANMWEDAKR 613
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 165/371 (44%), Gaps = 53/371 (14%)
Query: 41 LFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE+P R ++S N + ++ ++ G+ D T G+++ C +
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G+ + V G+ I ++N+L++M+SKC I AR +FD ++ VSW ++I+G
Sbjct: 273 LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG 332
Query: 150 YVRLG--DGFREVFE----------------------------LLARMHRSGLDFSDYTL 179
Y R G D R++F+ L M S + T+
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 180 GSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
L AC +L+ +G +H K L+ N+ +GT+L+DMYAK G +++A+ VF +
Sbjct: 393 IHCLSACSQLGALD-VGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 240 YHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF 299
N Y +I G G A A+ F EM G+ + TF ++ AC G
Sbjct: 452 TRNSLTYTAIIGGLALH-----GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 300 RAGRQIHAQICKK---NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSM 355
+ GR +Q+ + N Q + +VD G +++ R S P + D W ++
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHY--SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Query: 356 IAGCVENGKFE 366
+ GC +G E
Sbjct: 565 LFGCRMHGNVE 575
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 259 bits (661), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 168/617 (27%), Positives = 308/617 (49%), Gaps = 52/617 (8%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P R+ ++ N+ ++ F + R G+ + T + L+ +
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
+ G+ H +V GM+ + SL+N Y K IE A ++FD E D V+WN II+G
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
YV+ G + + M L + TL + + A ++L +GK + I+
Sbjct: 350 YVQQGL-VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK-LGKEVQCYCIRHSFE 407
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
S++V+ + ++DMYAK G + DA VF+S + ++NT++A + + G + EAL
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES-----GLSGEALR 462
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
LF MQ+ G+ + T++ I+ + + G + + Q+ +
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI--------------- 507
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
P L +SWT+M+ G V+NG E A+ LR+ SG +P+ F ++
Sbjct: 508 --------------IPNL--ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 390 VMGVCADMAAARSGEQIQGWALK-FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP 448
+ CA +A+ G I G+ ++ S+ + ++ S + MYAK GDI+ A F
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
++ + MI A +G EA+ ++ + G+KP++IT+ VL+AC+H G +++ + F
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
+ + ++H +VDLL AG E A R I + F D M ++L+ +C +
Sbjct: 672 TDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRK 731
Query: 569 TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
T + +++ +++E EP + +YV + N Y G +++R++M+ +G+KK+PG SWI+
Sbjct: 732 TELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Query: 629 VGSK--VHMFLVDDRSH 643
+ + VH+F+ +D++H
Sbjct: 792 ITGEEGVHVFVANDKTH 808
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 269/597 (45%), Gaps = 36/597 (6%)
Query: 8 SQPNPFIPSKFPFLLTLPFSNP-----VHSPIRTRTLHLFDETPQR-SIISCNSPASLLA 61
S P IP+K PF ++ S+ HSP T H + I S + +
Sbjct: 3 SLPFNTIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMD 62
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTG--MDGMIFVMNSLINMY 119
FR RI + +L C R+L G+ IH +L G ++ L+ Y
Sbjct: 63 FRNLRIG-----PEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFY 117
Query: 120 SKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG------DGFREVFELLARMHRSGLD 173
+KC +E A VLF + SW +II R+G GF E+ E + +
Sbjct: 118 AKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE-------NEIF 170
Query: 174 FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVL 233
++ + + KAC K + G+ +H +K L + V ++L DMY K G L DA
Sbjct: 171 PDNFVVPNVCKACGALK-WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 229
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
VF+ N +N ++ G++Q G EA+ LF +M+ G+ ++ T S+ + A
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQN-----GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
+G G+Q HA ++ D +G SL++FY G I+ F+ + DVV+W
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
+I+G V+ G E A+ + + K D ++++M A + G+++Q + ++
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
+ I++ ++ + MYAK G I A+ F D++ W+ ++ A G + EALR+F
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
M + G+ PN IT ++ + G VDE F M+ GI N+ T +++ + +
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQ 523
Query: 534 AGRLEDAKRFI---LDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAA 587
G E+A F+ +SG + L AC +G+ I +I H++
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 218/395 (55%), Gaps = 3/395 (0%)
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G +EA+GL GL T++ +++ C ++ G++IHAQ+ +E++
Sbjct: 90 GRLKEAVGLLWSS---GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLK 146
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
L+ Y+ G + F S D++ W +MI+G V+ G + L + +
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
PD++ +SV C+ + G++ +K I + IIV ++ + MY K
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 442 FQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLV 501
F ++ +V++W+ +I +HG +E L+ FE M G +PN +T L VLTAC+HGGLV
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 326
Query: 502 DEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
D+G +F MK+DYGI +H +VD LGRAGRL++A F++ S + P +W +LLG
Sbjct: 327 DKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLG 386
Query: 562 ACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
ACR+H + + + A + +EL+P +YV+ N Y G + A +VR+ M++ GVKK+
Sbjct: 387 ACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Query: 622 PGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
PG S IE+ +VH F+ DD SH +S+ IY ++ EM
Sbjct: 447 PGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 6/233 (2%)
Query: 162 ELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDM 221
E + + SGL T L+ C K GK +H + N + LL +
Sbjct: 94 EAVGLLWSSGLQVEPETYAVLLQECKQRKEYT-KGKRIHAQMFVVGFALNEYLKVKLLIL 152
Query: 222 YAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNC 281
YA +G L A ++F S + + +N MI+G++Q+ G +E L ++ +M+ +
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQK-----GLEQEGLFIYYDMRQNRIVP 207
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
++TF+S+ +AC A+ G++ HA + K+ ++ + V +LVD Y S DG R F
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC 394
+ +V++WTS+I+G +GK L + G +P+ V+ C
Sbjct: 268 DQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
+GL V T+A +L C + G+ IH + V G ++ L+ +Y+ ++
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
A +LF + D + WN++I+GYV+ G +F + M ++ + YT S +AC
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLF-IYYDMRQNRIVPDQYTFASVFRACS 220
Query: 188 VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYN 247
L GK H IK + SN++V +AL+DMY K +D VF+ N +
Sbjct: 221 ALDRLEH-GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWT 279
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
++I+G+ VS E L F +M+ G + TF ++ AC
Sbjct: 280 SLISGYGYHGKVS-----EVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 37 RTLHLFDETPQRSIISCN-----SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLR 91
R+L + D P ++IS L + + R + +TFA V C + L
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 92 LGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYV 151
G+ H ++ + I V ++L++MY KC +FD + ++W S+I+GY
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 152 RLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC----CVDKSLNCIGKMLHVCAIKLD 207
G EV + +M G + T L AC VDK H ++K D
Sbjct: 287 YHGK-VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE------HFYSMKRD 339
Query: 208 --LNSNMVVGTALLDMYAKTGCLTDA 231
+ A++D + G L +A
Sbjct: 340 YGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 283/604 (46%), Gaps = 25/604 (4%)
Query: 36 TRTLHLFDETPQRSIISCNSPA-----------SLLAFREARIAGLPVSDFTFAGVLAYC 84
T LFDE P+R + N+ + F G S T +L +C
Sbjct: 102 TSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFC 161
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G + G ++HG +G++ V N+LI+ YSKC + +A VLF + VSWN
Sbjct: 162 GQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWN 221
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
++I Y + G E + M ++ S T+ + L A + L+C+ +
Sbjct: 222 TMIGAYSQSGLQ-EEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCL-------VV 273
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
K + +++ V T+L+ Y++ GCL A ++ S + + ++++ + ++ G
Sbjct: 274 KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK-----GDM 328
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
A+ F + + L + I+ C G +H K L V L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASG-RKPD 383
+ YS F ++ + F + ++SW S+I+GCV++G+ TA + Q M +G PD
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
++S++ C+ + G+++ G+ L+ N V + I MYAK G+ A F+
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
I+ P +W+ MI + G + AL + M G+KP+ IT LGVL+AC+HGG VDE
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
G F M K++GI+ ++H +V LLGRA +A I D +W ALL AC
Sbjct: 569 GKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSAC 628
Query: 564 RVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPG 623
+H++ +G+++A ++ L+ YVL+ N+Y + VR +M+D G G
Sbjct: 629 IIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLG 688
Query: 624 ISWI 627
+S I
Sbjct: 689 VSQI 692
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 211/465 (45%), Gaps = 18/465 (3%)
Query: 37 RTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVL-AYCGSTRNLRLG-E 94
R L F + I S + + FR+ + L + FT + L A S + +L E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 95 AIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG 154
+ + +G+D ++V SL+N+Y K + +A++LFD E D V WN++I GY R
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR-- 128
Query: 155 DGFR-EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
+G+ + ++L M + G S TL + L C G+ +H A K L +
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCG-QCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
V AL+ Y+K L A ++F + + +NTMI + Q G EA+ +F
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS-----GLQEEAITVFKN 242
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M + S T +++ A V + +H + K + D V SLV YS G
Sbjct: 243 MFEKNVEISPVTIINLLSAHV------SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGC 296
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
+ R + S + +V TS+++ E G + A+ + K D + ++
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 394 CADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSW 453
C + G + G+A+K G+ +V N I MY+K D+++ F++++ ++SW
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 454 SEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLTACSH 497
+ +I G A+ A +F ++M G+ P+ IT+ +L CS
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 127/295 (43%), Gaps = 13/295 (4%)
Query: 279 LNCSKFTFSSIVKACV-AIGDFRAG-RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDD 336
L + FT S ++A + F+ Q+ + K L +V SL++ Y G +
Sbjct: 44 LTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS 103
Query: 337 GIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
F+ P+ D V W ++I G NG A L + G P + +++ C
Sbjct: 104 AQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ 163
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEM 456
G + G A K G+ V+N+ I Y+K ++ SA + F+E+++ VSW+ M
Sbjct: 164 CGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTM 223
Query: 457 ICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA-CSHGGLVDEGLRYFEIMKKDY 515
I + G EA+ +F+ M ++ + +T++ +L+A SH L +
Sbjct: 224 IGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL--------HCLVVKC 275
Query: 516 GITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTM 570
G+ ++ T +V R G L A+R L + D ++ + +C K M
Sbjct: 276 GMVNDISVVTSLVCAYSRCGCLVSAER--LYASAKQDSIVGLTSIVSCYAEKGDM 328
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 185/639 (28%), Positives = 290/639 (45%), Gaps = 94/639 (14%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLF 132
++ L C S+ ++ G IH VL +G+D ++ NS++NMY+KC+ + A +F
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 133 DTCDELDDVSWNSIIAGYVR---LGDGFR---------------------------EVFE 162
+LD S+N ++ GYVR L D + E E
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 163 LLARMHRSGLDFSDYTLGSALKACC-VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDM 221
L M G+ ++ TL + + AC + +C +ML AIKL L + V T LL M
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDC--RMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 222 YAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF----------------LQRQTVSCGYA- 264
Y CL DA +F+ N +N M+ G+ ++ VS G
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 265 ---------REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
EAL + EM G+ S+ ++ A G Q+H I K+
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 316 CDEFVGCSLVDFYS-----------FFGSIDDGI--------------------RCFNST 344
C +F+ +++ FY+ F S+ D I F+ T
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSG 403
D+ SW +MI+G ++ + AL L R+ ++S + KPD M SV + + + G
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN---PDVVSWSEMICCN 460
++ + I + + I MYAK G I++A F + +N + W+ +IC +
Sbjct: 458 KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS 517
Query: 461 AHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITAN 520
A HG A AL ++ + IKPN IT +GVL+AC H GLV+ G YFE MK D+GI +
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Query: 521 VKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVI 580
+KH C+VDLLG+AGRLE+AK I D ++W LL A R H + + + A +
Sbjct: 578 IKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELA 637
Query: 581 ELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
++P V+L N+Y DAG+ + VR+ M+ + V+
Sbjct: 638 AIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 197/467 (42%), Gaps = 97/467 (20%)
Query: 169 RSGLDFS------DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMY 222
R+ DFS + L SAL +C + C G+ +H +K L+SN + ++L+MY
Sbjct: 28 RTHFDFSGESSDTERALVSALGSCASSNDVTC-GRQIHCRVLKSGLDSNGYICNSVLNMY 86
Query: 223 AKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTV-------------SC-------- 261
AK L DA VF + +N M+ G+++ + + SC
Sbjct: 87 AKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIK 146
Query: 262 GYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
GYA+ EA+ LF EM+ LG+ ++ T ++++ AC +G R + + K L+
Sbjct: 147 GYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG 206
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----------------------------- 347
FV +L+ Y + D + F+ P+
Sbjct: 207 RVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT 266
Query: 348 --DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
D+VSW +MI GC+ + + AL + + G KP E +M ++ A + G Q
Sbjct: 267 EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQ 326
Query: 406 IQGWALKFG-------------------------------ISNFIIVQNSQICMYAKSGD 434
+ G +K G + + I +N+ I + K+G
Sbjct: 327 LHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGM 386
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLT 493
++ AR F + + D+ SW+ MI A AL +F E+++ S +KP+ IT++ V +
Sbjct: 387 VEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFS 446
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
A S G ++EG R + + I N + I+D+ + G +E A
Sbjct: 447 AISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETA 492
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 275/550 (50%), Gaps = 11/550 (2%)
Query: 96 IHGSVLVTG--MDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
IH V+ TG ++G + LI + I AR +FD + +NS+I Y R
Sbjct: 36 IHAFVISTGNLLNGS-SISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR- 93
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
G EV L +M + T +KAC L G+ + A+ +++
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLE-KGEAVWCKAVDFGYKNDVF 152
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
V +++L++Y K G + +A ++F + + TM+ GF Q G + +A+ + E
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQ-----AGKSLKAVEFYRE 207
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
MQ G + +++A +GD + GR +H + + L + V SLVD Y+ G
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
I+ R F+ VSW S+I+G +NG A + + + G +PD + V+
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Query: 394 CADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSW 453
C+ + + ++G + + LK + + + + + MY+K G + S+R F+ + D+V W
Sbjct: 328 CSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCW 386
Query: 454 SEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK 513
+ MI C HG E + +F MT S I+P+H T +L+A SH GLV++G +F +M
Sbjct: 387 NTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN 446
Query: 514 DYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGK 573
Y I + KH C++DLL RAGR+E+A I + +W ALL C H++ +G
Sbjct: 447 KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGD 506
Query: 574 HIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKV 633
A+++++L P + L+ N + A K K +VRKLM++ ++K PG S IEV ++
Sbjct: 507 IAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGEL 566
Query: 634 HMFLVDDRSH 643
FL++D SH
Sbjct: 567 RTFLMEDLSH 576
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 26/382 (6%)
Query: 41 LFDETPQRSIISCNS----------PASLLAFREARIA-GLPVSDFTFAGVLAYCGSTRN 89
+FDE PQR + NS P +L + IA + TF + C S
Sbjct: 72 VFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLV 131
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L GEA+ + G +FV +S++N+Y KC +++ A VLF + D + W +++ G
Sbjct: 132 LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
+ + G + V E M G + L+A D +G+ +H + L
Sbjct: 192 FAQAGKSLKAV-EFYREMQNEGFGRDRVVMLGLLQASG-DLGDTKMGRSVHGYLYRTGLP 249
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
N+VV T+L+DMYAK G + A VF + + ++I+GF Q G A +A
Sbjct: 250 MNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN-----GLANKAFE 304
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
EMQ LG T ++ AC +G + GR +H I K+++ D +L+D YS
Sbjct: 305 AVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYS 363
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
G++ F + D+V W +MI+ +G + +SL + S +PD +S
Sbjct: 364 KCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFAS 423
Query: 390 VMGVCADMAAARSG--EQIQGW 409
++ A + SG EQ Q W
Sbjct: 424 LLS-----ALSHSGLVEQGQHW 440
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 253 bits (646), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/634 (26%), Positives = 298/634 (47%), Gaps = 61/634 (9%)
Query: 30 VHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREAR------IAGLPVSDFTFAGVLAY 83
+ P T +LHL+ Q I+ N+ A++ + R A L ++ ++
Sbjct: 726 IFQPKATNSLHLYR---QSQILYMNAFANVHSLRVPSHHLRDFSASLSLAPPNLKKIIKQ 782
Query: 84 CGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSW 143
C + + L E+ +++ T ++ +MN I + KR++ A E + +
Sbjct: 783 CSTPK---LLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVY 839
Query: 144 NSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA 203
N++ G+V R + EL RM R + S YT S +KA G+ L
Sbjct: 840 NALFKGFVTCSHPIRSL-ELYVRMLRDSVSPSSYTYSSLVKASSFASRF---GESLQAHI 895
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGY 263
K ++ + T L+D Y+ TG + +A VF+ +D + T
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTT--------------- 940
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
+V A + D + + Q+ +KN E
Sbjct: 941 -------------------------MVSAYRRVLDMDSANSLANQMSEKN----EATSNC 971
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD 383
L++ Y G+++ FN P D++SWT+MI G +N ++ A+++ + M G PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
E MS+V+ CA + G+++ + L+ G + + ++ + MY+K G ++ A L F
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
+ ++ W+ +I A HGFA EAL++F M + +KPN +T + V TAC+H GLVDE
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
G R + M DY I +NV+H +V L +AG + +A I + F + V+W ALL C
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGC 1211
Query: 564 RVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE-P 622
R+HK+ ++ + ++++ LEP + Y LL ++Y + + + E+R M++ G++K P
Sbjct: 1212 RIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICP 1271
Query: 623 GISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
G S I + + H+F D+SH S + L+E+
Sbjct: 1272 GTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1305
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/612 (29%), Positives = 291/612 (47%), Gaps = 38/612 (6%)
Query: 39 LHLFDETPQRS--------IISCNSPA----SLLAFREARIAGLPVSDFTFAGVLAYCGS 86
+FD+ P+R I C S+ FRE G+ F FA +L+ C
Sbjct: 143 FEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-D 201
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL--DDVSWN 144
+L G+ +H V+ G V+N+LI MY C+ + A ++F+ D D V++N
Sbjct: 202 YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 145 SIIAGYVRLGDGFREVFELLA--RMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVC 202
+I G GF+ LL +M + L +D T S + +C S +G +H
Sbjct: 262 VVIDGLA----GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC----SCAAMGHQVHGL 313
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
AIK +V A + MY+ A VFES + +NTMI+ + Q +
Sbjct: 314 AIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK----- 368
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
+ A+ ++ M ++G+ +FTF S++ + D + A I K L +
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISN 425
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK- 381
+L+ YS G I+ F + + +++SW ++I+G NG L + S +
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRI 485
Query: 382 -PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL 440
PD + +S+++ +C ++ G Q + L+ G ++ N+ I MY++ G I ++
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLE 545
Query: 441 TFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITLLGVLTACSHGG 499
F ++ DVVSW+ +I + HG A+ ++ M G + P+ T VL+ACSH G
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 500 LVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF--ILDSGFADDPVMWR 557
LV+EGL F M + +G+ NV H +C+VDLLGRAG L++A+ I + +W
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 558 ALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG 617
AL AC H D +GK +A ++E E + YV L NIY AG K A E R+ + G
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIG 725
Query: 618 VKKEPGISWIEV 629
K+ G SW+ +
Sbjct: 726 AMKQRGCSWMRL 737
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 211/468 (45%), Gaps = 28/468 (5%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVS-WNSIIAGYVRLGDGFREV-FELLAR 166
++ +L++ K IE A +FD E DDV+ WN++I G G+ E EL
Sbjct: 123 VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKE--SGYHETSVELFRE 180
Query: 167 MHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
MH+ G+ + + L C D GK +H IK V AL+ MY
Sbjct: 181 MHKLGVRHDKFGFATILSMC--DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 227 CLTDAVLVFES--FRYHNDFMYNTMIAGFLQRQTVSCGYAR-EALGLFCEMQMLGLNCSK 283
+ DA LVFE + +N +I G G+ R E+L +F +M L +
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGL-------AGFKRDESLLVFRKMLEASLRPTD 291
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS 343
TF S++ +C G Q+H K + V + + YS F + F S
Sbjct: 292 LTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
+ D+V+W +MI+ + ++A+S+ ++ G KPDEF S++ D+
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL--- 405
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHH 463
E +Q +KFG+S+ I + N+ I Y+K+G I+ A L F+ +++SW+ +I H+
Sbjct: 406 EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN 465
Query: 464 GFANEALRIFELMTVSGIK--PNHITLLGVLTAC-SHGGLVDEGLRYFEIMKKDYGITAN 520
GF E L F + S ++ P+ TL +L+ C S L+ + +++ +G
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR--HGQFKE 523
Query: 521 VKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
++++ + G ++++ + + D V W +L+ A H +
Sbjct: 524 TLIGNALINMYSQCGTIQNSLE-VFNQMSEKDVVSWNSLISAYSRHGE 570
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 39/271 (14%)
Query: 262 GYAREALGLFCEMQM-LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
G R AL LF ++ L +++ S + + D G Q+H + L C V
Sbjct: 35 GENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHV 94
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS-------------------------- 354
+L+ Y G++ + F+ + DV SWT+
Sbjct: 95 SNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDD 154
Query: 355 ------MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
MI GC E+G ET++ L R+ G + D+F ++++ +C D + G+Q+
Sbjct: 155 VAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHS 213
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP--DVVSWSEMICCNAHHGFA 466
+K G V N+ I MY + A L F+E + D V+++ +I + GF
Sbjct: 214 LVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI--DGLAGFK 271
Query: 467 -NEALRIFELMTVSGIKPNHITLLGVLTACS 496
+E+L +F M + ++P +T + V+ +CS
Sbjct: 272 RDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF-MASGRKPDEFIMSSVMGVCADMAAA 400
NST L++ + G +G+ AL L + +PD++ +S + +
Sbjct: 17 NSTTLLNL---NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDT 73
Query: 401 RSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCN 460
G Q+ +A++ G+ V N+ + +Y + G++ S + F EI+ PDV SW+ ++ +
Sbjct: 74 IFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSAS 133
Query: 461 AHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK 513
G A +F+ M + + ++T C G + + F M K
Sbjct: 134 FKLGDIEYAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHK 183
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 271/508 (53%), Gaps = 31/508 (6%)
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
LFD + D S NS ++ ++R G+ + L ++HR+ D S +T L AC +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNP-NDTLALFLQIHRASPDLSSHTFTPVLGACSL-L 97
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMI 250
S G+ +H IK + + TAL+DMY+K G L D+V VFES + +N ++
Sbjct: 98 SYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 251 AGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
+GFL+ G +EALG+F M + S+FT SS+VK C ++ + G+Q+HA +
Sbjct: 158 SGFLRN-----GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS-TPKLDVVSWTSMIAGCVENGKFETAL 369
+G +++ FYS G I++ ++ +NS D V S+I+GC+ N ++ A
Sbjct: 213 VTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC-- 427
L+ S ++P+ ++SS + C+D + G+QI AL+ G V +S++C
Sbjct: 272 LLM-----SRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF-----VSDSKLCNG 321
Query: 428 ---MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM--TVSGIK 482
MY K G I AR F+ I + VVSW+ MI A +G +AL IF M SG+
Sbjct: 322 LMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVL 381
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
PN +T L V++AC+H GLV EG F +MK+ Y + +H C +D+L +AG E+ R
Sbjct: 382 PNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWR 441
Query: 543 FI---LDSGFADDP-VMWRALLGACRVHKDTMMGKHIADRVI-ELEPHAAASYVLLYNIY 597
+ +++ P +W A+L AC ++ D G+++A R++ E P A+ YVL+ N Y
Sbjct: 442 LVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 598 NDAGKEKRALEVRKLMQDQGVKKEPGIS 625
GK E+R ++++G+ K G S
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 175/389 (44%), Gaps = 31/389 (7%)
Query: 36 TRTLHLFDETPQRSII-----------SCNSPASLLAFREARIAGLPVSDFTFAGVLAYC 84
T HLFDE PQR + S N +L F + A +S TF VL C
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G +H ++ G + +LI+MYSK + + +F++ +E D VSWN
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH--VC 202
++++G++R G G +E + A M+R ++ S++TL S +K C K L GK +H V
Sbjct: 155 ALLSGFLRNGKG-KEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQ-QGKQVHAMVV 212
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND-FMYNTMIAGFLQRQTVSC 261
DL +V+GTA++ Y+ G + +A+ V+ S H D M N++I+G ++ +
Sbjct: 213 VTGRDL---VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNY-- 267
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
+EA L + + SS + C D G+QIH + D +
Sbjct: 268 ---KEAFLLMSRQRP-----NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF--MASG 379
L+D Y G I F + P VVSWTSMI NG AL + R+ SG
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSG 379
Query: 380 RKPDEFIMSSVMGVCADMAAARSGEQIQG 408
P+ V+ CA + G++ G
Sbjct: 380 VLPNSVTFLVVISACAHAGLVKEGKECFG 408
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 172/600 (28%), Positives = 285/600 (47%), Gaps = 66/600 (11%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLF 132
+ FTF +L C ++ G +H V+ TG +F +L++MY K K++ A +
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 133 DTCDELDDVSWNSIIAGYVRLGDGF-REVFELLARMHRSGLDFSDYTLGSALKACCVDKS 191
D E S N+ ++G L +GF R+ F + SG + T+ S L C +
Sbjct: 90 DEMPERGIASVNAAVSGL--LENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 192 LNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIA 251
G LH A+K + VGT+L+ MY++ G A +FE + + YN I+
Sbjct: 148 ----GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 252 GFLQRQTVSCGYAREALGLFCEMQMLGLN-CSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
G ++ G +F M+ + TF + + AC ++ + + GRQ+H +
Sbjct: 204 GLMEN-----GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVM 258
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST--------PKLDVVSWTSMIAGCVEN 362
KK Q + VG +L+D YS RC+ S +++SW S+I+G + N
Sbjct: 259 KKEFQFETMVGTALIDMYS-------KCRCWKSAYIVFTELKDTRNLISWNSVISGMMIN 311
Query: 363 GKFETALSLLRQFMASGRKPDEFI-----------------------------------M 387
G+ ETA+ L + + G KPD +
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
+S++ C+D+ ++G++I G +K I V S I MY K G AR F E
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 448 P--DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
D V W+ MI HG A+ IFEL+ ++P+ T VL+ACSH G V++G
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
+ F +M+++YG + +H C++DLLGR+GRL +AK ++D ++ +LLG+CR
Sbjct: 492 QIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE-VIDQMSEPSSSVYSSLLGSCRQ 550
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
H D ++G+ A ++ ELEP A +V+L +IY + + +R+++ + + K PG+S
Sbjct: 551 HLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 186/418 (44%), Gaps = 54/418 (12%)
Query: 36 TRTLHLFDETPQRSIISCNSPASLL--------AFR---EARIAGLPVSDFTFAGVLAYC 84
T L + DE P+R I S N+ S L AFR +AR++G ++ T A VL C
Sbjct: 83 TDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G ++ G +H + +G + ++V SL++MYS+C A +F+ V++N
Sbjct: 143 G---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 145 SIIAGYVRLG--DGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVC 202
+ I+G + G + VF L+ + S + +D T +A+ AC +L G+ LH
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKF--SSEEPNDVTFVNAITACASLLNLQ-YGRQLHGL 256
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR-YHNDFMYNTMIAGFL---QRQT 258
+K + +VGTAL+DMY+K C A +VF + N +N++I+G + Q +T
Sbjct: 257 VMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHET 316
Query: 259 V---------------------------SCGYAREALGLFCEMQMLGLNCSKFTFSSIVK 291
G EA F M + + S +S++
Sbjct: 317 AVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLS 376
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFN---STPKLD 348
AC I + G++IH + K + D FV SL+D Y G R F+ PK D
Sbjct: 377 ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPK-D 435
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
V W MI+G ++G+ E+A+ + +P ++V+ C+ G QI
Sbjct: 436 PVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 274/542 (50%), Gaps = 21/542 (3%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+L G AIH + G+ G + V SL++MYSKC +E A LF ++ D VSW+++IA
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
Y + G E L M R + + TL S L+ C + + +GK +H AIK D+
Sbjct: 375 SYEQAGQ-HDEAISLFRDMMRIHIKPNAVTLTSVLQGC-AGVAASRLGKSIHCYAIKADI 432
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
S + TA++ MYAK G + A+ FE + +N + G+ Q G A +A
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQ-----IGDANKAF 487
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
++ M++ G+ T +++ C D+ G ++ QI K + V +L++ +
Sbjct: 488 DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMF 547
Query: 329 SFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
+ ++ I F+ + VSW M+ G + +G+ E A++ RQ +P+
Sbjct: 548 TKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTF 607
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
+++ A+++A R G + ++ G + V NS + MYAK G I+S+ F EI N
Sbjct: 608 VNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN 667
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
+VSW+ M+ A HG A+ A+ +F M + +KP+ ++ L VL+AC H GLV+EG R
Sbjct: 668 KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHK 567
FE M + + I A V+H C+VDLLG+AG +A + +W ALL + R+H
Sbjct: 728 FEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHC 787
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
+ + ++++LEP + Y +++R EV + + +KK P SWI
Sbjct: 788 NLWLSNAALCQLVKLEPLNPSHY----------SQDRRLGEVNNVSR---IKKVPACSWI 834
Query: 628 EV 629
EV
Sbjct: 835 EV 836
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 233/500 (46%), Gaps = 14/500 (2%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
G+ ++F L C + + + G IH + G++ +++ +L+ MY K + + +A
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 129 RVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC- 187
R +FD D V+WN++++G + G + L M +D +L + + A
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL-LFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 188 VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYN 247
++KS C + LH IK + L+DMY L A VFE ++ +
Sbjct: 214 LEKSDVC--RCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWG 269
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
TM+A + G+ E L LF M+ + +K +S ++A +GD G IH
Sbjct: 270 TMMAAYAHN-----GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHD 324
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
++ L D V SL+ YS G ++ + F + DVVSW++MIA + G+ +
Sbjct: 325 YAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE 384
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
A+SL R M KP+ ++SV+ CA +AA+R G+ I +A+K I + + + I
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVIS 444
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
MYAK G A F+ + D V+++ + G AN+A +++ M + G+ P+ T
Sbjct: 445 MYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRT 504
Query: 488 LLGVLTACSHGGLVDEG-LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD 546
++G+L C+ G Y +I+K + +V H+ ++++ + L A
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHA--LINMFTKCDALAAAIVLFDK 562
Query: 547 SGFADDPVMWRALLGACRVH 566
GF V W ++ +H
Sbjct: 563 CGFEKSTVSWNIMMNGYLLH 582
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 208/459 (45%), Gaps = 25/459 (5%)
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
+N R +HGS++V+G+ N LIN YS +R + +RV+FD+ + V WNS+I
Sbjct: 16 KNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMI 71
Query: 148 AGYVRLGDGFREVFELLARM-HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
GY R G RE M G+D Y+ ALKAC G +H ++
Sbjct: 72 RGYTRAG-LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFK-KGLRIHDLIAEM 129
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
L S++ +GTAL++MY K L A VF+ + +NTM++G Q G +
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQN-----GCSSA 184
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
AL LF +M+ ++ + +++ A + R +H + KK G L+D
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LID 242
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALS---LLRQFMASGRKPD 383
Y + F + D SW +M+A NG FE L L+R + K
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
D+ G I +A++ G+ + V S + MY+K G+++ A F
Sbjct: 303 AASALQAAAYVGDLV---KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS--HGGLV 501
IE+ DVVSWS MI G +EA+ +F M IKPN +TL VL C+ +
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 502 DEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
+ + + I K D I + ++ +T ++ + + GR A
Sbjct: 420 GKSIHCYAI-KAD--IESELETATAVISMYAKCGRFSPA 455
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 12/348 (3%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
FR+ + + T VL C RLG++IH + ++ + ++I+MY+K
Sbjct: 389 FRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAK 448
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
C R A F+ D V++N++ GY ++GD + F++ M G+ T+
Sbjct: 449 CGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDA-NKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 182 ALKAC--CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
L+ C C D + G ++ IK +S V AL++M+ K L A+++F+
Sbjct: 508 MLQTCAFCSDYAR---GSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 240 YHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
+ + +N M+ G+L G A EA+ F +M++ + TF +IV+A +
Sbjct: 565 FEKSTVSWNIMMNGYLLH-----GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSA 619
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG 358
R G +H+ + + VG SLVD Y+ G I+ +CF +VSW +M++
Sbjct: 620 LRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSA 679
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
+G A+SL + KPD SV+ C G++I
Sbjct: 680 YAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 19/288 (6%)
Query: 38 TLHLFDETPQRSIISCNSPA-----------SLLAFREARIAGLPVSDFTFAGVLAYCGS 86
L F+ P + ++ N+ A + ++ ++ G+ T G+L C
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAF 514
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD-ELDDVSWNS 145
+ G ++G ++ G D V ++LINM++KC + AA VLFD C E VSWN
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNI 574
Query: 146 IIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
++ GY+ G E +M + T + ++A +L +G +H I+
Sbjct: 575 MMNGYLLHGQA-EEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALR-VGMSVHSSLIQ 632
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
S VG +L+DMYAK G + + F +NTM++ + SC
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC---- 688
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
A+ LF MQ L +F S++ AC G G++I ++ +++
Sbjct: 689 -AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERH 735
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 255/509 (50%), Gaps = 41/509 (8%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMY-AKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
K +H IK L S+ V + +L A + A LVF + N F++NT+I GF +
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 256 RQTVSCGYAREALGLFCEM--QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
+ A+ +F +M + + T+ S+ KA +G R GRQ+H + K+
Sbjct: 102 SS-----FPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 314 LQCDEFV-----------GCSLVDFYSFF---------------------GSIDDGIRCF 341
L+ D F+ GC L++ + F G ID F
Sbjct: 157 LEDDSFIRNTMLHMYVTCGC-LIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
+ P+ + VSW SMI+G V NG+F+ AL + R+ KPD F M S++ CA + A+
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 402 SGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNA 461
G I + ++ IV + I MY K G I+ F+ + W+ MI A
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 462 HHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
++GF A+ +F + SG++P+ ++ +GVLTAC+H G V +F +MK+ Y I ++
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 522 KHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE 581
KH T +V++LG AG LE+A+ I + +D V+W +LL ACR + M K A + +
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK 455
Query: 582 LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDR 641
L+P YVLL N Y G + A+E R LM+++ ++KE G S IEV +VH F+
Sbjct: 456 LDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGG 515
Query: 642 SHPMSQLIYSRLEEMLVKINKIEFGDEKL 670
+HP S IYS L+ + ++ I+ G +L
Sbjct: 516 THPKSAEIYSLLDILNWDVSTIKSGFAEL 544
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 137/327 (41%), Gaps = 40/327 (12%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCK-RIEAARVLFD 133
T+ V G R G +HG V+ G++ F+ N++++MY C IEA R+
Sbjct: 127 LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG 186
Query: 134 TCDELDDVSWNSIIAGYVRLG---------------DG---------------FREVFEL 163
D V+WNS+I G+ + G +G F++ ++
Sbjct: 187 MIG-FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDM 245
Query: 164 LARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYA 223
M + +T+ S L AC + G+ +H ++ N +V TAL+DMY
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASE-QGRWIHEYIVRNRFELNSIVVTALIDMYC 304
Query: 224 KTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSK 283
K GC+ + + VFE +N+MI G G+ A+ LF E++ GL
Sbjct: 305 KCGCIEEGLNVFECAPKKQLSCWNSMILGLANN-----GFEERAMDLFSELERSGLEPDS 359
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL-VDFYSFFGSIDDGIRCFN 342
+F ++ AC G+ + + +K + +L V+ G +++
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 343 STP-KLDVVSWTSMIAGCVENGKFETA 368
+ P + D V W+S+++ C + G E A
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 140/335 (41%), Gaps = 37/335 (11%)
Query: 40 HLFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTR 88
+LFDE PQR+ +S NS S L FRE + + FT +L C
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
G IH ++ + V+ +LI+MY KC IE +F+ + WNS+I
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 149 GYVRLGDGFRE-VFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
G +GF E +L + + RSGL+ + L AC ++ + + K
Sbjct: 333 GLA--NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND-FMYNTMIAGFLQRQTVSCGYARE 266
+ ++ T ++++ G L +A + ++ D +++++++ R+ + A+
Sbjct: 391 IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSAC--RKIGNVEMAKR 448
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL-- 324
A ++ C S+ A + G F + ++ K Q ++ VGCS
Sbjct: 449 AAKCLKKLDP-DETCGYVLLSN---AYASYGLFEEA--VEQRLLMKERQMEKEVGCSSIE 502
Query: 325 VDFYSFFGSIDDGIRCFNSTPK-------LDVVSW 352
VDF + + I C + PK LD+++W
Sbjct: 503 VDF-----EVHEFISCGGTHPKSAEIYSLLDILNW 532
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 247/497 (49%), Gaps = 35/497 (7%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K H I LN + + ++ + G L A VF N +++NTMI
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
+ A+ ++ ++ L FTF ++K V + D GRQIH Q+
Sbjct: 92 DEPNAHSI--AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 149
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV--------------------------- 349
V L+ Y G + D + F+ DV
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 350 ------VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
VSWT +I+G ++G+ A+ + ++ + +PDE + +V+ CAD+ + G
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 269
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHH 463
E+I + G++ + + N+ I MYAKSG+I A F+ + +VV+W+ +I A H
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 329
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKH 523
G EAL +F M +G++PN +T + +L+ACSH G VD G R F M+ YGI N++H
Sbjct: 330 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH 389
Query: 524 STCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELE 583
C++DLLGRAG+L +A I F + +W +LL A VH D +G+ +I+LE
Sbjct: 390 YGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLE 449
Query: 584 PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSH 643
P+ + +Y+LL N+Y++ G+ + +R +M+ GVKK G S IEV ++V+ F+ D +H
Sbjct: 450 PNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTH 509
Query: 644 PMSQLIYSRLEEMLVKI 660
P + I+ L+EM ++I
Sbjct: 510 PQVERIHEILQEMDLQI 526
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 155/365 (42%), Gaps = 34/365 (9%)
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
G+ +H + +S++ V T L+ MY G L DA +F+ + ++N ++AG+ +
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 256 ------------------RQTVS-----CGYAR-----EALGLFCEMQMLGLNCSKFTFS 287
R VS GYA+ EA+ +F M M + + T
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
+++ AC +G G +I + + + + + +++D Y+ G+I + F +
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI- 406
+VV+WT++IAG +G AL++ + + +G +P++ +++ C+ + G+++
Sbjct: 315 NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICC-NAHHG 464
K+GI I I + ++G + A + + + W ++ N HH
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 434
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
+ EL+ + + LL L S+ G DE R M K G+ S
Sbjct: 435 LELGERALSELIKLEPNNSGNYMLLANLY--SNLGRWDES-RMMRNMMKGIGVKKMAGES 491
Query: 525 TCIVD 529
+ V+
Sbjct: 492 SIEVE 496
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
S + ++ F+ + + + T VL+ C +L LGE I V GM+ + +
Sbjct: 228 SGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSL 287
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
N++I+MY+K I A +F+ +E + V+W +IIAG G G E + RM ++G
Sbjct: 288 NNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG-AEALAMFNRMVKAG 346
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
+ +D T + L AC ++ ++ + K ++ N+ ++D+ + G L +A
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 232 VLVFESFRYH-NDFMYNTMIAG 252
V +S + N ++ +++A
Sbjct: 407 DEVIKSMPFKANAAIWGSLLAA 428
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/567 (29%), Positives = 271/567 (47%), Gaps = 23/567 (4%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR---IEAARVLFD 133
+ +L+ + R+L +HG ++ + + + ++ LI+ + C + AR +F+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 134 TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN 193
+ D WNS+I GY + + + M R G +T LKAC + +
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALI-FYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 124
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
G +H +K NM V T LL MY G + + VFE N + ++I+GF
Sbjct: 125 -FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 254 LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
+ S +A+ F EMQ G+ ++ ++ AC D G+ H + +
Sbjct: 184 VNNNRFS-----DAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL--QG 236
Query: 314 LQCDEF----------VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
L D + + SL+D Y+ G + F+ P+ +VSW S+I G +NG
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
E AL + + G PD+ SV+ ++ G+ I + K G +
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC 356
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IK 482
+ + MYAK+GD +SA+ F+++E D ++W+ +I A HG NEAL IF+ M G
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
P+ IT LGVL ACSH GLV+EG RYF M+ +G+ V+H C+VD+L RAGR E+A+R
Sbjct: 417 PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAER 476
Query: 543 FILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGK 602
+ + +W ALL C +H++ + I V E E + YVLL NIY AG+
Sbjct: 477 LVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGR 536
Query: 603 EKRALEVRKLMQDQGVKKEPGISWIEV 629
+R+ M+ + V K G S +E
Sbjct: 537 WADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 186/396 (46%), Gaps = 16/396 (4%)
Query: 19 PFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFA 78
P + L ++ V I ++++++ + S N +L+ ++E G FTF
Sbjct: 52 PETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFP 111
Query: 79 GVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL 138
VL C R+++ G +HG V+ TG + ++V L++MY C + +F+ +
Sbjct: 112 YVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
+ V+W S+I+G+V + F + E M +G+ ++ + L AC K + GK
Sbjct: 172 NVVAWGSLISGFVN-NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDI-VTGKW 229
Query: 199 LHVCAIKLDLNS--------NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMI 250
H L + N+++ T+L+DMYAK G L A +F+ +N++I
Sbjct: 230 FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSII 289
Query: 251 AGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
G+ Q G A EAL +F +M LG+ K TF S+++A + G + G+ IHA +
Sbjct: 290 TGYSQN-----GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALS 370
K D + C+LV+ Y+ G + + F K D ++WT +I G +G ALS
Sbjct: 345 KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALS 404
Query: 371 LLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQ 405
+ ++ G PD V+ C+ + G++
Sbjct: 405 IFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 440
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 162/568 (28%), Positives = 263/568 (46%), Gaps = 57/568 (10%)
Query: 40 HLFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTR 88
+F++ P +S+ + N SLL FRE G +++ +F GVL +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+L + + +H S G+D I V+NSLI+ Y KC A +F D VSWN+II
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
+ + + +L M G + T S L + + L+C G+ +H IK
Sbjct: 290 ATAKSENPLK-ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC-GRQIHGMLIKNGC 347
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+ +V+G AL+D YAK G L D+ L F+ R N +N +++G+ + C L
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC------L 401
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV--- 325
LF +M +G +++TFS+ +K+C +Q+H+ I + + +++V SL+
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCCVT----ELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 326 -----------------------------DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
YS G + ++ ++ + D VSW I
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
A C + E + L + + S +PD++ S++ +C+ + G I G K S
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 417 -NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
V N I MY K G I S F+E ++++W+ +I C HG+ EAL F+
Sbjct: 578 CADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKE 637
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
G KP+ ++ + +LTAC HGG+V EG+ F+ M KDYG+ + H C VDLL R G
Sbjct: 638 TLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNG 696
Query: 536 RLEDAKRFILDSGFADDPVMWRALLGAC 563
L++A+ I + F D +WR L C
Sbjct: 697 YLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 19/392 (4%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMH 168
++V N++I++Y K + A +FD E + VS+N+II GY + GD + + + + M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGD-VDKAWGVFSEMR 107
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL-NSNMVVGTALLDMYAKTGC 227
G + T+ L +D G LH ++K L ++ VGT LL +Y +
Sbjct: 108 YFGYLPNQSTVSGLLSCASLDVR---AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFS 287
L A VFE + + +N M++ R G+ +E + F E+ +G + ++ +F
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHR-----GFLKECMFFFRELVRMGASLTESSFL 219
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
++K + D +Q+H KK L C+ V SL+ Y G+ R F
Sbjct: 220 GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW 279
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
D+VSW ++I ++ AL L G P++ SV+GV + + G QI
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFAN 467
G +K G I++ N+ I YAK G+++ +RL F I + ++V W+ ++ G+AN
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALL-----SGYAN 394
Query: 468 E----ALRIFELMTVSGIKPNHITLLGVLTAC 495
+ L +F M G +P T L +C
Sbjct: 395 KDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 144/637 (22%), Positives = 262/637 (41%), Gaps = 82/637 (12%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD+ P+R+ +S N+ + F E R G + T +G+L+ C S +
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASL-D 128
Query: 90 LRLGEAIHGSVLVTGM-DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+R G +HG L G+ FV L+ +Y + +E A +F+ +WN +++
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 149 GYVRLGD-GF-REVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
LG GF +E + R G ++ + LK K L+ I K LH A K
Sbjct: 189 ---LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD-ISKQLHCSATKK 244
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
L+ + V +L+ Y K G A +F+ + +N +I + + +
Sbjct: 245 GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN-----PLK 299
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
AL LF M G + ++ T+ S++ + GRQIH + K + +G +L+D
Sbjct: 300 ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALID 359
Query: 327 FYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
FY+ G+++D CF+ ++V W ++++G N LSL Q + G +P E+
Sbjct: 360 FYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYT 418
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS-------------- 432
S+ + C +Q+ ++ G + V +S + YAK+
Sbjct: 419 FSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWAS 474
Query: 433 -----------GDIDSARLTFQE-------IENPDVVSWSEMICCNAHHGFANEALRIFE 474
I S R + E +E PD VSW+ I + + E + +F+
Sbjct: 475 GPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFK 534
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA 534
M S I+P+ T + +L+ CS + G ++ K A+ ++D+ G+
Sbjct: 535 HMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKC 594
Query: 535 GRLEDAKRFILDSGFADDPVMWRALLGACRVH----------KDTMMGKHIADRVIELEP 584
G + + + + + + W AL+ +H K+T+ DRV
Sbjct: 595 GSIRSVMK-VFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV----- 648
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
S++ + G K + + + M+D GV+ E
Sbjct: 649 ----SFISILTACRHGGMVKEGMGLFQKMKDYGVEPE 681
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 166/372 (44%), Gaps = 18/372 (4%)
Query: 197 KMLHVCAIKL--DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
K LH +I L L + V ++ +Y K G ++ A VF+ N +NT+I G+
Sbjct: 32 KALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYS 91
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
+ G +A G+F EM+ G ++ T S ++ +C ++ D RAG Q+H K L
Sbjct: 92 KY-----GDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYGL 144
Query: 315 -QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLR 373
D FVG L+ Y ++ + F P + +W M++ G + + R
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR 204
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARS---GEQIQGWALKFGISNFIIVQNSQICMYA 430
+ + G E SS +GV ++ + +Q+ A K G+ I V NS I Y
Sbjct: 205 ELVRMGASLTE---SSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYG 261
Query: 431 KSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLG 490
K G+ A FQ+ + D+VSW+ +IC A +AL++F M G PN T +
Sbjct: 262 KCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVS 321
Query: 491 VLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFA 550
VL S L+ G + ++ K+ G + ++D + G LED+ R D
Sbjct: 322 VLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRD 379
Query: 551 DDPVMWRALLGA 562
+ V W ALL
Sbjct: 380 KNIVCWNALLSG 391
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 191/661 (28%), Positives = 297/661 (44%), Gaps = 92/661 (13%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSL----INMYSKCKRIEAARVLF 132
F +L C + + R +H VL++ IF SL I++Y++ + AR +F
Sbjct: 59 FDHLLGLCLTAQQCR---QVHAQVLLSDF---IFRSGSLAANLISVYARLGLLLDARNVF 112
Query: 133 DTCDE--LDDVS-WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
+T L D+ WNSI+ V G + EL M + GL Y L L+AC
Sbjct: 113 ETVSLVLLSDLRLWNSILKANVSHGL-YENALELYRGMRQRGLTGDGYILPLILRAC--- 168
Query: 190 KSLNCIG--KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYN 247
+ L G + H I++ L N+ V LL +Y K G + DA +F N +N
Sbjct: 169 RYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWN 228
Query: 248 TMIAGF---------------LQRQTV---------------SCGYAREALGLFCEMQML 277
MI GF +QR+ CG + L F M+M
Sbjct: 229 VMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS 288
Query: 278 GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC--SLVDFYSFFGSID 335
G S + C + ++H + K +E++ +L+ Y G +
Sbjct: 289 GNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGF--EEYLPSRNALIHVYGKQGKVK 346
Query: 336 D-----------GIRCFNS----------------------------TPKLDVVSWTSMI 356
D GI +NS K +VV+WTS+I
Sbjct: 347 DAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVI 406
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
GC G+ + +L RQ S + + ++ +CA++ A G +I G ++ +S
Sbjct: 407 KGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMS 466
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
I+VQN+ + MYAK G + L F+ I + D++SW+ +I HGFA +AL +F+ M
Sbjct: 467 ENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
SG P+ I L+ VL+ACSH GLV++G F M K +G+ +H CIVDLLGR G
Sbjct: 527 ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGF 586
Query: 537 LEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNI 596
L++A + + + ALL +CR+HK+ + + IA ++ LEP SY+LL NI
Sbjct: 587 LKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNI 646
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEM 656
Y+ G+ + + VR L + + +KK G SWIEV K + F + IY LE++
Sbjct: 647 YSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Query: 657 L 657
+
Sbjct: 707 V 707
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 135/312 (43%), Gaps = 47/312 (15%)
Query: 43 DETPQRSIISCNSPAS-----LLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIH 97
DE S++SC+S L F R++G VS A + C L + E +H
Sbjct: 258 DEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVH 317
Query: 98 GSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG--D 155
G V+ G + + N+LI++Y K +++ A LF SWNS+I +V G D
Sbjct: 318 GYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLD 377
Query: 156 GFREVFELLARM-HRSGLDFSDYTLGSALKACCV----DKSLN----------------- 193
+F L M H + + T S +K C V D SL
Sbjct: 378 EALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTI 437
Query: 194 -CI------------GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
CI G+ +H I+ ++ N++V AL++MYAK G L++ LVFE+ R
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD 497
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
+ +N++I G+ G+A +AL +F M G + +++ AC G
Sbjct: 498 KDLISWNSIIKGYGMH-----GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 301 AGRQIHAQICKK 312
GR+I + K+
Sbjct: 553 KGREIFYSMSKR 564
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 176/422 (41%), Gaps = 39/422 (9%)
Query: 303 RQIHAQICKKNLQCDE-FVGCSLVDFYSFFGSIDDGIRCFNSTPKL---DVVSWTSMIAG 358
RQ+HAQ+ + + +L+ Y+ G + D F + + D+ W S++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
V +G +E AL L R G D +I+ ++ C + ++ G+
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE-----ALRIF 473
+ V N + +Y K+G + A F E+ + +SW+ MI GF+ E A++IF
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMI-----KGFSQEYDCESAVKIF 247
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD----YGITANVKHSTCI-V 528
E M KP+ +T VL+ S G ++ L+YF +M+ G V S C +
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL 307
Query: 529 DLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC----RVHKDTMMGKHIADRVIELEP 584
+ L A E +++ GF + AL+ +V + + I ++ IE
Sbjct: 308 EALSIA---EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE--- 361
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG---VKKEPGISWIEV--GSKVHMFLVD 639
S+ L + DAGK AL + +++ K ++W V G V D
Sbjct: 362 ----SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG-RGD 416
Query: 640 DRSHPMSQLIYSRLEEMLVKINKIEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGII 699
D Q+ +S++ V I I +LP G E++G V + SE + V ++
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 700 SL 701
++
Sbjct: 477 NM 478
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
SL FR+ + + + + T +L+ C L LG IHG V+ T M I V N+L+N
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFRE-VFELLARMHRSGLDFSD 176
MY+KC + ++F+ + D +SWNSII GY GF E + RM SG
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGM--HGFAEKALSMFDRMISSGFHPDG 535
Query: 177 YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
L + L AC + ++ + + + L ++D+ + G L +A
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEA 590
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 238/479 (49%), Gaps = 35/479 (7%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K ++ I L+ + + T ++D K + A +F N F+YN++I +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTH- 85
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
++ C R L + L +FTF + K+C ++G G+Q+H +CK +
Sbjct: 86 NSLYCDVIRIYKQLLRKSFELP---DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRF 142
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV--------------------------- 349
+L+D Y F + D + F+ + DV
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 350 ----VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
VSWT+MI+G G + A+ R+ +G +PDE + SV+ CA + + G+
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGF 465
I +A + G V N+ I MY+K G I A F ++E DV+SWS MI A+HG
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
A+ A+ F M + +KPN IT LG+L+ACSH G+ EGLRYF++M++DY I ++H
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 526 CIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPH 585
C++D+L RAG+LE A D +W +LL +CR + + D ++ELEP
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPE 442
Query: 586 AAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHP 644
+YVLL NIY D GK + +RK+++++ +KK PG S IEV + V F+ D S P
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 148/329 (44%), Gaps = 42/329 (12%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
FTF + C S + LG+ +HG + G + N+LI+MY K + A +FD
Sbjct: 110 FTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE 169
Query: 135 CDELDDVSWNSIIAGYVRLGDG------------------------------FREVFELL 164
E D +SWNS+++GY RLG + E +
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 165 ARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK 224
M +G++ + +L S L +C SL +GK +H+ A + V AL++MY+K
Sbjct: 230 REMQLAGIEPDEISLISVLPSCAQLGSLE-LGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 225 TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKF 284
G ++ A+ +F + ++TMI+G+ G A A+ F EMQ + +
Sbjct: 289 CGVISQAIQLFGQMEGKDVISWSTMISGYAYH-----GNAHGAIETFNEMQRAKVKPNGI 343
Query: 285 TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSLVDFYSFFGSIDDGIRCF 341
TF ++ AC +G ++ G + + + +++ Q + E GC L+D + G ++ +
Sbjct: 344 TFLGLLSACSHVGMWQEGLR-YFDMMRQDYQIEPKIEHYGC-LIDVLARAGKLERAVEIT 401
Query: 342 NSTP-KLDVVSWTSMIAGCVENGKFETAL 369
+ P K D W S+++ C G + AL
Sbjct: 402 KTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 146/337 (43%), Gaps = 29/337 (8%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ I+ S+++ G+ F++ +++ K + ++ A LF+ + +NSII Y
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTH- 85
Query: 154 GDGFREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNM 212
+ +V + ++ R + D +T K+C S +GK +H K ++
Sbjct: 86 NSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC-YLGKQVHGHLCKFGPRFHV 144
Query: 213 VVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF----------------LQR 256
V AL+DMY K L DA VF+ + +N++++G+ L +
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 257 QTVS-----CGYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
VS GY EA+ F EMQ+ G+ + + S++ +C +G G+ IH
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFE 366
++ V +L++ YS G I I+ F DV+SW++MI+G +G
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 367 TALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
A+ + + KP+ ++ C+ + + G
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
FRE ++AG+ + + VL C +L LG+ IH G V N+LI MYSK
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
C I A LF + D +SW+++I+GY G+ + E M R+ + + T
Sbjct: 289 CGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI-ETFNEMQRAKVKPNGITFLG 347
Query: 182 ALKAC 186
L AC
Sbjct: 348 LLSAC 352
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 265/544 (48%), Gaps = 12/544 (2%)
Query: 84 CGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSW 143
C + L+ G +HG + G+ FV +S+ + YSK A + F + D SW
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299
Query: 144 NSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA 203
SIIA R GD E F++ M G+ D + S L L GK H
Sbjct: 300 TSIIASLARSGD-MEESFDMFWEMQNKGMH-PDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH-NDFMYNTMIAGFLQRQT-VSC 261
I+ + + V +LL MY K L+ A +F N +NTM+ G+ + + V C
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
+ LF ++Q LG+ + +S++ +C IG G+ +H + K +L V
Sbjct: 418 ------IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV 471
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
SL+D Y G + R F +V++W +MIA V + E A++L + ++ K
Sbjct: 472 NSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFK 530
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
P + +++ C + + G+ I + + + + + I MYAK G ++ +R
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 442 FQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLV 501
F D V W+ MI HG A+ +F+ M S +KP T L +L+AC+H GLV
Sbjct: 591 FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLV 650
Query: 502 DEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
++G + F M + Y + N+KH +C+VDLL R+G LE+A+ ++ F+ D V+W LL
Sbjct: 651 EQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 562 ACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
+C H + MG +A+R + +P Y++L N+Y+ AGK + A R++M++ GV K
Sbjct: 710 SCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKR 769
Query: 622 PGIS 625
G S
Sbjct: 770 AGHS 773
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 230/531 (43%), Gaps = 24/531 (4%)
Query: 97 HGSVLVTG-MDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD 155
H ++++TG + IFV + LI+ Y+ + + +F D WNSII + GD
Sbjct: 46 HNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGD 105
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD-LNSNMVV 214
R + + M SG +T + AC + +G +H +K + N V
Sbjct: 106 YARSLCFFFS-MLLSGQSPDHFTAPMVVSACAELLWFH-VGTFVHGLVLKHGGFDRNTAV 163
Query: 215 GTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM 274
G + + Y+K G L DA LVF+ + + +I+G +Q G + LG C+M
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQN-----GESEGGLGYLCKM 218
Query: 275 QMLGLNCSK---FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
G + K T +AC +G + GR +H K L +FV S+ FYS
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G+ + F D+ SWTS+IA +G E + + + G PD ++S ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI-ENPDV 450
M G+ G+ ++ S V NS + MY K + A F I E +
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG--LVDEGLRYF 508
+W+ M+ + + +F + GI+ + + V+++CSH G L+ + L +
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH-K 567
++K +T +V +S ++DL G+ G L A R ++ + + W A++ A VH +
Sbjct: 459 -VVKTSLDLTISVVNS--LIDLYGKMGDLTVAWRMFCEAD--TNVITWNAMI-ASYVHCE 512
Query: 568 DTMMGKHIADRVI--ELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQ 616
+ + DR++ +P + LL N E+ + R + + +
Sbjct: 513 QSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETE 563
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 161/325 (49%), Gaps = 9/325 (2%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
FR+ + G+ + + V++ C + LG+++H V+ T +D I V+NSLI++Y K
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS 181
+ A +F D + ++WN++IA YV + + L RM S TL +
Sbjct: 481 MGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAI-ALFDRMVSENFKPSSITLVT 538
Query: 182 ALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH 241
L AC SL G+M+H + + N+ + AL+DMYAK G L + +F++
Sbjct: 539 LLMACVNTGSLE-RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
+ +N MI+G+ G A+ LF +M+ + + TF +++ AC G
Sbjct: 598 DAVCWNVMISGYGMH-----GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCV 360
G+++ ++ + +++ + LVD S G++++ S P D V W ++++ C+
Sbjct: 653 GKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 361 ENGKFETALSLLRQFMASGRKPDEF 385
+G+FE + + + +AS + D +
Sbjct: 713 THGEFEMGIRMAERAVASDPQNDGY 737
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
R+ +A I L + FV L+ Y+ +G + R F+ + D+ W S+I N
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF-GISNFIIV 421
G + +L + SG+ PD F V+ CA++ G + G LK G V
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
S + Y+K G + A L F E+ + DVV+W+ +I + +G + L M +G
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 482 ---KPNHITLLGVLTACSHGGLVDEG 504
KPN TL ACS+ G + EG
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEG 249
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 49 SIISCNSPASLLAFREARIA-GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDG 107
S + C +A + ++ S T +L C +T +L G+ IH + T +
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM 566
Query: 108 MIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM 167
+ + +LI+MY+KC +E +R LFD ++ D V WN +I+GY GD L +M
Sbjct: 567 NLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD-VESAIALFDQM 625
Query: 168 HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
S + + T + L A C L GK L + + D+ N+ + L+D+ +++G
Sbjct: 626 EESDVKPTGPTFLALLSA-CTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGN 684
Query: 228 LTDAVLVFESFRYHND-FMYNTMIA 251
L +A S + D ++ T+++
Sbjct: 685 LEEAESTVMSMPFSPDGVIWGTLLS 709
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 241/444 (54%), Gaps = 15/444 (3%)
Query: 179 LGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFE-- 236
S L+ C ++++ ++ H+ L L +N+ + + L+ +YA G A VF+
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYL-LRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
S R + F +N++I+G+ + G +A+ L+ +M G+ +FTF ++KAC I
Sbjct: 154 SKRDSSPFAWNSLISGYAE-----LGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
G + G IH + K+ D +V +LV Y+ G I F+ P D VSW SM+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
G + +G AL + R + +G +PD+ +SSV+ A + + + G Q+ GW ++ G+
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME 325
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
+ V N+ I +Y+K G + A F ++ D VSW+ +I H + L+ FE M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQM 382
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
+ KP+ IT + VL+ C++ G+V++G R F +M K+YGI ++H C+V+L GRAG
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGM 442
Query: 537 LEDAKRFILDS-GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYN 595
+E+A I+ G P +W ALL AC +H +T +G+ A R+ ELEP ++ LL
Sbjct: 443 MEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIR 502
Query: 596 IYNDAGKEKRALEVRKLMQDQGVK 619
IY+ A + + VR++M D+G++
Sbjct: 503 IYSKAKRAEDVERVRQMMVDRGLE 526
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 208/468 (44%), Gaps = 39/468 (8%)
Query: 23 TLPFSNPVHSP--IRTRTLHLFDETPQRSIIS--CNSPASLLAFREARIAGLPVSDFTFA 78
+L F+ P +P I +++H S+I+ S ++ E I FA
Sbjct: 46 SLSFTKPSPTPLLIEKQSIHRTQLEALDSVITDLETSAQKGISLTEPEI---------FA 96
Query: 79 GVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL 138
+L C S R + G +H + + + + + L+ +Y+ C E A +FD +
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 139 DD--VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
D +WNS+I+GY LG + + L +M G+ +T LKAC S+ IG
Sbjct: 157 DSSPFAWNSLISGYAELGQ-YEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ-IG 214
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ +H +K ++ V AL+ MYAK G + A VF+ + + +N+M+ G+L
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G EAL +F M G+ K SS++ ++ F+ GRQ+H + ++ ++
Sbjct: 275 -----GLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEW 326
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
+ V +L+ YS G + F+ + D VSW ++I+ +N L Q
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMH 383
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK-FGISNFIIVQNSQICMYAKSGDI 435
+ KPD SV+ +CA+ GE++ K +GI + + +Y ++G +
Sbjct: 384 RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 436 DSA-RLTFQEI---ENPDVVSWSEMICCNAHHGFAN----EALRIFEL 475
+ A + QE+ P V W ++ HG + A R+FEL
Sbjct: 444 EEAYSMIVQEMGLEAGPTV--WGALLYACYLHGNTDIGEVAAQRLFEL 489
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (618), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 277/576 (48%), Gaps = 15/576 (2%)
Query: 60 LAFREARIAGLPVSDFT--FAGVLAYCGSTRN-LRLGEAIHGSVLVTGMDGMIFVMNSLI 116
L + +I L + FT V+ C + LG +H L G D V NSLI
Sbjct: 30 LRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLI 89
Query: 117 NMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGF-REVFELLARMHRSGLDFS 175
+MY+K R A R +FD D VS+ SII + DG E +L+ M+ G
Sbjct: 90 SMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ--DGLLYEAMKLIKEMYFYGFIPK 147
Query: 176 DYTLGSALKACCVDKSLNCIGKMLH-VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
+ S L C S + + +M H + + + ++++ TAL+DMY K A V
Sbjct: 148 SELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHV 207
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
F+ N+ + MI+G + Q G + LF MQ L ++ T S++ ACV
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMG-----VDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 295 AIGDFRA-GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
+ + ++IH + DE + + + Y G++ F ++ DVV W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
SMI+G E G ++LL Q G + + + +++ C + + LK
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
G + I++ N+ I MYAK G + +AR F E+ D+VSWS MI HG +EAL IF
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 474 ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
+ M G + + + L +L+AC+H GLV+E F K Y + ++H C ++LLGR
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGR 501
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGACRVH-KDTMMGKHIADRVIELEPHAAASYVL 592
G+++DA ++ +W +LL AC H + + GK IA+ +++ EP A+YVL
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVL 561
Query: 593 LYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
L I+ ++G A EVR++MQ + + K G S IE
Sbjct: 562 LSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 53 CNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVM 112
C+ +LL + R G+ + T +++ C ++ L +H +L G I +
Sbjct: 334 CSEVMNLL--NQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLG 391
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGL 172
N+LI+MY+KC + AAR +F E D VSW+S+I Y G G E E+ M + G
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG-SEALEIFKGMIKGGH 450
Query: 173 DFSDYTLGSALKAC 186
+ D + L AC
Sbjct: 451 EVDDMAFLAILSAC 464
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 220/407 (54%), Gaps = 10/407 (2%)
Query: 254 LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN 313
L R S E++ ++ EM+ G+ +K TF ++KAC + AGRQI ++ K
Sbjct: 84 LSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHG 143
Query: 314 LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLR 373
D +VG +L+ Y D + F+ + +VVSW S++ VENGK
Sbjct: 144 FDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFC 203
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
+ + PDE M ++ C + G+ + + + + + + MYAKSG
Sbjct: 204 EMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSG 261
Query: 434 DIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVL 492
++ ARL F+ + + +V +WS MI A +GFA EAL++F ++M S ++PN++T LGVL
Sbjct: 262 GLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
Query: 493 TACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADD 552
ACSH GLVD+G +YF M+K + I + H +VD+LGRAGRL +A FI F D
Sbjct: 322 CACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPD 381
Query: 553 PVMWRALLGACRVHK---DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEV 609
V+WR LL AC +H D +G+ + R+IELEP + + V++ N + +A A EV
Sbjct: 382 AVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEV 441
Query: 610 RKLMQDQGVKKEPGISWIEVGSKVHMFL--VDDRSHPMSQLIYSRLE 654
R++M++ +KK G S +E+G H F D RS +S IY L+
Sbjct: 442 RRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVS--IYELLD 486
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 171/367 (46%), Gaps = 20/367 (5%)
Query: 3 LNLIRSQPNPFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQ------RSIISCNSP 56
++L Q + FI S+ + +L + + + RT LH D TP R S +SP
Sbjct: 36 IHLSSLQNDSFIISELVRVSSLSLAKDL-AFARTLLLHSSDSTPSTWNMLSRGYSSSDSP 94
Query: 57 A-SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSL 115
S+ + E + G+ + TF +L C S L G I VL G D ++V N+L
Sbjct: 95 VESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNL 154
Query: 116 INMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
I++Y CK+ AR +FD E + VSWNSI+ V G VFE M
Sbjct: 155 IHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK-LNLVFECFCEMIGKRFCPD 213
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
+ T+ L AC + SL GK++H + +L N +GTAL+DMYAK+G L A LVF
Sbjct: 214 ETTMVVLLSACGGNLSL---GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVF 270
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE-MQMLGLNCSKFTFSSIVKACV 294
E N + ++ MI G Q G+A EAL LF + M+ + + TF ++ AC
Sbjct: 271 ERMVDKNVWTWSAMIVGLAQY-----GFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 295 AIGDFRAGRQIHAQICK-KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSW 352
G G + ++ K ++ ++VD G +++ P + D V W
Sbjct: 326 HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVW 385
Query: 353 TSMIAGC 359
++++ C
Sbjct: 386 RTLLSAC 392
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 14/263 (5%)
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG------IRCFNSTPKLDVVSWTSMIA 357
QIH QI +LQ D F+ LV S + D + +STP +W +
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPS----TWNMLSR 86
Query: 358 GCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISN 417
G + ++ + + G KP++ ++ CA +G QIQ LK G
Sbjct: 87 GYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF 146
Query: 418 FIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT 477
+ V N+ I +Y AR F E+ +VVSW+ ++ +G N F M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
P+ T++ +L+AC G L L + ++M ++ + N + T +VD+ ++G L
Sbjct: 207 GKRFCPDETTMVVLLSACG-GNLSLGKLVHSQVMVRE--LELNCRLGTALVDMYAKSGGL 263
Query: 538 EDAKRFILDSGFADDPVMWRALL 560
E A R + + + W A++
Sbjct: 264 EYA-RLVFERMVDKNVWTWSAMI 285
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/539 (28%), Positives = 273/539 (50%), Gaps = 42/539 (7%)
Query: 93 GEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVR 152
G +H ++ +G+ + + L+ Y +C ++ AR +FD + D+S ++ G
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPK-RDISGCVVMIGACA 93
Query: 153 LGDGFREVFELLARMHRSGLDFSDYTLGSALKAC--CVDKSLNCIGKMLHVCAIKLDLNS 210
++E + M++ GL + + S LKA +D+ GKM+H +K S
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREF---GKMIHCLVLKFSYES 150
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
+ + ++L+DMY+K G + +A VF + ++N MI+G+ A EAL L
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ-----ADEALNL 205
Query: 271 FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
+M++LG+ T+++++ + + +I +C +D Y
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC--------------LDGY-- 249
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
K DVVSWTS+I+G V N + E A +Q + G P+ + ++
Sbjct: 250 ---------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
+ C +A + G++I G+++ G+ + V+++ + MY K G I A + F++
Sbjct: 295 LPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTT 354
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEI 510
V+++ MI C A+HG A++A+ +F+ M +G K +H+T +LTACSH GL D G F +
Sbjct: 355 VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLL 414
Query: 511 MKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTM 570
M+ Y I ++H C+VDLLGRAG+L +A I D +W ALL ACR H +
Sbjct: 415 MQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNME 474
Query: 571 MGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
+ + A + ELEP + + +LL ++Y +AG + + ++K+++ + ++ G SW+E
Sbjct: 475 LARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG 358
F GR +HA + + + LV FY G + D + F+ PK D+ MI
Sbjct: 32 FCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
C NG ++ +L R+ G K D FI+ S++ ++ G+ I LKF +
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
+ +S I MY+K G++ +AR F ++ D+V ++ MI A++ A+EAL + + M +
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 479 SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLE 538
GIKP+ IT +++ SH ++ E+M D G +V T I+ L + E
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNE 270
Query: 539 ---DAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADR--VIELEPHAAASYVLL 593
DA + +L G + LL AC GK I V LE H LL
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 594 YNIYNDAG 601
++Y G
Sbjct: 331 -DMYGKCG 337
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 157/361 (43%), Gaps = 61/361 (16%)
Query: 192 LNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIA 251
L C G++LH + + + L+ Y + G + DA VF+ D ++
Sbjct: 31 LFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP-KRDISGCVVMI 89
Query: 252 GFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICK 311
G R GY +E+L F EM GL F S++KA + D G+ IH + K
Sbjct: 90 GACARN----GYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK 145
Query: 312 KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSL 371
+ + D F+ SL+D YS FG + + + F+ + D+V + +MI+G N + + AL+L
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNL 205
Query: 372 LRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAK 431
++ G KPD +++ IS F ++N + K
Sbjct: 206 VKDMKLLGIKPDVITWNAL------------------------ISGFSHMRNEE-----K 236
Query: 432 SGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE-ALRIFELMTVSGIKPNHITLLG 490
+I L + PDVVSW+ +I H+ F NE A F+ M G+ PN T++
Sbjct: 237 VSEI--LELMCLDGYKPDVVSWTSIISGLVHN-FQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 491 VLTACS-----------HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
+L AC+ HG V GL +D+G + ++D+ G+ G + +
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGL-------EDHGFV-----RSALLDMYGKCGFISE 341
Query: 540 A 540
A
Sbjct: 342 A 342
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 176/452 (38%), Gaps = 81/452 (17%)
Query: 41 LFDETPQRSIISC-----------NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P+R I C SL FRE GL + F +L + +
Sbjct: 73 VFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLD 132
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
G+ IH VL + F+++SLI+MYSK + AR +F E D V +N++I+G
Sbjct: 133 REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISG 192
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
Y D++LN + M + IK D+
Sbjct: 193 YANNSQA--------------------------------DEALNLVKDM-KLLGIKPDV- 218
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESF---RYHNDFM-YNTMIAGFLQRQTVSCGYAR 265
+ AL+ ++ + E Y D + + ++I+G +
Sbjct: 219 ---ITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ-----NE 270
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
+A F +M GL + T +++ AC + + G++IH L+ FV +L+
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 326 DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEF 385
D Y G I + + F TPK V++ SMI +G + A+ L Q A+G K D
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHL 390
Query: 386 IMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNS------------QICMYAKSG 433
++++ C+ G+ + F+++QN + + ++G
Sbjct: 391 TFTAILTACSHAGLTDLGQNL-----------FLLMQNKYRIVPRLEHYACMVDLLGRAG 439
Query: 434 DIDSARLTFQEIE-NPDVVSWSEMICCNAHHG 464
+ A + + PD+ W ++ +HG
Sbjct: 440 KLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 21/295 (7%)
Query: 85 GSTRNLRLGEAIH--GSVLVTGMDGMIFVMNSLINMYSKCKRIE-AARVLFDTC---DEL 138
G N + EA++ + + G+ + N+LI+ +S + E + +L C +
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKP 251
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
D VSW SII+G V + F+ +M GL + T+ + L AC + GK
Sbjct: 252 DVVSWTSIISGLVHNFQN-EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKH-GKE 309
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
+H ++ L + V +ALLDMY K G +++A+++F +N+MI +
Sbjct: 310 IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANH-- 367
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD- 317
G A +A+ LF +M+ G TF++I+ AC G G+ + + K
Sbjct: 368 ---GLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPR 424
Query: 318 -EFVGCSLVDFYSFFGSIDDG---IRCFNSTPKLDVVSWTSMIAGCVENGKFETA 368
E C +VD G + + I+ P D+ W +++A C +G E A
Sbjct: 425 LEHYAC-MVDLLGRAGKLVEAYEMIKAMRMEP--DLFVWGALLAACRNHGNMELA 476
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 244/490 (49%), Gaps = 23/490 (4%)
Query: 143 WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHV 201
WN +I GY F E +L RM R+GL D YT +K C + + +G +H
Sbjct: 77 WNHLIKGYSN-KFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR-VGSSVHG 134
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSC 261
+++ + ++VVGT+ +D Y K L A VF N + ++ + V
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAY-----VKS 189
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G EA +F M L +++++V V GD +++ ++ K+++
Sbjct: 190 GELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDI----ISY 241
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
S++D Y+ G + F +DV +W+++I G +NG+ A + + A K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWAL----KFGISNFIIVQNSQICMYAKSGDIDS 437
PDEFIM +M C+ M E++ + KF S++++ + I M AK G +D
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-SHYVV--PALIDMNAKCGHMDR 358
Query: 438 ARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSH 497
A F+E+ D+VS+ M+ A HG +EA+R+FE M GI P+ + +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Query: 498 GGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWR 557
LV+EGLRYFE+M+K Y I A+ H +CIV+LL R G+L++A I F W
Sbjct: 419 SRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWG 478
Query: 558 ALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG 617
+LLG C +H +T + + +A + ELEP +A SYVLL NIY + +R M + G
Sbjct: 479 SLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENG 538
Query: 618 VKKEPGISWI 627
+ K G SWI
Sbjct: 539 ITKICGRSWI 548
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 74 DFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD 133
++TF V+ C + +R+G ++HG VL G D + V S ++ Y KCK + +AR +F
Sbjct: 110 EYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFG 169
Query: 134 TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN 193
E + VSW +++ YV+ G+ E + M L + + +K+ + +
Sbjct: 170 EMPERNAVSWTALVVAYVKSGE-LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKK 228
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
+M +++ T+++D YAK G + A +FE R + ++ +I G+
Sbjct: 229 LFDEM---------PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGY 279
Query: 254 LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK- 312
Q G EA +F EM + +F ++ AC +G F ++ + + ++
Sbjct: 280 AQN-----GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRM 334
Query: 313 NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
N +V +L+D + G +D + F P+ D+VS+ SM+ G +G A+ L
Sbjct: 335 NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLF 394
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
+ + G PDE + ++ VC G
Sbjct: 395 EKMVDEGIVPDEVAFTVILKVCGQSRLVEEG 425
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/630 (26%), Positives = 296/630 (46%), Gaps = 83/630 (13%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLF--DTCDELDDVSWNSIIAGYVRLGDGFREVFELLAR 166
++ N++I Y K ++ AR LF D C E D +++N++++G+ + E E+
Sbjct: 54 VYSWNAVIAAYVKFNNVKEARELFESDNC-ERDLITYNTLLSGFAKTDGCESEAIEMFGE 112
Query: 167 MHRSGLD---FSDYTLGSALKACCVDKSLNCI-GKMLHVCAIKLDLNSNMVVGTALLDMY 222
MHR D D+T+ + +K K N G+ LH +K + ++L+ MY
Sbjct: 113 MHRKEKDDIWIDDFTVTTMVKLSA--KLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMY 170
Query: 223 AKTGCLTD---------------------------------AVLVFESFRYHNDFM-YNT 248
+K G + A+ VF ND + +NT
Sbjct: 171 SKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNT 230
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
+IAG+ Q GY EAL + M+ GL + +F +++ ++ + G+++HA+
Sbjct: 231 LIAGYAQN-----GYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHAR 285
Query: 309 ICKKNLQCDEFVGCSLVDFY-------------------------------SFFGSIDDG 337
+ K ++FV +VD Y S G + +
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 338 IRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS-GRKPDEFIMSSVMGVCAD 396
R F+S + ++V WT+M G + + ++ L L R F+A+ PD +M SV+G C+
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSL 405
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEM 456
A G++I G +L+ GI + + + MY+K G+++ A F D V ++ M
Sbjct: 406 QAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAM 465
Query: 457 ICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYG 516
I AHHG ++ + FE MT G KP+ IT + +L+AC H GLV EG +YF+ M + Y
Sbjct: 466 IAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYN 525
Query: 517 ITANVKHSTCIVDLLGRAGRLEDAKRFI--LDSGFADDPVMWRALLGACRVHKDTMMGKH 574
I+ H TC++DL G+A RL+ A + +D D V+ A L AC +K+T + K
Sbjct: 526 ISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQ-VEKDAVILGAFLNACSWNKNTELVKE 584
Query: 575 IADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVH 634
+ ++++ +E + Y+ + N Y +G+ +R M+ + ++ G SW + + H
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFH 644
Query: 635 MFLVDDRSHPMSQLIYSRLEEMLVKINKIE 664
MF D SH ++ IY+ L + +++I+
Sbjct: 645 MFTSSDISHYETEAIYAMLHFVTKDLSEID 674
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 65/396 (16%)
Query: 72 VSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR------- 124
+ DFT ++ N+ GE +HG ++ TG DG F ++SLI+MYSKC +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 125 --------------------------IEAARVLFDTCDELDD-VSWNSIIAGYVRLGDGF 157
I+ A +F EL+D +SWN++IAGY + +G+
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ--NGY 240
Query: 158 -REVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGT 216
E ++ M +GL + +++ G+ L KSL IGK +H +K SN V +
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLK-IGKEVHARVLKNGSYSNKFVSS 299
Query: 217 ALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF------LQRQTVSCGYAREALGL 270
++D+Y K G + A + + N + ++MI G+ ++ + + + + L +
Sbjct: 300 GIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV 359
Query: 271 FCEMQMLGLNCSK---------------------FTFSSIVKACVAIGDFRAGRQIHAQI 309
+ M + LN + S++ AC G++IH
Sbjct: 360 WTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHS 419
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETAL 369
+ + D+ + + VD YS G+++ R F+S+ + D V + +MIAGC +G +
Sbjct: 420 LRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSF 479
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
G KPDE +++ C GE+
Sbjct: 480 QHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEK 515
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 44/334 (13%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKC------ 122
GL + +F VL S ++L++G+ +H VL G FV + ++++Y KC
Sbjct: 255 GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYA 314
Query: 123 --------------------------KRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDG 156
K +EA R LFD+ E + V W ++ GY+ L
Sbjct: 315 ESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKR-LFDSLSEKNLVVWTAMFLGYLNLRQP 373
Query: 157 FREVFELLARMHRSGLDFSD-YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVG 215
V EL + + D + S L AC + + GK +H +++ + + +
Sbjct: 374 -DSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEP-GKEIHGHSLRTGILMDKKLV 431
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ 275
TA +DMY+K G + A +F+S + MYN MIAG G+ ++ F +M
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHH-----GHEAKSFQHFEDMT 486
Query: 276 MLGLNCSKFTFSSIVKACVAIGDFRAGRQ-IHAQICKKNLQCDEFVGCSLVDFYSFFGSI 334
G + TF +++ AC G G + + I N+ + ++D Y +
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 335 DDGIRCFNSTPKL--DVVSWTSMIAGCVENGKFE 366
D I ++ D V + + C N E
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 172/590 (29%), Positives = 299/590 (50%), Gaps = 22/590 (3%)
Query: 59 LLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRL-GEAIHGSVLVTGMDGMIFVMNSLIN 117
L F + R+ G + T V+ C R+L GE IHG V+ +G G+ V NS++
Sbjct: 112 LWWFSKLRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILC 168
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
MY+ + +AR LFD E D +SW+ +I YV+ + + +H + +
Sbjct: 169 MYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCV 227
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLN-SNMVVGTALLDMYAKTGCLTDAVLVFE 236
T+ S LKAC V + ++ +G+ +H +I+ + +++ V +L+DMY+K + A VF+
Sbjct: 228 TVTSVLKACTVMEDID-VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFD 286
Query: 237 SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
N +N+++AGF+ Q EAL +F M + + T S+++ C
Sbjct: 287 ETTCRNIVSWNSILAGFVHNQRYD-----EALEMFHLMVQEAVEVDEVTVVSLLRVCKFF 341
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
+ IH I ++ + +E SL+D Y+ +DD +S DVVS ++MI
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
+G G+ + A+S+ F P+ + S++ C+ A R+ + G A++ ++
Sbjct: 402 SGLAHAGRSDEAISI---FCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA 458
Query: 417 -NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
N I V S + YAK G I+ AR TF +I +++SW+ +I A +G ++AL +F+
Sbjct: 459 INDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDE 518
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM-KKDYGITANVKHSTCIVDLLGRA 534
M G PN +T L L+AC+HGGLV +GL F+ M ++D+ +++H +CIVD+L RA
Sbjct: 519 MKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRA 576
Query: 535 GRLEDAKRFI--LDSGFADDPVMWRALLGACRVH-KDTMMGKHIADRVIELEPHAAASYV 591
G ++ A I L W A+L CR K ++ + V+ELEP ++ Y+
Sbjct: 577 GEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYL 636
Query: 592 LLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDR 641
L + + + +R+L++++ V+ G S + G+ FL D+
Sbjct: 637 LASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 230/517 (44%), Gaps = 23/517 (4%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREV-FELLARM 167
+F NS+ + Y KC + + FD + D VSWN I+ G L GF E +++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGL--LDYGFEEEGLWWFSKL 118
Query: 168 HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
G + + TL + AC +SL G+ +H I+ V ++L MYA +
Sbjct: 119 RVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDS 175
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM-QMLGLNCSKFTF 286
L+ A +F+ + ++ +I ++Q + G L LF EM T
Sbjct: 176 LS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVG-----LKLFKEMVHEAKTEPDCVTV 229
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKKNLQ-CDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
+S++KAC + D GR +H ++ D FV SL+D YS +D R F+ T
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
++VSW S++AG V N +++ AL + + + DE + S++ VC +
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGF 465
I G ++ G + + +S I Y +D A + DVVS S MI AH G
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACS-HGGLVDEGLRYFEIMKKDYGITANVKHS 524
++EA+ IF M + PN IT++ +L ACS L + +++ I ++
Sbjct: 410 SDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVG 465
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE--L 582
T IVD + G +E A+R D + + W ++ A ++ + D + +
Sbjct: 466 TSIVDAYAKCGAIEMARR-TFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 583 EPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
P+ A +Y+ + N G K+ L + K M ++ K
Sbjct: 525 TPN-AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 29/311 (9%)
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSK-FTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
+Q G RE + + E+Q G+ + F F + KAC +
Sbjct: 17 KQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL--------------- 61
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ 374
F G S+ DFY G + G+R F+ D VSW ++ G ++ G E L +
Sbjct: 62 ----FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
G +P+ + V+ C + GE+I G+ ++ G VQNS +CMYA S
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDS 175
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLT 493
+ SAR F E+ DV+SWS +I L++F E++ + +P+ +T+ VL
Sbjct: 176 L-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLK 234
Query: 494 ACSHGGLVDEG--LRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFAD 551
AC+ +D G + F I ++ + + A+V ++D+ + ++ A R + D
Sbjct: 235 ACTVMEDIDVGRSVHGFSI-RRGFDL-ADVFVCNSLIDMYSKGFDVDSAFR-VFDETTCR 291
Query: 552 DPVMWRALLGA 562
+ V W ++L
Sbjct: 292 NIVSWNSILAG 302
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 25/337 (7%)
Query: 38 TLHLFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGS 86
+FDET R+I+S NS +L F + V + T +L C
Sbjct: 281 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 87 TRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
++IHG ++ G + ++SLI+ Y+ C ++ A + D+ D VS +++
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
I+G G E + M + + T+ S L AC V L K H AI+
Sbjct: 401 ISGLAHAGRS-DEAISIFCHMRDTP---NAITVISLLNACSVSADLR-TSKWAHGIAIRR 455
Query: 207 DLNSNMV-VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
L N + VGT+++D YAK G + A F+ N + +I+ + G
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN-----GLPD 510
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
+AL LF EM+ G + T+ + + AC G + G I + +++ + +V
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIV 570
Query: 326 DFYSFFGSIDDGIRCFNSTP---KLDVVSWTSMIAGC 359
D S G ID + + P K +W ++++GC
Sbjct: 571 DMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/588 (27%), Positives = 281/588 (47%), Gaps = 48/588 (8%)
Query: 40 HLFDETPQRSIISCNSPASLLA-----------FREARIAGLPVSDFTFAGVLAYCGSTR 88
LF+E P+R S N+ + A FR G+ ++ +FAGVL CG
Sbjct: 117 ELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLIL 176
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
+LRL +H +V+ G G + + S++++Y KC+ + AR +FD DVSWN I+
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR 236
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
Y+ +G E + +M + ++T+ S + AC +L +GK++H A+KL +
Sbjct: 237 RYLEMGFN-DEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALE-VGKVIHAIAVKLSV 294
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL-------------- 254
++ VV T++ DMY K L A VF+ R + + + ++G+
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL 354
Query: 255 --QRQTVSC-----GYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
+R VS GY EAL M+ N T I+ C I D + G
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL-DVVSWTSMIAGCVE 361
+Q H I + + V +L+D Y G++ F +L D VSW +++ G
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
G+ E ALS + M KP ++ +++++ CA++ A G+ I G+ ++ G +++
Sbjct: 475 VGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVI 533
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMI--CCNAHHGFANEALRIFELMTVS 479
+ + + MY+K D A F+E D++ W+ +I CC +G + E +F L+
Sbjct: 534 RGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCC--RNGRSKEVFELFMLLENE 591
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
G+KP+H+T LG+L AC G V+ G +YF M Y I+ V+H C+++L + G L
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE---LEP 584
+ F+L F M + AC+ ++ + +G A R++ L+P
Sbjct: 652 LEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 237/527 (44%), Gaps = 43/527 (8%)
Query: 71 PVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARV 130
PVS + + + C S + + ++ IF++N I Y KC ++ AR
Sbjct: 58 PVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARE 117
Query: 131 LFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
LF+ E D SWN++I + G EVF + RM+R G+ ++ + LK+C +
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNGVS-DEVFRMFRRMNRDGVRATETSFAGVLKSCGLIL 176
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMI 250
L + + LH +K + N+ + T+++D+Y K ++DA VF+ +D +N ++
Sbjct: 177 DLRLL-RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 251 AGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQIC 310
R+ + G+ EA+ +F +M L + T SS++ AC G+ IHA
Sbjct: 236 -----RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAV 290
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST-------------------------- 344
K ++ D V S+ D Y ++ R F+ T
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARE 350
Query: 345 -----PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAA 399
P+ ++VSW +M+ G V +++ AL L D + ++ VC+ ++
Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISD 410
Query: 400 ARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI-ENPDVVSWSEMIC 458
+ G+Q G+ + G +IV N+ + MY K G + SA + F+++ E D VSW+ ++
Sbjct: 411 VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGIT 518
A G + +AL FE M V KP+ TL +L C++ ++ G + +D G
Sbjct: 471 GVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYK 528
Query: 519 ANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL-GACR 564
+V +VD+ + R D + D ++W +++ G CR
Sbjct: 529 IDVVIRGAMVDMYSKC-RCFDYAIEVFKEAATRDLILWNSIIRGCCR 574
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 24/304 (7%)
Query: 23 TLPFSNPVHSPIRTRTLHLFDETPQRSIISCNS-------------PASLLAFREARIAG 69
T S S + LFD P+R+I+S N+ L I
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
+ + T +L C ++++G+ HG + G D + V N+L++MY KC +++A
Sbjct: 393 --IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN 450
Query: 130 VLFDTCDEL-DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCV 188
+ F EL D+VSWN+++ G R+G + M S YTL + L C
Sbjct: 451 IWFRQMSELRDEVSWNALLTGVARVGRS-EQALSFFEGMQVEAKP-SKYTLATLLAGCAN 508
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
+LN +GK +H I+ ++V+ A++DMY+K C A+ VF+ + ++N+
Sbjct: 509 IPALN-LGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNS 567
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
+I G + G ++E LF ++ G+ TF I++AC+ G G Q +
Sbjct: 568 IIRGCCRN-----GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSS 622
Query: 309 ICKK 312
+ K
Sbjct: 623 MSTK 626
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 157/367 (42%), Gaps = 16/367 (4%)
Query: 282 SKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
S + + + ++C + R++ + + + F+ ++ Y G +DD F
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELF 119
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
P+ D SW ++I C +NG + + R+ G + E + V+ C + R
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR 179
Query: 402 SGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNA 461
Q+ +K+G S + ++ S + +Y K + AR F EI NP VSW+ ++
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 462 HHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
GF +EA+ +F M ++P + T+ V+ ACS ++ G I K + A+
Sbjct: 240 EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK-LSVVADT 298
Query: 522 KHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE 581
ST + D+ + RLE A+R + D + D W + + + T + + D + E
Sbjct: 299 VVSTSVFDMYVKCDRLESARR-VFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 582 LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE-----------PGISWIEVG 630
S+ + Y A + AL+ LM+ + + GIS +++G
Sbjct: 358 ---RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 631 SKVHMFL 637
+ H F+
Sbjct: 415 KQAHGFI 421
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 10/223 (4%)
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
R + KL V T I +E G A+S+L AS ++ + C+ A
Sbjct: 22 RVIGTGTKLTV---TRQILEHLEGGNVSKAVSVL---FASPEPVSYWLYERLFRSCSSKA 75
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
++Q + F I + N I Y K G +D AR F+E+ D SW+ +I
Sbjct: 76 LVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVIT 135
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVD-EGLRYFEIMKKDYGI 517
A +G ++E R+F M G++ + GVL +C G ++D LR YG
Sbjct: 136 ACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC--GLILDLRLLRQLHCAVVKYGY 193
Query: 518 TANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
+ NV T IVD+ G+ + DA+R + D V W ++
Sbjct: 194 SGNVDLETSIVDVYGKCRVMSDARR-VFDEIVNPSDVSWNVIV 235
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 173/634 (27%), Positives = 293/634 (46%), Gaps = 61/634 (9%)
Query: 76 TFAGVLAYCGST-RNL--RLGEAIHGSVLV-TGMDGMIFVMNSLINMYSKCKRIEAARVL 131
T A VL C S +N+ R G IH V+ + + +FV NSL++ Y + RIE A L
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 132 FDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM-HRSGLDFSDYTLGSALKACCVDK 190
F D VSWN +IAGY + F+ F+L + H+ + T+ S L C
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFK-AFQLFHNLVHKGDVSPDSVTIISILPVCAQLT 344
Query: 191 SLNCIGKMLHVCAIKLD-LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
L GK +H ++ L + VG AL+ YA+ G + A F + +N +
Sbjct: 345 DLAS-GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAI 403
Query: 250 IAGF------LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGR 303
+ F Q + EA+ L T S++K C+ + +
Sbjct: 404 LDAFADSPKQFQFLNLLHHLLNEAITL-----------DSVTILSLLKFCINVQGIGKVK 452
Query: 304 QIHAQICKKNLQCDE-------------------------FVGCS----LVDFYSFF--- 331
++H K L DE F+G S LV + S
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 332 ---GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
GS DD F D+ +W+ M+ E+ A+ + R+ A G +P+ +
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 389 SVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP 448
+++ VCA +A+ Q G+ ++ G+ + I ++ + + +YAK G + A FQ
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
D+V ++ M+ A HG EAL I+ MT S IKP+H+ + +LTAC H GL+ +GL+ +
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
+ ++ +G+ ++ C VDL+ R GRL+DA F+ + +W LL AC +
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Query: 569 TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
+G +A+ +++ E ++VL+ N+Y K + +E+R LM+ + +KK G SW+E
Sbjct: 752 MDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Query: 629 VGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK 662
V + ++F+ D SHP I+ + + +++ +
Sbjct: 812 VDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 245/575 (42%), Gaps = 45/575 (7%)
Query: 67 IAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIE 126
++G F V+ C S +L G A+HG V G V S++NMY+KC+R++
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 127 AARVLFDTCDELDDVSWNSIIAGY-VRLGDGFREVFELLARMHRSGLDFSDYTLGSALKA 185
+ +F D LD V WN ++ G V G RE MH + + +
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSVSCG---RETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 186 CCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG-CLTDAVLVFESFRYHNDF 244
CV + GK +H IK L + +VG AL+ MYAK G DA F+ +
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 245 MYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF---RA 301
+N +IAGF + ++ +A FC M + T ++++ C ++ R+
Sbjct: 191 SWNAIIAGFSENNMMA-----DAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 302 GRQIHAQICKKN-LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
GRQIH+ + +++ LQ FV SLV FY G I++ F D+VSW +IAG
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 361 ENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG-ISNF 418
N ++ A L + G PD + S++ VCA + SG++I + L+ +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
V N+ I YA+ GD +A F + D++SW+ ++ A + L + +
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 479 SGIKPNHITLLGVLTAC-----------SHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
I + +T+L +L C HG V GL + E K +
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDE---------EEPKLGNAL 476
Query: 528 VDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGA---CRVHKDTMMGKHIADRVIELEP 584
+D + G +E A + L V + +LL H D M E+
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQM------LFTEMST 530
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
++ L+ IY ++ A+ V + +Q +G++
Sbjct: 531 TDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 16/222 (7%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
SC ++ FRE + G+ + T +L C +L L HG ++ G+ G I +
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRL 604
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
+L+++Y+KC ++ A +F + D V + +++AGY G G +E + + M S
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRG-KEALMIYSHMTESN 663
Query: 172 LDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
+ + + L ACC + L + V +K M +D+ A+ G
Sbjct: 664 IKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMK----PTMEQYACAVDLIARGGR 719
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
L DA SF N I G L R + Y R LG
Sbjct: 720 LDDAY----SFVTQMPVEPNANIWGTLLRACTT--YNRMDLG 755
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 221/431 (51%), Gaps = 41/431 (9%)
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQ-----IHAQICKKNLQC 316
G EA F +M + G+ + TF +++ C GDF +G + +H CK L
Sbjct: 50 GRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGDLLHGYACKLGLDR 106
Query: 317 DE-FVGCSLVDFYS-------------------------------FFGSIDDGIRCFNST 344
+ VG +++ YS G +D+ + F+
Sbjct: 107 NHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
Query: 345 PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGE 404
P+ D++SWT+MI G V+ G E AL R+ SG KPD + + + C ++ A G
Sbjct: 167 PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGL 226
Query: 405 QIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHG 464
+ + L N + V NS I +Y + G ++ AR F +E VVSW+ +I A +G
Sbjct: 227 WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANG 286
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
A+E+L F M G KP+ +T G LTACSH GLV+EGLRYF+IMK DY I+ ++H
Sbjct: 287 NAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY 346
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH-KDTMMGKHIADRVIELE 583
C+VDL RAGRLEDA + + + V+ +LL AC H + ++ + + + +L
Sbjct: 347 GCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLN 406
Query: 584 PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSH 643
+ ++YV+L N+Y GK + A ++R+ M+ G+KK+PG S IE+ +H+F+ D +H
Sbjct: 407 VKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAH 466
Query: 644 PMSQLIYSRLE 654
+ I LE
Sbjct: 467 VETTYIREVLE 477
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 160/339 (47%), Gaps = 45/339 (13%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCG--STRNLRLGEAIHGSVLVTGMD-GMIFVMNSLINM 118
F + +AG+ + TF +L+ CG ++ + LG+ +HG G+D + V ++I M
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 119 YSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD----------------------- 155
YSK R + AR++FD ++ + V+WN++I GY+R G
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 156 ------GFREVFELLAR-MHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
G++E L R M SG+ + +AL AC +L+ G +H + D
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALS-FGLWVHRYVLSQDF 237
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+N+ V +L+D+Y + GC+ A VF + +N++I GF + G A E+L
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGF-----AANGNAHESL 292
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSLV 325
F +MQ G TF+ + AC +G G + + QI K + + E GC LV
Sbjct: 293 VYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGC-LV 350
Query: 326 DFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENG 363
D YS G ++D ++ S P K + V S++A C +G
Sbjct: 351 DLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 165/397 (41%), Gaps = 54/397 (13%)
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGS---------ALKACCVD-- 189
VSW S I R G R+ + +FSD TL AL + C D
Sbjct: 37 VSWTSRINLLTRNG-----------RLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMV-VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
+G +LH A KL L+ N V VGTA++ MY+K G A LVF+ N +NT
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 249 MIAGFL----------------QRQTVSC----------GYAREALGLFCEMQMLGLNCS 282
MI G++ +R +S GY EAL F EMQ+ G+
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFN 342
+ + AC +G G +H + ++ + + V SL+D Y G ++ + F
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARS 402
+ K VVSW S+I G NG +L R+ G KPD + + C+ +
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 403 G-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE--IENPDVVSWSEMICC 459
G Q + IS I + +Y+++G ++ A Q ++ +VV S + C
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 460 NAHHGFANEALRIFELMTVSGIK--PNHITLLGVLTA 494
+ H A R+ + +T +K N++ L + A
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAA 422
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 338 IRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADM 397
I+ N + VSWTS I NG+ A +G +P+ +++ C D
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 398 AAARS--GEQIQGWALKFGIS-NFIIVQNSQICMYAKSGDIDSARLTFQEIENP------ 448
+ G+ + G+A K G+ N ++V + I MY+K G ARL F +E+
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 449 -------------------------DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
D++SW+ MI G+ EAL F M +SG+KP
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 484 NHITLLGVLTACSHGGLVDEGL---RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
+++ ++ L AC++ G + GL RY ++ +D+ NV+ S ++DL R G +E A
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRY--VLSQDF--KNNVRVSNSLIDLYCRCGCVEFA 260
Query: 541 KR 542
++
Sbjct: 261 RQ 262
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FD+ P+R +IS + +LL FRE +I+G+ L C +
Sbjct: 162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G +H VL + V NSLI++Y +C +E AR +F ++ VSWNS+I G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIK 205
+ G+ E +M G T AL AC V++ L + +
Sbjct: 282 FAANGNA-HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL----RYFQIMKCD 336
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESF 238
++ + L+D+Y++ G L DA+ + +S
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 278/547 (50%), Gaps = 23/547 (4%)
Query: 125 IEAARVLFDTCDELDDVSW-NSIIAGYVRLGDGFREVFELLARMHRSGLDFSD-YTLGSA 182
I AR LFD + DD NS+I Y+ + + F L + + D +T +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQ-YPDSFALYRDLRKETCFAPDNFTFTTL 84
Query: 183 LKACCVDKSLNCI--GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
K+C + C+ G LH + ++M V T ++DMYAK G + A F+ +
Sbjct: 85 TKSCSLSM---CVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPH 141
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
++ + +I+G+++ CG A LF +M + +++++ V GD
Sbjct: 142 RSEVSWTALISGYIR-----CGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMT 193
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
+ R++ ++ K + +++ Y ID + F++ P+ ++VSW +MI G
Sbjct: 194 SARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYC 249
Query: 361 ENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFI 419
+N + + + L ++ A+ PD+ + SV+ +D A GE + + + +
Sbjct: 250 QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKV 309
Query: 420 IVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVS 479
V + + MY+K G+I+ A+ F E+ V SW+ MI A +G A AL +F M +
Sbjct: 310 KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE 369
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
KP+ IT+L V+TAC+HGGLV+EG ++F +M+ + G+ A ++H C+VDLLGRAG L++
Sbjct: 370 E-KPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKE 427
Query: 540 AKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYND 599
A+ I + F + ++ + L AC +KD + I + +ELEP +YVLL N+Y
Sbjct: 428 AEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAA 487
Query: 600 AGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVK 659
+ V+ +M+ KKE G S IE+ V F+ D +HP + I+ L ++L+
Sbjct: 488 DKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMH 547
Query: 660 INKIEFG 666
+N+ ++
Sbjct: 548 MNEEKYN 554
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 157/370 (42%), Gaps = 33/370 (8%)
Query: 41 LFDETPQR-------SIISC-----NSPASLLAFREARIAGLPVSD-FTFAGVLAYCGST 87
LFD+ PQR S+I P S +R+ R D FTF + C +
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLS 91
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
+ G +H + G ++V +++MY+K ++ AR FD +VSW ++I
Sbjct: 92 MCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALI 151
Query: 148 AGYVRLG--DGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
+GY+R G D ++F+ + H + + + +K+ + + +M H
Sbjct: 152 SGYIRCGELDLASKLFDQMP--HVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH----- 204
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
++ T ++ Y + A +F++ N +NTMI G+ Q + +
Sbjct: 205 ----KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ-----PQ 255
Query: 266 EALGLFCEMQ-MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
E + LF EMQ L+ T S++ A G G H + +K L V ++
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
+D YS G I+ R F+ P+ V SW +MI G NG AL L M KPDE
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDE 374
Query: 385 FIMSSVMGVC 394
M +V+ C
Sbjct: 375 ITMLAVITAC 384
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREAR-IAGLPVSDFTFAGVLAYCGSTR 88
LFD P+R+++S N+ + F+E + L D T VL T
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L LGE H V +D + V ++++MYSKC IE A+ +FD E SWN++I
Sbjct: 289 ALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIH 348
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
GY G+ R +L M + T+ + + AC + K HV ++ L
Sbjct: 349 GYALNGNA-RAALDLFVTMMIEEKP-DEITMLAVITACNHGGLVEEGRKWFHVMR-EMGL 405
Query: 209 NSNMVVGTALLDMYAKTGCLTDA 231
N+ + ++D+ + G L +A
Sbjct: 406 NAKIEHYGCMVDLLGRAGSLKEA 428
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/621 (29%), Positives = 289/621 (46%), Gaps = 63/621 (10%)
Query: 38 TLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIH 97
+ LFDE P+R+++S N+ + G RN + +A
Sbjct: 157 AVELFDEMPERNVVSWNTLVT--------------------------GLIRNGDMEKAKQ 190
Query: 98 GSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGF 157
+ D + N++I Y + +E A++LF E + V+W S++ GY R GD
Sbjct: 191 VFDAMPSRD--VVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGD-V 247
Query: 158 REVFELLARM-HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGT 216
RE + L M R+ + ++ G A + ++ +K D+++ G
Sbjct: 248 REAYRLFCEMPERNIVSWTAMISGFAWNELYREA-------LMLFLEMKKDVDAVSPNGE 300
Query: 217 ALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ------RQTVSCGYAREALGL 270
L+ + G L FR + ++ +I+ + R S + + GL
Sbjct: 301 TLISLAYACGGLG------VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 271 FCEMQMLGLNCSKFTFSS---IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDF 327
Q L LN S F S I+ + GD + ++ K+L D+ S++D
Sbjct: 355 IASAQSL-LNES-FDLQSCNIIINRYLKNGDLERAETLFERV--KSLH-DKVSWTSMIDG 409
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
Y G + F D V+WT MI+G V+N F A SLL + G KP
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTY 469
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFG--ISNFIIVQNSQICMYAKSGDIDSARLTFQEI 445
S ++ + G+ I K +I+QNS + MYAK G I+ A F ++
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Query: 446 ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
D VSW+ MI +HHG A++AL +F+ M SG KPN +T LGVL+ACSH GL+ GL
Sbjct: 530 VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGL 589
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRV 565
F+ MK+ Y I + H ++DLLGRAG+L++A+ FI F D ++ ALLG C +
Sbjct: 590 ELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGL 649
Query: 566 HKDTMMGKHIAD----RVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
+ + IA+ R++EL+P A +V L N+Y G+ E+RK M +GVKK
Sbjct: 650 NWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKT 709
Query: 622 PGISWIEVGSKVHMFLVDDRS 642
PG SW+ V + ++FL D+S
Sbjct: 710 PGCSWVVVNGRANVFLSGDKS 730
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 127/624 (20%), Positives = 233/624 (37%), Gaps = 156/624 (25%)
Query: 88 RNLRLGEAIHGSVLVT-----GMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVS 142
R L G +H L+ G + SL++ Y+K ++ ARVLF+ E + V+
Sbjct: 51 RRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVT 110
Query: 143 WNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVC 202
N+++ GYV+ RM+ + F +
Sbjct: 111 CNAMLTGYVKC-----------RRMNEAWTLFRE-------------------------- 133
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
+ N+V T +L G DAV +F+ N +NT++ G ++ G
Sbjct: 134 -----MPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRN-----G 183
Query: 263 YAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGC 322
+A +F M + ++++++K + + + + +KN+
Sbjct: 184 DMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWT 235
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM--ASGR 380
S+V Y +G + + R F P+ ++VSWT+MI+G N + AL L +
Sbjct: 236 SMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAV 295
Query: 381 KPDEFIMSSVMGVCADMAAA--RSGEQIQ------GWAL-------------KFGISNFI 419
P+ + S+ C + R GEQ+ GW + S I
Sbjct: 296 SPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLI 355
Query: 420 IVQNS--------QIC-----MYAKSGDIDSARLTFQEIEN-PDVVSWSEMICCNAHHGF 465
S Q C Y K+GD++ A F+ +++ D VSW+ MI G
Sbjct: 356 ASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 415
Query: 466 ANEALRIFELM----------TVSGIKPNHI-----TLLGVLTACSHGGLVDEGLRYFEI 510
+ A +F+ + +SG+ N + +LL + C L + +
Sbjct: 416 VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST----YSV 471
Query: 511 MKKDYGITANV---KHSTCI------------------VDLLGRAGRLEDAKRFILDSGF 549
+ G T+N+ KH C+ V + + G +EDA I
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE-IFAKMV 530
Query: 550 ADDPVMWRALLGACRVHKDTMMGKHIADRVIEL---------EPHAAASYVLLYNIYNDA 600
D V W +++ H +AD+ + L +P+ + +++ + + + +
Sbjct: 531 QKDTVSWNSMIMGLSHHG-------LADKALNLFKEMLDSGKKPN-SVTFLGVLSACSHS 582
Query: 601 GKEKRALEVRKLMQDQGVKKEPGI 624
G R LE+ K M++ +PGI
Sbjct: 583 GLITRGLELFKAMKET-YSIQPGI 605
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 244/485 (50%), Gaps = 44/485 (9%)
Query: 220 DMYAKTGCLTDAVLVFESFRYHND---FMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM 276
D+ + + + V + F +H + F+YN +I + E++ L+ +
Sbjct: 21 DLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQ-----PHESIVLYNLLSF 75
Query: 277 LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI-- 334
GL S TF+ I A + R R +H+Q + + D F +L+ Y+ G++
Sbjct: 76 DGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCC 135
Query: 335 -----------------------------DDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
+ F+S P+ +V SWT++I+G +NG +
Sbjct: 136 ARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNY 195
Query: 366 ETALSL-LRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNS 424
AL + L KP+ + SV+ CA++ G +++G+A + G + I V N+
Sbjct: 196 SEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNA 255
Query: 425 QICMYAKSGDIDSARLTFQEIENP-DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
I MY+K G ID A+ F+E+ N ++ SW+ MI A HG +EAL +F M G KP
Sbjct: 256 TIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP 315
Query: 484 NHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
+ +T +G+L AC HGG+V +G F+ M++ + I+ ++H C++DLLGR G+L++A
Sbjct: 316 DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 375
Query: 544 ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKE 603
I D V+W LLGAC H + + + ++ + +LEP + V++ NIY K
Sbjct: 376 IKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 435
Query: 604 KRALEVRKLMQDQGVKKEPGISW-IEVGSKVHMFLVDDRSHPMSQLIYSRLEEML--VKI 660
L +RKLM+ + + K G S+ +EVG VH F V+D+SHP S IY LEE+ +K+
Sbjct: 436 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Query: 661 NKIEF 665
K F
Sbjct: 496 EKSRF 500
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 146/365 (40%), Gaps = 46/365 (12%)
Query: 41 LFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSV 100
L+++ Q + S++ + GL S TF + A S + R +H
Sbjct: 49 LYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQF 108
Query: 101 LVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREV 160
+G + F +LI Y+K + AR +FD + D WN++I GY R GD +
Sbjct: 109 FRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD-MKAA 167
Query: 161 FELLARMHRSGL--------------DFSD------------------YTLGSALKACCV 188
EL M R + ++S+ T+ S L AC
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACAN 227
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDF-MYN 247
L IG+ L A + N+ V A ++MY+K G + A +FE + +N
Sbjct: 228 LGELE-IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 286
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
+MI + G EAL LF +M G TF ++ ACV G G+++
Sbjct: 287 SMIGSL-----ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 308 ---QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENG 363
++ K + + + + GC ++D G + + + P K D V W +++ C +G
Sbjct: 342 SMEEVHKISPKLEHY-GC-MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Query: 364 KFETA 368
E A
Sbjct: 400 NVEIA 404
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 273/559 (48%), Gaps = 53/559 (9%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELD 139
+L G+ + L +HG V G + NSL+ Y +E A +FD + D
Sbjct: 61 LLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPD 120
Query: 140 DVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKML 199
+SWNS+++GYV+ G F+E L +HRS + ++++ +AL A C L+ +G +
Sbjct: 121 VISWNSLVSGYVQSGR-FQEGICLFLELHRSDVFPNEFSFTAAL-AACARLHLSPLGACI 178
Query: 200 HVCAIKLDLNS-NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
H +KL L N+VVG L+DMY K G + DAVLVF+ + +N ++A
Sbjct: 179 HSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA------- 231
Query: 259 VSCGY-AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
SC + LGL+ QM N T++ ++ A V GDF Q+
Sbjct: 232 -SCSRNGKLELGLWFFHQMP--NPDTVTYNELIDAFVKSGDFNNAFQV------------ 276
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
+ P + SW +++ G V + K A + +
Sbjct: 277 -----------------------LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS 313
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
SG + DE+ +S V+ A +A G I A K G+ + ++V ++ I MY+K G +
Sbjct: 314 SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 438 ARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLTACS 496
A L F + +++ W+EMI A +G + EA+++F +L +KP+ T L +L CS
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 497 HGGLVDE-GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM 555
H + E L YFE+M +Y I +V+H ++ +G+ G + AK+ I + GF D V
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 556 WRALLGACRVHKDTMMGKHIADRVIELEPHAAAS--YVLLYNIYNDAGKEKRALEVRKLM 613
WRALLGAC KD K +A ++IEL Y+++ N+Y + + ++RK+M
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 614 QDQGVKKEPGISWIEVGSK 632
++ GV KE G SWI+ +K
Sbjct: 554 RESGVLKEVGSSWIDSRTK 572
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 147/328 (44%), Gaps = 82/328 (25%)
Query: 41 LFDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+FDE P +IS NS S + F E + + ++F+F LA C
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 90 LRLGEAIHGSVLVTGMD-GMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
LG IH ++ G++ G + V N LI+MY KC ++ A ++F +E D VSWN+I+A
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA 231
Query: 149 -------------------------------GYVRLGDGFREVFELLA------------ 165
+V+ GD F F++L+
Sbjct: 232 SCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGD-FNNAFQVLSDMPNPNSSSWNT 290
Query: 166 -------------------RMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKL 206
+MH SG+ F +Y+L S + A ++ G ++H CA KL
Sbjct: 291 ILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSL-SIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 207 DLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
L+S +VV +AL+DMY+K G L A L+F + N ++N MI+G+ + G + E
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN-----GDSIE 404
Query: 267 ALGLFCEM-QMLGLNCSKFTFSSIVKAC 293
A+ LF ++ Q L +FTF +++ C
Sbjct: 405 AIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 351 SWTSMIAGCVENGKFETALSLLR---QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
SW++++ G ++ +LR + + G KPD + ++ V + Q+
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFAN 467
G+ K G + + NS + Y S ++ A F E+ +PDV+SW+ ++ G
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 468 EALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
E + +F + S + PN + L AC+ L G + K NV C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 528 VDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
+D+ G+ G ++DA + D V W A++ +C
Sbjct: 199 IDMYGKCGFMDDAV-LVFQHMEEKDTVSWNAIVASC 233
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 226/442 (51%), Gaps = 17/442 (3%)
Query: 218 LLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML 277
L M G + A VF N ++ +MI G+L + + AR L E ++
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVS--ARRYFDLSPERDIV 91
Query: 278 GLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI-CKKNLQCDEFVGCSLVDFYSFFGSIDD 336
+++++ + +G+ R + Q+ C+ + + ++++ Y+ G ++
Sbjct: 92 -------LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWN-----TVLEGYANIGDMEA 139
Query: 337 GIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK-PDEFIMSSVMGVCA 395
R F+ P+ +V SW +I G +NG+ L ++ + G P++ M+ V+ CA
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA 199
Query: 396 DMAAARSGEQIQGWALKFGISNF-IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWS 454
+ A G+ + + G + + V+N+ I MY K G I+ A F+ I+ D++SW+
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 455 EMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
MI A HG EAL +F M SGI P+ +T +GVL AC H GLV++GL YF M D
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 515 YGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKH 574
+ I ++H C+VDLL RAG L A FI D V+W LLGA +V+K +G+
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 575 IADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVH 634
+ +I+LEP A++V+L NIY DAG+ A ++ M+D G KKE G+SWIE +
Sbjct: 380 ALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLV 439
Query: 635 MFLVDDRSHPMSQLIYSRLEEM 656
F HP ++ + L E+
Sbjct: 440 KFYSSGEKHPRTEELQRILREL 461
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 123/282 (43%), Gaps = 12/282 (4%)
Query: 113 NSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG- 171
N+++ Y+ +EA +FD E + SWN +I GY + G EV RM G
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGR-VSEVLGSFKRMVDEGS 183
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS-NMVVGTALLDMYAKTGCLTD 230
+ +D T+ L AC + + GK +H L N ++ V AL+DMY K G +
Sbjct: 184 VVPNDATMTLVLSACAKLGAFD-FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI 242
Query: 231 AVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIV 290
A+ VF+ + + +NTMI G + G+ EAL LF EM+ G++ K TF ++
Sbjct: 243 AMEVFKGIKRRDLISWNTMINGL-----AAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 291 KACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS-LVDFYSFFGSIDDGIRCFNSTP-KLD 348
AC +G G + E C +VD S G + + N P K D
Sbjct: 298 CACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKAD 357
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMA-SGRKPDEFIMSS 389
V W +++ K + L + + R P F+M S
Sbjct: 358 AVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 125 IEAARVLFDTCDELDDVSWNSIIAGYVRLGD--GFREVFELLARMHRSGLDFSDYTLGSA 182
I +A +F E + V W S+I GY+ D R F+L D L +
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPE--------RDIVLWNT 95
Query: 183 LKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVG-TALLDMYAKTGCLTDAVLVFESFRYH 241
+ + ++ +G ML ++ + V+ +L+ YA G + VF+
Sbjct: 96 MISGYIE-----MGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTFSSIVKACVAIGDFR 300
N F +N +I G+ Q VS E LG F M G + + T + ++ AC +G F
Sbjct: 151 NVFSWNGLIKGYAQNGRVS-----EVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 301 AGRQIH--AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG 358
G+ +H + N + D V +L+D Y G+I+ + F + D++SW +MI G
Sbjct: 206 FGKWVHKYGETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
+G AL+L + SG PD+ V+ C M G
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 22/210 (10%)
Query: 40 HLFDETPQRSIISCNS-----------PASLLAFREARIAGLPV-SDFTFAGVLAYCGST 87
+FD+ P+R++ S N L +F+ G V +D T VL+ C
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 88 RNLRLGEAIHGSVLVTGMDGM-IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI 146
G+ +H G + + + V N+LI+MY KC IE A +F D +SWN++
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM 261
Query: 147 IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC----CVDKSLNCIGKMLHVC 202
I G G G E L M SG+ T L AC V+ L M
Sbjct: 262 INGLAAHGHG-TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAV 232
+I ++ V +D+ ++ G LT AV
Sbjct: 321 SIMPEIEHCGCV----VDLLSRAGFLTQAV 346
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 201/367 (54%), Gaps = 8/367 (2%)
Query: 295 AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTS 354
++ RQ+ ++ ++N+ +++ Y+ G I + + F P+ DV SW +
Sbjct: 174 SVSHITLARQLFDEMSERNVVS----WTAMLSGYARSGDISNAVALFEDMPERDVPSWNA 229
Query: 355 MIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
++A C +NG F A+SL R+ + +P+E + V+ CA + + I +A +
Sbjct: 230 ILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR 289
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
+S+ + V NS + +Y K G+++ A F+ + +W+ MI C A HG + EA+ +F
Sbjct: 290 DLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVF 349
Query: 474 ELM---TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDL 530
E M ++ IKP+HIT +G+L AC+HGGLV +G YF++M +GI ++H C++DL
Sbjct: 350 EEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDL 409
Query: 531 LGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASY 590
LGRAGR ++A + D +W +LL AC++H + + ++ L P+
Sbjct: 410 LGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYV 469
Query: 591 VLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIY 650
++ N+Y + G + A RK+++ Q K PG S IE+ ++VH F D+SHP ++ IY
Sbjct: 470 AMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIY 529
Query: 651 SRLEEML 657
L+ ++
Sbjct: 530 MILDSLI 536
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 49/352 (13%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMY-SKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG 154
+H + +G + V +L++ Y S I AR LFD E + VSW ++++GY R G
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 155 D------------------------------GFREVFELLARM-HRSGLDFSDYTLGSAL 183
D F E L RM + + ++ T+ L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 184 KACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND 243
AC +L + K +H A + DL+S++ V +L+D+Y K G L +A VF+ +
Sbjct: 268 SACAQTGTLQ-LAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 244 FMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSK---FTFSSIVKACVAIGDFR 300
+N+MI F G + EA+ +F EM L +N K TF ++ AC G
Sbjct: 327 TAWNSMINCFALH-----GRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 381
Query: 301 AGRQIHAQICKKNLQCD---EFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMI 356
GR + + + E GC L+D G D+ + ++ K D W S++
Sbjct: 382 KGRG-YFDLMTNRFGIEPRIEHYGC-LIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLL 439
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFI--MSSVMGVCADMAAARSGEQI 406
C +G + A ++ +A ++ M+++ G + AR ++
Sbjct: 440 NACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
N+V TA+L YA++G +++AV +FE + +N ++A Q G EA+ L
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQN-----GLFLEAVSL 246
Query: 271 FCEM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
F M + ++ T ++ AC G + + IHA +++L D FV SLVD Y
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA---SGRKPDEFI 386
G++++ F K + +W SMI +G+ E A+++ + M + KPD
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 366
Query: 387 MSSVMGVCADMAAARSGE-QIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI 445
++ C G +FGI I I + ++G D A +
Sbjct: 367 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Query: 446 E-NPDVVSWSEMICCNAHHG 464
+ D W ++ HG
Sbjct: 427 KMKADEAIWGSLLNACKIHG 446
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN----------SQICM-- 428
+P+ FI V+ +++A S + K G +++VQ S I +
Sbjct: 123 RPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLAR 182
Query: 429 --------------------YAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANE 468
YA+SGDI +A F+++ DV SW+ ++ +G E
Sbjct: 183 QLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLE 242
Query: 469 ALRIFELM-TVSGIKPNHITLLGVLTACSHGGLVD--EGLRYFEIMKKDYGITANVKHST 525
A+ +F M I+PN +T++ VL+AC+ G + +G+ F ++D ++++V S
Sbjct: 243 AVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA-YRRD--LSSDVFVSN 299
Query: 526 CIVDLLGRAGRLEDA 540
+VDL G+ G LE+A
Sbjct: 300 SLVDLYGKCGNLEEA 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 41 LFDETPQRSIISCNSPASLLA-------FREA-----RIAGLPV---SDFTFAGVLAYCG 85
LF++ P+R + S N+ +LA F EA R+ P ++ T VL+ C
Sbjct: 215 LFEDMPERDVPSWNA---ILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
T L+L + IH + +FV NSL+++Y KC +E A +F + +WNS
Sbjct: 272 QTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 146 IIAGYVRLGDGFR--EVFELLARMHRSGLDFSDYTLGSALKAC 186
+I + G VFE + +++ + + T L AC
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/617 (26%), Positives = 286/617 (46%), Gaps = 60/617 (9%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD 155
+H ++V + F+ + LI+ Y++ R A +FD + S+N+++ Y +
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR-E 102
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN--------CIGKMLHVCAIKLD 207
+ + F L S SD ++ CV K+L+ + + +H I+
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS-CGYARE 266
+S++ VG ++ Y K + A VF+ + +N+MI+G+ Q + C +
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 267 ALGLFCEMQMLGLNCSKF-----TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
A+ L CS F T S+ +AC D G ++H ++ + ++Q D +
Sbjct: 223 AM----------LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVS------------------------------ 351
+++ FY+ GS+D F+ + D V+
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 352 -WTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWA 410
W +MI+G ++N E ++ R+ + G +P+ +SS++ + + G++I +A
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 411 LKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEAL 470
++ G N I V S I YAK G + A+ F ++ +++W+ +I A HG ++ A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 471 RIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDL 530
+F+ M G KP+ +TL VL+A +H G D F+ M Y I V+H C+V +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 531 LGRAGRLEDAKRFILDSGFADDPV--MWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
L RAG+L DA FI S DP+ +W ALL V D + + DR+ E+EP
Sbjct: 513 LSRAGKLSDAMEFI--SKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTG 570
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQL 648
+Y ++ N+Y AG+ + A VR M+ G+KK PG SWIE + F+ D S S+
Sbjct: 571 NYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKE 630
Query: 649 IYSRLEEMLVKINKIEF 665
+Y +E ++ ++ E+
Sbjct: 631 MYEIIEGLVESMSDKEY 647
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 146/608 (24%), Positives = 248/608 (40%), Gaps = 147/608 (24%)
Query: 9 QPNPFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIA 68
+P+ F+ SK T + LH+FDE R+ S N A L+A+ +
Sbjct: 54 KPDNFLASKLISFYT-------RQDRFRQALHVFDEITVRNAFSYN--ALLIAYTSREMY 104
Query: 69 GLPVSDFTFAGVLAYCGSTRNLR-----------------------LGEAIHGSVLVTGM 105
S F + + + C S+ R L +HG V+ G
Sbjct: 105 FDAFSLF-LSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 106 DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLA 165
D +FV N +I Y+KC IE+AR +FD E D VSWNS+I+GY + G FE
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGS-----FEDCK 218
Query: 166 RMHRSGLDFSDY-----TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLD 220
+M+++ L SD+ T+ S +AC L G +H I+ + ++ + A++
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDL-IFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 221 MYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLN 280
YAK G L A +F+ + Y +I+G++ G +EA+ LF EM+ +GL+
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAH-----GLVKEAMALFSEMESIGLS 332
Query: 281 C-------------------------------SKFTFSSIVKACVAIGDFRAGRQIHAQI 309
+ T SS++ + + + G++IHA
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETAL 369
+ + +V S++D Y+ G + R F++ +++WT++I +G ++A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY 429
SL Q G KPD+ +++V+ +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSA-----------------------------------F 477
Query: 430 AKSGDIDSAR------LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
A SGD D A+ LT +IE P V ++ M+ + G ++A+ M + I
Sbjct: 478 AHSGDSDMAQHIFDSMLTKYDIE-PGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Query: 484 ------NHITLLGVLT----ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
N ++LG L AC R FE+ ++ G + T + +L +
Sbjct: 537 VWGALLNGASVLGDLEIARFACD---------RLFEMEPENTG------NYTIMANLYTQ 581
Query: 534 AGRLEDAK 541
AGR E+A+
Sbjct: 582 AGRWEEAE 589
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 12/273 (4%)
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
Q+HA+I +++ D F+ L+ FY+ + F+ + S+ +++
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 364 KFETALSLLRQFMAS------GRKPDEFIMSSVMGV---CADMAAARSGEQIQGWALKFG 414
+ A SL ++ S +PD +S V+ C D Q+ G+ ++ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFE 474
+ + V N I Y K +I+SAR F E+ DVVSW+ MI + G + ++++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 475 LMTV-SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGR 533
M S KPN +T++ V AC + GL + M +++ I ++ ++ +
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAK 281
Query: 534 AGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
G L D R + D D V + A++ H
Sbjct: 282 CGSL-DYARALFDEMSEKDSVTYGAIISGYMAH 313
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 228/430 (53%), Gaps = 46/430 (10%)
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
EA F + LG+ ++FTF +++ + D + G+Q+H K L + FVG +++
Sbjct: 76 EASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVL 135
Query: 326 DFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQ----------- 374
+ Y ++ D RCF+ T +VVS T++I+G ++ +FE ALSL R
Sbjct: 136 NCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNA 195
Query: 375 ----FMASGRK-----------------PDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
F +GR P+E + +++A+ +G+ I A+KF
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF 255
Query: 414 GISNF-IIVQNSQICMYAKSGDIDSARLTFQEIENP--DVVSWSEMICCNAHHGFANEAL 470
F + V NS I Y+K G+++ + L F ++E ++VSW+ MI AH+G EA+
Sbjct: 256 LGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAV 315
Query: 471 RIFELMTV-SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITA--NVKHSTCI 527
+FE M + ++PN++T+LGVL AC+H GL+ EG YF DY ++H C+
Sbjct: 316 AMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACM 375
Query: 528 VDLLGRAGRLEDAKRFI----LDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELE 583
VD+L R+GR ++A+ I LD G W+ALLG C++H + + K A +++EL+
Sbjct: 376 VDMLSRSGRFKEAEELIKSMPLDPGIG----FWKALLGGCQIHSNKRLAKLAASKILELD 431
Query: 584 PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSH 643
P +SYV+L N Y+ + +R+ M++ G+K+ G SWIEV ++ +F+ D+++
Sbjct: 432 PRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNN 491
Query: 644 PMSQLIYSRL 653
+ +Y L
Sbjct: 492 ELKDEVYRML 501
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 33/310 (10%)
Query: 125 IEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALK 184
I A +FD ELD +S ++I +V+ E + R+ G+ +++T G+ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHV-EASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 185 ACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDF 244
+ + + +GK LH A+K+ L SN+ VG+A+L+ Y K LTDA F+ R N
Sbjct: 102 SSTTSRDVK-LGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 245 MYNTMIAGFLQRQTV--------------------------SCGYAREALGLFCEMQMLG 278
+I+G+L++ G EA+ F +M G
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 279 LNC-SKFTFSSIVKACVAIGDFRAGRQIHAQICK-KNLQCDEFVGCSLVDFYSFFGSIDD 336
+ ++ TF + A I AG+ IHA K + + FV SL+ FYS G+++D
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 337 GIRCFN--STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA-SGRKPDEFIMSSVMGV 393
+ FN + ++VSW SMI G NG+ E A+++ + + + +P+ + V+
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 394 CADMAAARSG 403
C + G
Sbjct: 341 CNHAGLIQEG 350
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 154/376 (40%), Gaps = 61/376 (16%)
Query: 37 RTLH-LFDETPQRSIISCNSPASLL-----------AFREARIAGLPVSDFTFAGVLAYC 84
R H +FDE P+ +IS + AF+ G+ ++FTF V+
Sbjct: 44 RNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSS 103
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
++R+++LG+ +H L G+ +FV ++++N Y K + AR FD + + VS
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI--------- 195
++I+GY++ + F E L M + + +G + ++++N
Sbjct: 164 NLISGYLKKHE-FEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 196 ----------------------GKMLHVCAIK-LDLNSNMVVGTALLDMYAKTGCLTDAV 232
GK +H CAIK L N+ V +L+ Y+K G + D++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 233 LVFESF--RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM-QMLGLNCSKFTFSSI 289
L F N +N+MI G+ G EA+ +F +M + L + T +
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHN-----GRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 290 VKACVAIGDFRAGRQIHAQICKK----NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
+ AC G + G + NL E C +VD S G + S P
Sbjct: 338 LFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYAC-MVDMLSRSGRFKEAEELIKSMP 396
Query: 346 KLD--VVSWTSMIAGC 359
LD + W +++ GC
Sbjct: 397 -LDPGIGFWKALLGGC 411
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGV 393
I + + F+ P+LDV+S T++I V+ + A ++ + G +P+EF +V+G
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 394 CADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSW 453
+ G+Q+ +ALK G+++ + V ++ + Y K + AR F + +P+VVS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 454 SEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK 513
+ +I EAL +F M + +T V+ S G +E + F M +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 514 DYGITANVKHSTCIV 528
+ + N C +
Sbjct: 219 EGVVIPNESTFPCAI 233
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 260/537 (48%), Gaps = 15/537 (2%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD 155
IHG ++ TG+D F ++ L+ +S I A +F+ + +N++I GY + D
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGY-SISD 104
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVG 215
F + ++ GL ++ + LK+C + ++ IG+ LH A++ +
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVS-IGEGLHGIALRSGFMVFTDLR 163
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHND-FMYNTMIAGFLQRQTVSCGYAREALGLFCEM 274
AL+ Y G ++DA VF+ D ++T++ G+LQ + AL LF M
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL-----ALDLFRIM 218
Query: 275 QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI 334
+ + + T S + A +GD H K L D + +L+ Y G I
Sbjct: 219 RKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGI 278
Query: 335 DDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC 394
R F+ + DVV+W MI + G E + LLRQ KP+ ++ C
Sbjct: 279 SSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC 338
Query: 395 ADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWS 454
A AA G + + I+ I+ + + MYAK G ++ A F +++ DV SW+
Sbjct: 339 AYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWT 398
Query: 455 EMICCNAHHGFANEALRIFELMTVSG--IKPNHITLLGVLTACSHGGLVDEGLRYFEIMK 512
MI HG A EA+ +F M ++PN IT L VL ACSHGGLV EG+R F+ M
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 513 KDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMG 572
+ Y T V+H C+VDLLGRAG+LE+A I + D WRALL ACRV+ + +G
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 573 KHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEV 629
+ + R+ E+ A +LL + AG +++L+ ++G +KE G S IE+
Sbjct: 519 ESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNE---LNKG-RKEAGYSAIEI 571
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 10/381 (2%)
Query: 18 FPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTF 77
F +L + +++ + + L +F+ + IS + F + R GL + F+F
Sbjct: 69 FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSF 128
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE 137
L C + +GE +HG L +G + N+LI+ Y C +I AR +FD +
Sbjct: 129 ITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQ 188
Query: 138 -LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
+D V++++++ GY+++ +L M +S + + TL S L A L+
Sbjct: 189 SVDAVTFSTLMNGYLQVSKKAL-ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSG-A 246
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ HV IK+ L+ ++ + TAL+ MY KTG ++ A +F+ + +N MI
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMI-----D 301
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
Q G E + L +M+ + + TF ++ +C GR + + ++ +
Sbjct: 302 QYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIAL 361
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
D +G +LVD Y+ G ++ + FN DV SWT+MI+G +G A++L +
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKME 421
Query: 377 ASGRK--PDEFIMSSVMGVCA 395
K P+E V+ C+
Sbjct: 422 EENCKVRPNEITFLVVLNACS 442
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 261/564 (46%), Gaps = 43/564 (7%)
Query: 76 TFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIF-VMNSLINMYSKCKRIEAARVLFDT 134
T + + CG R G A+HG + M V+NS+I+MY KC A +LF T
Sbjct: 395 TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Query: 135 CDELDDVSWNSIIAGYVRLG------DGFREVFELLARMHRSGLDFSDYTLGSALKACCV 188
D VSWNS+I+ + + G + F+EV S+Y+ C
Sbjct: 455 TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-------------SEYS--------CS 493
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM-YN 247
SL+ + +L C D + +++ G ++ K G LT A L E+ D +N
Sbjct: 494 KFSLSTVLAILTSC----DSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWN 549
Query: 248 TMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTFSSIVKACVAIGDFRAGRQIH 306
++I+G S G+ E+L F M G + T + A +G GR H
Sbjct: 550 SVISG-----CASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFE 366
K + D + +L+ Y I+ ++ F ++ SW +I+ +N
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 367 TALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQI 426
L R +P+E ++ + + G Q ++ G V + +
Sbjct: 665 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 427 CMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNH 485
MY+ G +++ F+ + +W+ +I + HG +A+ +F EL + S ++PN
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 781
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
+ + +L+ACSH G +DEGL Y++ M++ +G+ +H IVD+LGRAG+L +A FI
Sbjct: 782 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 546 DSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKR 605
G +W ALL AC H DT +GK +A+ + E+EP A+ Y+ L N Y G +
Sbjct: 842 GIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEE 901
Query: 606 ALEVRKLMQDQGVKKEPGISWIEV 629
A+ +RK+++D +KK PG S I+V
Sbjct: 902 AVRLRKMVEDNALKKLPGYSVIDV 925
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 30/476 (6%)
Query: 26 FSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCG 85
F++ V SP+ +LFDE P+R + S S + R+ VL
Sbjct: 56 FTSSVLSPVTPIVHNLFDELPERENRTMES--SFMFLRD---------------VLRSFM 98
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
++H L G+ + + L+ Y + + ++ LFD E D + WNS
Sbjct: 99 MRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNS 158
Query: 146 IIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
+I + G V + +H+ G +F D T + L+ MLH AI+
Sbjct: 159 MITALNQNGRYIAAVGLFIEMIHK-GNEF-DSTTLLLAASALSSLHLSRKCSMLHCLAIE 216
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAR 265
L + + AL+++YAK L+ A VF + + +NT++ + ++ G+ R
Sbjct: 217 TGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT-----KCLANGHPR 271
Query: 266 EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF--VGCS 323
++L F M G TFS ++ AC +I + G +H + K + VG S
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KP 382
++ YS G + F DV+S +++ G NG FE A +L Q + + +P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGI-SNFIIVQNSQICMYAKSGDIDSARLT 441
D + S+ +C D++ +R G + G+ ++ + S + V NS I MY K G A L
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 442 FQEIENPDVVSWSEMICCNAHHGFANEALRIFE--LMTVSGIKPNHITLLGVLTAC 495
F+ + D+VSW+ MI + +GF ++A +F+ + S K + T+L +LT+C
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 239/540 (44%), Gaps = 42/540 (7%)
Query: 96 IHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD 155
+H + TG+ G + N+L+N+Y+K + + +A +F + D VSWN+I+ + G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK--LDLNSNMV 213
R+ + M SG + T + AC + L +G+ LH IK +++
Sbjct: 270 P-RKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT-LGESLHGLVIKSGYSPEAHVS 327
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
VG +++ MY+K G A VFE + N ++ GF + G EA G+ +
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGF-----AANGMFEEAFGILNQ 382
Query: 274 MQMLG-LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF-VGCSLVDFYSFF 331
MQ + + T SI C + R GR +H + +Q V S++D Y
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G F +T D+VSW SMI+ +NG A +L ++ + S +F +S+V+
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE-VVSEYSCSKFSLSTVL 501
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI-ENPDV 450
+ ++ S +I S C K GD+ SA L + + E D+
Sbjct: 502 AILTSCDSSDS----------------LIFGKSVHCWLQKLGDLTSAFLRLETMSETRDL 545
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITLLGVLTACSHGGLVDEGLRYFE 509
SW+ +I A G E+LR F+ M+ G I+ + ITLLG ++A + GLV +G R F
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG-RCFH 604
Query: 510 IMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM--WRALLGACRVHK 567
+ + + ++ + GR +E A + G DP + W ++ A +K
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF---GLISDPNLCSWNCVISALSQNK 661
Query: 568 DTMMGKHIAD--RVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGIS 625
G+ + R ++LEP+ ++V L + G ++ + +G + P +S
Sbjct: 662 ---AGREVFQLFRNLKLEPN-EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 717
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 171/394 (43%), Gaps = 23/394 (5%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ +H A+K L ++ + LL Y +TG L + +F+ + + ++N+MI Q
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G A+GLF EM G T A ++ R +H + L
Sbjct: 167 -----GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
D + +L++ Y+ ++ F D+VSW +++ C+ NG +L +
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS--NFIIVQNSQICMYAKSGD 434
SG++ D S V+ C+ + GE + G +K G S + V NS I MY+K GD
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIKPNHITLLGVLT 493
++A F+E+ DV+S + ++ A +G EA I ++ +V I+P+ T++ + +
Sbjct: 342 TEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHST-------CIVDLLGRAGRLEDAKRFILD 546
C EG + +G T ++ + ++D+ G+ G L +
Sbjct: 402 ICGDLSFSREG-------RAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLFK 453
Query: 547 SGFADDPVMWRALLGACRVHKDTMMGKHIADRVI 580
+ D V W +++ A + T K++ V+
Sbjct: 454 TTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 259/537 (48%), Gaps = 14/537 (2%)
Query: 94 EAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRL 153
+ +H V + + + L Y+ + +AR LFD E WNSII Y +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK- 83
Query: 154 GDGFREVFELLARMHRSGLDFSDYT---LGSALKACCVDKSLNCIGKMLHVCAIKLDLNS 210
F V L +++ RS ++T L K L CI H AI L
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCI----HGIAIVSGLGF 139
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
+ + G+A++ Y+K G + +A +F S + ++N MI G+ CG+ + + L
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY-----GCCGFWDKGINL 194
Query: 271 FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
F MQ G + +T ++ + +HA K NL +VGC+LV+ YS
Sbjct: 195 FNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSR 254
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
I FNS + D+V+ +S+I G G + AL L + SG+KPD +++ V
Sbjct: 255 CMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIV 314
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV 450
+G CA+++ + SG+++ + ++ G+ I V ++ I MY+K G + A F I ++
Sbjct: 315 LGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNI 374
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEI 510
VS++ +I HGFA+ A F + G+ P+ IT +L C H GL+++G FE
Sbjct: 375 VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 511 MKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTM 570
MK ++GI +H +V L+G AG+LE+A F++ D + ALL C VH++T
Sbjct: 435 MKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTH 494
Query: 571 MGKHIADRVIELEPHAAASY-VLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
+ + +A+ + + + Y V+L N+Y G+ +R + + K PGISW
Sbjct: 495 LAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 54 NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMN 113
N +L F E R++G A VL C + G+ +H V+ G++ I V +
Sbjct: 288 NHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCS 347
Query: 114 SLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG-DGFREV-FELLARMHRSG 171
+LI+MYSKC ++ A LF E + VS+NS+I G LG GF FE + G
Sbjct: 348 ALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG---LGLHGFASTAFEKFTEILEMG 404
Query: 172 LDFSDYTLGSALKACCVDKSLN 193
L + T + L CC LN
Sbjct: 405 LIPDEITFSALLCTCCHSGLLN 426
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 270/573 (47%), Gaps = 74/573 (12%)
Query: 109 IFVMNSLINMYSKC---KRIEAARVLFDTCDELDDVSWNSIIAGYV---RLGDGFREVFE 162
+ N++I+ Y C + +E AR LFD D SWN++I+GY R+G+ +FE
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALL-LFE 160
Query: 163 LLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKML-----HVCAIKLDLNSNMVVGTA 217
+ R+ + +S G VD ++ KM +CA+ L N + A
Sbjct: 161 KMP--ERNAVSWSAMITGFCQNGE-VDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEA 217
Query: 218 LLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVS------------CG--Y 263
+ + G L S R + YNT+I G+ QR V CG +
Sbjct: 218 AW-VLGQYGSLV-------SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDH 269
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK-----NLQCDE 318
E FC+ + +++S++KA + +GD + R + Q+ + N D
Sbjct: 270 GGEFRERFCK--------NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG 321
Query: 319 FVGCS----------------------LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMI 356
+V S +V Y+ G+++ F TP+ VSW S+I
Sbjct: 322 YVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSII 381
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGIS 416
A +N ++ A+ L + G KPD ++S++ + R G Q+ +K I
Sbjct: 382 AAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP 441
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMICCNAHHGFANEALRIFEL 475
+ + V N+ I MY++ G+I +R F E++ +V++W+ MI A HG A+EAL +F
Sbjct: 442 D-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
M +GI P+HIT + VL AC+H GLVDE F M Y I ++H + +V++ G
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQG 560
Query: 536 RLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYN 595
+ E+A I F D +W ALL ACR++ + + A+ + LEP ++ YVLLYN
Sbjct: 561 QFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYN 620
Query: 596 IYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
+Y D G A +VR M+ + +KKE G SW++
Sbjct: 621 MYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 59/416 (14%)
Query: 14 IPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNS-----------PASLLAF 62
+PS+ F S + L LF++ P+R+ +S ++ ++++ F
Sbjct: 131 MPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLF 190
Query: 63 REARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAI-----HGSVLVTGMDGMIFVMNSLIN 117
R+ +PV D + L G +N RL EA +GS LV+G + +++ N+LI
Sbjct: 191 RK-----MPVKDSSPLCALV-AGLIKNERLSEAAWVLGQYGS-LVSGREDLVYAYNTLIV 243
Query: 118 MYSKCKRIEAARVLFDTCDEL--DD-------------VSWNSIIAGYVRLGD--GFREV 160
Y + ++EAAR LFD +L DD VSWNS+I Y+++GD R +
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLL 303
Query: 161 FELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLD 220
F+ + R + ++ G + ++ + +M + A ++ MV G
Sbjct: 304 FDQMK--DRDTISWNTMIDG-YVHVSRMEDAFALFSEMPNRDAHSWNM---MVSG----- 352
Query: 221 MYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLN 280
YA G + A FE + +N++IA + + + +EA+ LF M + G
Sbjct: 353 -YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY-----KEAVDLFIRMNIEGEK 406
Query: 281 CSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRC 340
T +S++ A + + R G Q+H QI K + D V +L+ YS G I + R
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRI 465
Query: 341 FNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCA 395
F+ K +V++W +MI G +G AL+L ++G P SV+ CA
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA 521
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 190/458 (41%), Gaps = 76/458 (16%)
Query: 219 LDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
L+ ++G + +A +FE N +NTMI+G+++R+ ++ +A LF M
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMN-----QARKLFDVMPKRD 101
Query: 279 LNCSKFTFSSIVKACVAIGDFR---AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSID 335
+ T+++++ V+ G R R++ ++ + D F +++ Y+ I
Sbjct: 102 V----VTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIG 153
Query: 336 DGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF-------------------- 375
+ + F P+ + VSW++MI G +NG+ ++A+ L R+
Sbjct: 154 EALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNER 213
Query: 376 -------------MASGRKPDEFIMSSVM---GVCADMAAARS-GEQI-------QGWAL 411
+ SGR+ + ++++ G + AAR +QI G
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 412 KFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALR 471
+ ++ NS I Y K GD+ SARL F ++++ D +SW+ MI H +A
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFA 333
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
+F M ++ + G + G V+ YFE + + ++ N I+
Sbjct: 334 LFSEMPNRDAHSWNMMVSGYASV----GNVELARHYFEKTPEKHTVSWN-----SIIAAY 384
Query: 532 GRAGRLEDAKRFILD---SGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
+ ++A + G DP +LL A + +G + V++
Sbjct: 385 EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP 444
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
+ L +Y+ G+ +E R++ + +K+E I+W
Sbjct: 445 VHNALITMYSRCGE---IMESRRIFDEMKLKREV-ITW 478
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 40 HLFDETPQRSIISCNSPASLLA----FREA-------RIAGLPVSDFTFAGVLAYCGSTR 88
H F++TP++ +S NS + ++EA I G T +L+
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLV 423
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD-ELDDVSWNSII 147
NLRLG +H V+ T + + V N+LI MYS+C I +R +FD + + ++WN++I
Sbjct: 424 NLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCA 203
GY G+ E L M +G+ S T S L AC VD++ M+ V
Sbjct: 483 GGYAFHGNA-SEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYK 541
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND 243
I+ M ++L+++ + G +A+ + S + D
Sbjct: 542 IE----PQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPD 577
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 202/390 (51%), Gaps = 7/390 (1%)
Query: 239 RYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
+Y F++N ++ +++ ++ +A+ ++ M + +++ ++KA V I D
Sbjct: 78 QYPIAFLWNNIMRSYIRHES-----PLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHD 132
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG 358
F G+++H+ + DEF + Y G ++ + F+ P+ + SW ++I G
Sbjct: 133 FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGG 192
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWAL--KFGIS 416
G+ A+ + SG +PD+F M SV C + Q+ L K
Sbjct: 193 LNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK 252
Query: 417 NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELM 476
+ I++ NS I MY K G +D A F+E+ +VVSWS MI A +G EAL F M
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
G++PN IT +GVL+AC HGGLV+EG YF +MK ++ + + H CIVDLL R G+
Sbjct: 313 REFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 537 LEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNI 596
L++AK+ + + + ++W L+G C D M + +A ++ELEP YV+L N+
Sbjct: 373 LKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANV 432
Query: 597 YNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
Y G K VRKLM+ + V K P S+
Sbjct: 433 YALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 163/383 (42%), Gaps = 32/383 (8%)
Query: 8 SQPNPFIPSKFPFLLTLPFSNPVHSPIRTRTLH-------LFDETP--------QRSIIS 52
S P P LL SN S R R +H + D+ P RS I
Sbjct: 36 SSVTPLSPQDRNKLLATLLSN-CTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIR 94
Query: 53 CNSPASLLAFREARIAGLPVSD-FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
SP + + + D ++ V+ + LG+ +H + G G F
Sbjct: 95 HESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFC 154
Query: 112 MNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG 171
+ I +Y K E AR +FD E SWN+II G G E E+ M RSG
Sbjct: 155 ESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA-NEAVEMFVDMKRSG 213
Query: 172 LDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI--KLDLNSNMVVGTALLDMYAKTGCLT 229
L+ D+T+ S +C L+ + LH C + K + S++++ +L+DMY K G +
Sbjct: 214 LEPDDFTMVSVTASCGGLGDLS-LAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMD 272
Query: 230 DAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI 289
A +FE R N +++MI G+ + G EAL F +M+ G+ +K TF +
Sbjct: 273 LASHIFEEMRQRNVVSWSSMIVGY-----AANGNTLEALECFRQMREFGVRPNKITFVGV 327
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSLVDFYSFFGSIDDGIRCFNSTP- 345
+ ACV G G+ A + K + + GC +VD S G + + + P
Sbjct: 328 LSACVHGGLVEEGKTYFAMM-KSEFELEPGLSHYGC-IVDLLSRDGQLKEAKKVVEEMPM 385
Query: 346 KLDVVSWTSMIAGCVENGKFETA 368
K +V+ W ++ GC + G E A
Sbjct: 386 KPNVMVWGCLMGGCEKFGDVEMA 408
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 222/424 (52%), Gaps = 12/424 (2%)
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVL-VFESFRYHNDFMYNTMIAGFLQRQTVSCGYARE 266
L SN+V+ + L+ Y+K L L VF Y N F +N +I F + G+A +
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRS-----GFASK 116
Query: 267 ALGLFCEMQMLGLNCSK---FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
++ LF ++M +C + FT I++AC A + ++G IH K FV +
Sbjct: 117 SIDLF--LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSA 174
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD 383
LV Y G + + F+ P D V +T+M G V+ G+ L++ R+ SG D
Sbjct: 175 LVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALD 234
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+M S++ C + A + G+ + GW ++ + + N+ MY K +D A F
Sbjct: 235 SVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV 294
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
+ DV+SWS +I G + ++F+ M GI+PN +T LGVL+AC+HGGLV++
Sbjct: 295 NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEK 354
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGAC 563
YF +M+ +Y I +KH + D + RAG LE+A++F+ D D + A+L C
Sbjct: 355 SWLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Query: 564 RVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPG 623
+V+ + +G+ +A +I+L+P A+ YV L +Y+ AG+ A +R+ M+++ + K PG
Sbjct: 414 KVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 473
Query: 624 ISWI 627
S I
Sbjct: 474 CSSI 477
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 167/410 (40%), Gaps = 25/410 (6%)
Query: 22 LTLPFSNPVHSPIRTRTLHLFDETPQRSIISCN------------SPASLLAFREARIAG 69
L L +S H + +L +F P R+I S N S + L R R +
Sbjct: 72 LVLAYSKLNH--LFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 129
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
+ DFT +L C ++R + G+ IH L G +FV ++L+ MY ++ AR
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
LFD D V + ++ GYV+ G+ + + M SG + S L AC
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGL-AMFREMGYSGFALDSVVMVSLLMACGQL 248
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
+L GK +H I+ + +G A+ DMY K L A VF + + ++++
Sbjct: 249 GALKH-GKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
I G+ V + LF EM G+ + TF ++ AC G +
Sbjct: 308 ILGYGLDGDVVMSFK-----LFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETA 368
+ N+ + S+ D S G +++ + P K D ++++GC G E
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 369 LSLLRQFMA-SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISN 417
+ R+ + RK ++ ++ G+ + E ++ W + IS
Sbjct: 423 ERVARELIQLKPRKASYYV--TLAGLYSAAGRFDEAESLRQWMKEKQISK 470
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 160/603 (26%), Positives = 288/603 (47%), Gaps = 22/603 (3%)
Query: 42 FDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNL 90
FDE R +++ N S ++ + E GL S TF VL+ C
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFC 128
Query: 91 RLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGY 150
R G +H V+ G +FV ++L+ +Y+ + ++ A LFD + + N ++ +
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCF 188
Query: 151 VRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN- 209
+ G+ R +FE+ RM G+ + T ++ C D+ L GK LH +K N
Sbjct: 189 CQTGESKR-LFEVYLRMELEGVAKNGLTYCYMIRGCSHDR-LVYEGKQLHSLVVKSGWNI 246
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
SN+ V L+D Y+ G L+ ++ F + + +N++++ G ++L
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS-----VCADYGSVLDSLD 301
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF-VGCSLVDFY 328
LF +MQ G S F S + C D ++G+QIH + K V +L+D Y
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 329 SFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
I++ + S P L++ S++ + G + + + + G DE +S
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLS 421
Query: 389 SVMGVCADM--AAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE 446
+V+ + + S + A+K G + + V S I Y KSG + +R F E++
Sbjct: 422 TVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD 481
Query: 447 NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLR 506
P++ + +I A +G + +++ M + P+ +T+L VL+ CSH GLV+EG
Sbjct: 482 TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGEL 541
Query: 507 YFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
F+ ++ YGI+ K C+VDLLGRAG +E A+R +L + D V W +LL +CR+H
Sbjct: 542 IFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIH 601
Query: 567 KDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
++ +G+ A+ ++ LEP A Y+ + Y + G + + ++R++ + + +E G S
Sbjct: 602 RNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSS 661
Query: 627 IEV 629
+ V
Sbjct: 662 VVV 664
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 204/440 (46%), Gaps = 14/440 (3%)
Query: 108 MIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARM 167
+++ N I+ K + +A FD D V++N +I+G R G R + EL A M
Sbjct: 45 LVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI-ELYAEM 103
Query: 168 HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
GL S T S L C D+ G +H I L NM V +AL+ +YA
Sbjct: 104 VSCGLRESASTFPSVLSV-CSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL 162
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFS 287
+ A+ +F+ N + N ++ F Q G ++ ++ M++ G+ + T+
Sbjct: 163 VDVALKLFDEMLDRNLAVCNLLLRCFCQT-----GESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 288 SIVKACVAIGDFRAGRQIHAQICKKNLQCDE-FVGCSLVDFYSFFGSIDDGIRCFNSTPK 346
+++ C G+Q+H+ + K FV LVD+YS G + +R FN+ P+
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE 277
Query: 347 LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
DV+SW S+++ C + G +L L + G++P S + C+ + +SG+QI
Sbjct: 278 KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
Query: 407 QGWALKFGIS-NFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGF 465
+ LK G + + VQ++ I MY K I+++ L +Q + ++ + ++ H G
Sbjct: 338 HCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGI 397
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM---KKDYGITANVK 522
+ + +F LM G + +TL VL A S + E L ++ G A+V
Sbjct: 398 TKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS--LPESLHSCTLVHCCAIKSGYAADVA 455
Query: 523 HSTCIVDLLGRAGRLEDAKR 542
S ++D ++G+ E +++
Sbjct: 456 VSCSLIDAYTKSGQNEVSRK 475
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 196/444 (44%), Gaps = 25/444 (5%)
Query: 38 TLHLFDETPQRSIISCN-----------SPASLLAFREARIAGLPVSDFTFAGVLAYCGS 86
L LFDE R++ CN S + + G+ + T+ ++ C
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 87 TRNLRLGEAIHGSVLVTGMD-GMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNS 145
R + G+ +H V+ +G + IFV N L++ YS C + + F+ E D +SWNS
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 146 IIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
I++ G + +L ++M G S S L C + + GK +H +K
Sbjct: 286 IVSVCADYGSVL-DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQS-GKQIHCYVLK 343
Query: 206 LDLN-SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
+ + S++ V +AL+DMY K + ++ L+++S N N+++ + CG
Sbjct: 344 MGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH-----CGIT 398
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKA-CVAIGD-FRAGRQIHAQICKKNLQCDEFVGC 322
++ + +F M G + T S+++KA +++ + + +H K D V C
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
SL+D Y+ G + + F+ ++ TS+I G NG + +LR+ P
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP 518
Query: 383 DEFIMSSVMGVCADMAAARSGEQI-QGWALKFGISNFIIVQNSQICMYAKSGDIDSA-RL 440
DE + SV+ C+ GE I K+GIS + + + ++G ++ A RL
Sbjct: 519 DEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
Query: 441 TFQEIENPDVVSWSEMI-CCNAHH 463
Q + D V+WS ++ C H
Sbjct: 579 LLQARGDADCVAWSSLLQSCRIHR 602
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 266/539 (49%), Gaps = 44/539 (8%)
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI-GKMLHVCAIKLDLNSNM 212
G F +V L + GL ++TL LK+ + + I G+ +H A+K L +
Sbjct: 24 GKSFTKVLALFGELRGQGLYPDNFTLPVVLKS--IGRLRKVIEGEKVHGYAVKAGLEFDS 81
Query: 213 VVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFC 272
V +L+ MYA G + VF+ + +N +I+ + V G +A+G+F
Sbjct: 82 YVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY-----VGNGRFEDAIGVFK 136
Query: 273 EM-QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK--------NLQCDEFVGC- 322
M Q L + T S + AC A+ + G +I+ + + N D F C
Sbjct: 137 RMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCG 196
Query: 323 ---------------------SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVE 361
S+V Y G ID+ F +P DVV WT+M+ G V+
Sbjct: 197 CLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQ 256
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
+F+ AL L R +G +PD F++ S++ CA A G+ I G+ + ++ +V
Sbjct: 257 FNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV 316
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
+ + MYAK G I++A F EI+ D SW+ +I A +G + AL ++ M G+
Sbjct: 317 GTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGV 376
Query: 482 KPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
+ + IT + VLTAC+HGG V EG + F M + + + +H +C++DLL RAG L++A+
Sbjct: 377 RLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAE 436
Query: 542 RFILD-SGFADDPV--MWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYN 598
I G +D+ + ++ +LL A R + + + + +A+++ ++E ++++ LL ++Y
Sbjct: 437 ELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYA 496
Query: 599 DAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDR--SHPMSQLIYSRLEE 655
A + + VR+ M+D G++K PG S IE+ H F+V D SHP I S L +
Sbjct: 497 SANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 189/404 (46%), Gaps = 34/404 (8%)
Query: 32 SPIRTRTLHLFDETPQRSIISCNSPASLLA-FREARIAGLPVSDFTFAGVLAYCGSTRNL 90
S ++T +L ++++ +S+ S +LA F E R GL +FT VL G R +
Sbjct: 4 SLLQTPSLLMYNKM-LKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 91 RLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGY 150
GE +HG + G++ +V NSL+ MY+ +IE +FD + D VSWN +I+ Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 151 VRLGDG-FREVFELLARM-HRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDL 208
V G+G F + + RM S L F + T+ S L AC K+L IG+ ++ + +
Sbjct: 123 V--GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLE-IGERIYRFVVT-EF 178
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL------------QR 256
++ +G AL+DM+ K GCL A VF+S R N + +M+ G++ +R
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 257 QTVS---------CGYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
V GY + EAL LF MQ G+ F S++ C G G
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
+ IH I + + D+ VG +LVD Y+ G I+ + F + D SWTS+I G N
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
G AL L + G + D +V+ C G +I
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKI 402
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 52/344 (15%)
Query: 38 TLHLFDETPQRSIISCNSPASLLA------------FREARIAGLPVSDFTFAGVLAYCG 85
T +FDE PQR ++S N S R ++ + L + T L+ C
Sbjct: 100 THKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS 159
Query: 86 STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKC----------------------- 122
+ +NL +GE I+ +VT + + + N+L++M+ KC
Sbjct: 160 ALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTS 218
Query: 123 --------KRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF 174
RI+ ARVLF+ D V W +++ GYV+ + F E EL M +G+
Sbjct: 219 MVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQF-NRFDEALELFRCMQTAGIRP 277
Query: 175 SDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
++ L S L C +L GK +H + + + VVGTAL+DMYAK GC+ A+ V
Sbjct: 278 DNFVLVSLLTGCAQTGALEQ-GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 235 FESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV 294
F + + + ++I G G + AL L+ EM+ +G+ TF +++ AC
Sbjct: 337 FYEIKERDTASWTSLIYGLAMN-----GMSGRALDLYYEMENVGVRLDAITFVAVLTACN 391
Query: 295 AIGDFRAGRQI-HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG 337
G GR+I H+ + N+Q L+D G +D+
Sbjct: 392 HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEA 435
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 25/336 (7%)
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARS 402
TP L + + M+ + F L+L + G PD F + V+ +
Sbjct: 7 QTPSL--LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 403 GEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAH 462
GE++ G+A+K G+ V NS + MYA G I+ F E+ DVVSW+ +I
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 463 HGFANEALRIFELMTV-SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
+G +A+ +F+ M+ S +K + T++ L+ACS ++ G R + + ++ ++ V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS--V 182
Query: 522 KHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVI- 580
+ +VD+ + G L+ A R + DS + W ++ V G+ RV+
Sbjct: 183 RIGNALVDMFCKCGCLDKA-RAVFDSMRDKNVKCWTSM-----VFGYVSTGRIDEARVLF 236
Query: 581 ELEP-HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGI-----------SWIE 628
E P + + N Y + ALE+ + MQ G++ + + +E
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 629 VGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIE 664
G +H ++ ++R + +++ + L +M K IE
Sbjct: 297 QGKWIHGYINENRV-TVDKVVGTALVDMYAKCGCIE 331
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 12/214 (5%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LF+ +P + ++ + +L FR + AG+ +F +L C T
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L G+ IHG + + V +L++MY+KC IE A +F E D SW S+I G
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYG 354
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLN 209
G R +L M G+ T + L AC + K+ H + ++
Sbjct: 355 LAMNGMSGR-ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQ 413
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHND 243
+ L+D+ + G L +A + + R +D
Sbjct: 414 PKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESD 447
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 197/369 (53%), Gaps = 21/369 (5%)
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCV 360
GRQIHA + K + SLV FYS G +D + F+ TP K ++V WT+MI+
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG--ISNF 418
EN A+ L ++ A + D I++ + CAD+ A + GE+I ++K ++
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
+ ++NS + MY KSG+ + AR F E DV +++ MI A +G A E+L +F+ M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 479 ------SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
+ I PN +T +GVL ACSH GLV+EG R+F+ M DY + H C+VDL
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVL 592
R+G L+DA FI + V+WR LLGAC +H + +G+ + R+ EL+ YV
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 593 LYNIYNDAG----KEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQL 648
L NIY G K K VRK ++ PG SWIE+GS ++ F V + QL
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRK-------RRMPGKSWIELGSIINEF-VSGPDNNDEQL 435
Query: 649 IYSRLEEML 657
+ + E+L
Sbjct: 436 MMGEISEVL 444
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 20/300 (6%)
Query: 93 GEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDD-VSWNSIIAGYV 151
G IH V G + +I + SL+ YS ++ AR +FD E + V W ++I+ Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 152 RLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD--LN 209
+ E EL RM ++ + AL AC D +G+ ++ +IK L
Sbjct: 144 E-NENSVEAIELFKRMEAEKIELDGVIVTVALSACA-DLGAVQMGEEIYSRSIKRKRRLA 201
Query: 210 SNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
++ + +LL+MY K+G A +F+ + Y +MI G+ G A+E+L
Sbjct: 202 MDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGY-----ALNGQAQESLE 256
Query: 270 LFCEMQMLG------LNCSKFTFSSIVKACVAIGDFRAG-RQIHAQICKKNLQCDE-FVG 321
LF +M+ + + + TF ++ AC G G R + I NL+ E G
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG 316
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
C +VD + G + D N P K + V W +++ C +G E + R+ R
Sbjct: 317 C-MVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDR 375
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 360 VENGK-FETALSLLRQFMASGRKPDEF-IMSSVMGVCADMAAARSGEQIQGWALKFGISN 417
+E+G+ + L +F S D F ++ ++ A A++ G QI K G +
Sbjct: 39 LESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNA 98
Query: 418 FIIVQNSQICMYAKSGDIDSARLTFQEI-ENPDVVSWSEMICCNAHHGFANEALRIFELM 476
I +Q S + Y+ GD+D AR F E E ++V W+ MI + + EA+ +F+ M
Sbjct: 99 VIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM 158
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAG 535
I+ + + + L+AC+ G V G Y +K+ + ++ ++++ ++G
Sbjct: 159 EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSG 218
Query: 536 RLEDAKRFILDSGFADDPVMWRALL 560
E A++ + D D + +++
Sbjct: 219 ETEKARK-LFDESMRKDVTTYTSMI 242
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 216/423 (51%), Gaps = 19/423 (4%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML-----GLNCSKFTFSS 288
+F+S N F+Y+TMI + ++ LGL + M+ + S TF
Sbjct: 69 IFDSIEIPNSFVYDTMI-------RICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHF 121
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNL-QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
++ AC+ F G+QIH + K + D V ++ Y + D + F+ P+
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP 181
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
DVV W ++ G V G L + R+ + G +PDEF +++ + CA + A G+ I
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 408 GWALKFG-ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFA 466
+ K I + + V + + MYAK G I++A F+++ +V SW+ +I A +G+A
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYA 301
Query: 467 NEALRIFE-LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+A+ E L GIKP+ + LLGVL AC+HGG ++EG E M+ Y IT +H +
Sbjct: 302 KKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYS 361
Query: 526 CIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEP- 584
CIVDL+ RAGRL+DA I +W ALL CR HK+ +G+ +++LE
Sbjct: 362 CIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKG 421
Query: 585 ---HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDR 641
A+ V L NIY + A +VR +++ +GV+K PG S +EV V F+ D
Sbjct: 422 NVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDV 481
Query: 642 SHP 644
SHP
Sbjct: 482 SHP 484
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 30/308 (9%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNS-----LINMYSKCKRIEA 127
S TF ++ C +G+ IH V+ G +F+ +S ++ +Y + K +
Sbjct: 115 SYLTFHFLIVACLKACFFSVGKQIHCWVVKNG----VFLSDSHVQTGVLRIYVEDKLLLD 170
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
AR +FD + D V W+ ++ GYVR G G E E+ M GL+ ++++ +AL AC
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLG-SEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 188 VDKSLNCIGKMLHVCAIKLD-LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
+L GK +H K + S++ VGTAL+DMYAK GC+ AV VF+ N F +
Sbjct: 230 QVGAL-AQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSW 288
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAGR-- 303
+I G+ + GYA++A+ ++ G+ ++ AC G GR
Sbjct: 289 AALIGGY-----AAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSM 343
Query: 304 ----QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS-WTSMIAG 358
+ +I K+ E C +VD G +DD + P + S W +++ G
Sbjct: 344 LENMEARYEITPKH----EHYSC-IVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 359 CVENGKFE 366
C + E
Sbjct: 399 CRTHKNVE 406
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 216/419 (51%), Gaps = 8/419 (1%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD 136
F +L C LG +HG+++ G+ G + V +SL+ Y++C + +A FD +
Sbjct: 187 FVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMME 245
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E D +SW ++I+ R G G + + + ++ L +++T+ S LKAC +K+L G
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP-NEFTVCSILKACSEEKALR-FG 303
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ +H +K + +++ VGT+L+DMYAK G ++D VF+ N + ++IA +
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G+ EA+ LF M+ L + T SI++AC ++G G+++HAQI K +++
Sbjct: 364 -----GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK 418
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
+ ++G +LV Y G D P DVVSWT+MI+GC G AL L++ +
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
G +P+ F SS + CA+ + G I A K + + V ++ I MYAK G +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
A F + ++VSW MI A +GF EAL++ M G + + +L+ C
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 245/494 (49%), Gaps = 15/494 (3%)
Query: 77 FAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD 136
+A + + S+ +RL + IH L D +I+ N+LI+ + + AR +FD+
Sbjct: 85 YALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMP 144
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIG 196
E + V+W ++I GY++ G E F L + G+ F++ + L C ++ +G
Sbjct: 145 EKNTVTWTAMIDGYLKYGLE-DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELG 203
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
+ +H +K+ + N++V ++L+ YA+ G LT A+ F+ + + +I+ ++
Sbjct: 204 RQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G+ +A+G+F M ++FT SI+KAC R GRQ+H+ + K+ ++
Sbjct: 263 -----GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM 376
D FVG SL+D Y+ G I D + F+ + V+WTS+IA G E A+SL R
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
+ + S++ C + A G+++ +K I + + ++ + +Y K G+
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
A Q++ + DVVSW+ MI + G +EAL + M G++PN T L AC+
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMW 556
+ + G I KK++ ++ NV + ++ + + G + +A R + DS + V W
Sbjct: 498 NSESLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFR-VFDSMPEKNLVSW 555
Query: 557 RALL------GACR 564
+A++ G CR
Sbjct: 556 KAMIMGYARNGFCR 569
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 181/373 (48%), Gaps = 18/373 (4%)
Query: 36 TRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPV-----------SDFTFAGVLAYC 84
T L FD ++ +IS + S + + I + + ++FT +L C
Sbjct: 235 TSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC 294
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
+ LR G +H V+ + +FV SL++MY+KC I R +FD + V+W
Sbjct: 295 SEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWT 354
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
SIIA + R G G E L M R L ++ T+ S L+AC +L +GK LH I
Sbjct: 355 SIIAAHAREGFG-EEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL-LLGKELHAQII 412
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYA 264
K + N+ +G+ L+ +Y K G DA V + + + MI+G S G+
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG-----CSSLGHE 467
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
EAL EM G+ + FT+SS +KAC GR IH+ K + + FVG +L
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 325 VDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDE 384
+ Y+ G + + R F+S P+ ++VSW +MI G NG AL L+ + A G + D+
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 385 FIMSSVMGVCADM 397
+I ++++ C D+
Sbjct: 588 YIFATILSTCGDI 600
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 225/442 (50%), Gaps = 19/442 (4%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQML-----GLNCSKFTFSS 288
+F+S N F+Y+TMI + ++ LGL + M+ + S TF
Sbjct: 69 IFDSIEIPNSFVYDTMI-------RICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNL-QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL 347
++ AC+ F G+QIH + K + D V ++ Y + D + F+ P+
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP 181
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
DVV W ++ G V G L + ++ + G +PDEF +++ + CA + A G+ I
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 408 GWALK-FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFA 466
+ K I + + V + + MYAK G I++A F+++ +V SW+ +I A +G+A
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYA 301
Query: 467 NEALRIFE-LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+A + + GIKP+ + LLGVL AC+HGG ++EG E M+ YGIT +H +
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS 361
Query: 526 CIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELE-- 583
CIVDL+ RAGRL+DA I +W ALL CR HK+ +G+ +++LE
Sbjct: 362 CIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKG 421
Query: 584 --PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDR 641
A+ V L NIY + A +VR +++ +G++K PG S +EV V F+ D
Sbjct: 422 NVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDV 481
Query: 642 SHPMSQLIYSRLEEMLVKINKI 663
SHP I++ + + V ++I
Sbjct: 482 SHPNLLQIHTLIHLLSVDASQI 503
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 158/369 (42%), Gaps = 47/369 (12%)
Query: 73 SDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGM---DGMIFVMNSLINMYSKCKRIEAAR 129
S TF ++ C +G+ IH V+ G+ DG V ++ +Y + K + AR
Sbjct: 115 SYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDG--HVQTGVLRIYVEDKLLFDAR 172
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVD 189
+FD + D V W+ ++ GYVR G G E E+ M G++ ++++ +AL AC
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLG-SEGLEVFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 190 KSLNCIGKMLH-VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
+L GK +H K + S++ VGTAL+DMYAK GC+ AV VFE N F +
Sbjct: 232 GAL-AQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAGRQIHA 307
+I G+ + GYA++A ++ G+ ++ AC G GR +
Sbjct: 291 LIGGY-----AAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 308 QICKKN--LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS-WTSMIAGC----- 359
+ + E C +VD G +DD + P + S W +++ GC
Sbjct: 346 NMEARYGITPKHEHYSC-IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKN 404
Query: 360 -------------VENGKFETALSLLRQ----FMASGRKPDEFIMSSVMGVCADMAAARS 402
+E G E + L Q + + R P+ F V G M R
Sbjct: 405 VELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAF---KVRG----MIEQRG 457
Query: 403 GEQIQGWAL 411
+ GW+L
Sbjct: 458 IRKTPGWSL 466
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 213 bits (542), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 225/469 (47%), Gaps = 43/469 (9%)
Query: 196 GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ 255
GK +H IK ++ + LL ++ K GCL+ A VF+ YN MI+G+L+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 256 RQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF-----RAGRQIHAQIC 310
G +E L L M G +T S ++KA + G R +HA+I
Sbjct: 113 H-----GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETAL- 369
K +++ D+ + +LVD Y G ++ F + +VV TSMI+G + G E A
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 370 --------------SLLRQFMASG----RKPDEFI-------------MSSVMGVCADMA 398
+++ F SG R D +I +SV+G C+ +
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
+ G+Q+ +K G+ I + +S + MYAK G I+ AR F +++ +V SW+ MI
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 459 CNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGIT 518
+G EAL +F M I+PN++T LG L+ACSH GLVD+G FE M++DY +
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 519 ANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADR 578
++H CIVDL+GRAG L A F D +W ALL +C +H + + A
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASE 467
Query: 579 VIELEPHA-AASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
+ +L +Y+ L N+Y K ++R++M+ + + K G SW
Sbjct: 468 LFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 202/443 (45%), Gaps = 43/443 (9%)
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE 137
AG L ++ + G+ IH ++ TG + + L+ ++ KC + AR +FD +
Sbjct: 38 AGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPK 97
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSL----N 193
++N +I+GY++ G +E+ L+ RM SG YTL LKA S
Sbjct: 98 PTLSAYNYMISGYLKHG-LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
+ +++H IK D+ + V+ TAL+D Y K+G L A VFE+ + N +MI+G+
Sbjct: 157 SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGY 216
Query: 254 LQRQTV---------------------------SCGYAREALGLFCEMQMLGLNCSKFTF 286
+ + V S A+ ++ ++ MQ G + + TF
Sbjct: 217 MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTF 276
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK 346
+S++ AC + G+Q+HAQI K + +G SL+D Y+ G I+D R F+ +
Sbjct: 277 ASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE 336
Query: 347 LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
+V SWTSMI G +NG E AL L + +P+ + C+ G +I
Sbjct: 337 KNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEI 396
Query: 407 -----QGWALKFGISNFIIVQNSQICMYAKSGDIDSA-RLTFQEIENPDVVSWSEMI-CC 459
+ +++K + ++ + + + ++GD++ A E PD W+ ++ C
Sbjct: 397 FESMQRDYSMKPKMEHYACI----VDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 460 NAHHGFANEALRIFELMTVSGIK 482
N H ++ EL ++ K
Sbjct: 453 NLHGNVELASIAASELFKLNADK 475
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
AG + TFA V+ C + +G+ +H ++ +G+ I + +SL++MY+KC I
Sbjct: 267 AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIND 326
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
AR +FD E + SW S+I GY + G+ E EL RM ++ + T AL AC
Sbjct: 327 ARRVFDQMQEKNVFSWTSMIDGYGKNGNP-EEALELFTRMKEFRIEPNYVTFLGALSACS 385
Query: 188 ----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDA 231
VDK M ++K M ++D+ + G L A
Sbjct: 386 HSGLVDKGYEIFESMQRDYSMK----PKMEHYACIVDLMGRAGDLNKA 429
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 240/501 (47%), Gaps = 75/501 (14%)
Query: 197 KMLHVCAIKLDLNSNM-VVGTALLDM-YAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
K +H + L SN+ VVG + + G L A +F+ + + N ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
Q + + L+ EM+ G++ ++TF+ ++KAC + G H ++ +
Sbjct: 89 QSMK-----PEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 315 QCDEFVGCSLVDF-------------------------------YSFFGSIDDGIRCFNS 343
+E+V +L+ F Y+ G ID+ +R F+
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 344 TP-------------------------------KLDVVSWTSMIAGCVENGKFETALSLL 372
P + DVV+W +MI+G V G + AL +
Sbjct: 204 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFG-ISNFIIV----QNSQIC 427
++ +G PD + S++ CA + +G+++ + L+ +S+ I V N+ I
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
MYAK G ID A F+ +++ D+ +W+ +I A H A ++ +FE M + PN +T
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVT 382
Query: 488 LLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDS 547
+GV+ ACSH G VDEG +YF +M+ Y I N+KH C+VD+LGRAG+LE+A F+
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 548 GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRAL 607
+ ++WR LLGAC+++ + +GK+ ++++ + + YVLL NIY G+
Sbjct: 443 KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQ 502
Query: 608 EVRKLMQDQGVKKEPGISWIE 628
+VRK+ D VKK G+S IE
Sbjct: 503 KVRKMFDDTRVKKPTGVSLIE 523
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 136/578 (23%), Positives = 226/578 (39%), Gaps = 129/578 (22%)
Query: 24 LPFSNPVHSPIRTRTLH-LFDETPQRSIISCN----------SPASLLA-FREARIAGLP 71
L +S + P + H LFDE P+ + CN P ++ + E G+
Sbjct: 50 LIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVS 109
Query: 72 VSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVL 131
+TF VL C G A HG V+ G +V N+LI ++ C + A L
Sbjct: 110 PDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASEL 169
Query: 132 FDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKS 191
FD + V+W+S+ +GY + G +D++
Sbjct: 170 FDDSAKAHKVAWSSMTSGYAKRGK--------------------------------IDEA 197
Query: 192 LNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLT-----DAVLVFESFRYHNDFMY 246
+ +M + K + N+++ TGCL A +F+ F + +
Sbjct: 198 MRLFDEMPY----KDQVAWNVMI----------TGCLKCKEMDSARELFDRFTEKDVVTW 243
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
N MI+G+ V+CGY +EALG+F EM+ G + T S++ AC +GD G+++H
Sbjct: 244 NAMISGY-----VNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 307 AQICKK-NLQCDEFVGC----SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVE 361
I + ++ +VG +L+D Y+ GSID I F D+ +W ++I G
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
+ E ++ + + P+E V+ C
Sbjct: 359 H-HAEGSIEMFEEMQRLKVWPNEVTFIGVILAC--------------------------- 390
Query: 422 QNSQICMYAKSGDIDSARLTFQEIEN-----PDVVSWSEMICCNAHHGFANEALRIFELM 476
+ SG +D R F + + P++ + M+ G EA E M
Sbjct: 391 --------SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 477 TVSGIKPNHITLLGVLTACSHGGLVDEGLRYFE---IMKK----DYGITANVKHSTCIVD 529
I+PN I +L AC G V+ G E M+K DY + +N+ ST D
Sbjct: 443 K---IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 530 LLGRAGRLEDAKRFILDSGFA-----DDPVMWRALLGA 562
+ + ++ D R +G + DD +M R LL +
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSS 537
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 20/330 (6%)
Query: 298 DFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF--GSIDDGIRCFNSTPKLDVVSWTSM 355
+ R +QIHA + L + V L+ S G++ + F+ PK DV +
Sbjct: 24 NIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHV 83
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
+ G ++ K E +SL + G PD + + V+ C+ + +G G ++ G
Sbjct: 84 LRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
V+N+ I +A GD+ A F + V+WS M A G +EA+R+F+
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
M + + ++T C +D F+ + +T N S + G
Sbjct: 204 MPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYV-----NCG 254
Query: 536 RLEDAK---RFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYV- 591
++A + + D+G D V +LL AC V D GK + ++E +++ YV
Sbjct: 255 YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVG 314
Query: 592 -----LLYNIYNDAGKEKRALEVRKLMQDQ 616
L ++Y G RA+EV + ++D+
Sbjct: 315 TPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 238/495 (48%), Gaps = 15/495 (3%)
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGK 197
L S+N++++ Y + D R +G +T KAC + GK
Sbjct: 69 LSSFSYNTLLSSYA-VCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR-EGK 126
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQ 257
+H K+ ++ V +L+ Y G +A VF + + +I GF +
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR-- 184
Query: 258 TVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD 317
G +EAL F +M + + T+ ++ + +G G+ IH I K+
Sbjct: 185 ---TGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFM- 376
G +L+D Y + D +R F K D VSW SMI+G V + + A+ L
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 377 ASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDID 436
+SG KPD I++SV+ CA + A G + + L GI + + + MYAK G I+
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 437 SARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
+A F I + +V +W+ ++ A HG E+LR FE M G KPN +T L L AC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 497 HGGLVDEGLRYFEIMK-KDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM 555
H GLVDEG RYF MK ++Y + ++H C++DLL RAG L++A + D +
Sbjct: 419 HTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRI 478
Query: 556 WRALLGACRVHKDTMM--GKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLM 613
A+L AC+ ++ T+M K I D +++E + YVLL NI+ + +R+LM
Sbjct: 479 CGAILSACK-NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLM 537
Query: 614 QDQGVKKEPGISWIE 628
+ +G+ K PG S+IE
Sbjct: 538 KVKGISKVPGSSYIE 552
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 205/488 (42%), Gaps = 60/488 (12%)
Query: 26 FSNPVHSPIRTRTLHLFDETPQRSIISCNSP-ASLLAFREARIAGLPVSDFTFAGVLAYC 84
+S+ + IR+ T S C+ P ++ A++ G FTF V C
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC 116
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G +R G+ IHG V G I+V NSL++ Y C A +F D VSW
Sbjct: 117 GKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWT 176
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDY--TLGSALKACCVDKSLNCIGKMLHVC 202
II G+ R G ++E + ++M + + Y L S+ + C+ +GK +H
Sbjct: 177 GIITGFTRTGL-YKEALDTFSKMDVEP-NLATYVCVLVSSGRVGCLS-----LGKGIHGL 229
Query: 203 AIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCG 262
+K ++ G AL+DMY K L+DA+ VF + +N+MI+G V C
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGL-----VHCE 284
Query: 263 YAREALGLFCEMQM-LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
++EA+ LF MQ G+ +S++ AC ++G GR +H I ++ D +G
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
++VD Y+ G I+ + FN +V +W +++ G +G +L + + G K
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
P+ + + C +G +D R
Sbjct: 405 PNLVTFLAALNAC-----------------------------------CHTGLVDEGRRY 429
Query: 442 FQEIEN------PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
F ++++ P + + MI G +EAL + + M V KP+ +L+AC
Sbjct: 430 FHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV---KPDVRICGAILSAC 486
Query: 496 SHGGLVDE 503
+ G + E
Sbjct: 487 KNRGTLME 494
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 283/606 (46%), Gaps = 64/606 (10%)
Query: 80 VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKR---IEAARVLFD--- 133
VL C ++ ++ IHG ++ TG+ + ++ ++ +R + AR +F
Sbjct: 18 VLGSCKTSDDV---NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 134 ----TCDELDD-VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCV 188
+ E++D WN++I + G R+ LL M +G+ ++L LKAC
Sbjct: 75 VCSFSFGEVEDPFLWNAVIKSHSH-GKDPRQALLLLCLMLENGVSVDKFSLSLVLKAC-- 131
Query: 189 DKSLNCI--GKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
L + G +H K L S++ + L+ +Y K GCL + +F+ + Y
Sbjct: 132 -SRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSY 190
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
N+MI G+ V CG A LF M M N +++S++ D G I
Sbjct: 191 NSMIDGY-----VKCGLIVSARELFDLMPMEMKNL--ISWNSMISGYAQTSD---GVDIA 240
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFE 366
+++ + D S++D Y G I+D F+ P+ DVV+W +MI G + G
Sbjct: 241 SKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVH 300
Query: 367 TALSLLRQF----------MASGRKPDEFIMSSVMGVCADM------------------A 398
A +L Q M +G +++ M + + + +DM A
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA-LEIFSDMEKESHLLPDDTTLVIVLPA 359
Query: 399 AARSGEQIQGWALKFGI--SNFII---VQNSQICMYAKSGDIDSARLTFQEIENPDVVSW 453
A+ G + + I F + + + I MY+K G I A L F+ IEN + W
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 454 SEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK 513
+ MI A HG A + + +KP+ IT +GVL ACSH GLV EGL FE+M++
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 514 DYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGK 573
+ I ++H C+VD+L R+G +E AK I + + V+WR L AC HK+ G+
Sbjct: 480 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Query: 574 HIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKV 633
+A +I + +SYVLL N+Y G K VR +M+++ ++K PG SWIE+ +V
Sbjct: 540 LVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRV 599
Query: 634 HMFLVD 639
H F VD
Sbjct: 600 HEFFVD 605
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 194/454 (42%), Gaps = 33/454 (7%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
G+ V F+ + VL C ++ G IHG + TG+ +F+ N LI +Y KC + +
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 129 RVLFDTCDELDDVSWNSIIAGYVRLG--DGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
R +FD + D VS+NS+I GYV+ G RE+F+L+ ++ + ++ G A +
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235
Query: 187 CVDKSLNCIGKMLHVCAIKLD----------------------LNSNMVVGTALLDMYAK 224
VD + M I + ++V ++D YAK
Sbjct: 236 GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 225 TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSK 283
G + A +F+ + + YN+M+AG++Q + Y EAL +F +M+ L
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK-----YHMEALEIFSDMEKESHLLPDD 350
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS 343
T ++ A +G +H I +K +G +L+D YS GSI + F
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
+ W +MI G +G E+A +L Q KPD+ V+ C+ + G
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 404 EQ-IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQE--IENPDVVSWSEMICCN 460
+ K I + + + ++SG I+ A+ +E +E DV+ + + C+
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Query: 461 AHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
H F L L+ +G P+ LL + A
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 124/304 (40%), Gaps = 30/304 (9%)
Query: 41 LFDETPQRSIISCNSPASLLAFREARIAGLPV-SDFTFAGVLAYCGSTRNLRLGEAIHGS 99
LFD+ P R +++ NS + + + L + SD L +T + L
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 100 VLVTGMDGMIFVMN-----------SLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
L +D ++++ +LI+MYSKC I+ A ++F+ + WN++I
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 149 GYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAI 204
G G G F++L ++ R L D T L AC V + L C M I
Sbjct: 425 GLAIHGLG-ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKI 483
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH-NDFMYNTMIAGFLQRQTVSCGY 263
+ L ++D+ +++G + A + E ND ++ T + + G
Sbjct: 484 EPRLQHY----GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG- 538
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
E + +Q G N S + S + A + G ++ R++ + K + ++ GCS
Sbjct: 539 --ELVAKHLILQA-GYNPSSYVLLSNMYA--SFGMWKDVRRVRTMM--KERKIEKIPGCS 591
Query: 324 LVDF 327
++
Sbjct: 592 WIEL 595
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/599 (25%), Positives = 275/599 (45%), Gaps = 48/599 (8%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
++ A +L+ C G+ +H + +G++ ++ L+ YS ++ A+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
+ L + WN +I Y+R F+E + RM G+ ++T S +KAC
Sbjct: 144 SEILHPLPWNVLIGSYIR-NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDF-A 201
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
G+++H N+ V AL+ MY + G + A +F+ + +N +I +
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI------------------------- 289
+ + EA L M + G+ S T+++I
Sbjct: 262 SEEKLG-----EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNV 316
Query: 290 ----------VKACVAIGDFRAGRQIHAQI---CKKNLQCDEFVGCSLVDFYSFFGSIDD 336
+KAC IG + G+ H + C + D V SL+ YS +
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRH 375
Query: 337 GIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
F + +W S+I+G N + E LL++ + SG P+ ++S++ + A
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 397 MAAARSGEQIQGWALKF-GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSE 455
+ + G++ + L+ + +I+ NS + MYAKSG+I +A+ F + D V+++
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 456 MICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDY 515
+I G AL F+ M SGIKP+H+T++ VL+ACSH LV EG F M+ +
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 516 GITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHI 575
GI ++H +C+VDL RAG L+ A+ + M LL AC +H +T +G+
Sbjct: 556 GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWA 615
Query: 576 ADR-VIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKV 633
AD+ ++E +P Y+LL ++Y G + + V+ L+ D GV+K + +E S++
Sbjct: 616 ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 198/429 (46%), Gaps = 50/429 (11%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
S+ ++ G+ +FT+ V+ C + + G +HGS+ V+ ++V N+LI+
Sbjct: 168 SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
MY + +++ AR LFD E D VSWN+II Y + E F+LL RM+ SG++ S
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS-EEKLGEAFKLLDRMYLSGVEASIV 286
Query: 178 TL----GSALKACCVDKSLNCI------------------------------GKMLHV-- 201
T G L+A +LNC+ GK+ H
Sbjct: 287 TWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLV 346
Query: 202 ---CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
C+ D+++ V +L+ MY++ L A +VF+ ++ +N++I+GF +
Sbjct: 347 IRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
+ E L EM + G + + T +SI+ +G+ + G++ H I ++ D
Sbjct: 404 -----SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 319 FV-GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
+ SLVD Y+ G I R F+S K D V++TS+I G GK E AL+ +
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQI-QGWALKFGISNFIIVQNSQICMYAKSGDID 436
SG KPD M +V+ C+ R G + FGI + + + +Y ++G +D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 437 SARLTFQEI 445
AR F I
Sbjct: 579 KARDIFHTI 587
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/599 (25%), Positives = 275/599 (45%), Gaps = 48/599 (8%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
++ A +L+ C G+ +H + +G++ ++ L+ YS ++ A+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 135 CDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
+ L + WN +I Y+R F+E + RM G+ ++T S +KAC
Sbjct: 144 SEILHPLPWNVLIGSYIR-NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDF-A 201
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
G+++H N+ V AL+ MY + G + A +F+ + +N +I +
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI------------------------- 289
+ + EA L M + G+ S T+++I
Sbjct: 262 SEEKLG-----EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNV 316
Query: 290 ----------VKACVAIGDFRAGRQIHAQI---CKKNLQCDEFVGCSLVDFYSFFGSIDD 336
+KAC IG + G+ H + C + D V SL+ YS +
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRH 375
Query: 337 GIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
F + +W S+I+G N + E LL++ + SG P+ ++S++ + A
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 397 MAAARSGEQIQGWALKF-GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSE 455
+ + G++ + L+ + +I+ NS + MYAKSG+I +A+ F + D V+++
Sbjct: 436 VGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 456 MICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDY 515
+I G AL F+ M SGIKP+H+T++ VL+ACSH LV EG F M+ +
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 516 GITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHI 575
GI ++H +C+VDL RAG L+ A+ + M LL AC +H +T +G+
Sbjct: 556 GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWA 615
Query: 576 ADR-VIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKV 633
AD+ ++E +P Y+LL ++Y G + + V+ L+ D GV+K + +E S++
Sbjct: 616 ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 198/429 (46%), Gaps = 50/429 (11%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
S+ ++ G+ +FT+ V+ C + + G +HGS+ V+ ++V N+LI+
Sbjct: 168 SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 118 MYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
MY + +++ AR LFD E D VSWN+II Y + E F+LL RM+ SG++ S
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS-EEKLGEAFKLLDRMYLSGVEASIV 286
Query: 178 TL----GSALKACCVDKSLNCI------------------------------GKMLHV-- 201
T G L+A +LNC+ GK+ H
Sbjct: 287 TWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLV 346
Query: 202 ---CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
C+ D+++ V +L+ MY++ L A +VF+ ++ +N++I+GF +
Sbjct: 347 IRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
+ E L EM + G + + T +SI+ +G+ + G++ H I ++ D
Sbjct: 404 -----SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 319 FV-GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
+ SLVD Y+ G I R F+S K D V++TS+I G GK E AL+ +
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQI-QGWALKFGISNFIIVQNSQICMYAKSGDID 436
SG KPD M +V+ C+ R G + FGI + + + +Y ++G +D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 437 SARLTFQEI 445
AR F I
Sbjct: 579 KARDIFHTI 587
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 194/399 (48%), Gaps = 34/399 (8%)
Query: 262 GYAREALGLFCEMQM-LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFV 320
G +AL LF +M L FS +K+C A G +HA K N + FV
Sbjct: 26 GNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFV 85
Query: 321 GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL-------- 372
GC+L+D Y S+ + F+ P+ + V W +MI+ GK + A+ L
Sbjct: 86 GCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPN 145
Query: 373 -------------------------RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
R+ + KP+ + +++ C+ + A R ++I
Sbjct: 146 ESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIH 205
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFAN 467
+A + I +++ + Y + G I +L F +E+ DVV+WS +I A HG A
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 468 EALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
AL+ F+ M ++ + P+ I L VL ACSH GL DE L YF+ M+ DYG+ A+ H +C+
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCL 325
Query: 528 VDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAA 587
VD+L R GR E+A + I W ALLGACR + + + + A ++ +EP
Sbjct: 326 VDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENP 385
Query: 588 ASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
A+YVLL IY G+++ A +R M++ GVK PG SW
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 182/437 (41%), Gaps = 61/437 (13%)
Query: 134 TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRS-GLDFSDYTLGSALKACCVDKSL 192
+C +L +S ++ Y G+ + L +MH S L + ALK+C
Sbjct: 8 SCTKL--ISLTKQLSSYANQGN-HEQALNLFLQMHSSFALPLDAHVFSLALKSCAA-AFR 63
Query: 193 NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG 252
+G +H ++K + SN VG ALLDMY K ++ A +F+ N ++N MI+
Sbjct: 64 PVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 253 FLQRQTVSCGYAREALGLFCEMQMLGLNCSKF---------------------------- 284
+ CG +EA+ L+ M ++ N S F
Sbjct: 124 YTH-----CGKVKEAVELYEAMDVMP-NESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR 177
Query: 285 ------TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
T ++V AC AIG FR ++IH+ + ++ + LV+ Y GSI
Sbjct: 178 FKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQ 237
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
F+S DVV+W+S+I+ +G E+AL ++ + PD+ +V+ C+
Sbjct: 238 LVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG 297
Query: 399 AARSG----EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI-ENPDVVSW 453
A +++QG +G+ + + + ++ G + A Q + E P +W
Sbjct: 298 LADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTW 354
Query: 454 SEMICCNAHHG---FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEI 510
++ ++G A A R EL+ V P + LLG + G +E R +
Sbjct: 355 GALLGACRNYGEIELAEIAAR--ELLMVEPENPANYVLLGKIYMSV--GRQEEAER-LRL 409
Query: 511 MKKDYGITANVKHSTCI 527
K+ G+ + S C+
Sbjct: 410 KMKESGVKVSPGSSWCL 426
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 226/442 (51%), Gaps = 10/442 (2%)
Query: 190 KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTM 249
KSL + K +H I + L+ + + LL + + T CL+ A+ + + F+YNT+
Sbjct: 20 KSLQNL-KQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSVFLYNTL 77
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLN---CSKFTFSSIVKACVAIGDF-RAGRQI 305
I+ + + + A L+ ++ N ++FT+ S+ KA + R GR +
Sbjct: 78 ISSIVSNHNSTQTHL--AFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRAL 135
Query: 306 HAQICK--KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
HA + K + + D FV +LV FY+ G + + F + D+ +W +++A +
Sbjct: 136 HAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSE 195
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
+ ++ +L FM +P+E + +++ CA++ G + LK ++ V
Sbjct: 196 EIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGT 255
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKP 483
S I +Y+K G + AR F E+ DV ++ MI A HGF E + +++ + G+ P
Sbjct: 256 SLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 484 NHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
+ T + ++ACSH GLVDEGL+ F MK YGI V+H C+VDLLGR+GRLE+A+
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 544 ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKE 603
I + +WR+ LG+ + H D G+ ++ LE + +YVLL NIY +
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRW 435
Query: 604 KRALEVRKLMQDQGVKKEPGIS 625
+ R+LM+D V K PGIS
Sbjct: 436 TDVEKTRELMKDHRVNKSPGIS 457
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 147/345 (42%), Gaps = 27/345 (7%)
Query: 49 SIISC-NSPASLLAFR------EARIAGLPVSDFTFAGVLAYCG-STRNLRLGEAIHGSV 100
SI+S NS + LAF +R + ++FT+ + G + R G A+H V
Sbjct: 80 SIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHV 139
Query: 101 L--VTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG--DG 156
L + ++ FV +L+ Y+ C ++ AR LF+ E D +WN+++A Y D
Sbjct: 140 LKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDS 199
Query: 157 FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGT 216
EV L RM + S AL C + G HV +K +L N VGT
Sbjct: 200 DEEVLLLFMRMQVRPNELSLV----ALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGT 255
Query: 217 ALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM 276
+L+D+Y+K GCL+ A VF+ + YN MI G G+ +E + L+ +
Sbjct: 256 SLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVH-----GFGQEGIELYKSLIS 310
Query: 277 LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSLVDFYSFFGS 333
GL TF + AC G G QI + K + E GC LVD G
Sbjct: 311 QGLVPDSATFVVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGC-LVDLLGRSGR 368
Query: 334 IDDGIRCFNSTP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMA 377
+++ C P K + W S + +G FE L+ +
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 232/495 (46%), Gaps = 41/495 (8%)
Query: 163 LLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMY 222
L + R G+ F + + L+AC +GK+LH +IK + S+++VG++L+ MY
Sbjct: 33 LYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMY 91
Query: 223 AKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ-----------------RQTVSC---- 261
K GC+ A VF+ N +N MI G++ R TV+
Sbjct: 92 GKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMI 151
Query: 262 -GYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
GY + +A LF M N +S ++ V R+ I +KN
Sbjct: 152 KGYGKRIEIEKARELFERMPFELKNVK--AWSVMLGVYVNNRKMEDARKFFEDIPEKN-- 207
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
FV ++ Y G + + F D+V W ++IAG +NG + A+
Sbjct: 208 --AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM 265
Query: 376 MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDI 435
G +PD +SS++ CA G ++ GI V N+ I MYAK GD+
Sbjct: 266 QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
++A F+ I V + MI C A HG EAL +F M +KP+ IT + VLTAC
Sbjct: 326 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 496 SHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVM 555
HGG + EGL+ F MK + NVKH C++ LLGR+G+L++A R + + + +
Sbjct: 386 VHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTV 444
Query: 556 WRALLGACRVHKDTMMGKHIADRVIELEPHAAASY-----VLLYNIYNDAGKEKRALEVR 610
ALLGAC+VH DT M + + ++IE SY + N+Y + + A +R
Sbjct: 445 LGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALR 503
Query: 611 KLMQDQGVKKEPGIS 625
M+ +G++K PG+S
Sbjct: 504 VEMEKRGLEKSPGLS 518
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 187/430 (43%), Gaps = 67/430 (15%)
Query: 92 LGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYV 151
LG+ +H + G+ + V +SLI+MY KC + +AR +FD E + +WN++I GY+
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 152 RLGDGF--REVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM----------- 198
GD +FE ++ + R+ + + + G K ++K+ +M
Sbjct: 124 SNGDAVLASGLFEEIS-VCRNTVTWIEMIKGYG-KRIEIEKARELFERMPFELKNVKAWS 181
Query: 199 ----LHVCAIKLD---------LNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFM 245
++V K++ N V + ++ Y + G + +A +F + +
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+NT+IAG+ Q GY+ +A+ F MQ G T SSI+ AC G GR++
Sbjct: 242 WNTLIAGYAQN-----GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
H+ I + ++ ++FV +L+D Y+ G +++ F S V SMI+ +GK
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
+ AL + + KPDE +V+ C + G L G+ F
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTAC-----------VHGGFLMEGLKIF------- 398
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
+ + Q+++ P+V + +I G EA R+ + M V KPN
Sbjct: 399 ------------SEMKTQDVK-PNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV---KPND 442
Query: 486 ITLLGVLTAC 495
L +L AC
Sbjct: 443 TVLGALLGAC 452
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 61 AFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYS 120
AF + G T + +L+ C + L +G +H + G++ FV N+LI+MY+
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 121 KCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLG 180
KC +E A +F++ NS+I+ G G +E E+ + M L + T
Sbjct: 321 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKG-KEALEMFSTMESLDLKPDEITFI 379
Query: 181 SALKAC 186
+ L AC
Sbjct: 380 AVLTAC 385
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/563 (27%), Positives = 273/563 (48%), Gaps = 32/563 (5%)
Query: 9 QPNPFIP-SKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLAFREARI 67
+P PF FP L L NP I R + +F + ++L + E R
Sbjct: 55 KPKPFRERDAFPSSLPLHSKNPY---IIHRDIQIFARQNNLEV-----ALTILDYLEQR- 105
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
G+PV+ TF+ +L C ++L G+ +H + + G++ F+ L++MY+ C ++
Sbjct: 106 -GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKD 164
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLGDG-FREVFELLARMHRSGLDFSDYTLGSALKAC 186
A+ +FD + SWN+++ G V G +++V M G+D + Y+L + K+
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSF 224
Query: 187 CVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
+L G H AIK L +++ + T+L+DMY K G + A VF+ + ++
Sbjct: 225 AGASALRQ-GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV--AIGDFRA--- 301
MIAG + EALGLF M ++ K +S++ + +GD +A
Sbjct: 284 GAMIAGLAHNKR-----QWEALGLFRTM----ISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 302 GRQIHAQICK-KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
G+++HA + K KN FV L+D Y G + G R F + + + +SWT++++G
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
NG+F+ AL + G +PD +++V+ VCA++ A + G++I +ALK +
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG 480
+ S + MY+K G + F +E +V +W+ MI C + + +F LM +S
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 481 IKPNHITLLGVLTACSHGGLVDEGLR-YFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
+P+ +T+ VLT CS + G + I+KK++ V S I+ + G+ G L
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFV--SARIIKMYGKCGDLRS 572
Query: 540 AKRFILDSGFADDPVMWRALLGA 562
A F D+ + W A++ A
Sbjct: 573 AN-FSFDAVAVKGSLTWTAIIEA 594
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 236/524 (45%), Gaps = 26/524 (4%)
Query: 41 LFDETPQRSIISCNS-------------PASLLAFREARIAGLPVSDFTFAGVLAYCGST 87
+FDE+ ++ S N+ L F E R G+ ++ ++ + V
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
LR G H + G+ +F+ SL++MY KC ++ AR +FD E D V W ++I
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD 207
AG + E L M + + + + + D +GK +H +K
Sbjct: 288 AGLAHNKRQW-EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK-- 344
Query: 208 LNSNMV----VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGY 263
+ N V V + L+D+Y K G + VF + N + +++G+ + G
Sbjct: 345 -SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGY-----AANGR 398
Query: 264 AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCS 323
+AL MQ G T ++++ C + + G++IH K + + S
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS 458
Query: 324 LVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPD 383
L+ YS G + IR F+ + +V +WT+MI VEN + + R + S +PD
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPD 518
Query: 384 EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
M V+ VC+D+ A + G+++ G LK + V I MY K GD+ SA +F
Sbjct: 519 SVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFD 578
Query: 444 EIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
+ ++W+ +I + +A+ FE M G PN T VL+ CS G VDE
Sbjct: 579 AVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDE 638
Query: 504 GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDS 547
R+F +M + Y + + +H + +++LL R GR+E+A+R + S
Sbjct: 639 AYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAVMS 682
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 33 PIRTRTLHLFDETPQRSIIS-----------CNSPASLLAFREARIAGLPVSDFTFAGVL 81
PIR LFD QR++ + C+ A + FR ++ T VL
Sbjct: 472 PIR-----LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 82 AYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDV 141
C + L+LG+ +HG +L + + FV +I MY KC + +A FD +
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGK 197
+W +II Y + FR+ +M G + +T + L C VD++
Sbjct: 587 TWTAIIEAY-GCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNL 645
Query: 198 MLHV 201
ML +
Sbjct: 646 MLRM 649
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 216/446 (48%), Gaps = 40/446 (8%)
Query: 243 DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAG 302
++ +N +I GF + +++ ++ +M GL T+ ++K+ + + + G
Sbjct: 73 NYGWNFVIRGFSNSRN-----PEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLG 127
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP----------------- 345
+H + K L+ D F+ +L+ Y F + F+ P
Sbjct: 128 GSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 187
Query: 346 --------------KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR-KPDEFIMSSV 390
+ DVV+W+SMI G V+ G++ AL + Q M G K +E M SV
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF--QEIENP 448
+ CA + A G+ + + L + +I+Q S I MYAK G I A F ++
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
D + W+ +I A HGF E+L++F M S I P+ IT L +L ACSHGGLV E +F
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF 367
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKD 568
+ +K+ G +H C+VD+L RAG ++DA FI + M ALL C H +
Sbjct: 368 KSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGN 426
Query: 569 TMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
+ + + ++IEL+PH YV L N+Y + + A +R+ M+ +GVKK G S ++
Sbjct: 427 LELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILD 486
Query: 629 VGSKVHMFLVDDRSHPMSQLIYSRLE 654
+ H F+ D++H S IY+ L+
Sbjct: 487 LDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 180/390 (46%), Gaps = 48/390 (12%)
Query: 52 SCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFV 111
S N S+ + + GL T+ ++ N +LG ++H SV+ +G++ +F+
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 112 MNSLINM-------------------------------YSKCKRIEAARVLFDTCDELDD 140
N+LI+M Y+K + +AR++FD E D
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 141 VSWNSIIAGYVRLGDGFR--EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
V+W+S+I GYV+ G+ + E+F+ + RM S + + T+ S + AC +LN GK
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN--EVTMVSVICACAHLGALN-RGKT 262
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF--ESFRYHNDFMYNTMIAGFLQR 256
+H + + L +++ T+L+DMYAK G + DA VF S + + M+N +I G
Sbjct: 263 VHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL--- 319
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
S G+ RE+L LF +M+ ++ + TF ++ AC G + + + +
Sbjct: 320 --ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Query: 317 -DEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT-SMIAGCVENGKFETALSLLRQ 374
E C +VD S G + D + P S +++ GC+ +G E A ++ ++
Sbjct: 378 KSEHYAC-MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKK 436
Query: 375 FMASGRKPD-EFI-MSSVMGVCADMAAARS 402
+ D ++ +++V + AARS
Sbjct: 437 LIELQPHNDGRYVGLANVYAINKQFRAARS 466
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 34/268 (12%)
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
G +D + + W +I G + E ++S+ Q + G PD +M
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD-- 449
+ ++ + G + +K G+ + + N+ I MY D SAR F E+ + +
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 450 -----------------------------VVSWSEMICCNAHHGFANEALRIF-ELMTVS 479
VV+WS MI G N+AL IF ++M +
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
K N +T++ V+ AC+H G ++ G + D + V T ++D+ + G + D
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYI-LDVHLPLTVILQTSLIDMYAKCGSIGD 294
Query: 540 AKRFILDSGFAD-DPVMWRALLGACRVH 566
A + + D +MW A++G H
Sbjct: 295 AWSVFYRASVKETDALMWNAIIGGLASH 322
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 204/437 (46%), Gaps = 43/437 (9%)
Query: 225 TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKF 284
T LT LV + R+ +YNT+I +L + G + +L LF M + +
Sbjct: 35 TVLLTSNALV--ASRWKTKCVYNTLIRSYL-----TTGEYKTSLALFTHMLASHVQPNNL 87
Query: 285 TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI---------- 334
TF S++KA + G +H Q K+ D FV S V FY G +
Sbjct: 88 TFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI 147
Query: 335 ---------------------DDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLR 373
D F P DVVSWT++I G + G AL +
Sbjct: 148 LNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFG 207
Query: 374 QFMASGR---KPDEFIMSSVMGVCA--DMAAARSGEQIQGWALKFGISNFIIVQNSQICM 428
+ + + R P+E SV+ CA D R G+QI G+ + I + + + M
Sbjct: 208 EMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDM 267
Query: 429 YAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
Y K+GD++ A F +I + V +W+ +I A +G +AL +FE+M S + PN ITL
Sbjct: 268 YGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSG 548
L +LTAC+ LVD G++ F + +Y I +H C+VDL+GRAG L DA FI
Sbjct: 328 LAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
Query: 549 FADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALE 608
F D + ALLGAC++H++T +G + ++I L+P YV L A +
Sbjct: 388 FEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEK 447
Query: 609 VRKLMQDQGVKKEPGIS 625
+RK M + G++K P S
Sbjct: 448 MRKAMIEAGIRKIPAYS 464
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 145/347 (41%), Gaps = 42/347 (12%)
Query: 35 RTRTLHLFDETPQRSIISCNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGE 94
R +T +++ + + + SL F + + ++ TF ++ S+ ++ G
Sbjct: 47 RWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 95 AIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD--------TCDEL-------- 138
A+HG L G FV S + Y + +E++R +FD C+ L
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 139 ---------------DDVSWNSIIAGYVRLGDGFRE--VFELLARMHRSGLDFSDYTLGS 181
D VSW ++I G+ + G + VF + + R+ + ++ T S
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 182 ALKACC-VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
L +C D+ +GK +H + ++ +GTALLDMY K G L A+ +F+ R
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
+N +I+ S G ++AL +F M+ ++ + T +I+ AC
Sbjct: 287 KKVCAWNAIISAL-----ASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVD 341
Query: 301 AGRQIHAQICK--KNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
G Q+ + IC K + E GC +VD G + D S P
Sbjct: 342 LGIQLFSSICSEYKIIPTSEHYGC-VVDLIGRAGLLVDAANFIQSLP 387
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 220/468 (47%), Gaps = 46/468 (9%)
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ 275
+L+ Y + G A VF + + +N MI G+ ++ G++ EAL L+ +M
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ-----GFSLEALKLYFKMV 224
Query: 276 MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKN--LQCDEFVGCSLVDFYSFFGS 333
G+ ++T S++ C + D R G+ +H I ++ + + +L+D Y F
Sbjct: 225 SDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMY--FKC 282
Query: 334 IDDGI--RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF---------------- 375
+ G+ R F++ K D+ SW +M+ G V G E A ++ Q
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 376 -----------------MASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
+ KPD M S++ A+ G + G ++ +
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
+ ++ I MY K G I+ A + F+ DV W+ MI A HG +AL++F M
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 479 SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLE 538
G+ PN++TLL VLTACSH GLV+EGL F MK +G +H +VDLL RAGR+E
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 539 DAKRFILDS-GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIY 597
+AK + MW ++L ACR +D + +++LEP YVLL NIY
Sbjct: 523 EAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIY 582
Query: 598 NDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFL-VDDRSHP 644
G+ + + R+ M+++GVKK G S + +H F+ + ++HP
Sbjct: 583 ATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHP 630
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 181/436 (41%), Gaps = 37/436 (8%)
Query: 94 EAIHGSVLVTGMDGM-IFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVR 152
+ IH ++V+G + ++ NSL+ Y + A +F D S+N +I GY +
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 153 LGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLD--LNS 210
G E +L +M G++ +YT+ S L CC S +GK +H + +S
Sbjct: 210 QGFSL-EALKLYFKMVSDGIEPDEYTVLSLL-VCCGHLSDIRLGKGVHGWIERRGPVYSS 267
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL---------------- 254
N+++ ALLDMY K A F++ + + +NTM+ GF+
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 255 QRQTVSC-----GYA------REALGLFCEMQML-GLNCSKFTFSSIVKACVAIGDFRAG 302
+R VS GY+ R LF EM ++ + + T S++ G+ G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN 362
R +H + + L+ D F+ +L+D Y G I+ F + + DV WTSMI G +
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFH 447
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQI-QGWALKFGISNFIIV 421
G + AL L + G P+ + +V+ C+ G + KFG
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH 507
Query: 422 QNSQICMYAKSGDIDSARLTFQE--IENPDVVSWSEMI-CCNAHHGFANEALRIFELMTV 478
S + + ++G ++ A+ Q+ P W ++ C L + EL+ +
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKL 567
Query: 479 SGIKPNHITLLGVLTA 494
K LL + A
Sbjct: 568 EPEKEGGYVLLSNIYA 583
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 170/388 (43%), Gaps = 49/388 (12%)
Query: 231 AVLVFESFRYH-NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSI 289
A L+F +F + N F+YNTMI+ + E GL+ M ++ + TF +
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAVSSSKN-------ECFGLYSSMIRHRVSPDRQTFLYL 139
Query: 290 VKACVAIGDFRAGRQIHAQICKKN-LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD 348
+KA + + + QIH I L ++ SLV FY G+ + F P D
Sbjct: 140 MKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQG 408
V S+ MI G + G AL L + ++ G +PDE+ + S++ C ++ R G+ + G
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 409 WALKFG--ISNFIIVQNSQICMYAKS-------------------------------GDI 435
W + G S+ +I+ N+ + MY K GD+
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 436 DSARLTFQEIENPDVVSWSEMICCNAHHGFANEALR--IFELMTVSGIKPNHITLLGVLT 493
++A+ F ++ D+VSW+ ++ + G +R +E+ V +KP+ +T++ +++
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
++ G + G R+ + + + S+ ++D+ + G +E A + + D
Sbjct: 377 GAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERA-FMVFKTATEKDV 434
Query: 554 VMWRALLGACRVHKDTMMGKHIADRVIE 581
+W +++ H + + R+ E
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQE 462
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 143/340 (42%), Gaps = 49/340 (14%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTG--MDGMIFVMNSLINMYSKCKRIE 126
G+ ++T +L CG ++RLG+ +HG + G + + N+L++MY KCK
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 127 AARVLFDTCDELDDVSWNSIIAGYVRLGD--GFREVFELLARMHRSGLDFSDYTLGSALK 184
A+ FD + D SWN+++ G+VRLGD + VF+ + + R + ++ G + K
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK--RDLVSWNSLLFGYSKK 344
Query: 185 AC-------------------------------CVDKSLNCIGKMLHVCAIKLDLNSNMV 213
C + G+ +H I+L L +
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF 404
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
+ +AL+DMY K G + A +VF++ + ++ +MI G G ++AL LF
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFH-----GNGQQALQLFGR 459
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCD---EFVGCSLVDFYSF 330
MQ G+ + T +++ AC G G + + K D E G SLVD
Sbjct: 460 MQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM-KDKFGFDPETEHYG-SLVDLLCR 517
Query: 331 FGSIDDGIRCFNSTPKLDVVS--WTSMIAGCVENGKFETA 368
G +++ + W S+++ C ETA
Sbjct: 518 AGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETA 557
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 41 LFDETPQRSIISCNS-------------PASLLAFREARIAGLPVSDFTFAGVLAYCGST 87
+FD+ P+R ++S NS L + + + T +++ +
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
L G +HG V+ + G F+ ++LI+MY KC IE A ++F T E D W S+I
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
G G+G ++ +L RM G+ ++ TL + L AC
Sbjct: 442 TGLAFHGNG-QQALQLFGRMQEEGVTPNNVTLLAVLTAC 479
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 303 RQIHAQICKKNLQCDEFVGCSLVDF--YSFFGSIDDGIRCF-NSTPKLDVVSWTSMIAGC 359
+Q+ AQI + NL CD F L+ F ++ ++D F N TP +V + +MI+
Sbjct: 51 KQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAV 110
Query: 360 V--ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISN 417
+N F S++R ++ R+ ++M + +++ + G L G N
Sbjct: 111 SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKAS-SFLSEVKQIHCHIIVSG-CLSLG--N 166
Query: 418 FIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT 477
++ NS + Y + G+ A F + +PDV S++ MI A GF+ EAL+++ M
Sbjct: 167 YL--WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMV 224
Query: 478 VSGIKPNHITLLGVLTACSH 497
GI+P+ T+L +L C H
Sbjct: 225 SDGIEPDEYTVLSLLVCCGH 244
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 260/568 (45%), Gaps = 52/568 (9%)
Query: 58 SLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLIN 117
+L ++ + + V T +L++ ++L + H +L TG+ F + L+
Sbjct: 20 NLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVA 79
Query: 118 MYS---KCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDF 174
+ + K + A + + + + NS+I Y EV + R G F
Sbjct: 80 FAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA--NSSTPEVALTVFREMLLGPVF 137
Query: 175 SD-YTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVL 233
D Y+ LKAC G+ +H IK L +++ V L+++Y ++G A
Sbjct: 138 PDKYSFTFVLKACAAFCGFEE-GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARK 196
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
V + + +N++++ +L++ G EA LF EM+
Sbjct: 197 VLDRMPVRDAVSWNSLLSAYLEK-----GLVDEARALFDEME------------------ 233
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
++N++ F ++ Y+ G + + F+S P DVVSW
Sbjct: 234 -----------------ERNVESWNF----MISGYAAAGLVKEAKEVFDSMPVRDVVSWN 272
Query: 354 SMIAGCVENGKFETALSLLRQFMA-SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
+M+ G + L + + + S KPD F + SV+ CA + + GE + + K
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
GI + + + MY+K G ID A F+ DV +W+ +I + HG +AL I
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEI 392
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
F M G KPN IT +GVL+AC+H G++D+ + FE+M Y + ++H C+VDLLG
Sbjct: 393 FSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVL 592
R G++E+A+ + + + ++ +LLGAC+ + IA+R++EL ++ Y
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 593 LYNIYNDAGKEKRALEVRKLMQDQGVKK 620
+ N+Y G+ ++ ++ R+ M+ + V +
Sbjct: 513 MSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 56/353 (15%)
Query: 48 RSIISCNSP-ASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMD 106
R+ + ++P +L FRE + + ++F VL C + G IHG + +G+
Sbjct: 113 RAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLV 172
Query: 107 GMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLG--DGFREVFELL 164
+FV N+L+N+Y + E AR + D D VSWNS+++ Y+ G D R +F+ +
Sbjct: 173 TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM 232
Query: 165 ARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK 224
+ +F M+ G YA
Sbjct: 233 EERNVESWNF-------------------------------------MISG------YAA 249
Query: 225 TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSK- 283
G + +A VF+S + +N M+ + G E L +F +ML + K
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH-----VGCYNEVLEVFN--KMLDDSTEKP 302
Query: 284 --FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF 341
FT S++ AC ++G G +H I K ++ + F+ +LVD YS G ID + F
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 342 NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC 394
+T K DV +W S+I+ +G + AL + + + G KP+ V+ C
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSAC 415
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 211/427 (49%), Gaps = 38/427 (8%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
VF + N ++N MI + G E+L F M+ G+ ++T++ ++K+C
Sbjct: 58 VFSHIQNPNVLVFNAMIKCY-----SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
++ D R G+ +H ++ + + +V+ Y+ G + D + F+ + +VV W
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 354 SMIAGCVENGKFETALSLLRQF-------------------------------MASGRKP 382
MI G ++G E L L +Q + G P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGI-SNFIIVQNSQICMYAKSGDIDSARLT 441
DE + +V+ + A + +G+ I A G+ +FI V N+ + Y KSGD+++A
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 442 FQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG-IKPNHITLLGVLTACSHGGL 500
F++++ +VVSW+ +I +A +G + +F+ M G + PN T LGVL CS+ G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 501 VDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALL 560
V+ G F +M + + + A +H +VDL+ R+GR+ +A +F+ + + MW +LL
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 561 GACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKK 620
ACR H D + + A ++++EP + +YVLL N+Y + G+ + +VR LM+ ++K
Sbjct: 413 SACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 621 EPGISWI 627
G S I
Sbjct: 473 STGQSTI 479
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 179/441 (40%), Gaps = 34/441 (7%)
Query: 85 GSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWN 144
G RL E IH +L + G ++ I++ + A +F + + +N
Sbjct: 13 GHNTRTRLPE-IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFN 71
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAI 204
++I Y +G E + M G+ +YT LK+C L GK +H I
Sbjct: 72 AMIKCYSLVGPPL-ESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLR-FGKCVHGELI 129
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL---------- 254
+ + + ++++Y G + DA VF+ N ++N MI GF
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 255 ------QRQTVS----------CGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
+R VS CG REAL LFCEM G + + T +++ ++G
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 299 FRAGRQIHAQICKKNLQCDEF-VGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIA 357
G+ IH+ L D VG +LVDFY G ++ F + +VVSW ++I+
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 358 GCVENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSGEQIQGWAL-KFGI 415
G NGK E + L + G+ P+E V+ C+ GE++ G + +F +
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIE-NPDVVSWSEMI-CCNAHHGFANEALRIF 473
+ + + ++SG I A + + N + W ++ C +H +
Sbjct: 370 EARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAM 429
Query: 474 ELMTVSGIKPNHITLLGVLTA 494
EL+ + + LL L A
Sbjct: 430 ELVKIEPGNSGNYVLLSNLYA 450
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 54/384 (14%)
Query: 26 FSNPVHSPIRTRTLHLFDETPQRSIISCNSPA-----SLLAFREARIAGLPVSDFTFAGV 80
++N V S I+ + +F+ ++I C S SL F + G+ ++T+A +
Sbjct: 54 YANRVFSHIQNPNVLVFN-----AMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108
Query: 81 LAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDD 140
L C S +LR G+ +HG ++ TG + + ++ +Y+ R+ A+ +FD E +
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 141 VSWNSIIAGYVRLGD---GF---------------------------REVFELLARMHRS 170
V WN +I G+ GD G RE EL M
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 171 GLDFSDYTLGSALKACCVDKSLNCI--GKMLHVCAIKLDLNSNMV-VGTALLDMYAKTGC 227
G D + T+ + L + SL + GK +H A L + + VG AL+D Y K+G
Sbjct: 229 GFDPDEATVVTVLP---ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 228 LTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LNCSKFTF 286
L A +F + N +NT+I+G + G + LF M G + ++ TF
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISG-----SAVNGKGEFGIDLFDAMIEEGKVAPNEATF 340
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKK-NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
++ C G G ++ + ++ L+ ++VD S G I + + + P
Sbjct: 341 LGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP 400
Query: 346 -KLDVVSWTSMIAGCVENGKFETA 368
+ W S+++ C +G + A
Sbjct: 401 VNANAAMWGSLLSACRSHGDVKLA 424
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFEL 475
SN ++ IC + D A F I+NP+V+ ++ MI C + G E+L F
Sbjct: 35 SNLLLAHFISIC--GSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSS 92
Query: 476 MTVSGIKPNHITLLGVLTACS-----------HGGLVDEGLRYFEIMKKDYGITANVKHS 524
M GI + T +L +CS HG L+ G + + K G
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTG--FHRLGKIRIG-------- 142
Query: 525 TCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEP 584
+V+L GR+ DA++ + D + V+W ++ D G H+ ++ E
Sbjct: 143 --VVELYTSGGRMGDAQK-VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSE--- 196
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQG 617
+ S+ + + + G+++ ALE+ M DQG
Sbjct: 197 RSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 243/517 (47%), Gaps = 25/517 (4%)
Query: 131 LFDTCDELDDVSWNSIIAGYVRLG---DGFREVFELLARMHRSGLDFSDYTLGSALKACC 187
LFD E D VSWN++I+G V G G R F++ R +F+ L S + C
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDM-QRWEIRPTEFTFSILASLVT--C 148
Query: 188 VDKSLNCIGKMLHVCAIKLDLNS-NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMY 246
V G+ +H AI ++ N+VV +++DMY + G A+ VF + + +
Sbjct: 149 VRH-----GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 247 NTMIAGFLQRQTVSC---GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGR 303
N +I +SC G AL F M+ + + ++T S +V C + + G+
Sbjct: 204 NCLI--------LSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
Q A K + V + +D +S +DD ++ F K D V SMI +
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHC 315
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
E AL L M +PD+F SSV+ + G + +K G V
Sbjct: 316 CGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF-ELMTVSGIK 482
S + MY K+G +D A F + + D++ W+ +I A + A E+L IF +L+ +K
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 483 PNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKR 542
P+ +TL+G+L AC + G V+EG++ F M+K +G+ +H CI++LL R G + +AK
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 543 FILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGK 602
F +W +L A DT + + +A ++E EP ++ Y++L IY +
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWR 554
Query: 603 EKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVD 639
+ ++++R M + +K G S I + S V F D
Sbjct: 555 WENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 156/333 (46%), Gaps = 11/333 (3%)
Query: 209 NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREAL 268
+ N + L K G L +A+ +F+ + +NTMI+G VSCG+ +
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGL-----VSCGFHEYGI 121
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ-ICKKNLQCDEFVGCSLVDF 327
+F +MQ + ++FTFS + + R G QIH IC + + V S++D
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCV---RHGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 328 YSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIM 387
Y G D + F + DVVSW +I C ++G E AL +PDE+ +
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 388 SSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN 447
S V+ +C+D+ G+Q +K G + IV + I M++K +D + F+E+E
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
D V + MI + H +ALR+F L ++P+ T VL++ + ++D G
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDHGADV 357
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
++ K G + +T ++++ + G ++ A
Sbjct: 358 HSLVIK-LGFDLDTAVATSLMEMYFKTGSVDLA 389
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 181/407 (44%), Gaps = 26/407 (6%)
Query: 14 IPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIISCNSPASLLA-----------F 62
IP K + + L LFDE P+R ++S N+ S L F
Sbjct: 65 IPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVF 124
Query: 63 REARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGM-IFVMNSLINMYSK 121
+ + + ++FTF+ + + R+ GE IHG+ + +G+ + V NS+++MY +
Sbjct: 125 FDMQRWEIRPTEFTFSILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 122 CKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREV-FELLARMHRSGLDFSDYTLG 180
+ A +F T ++ D VSWN +I G+ +EV + M + +YT+
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGN--KEVALDQFWLMREMEIQPDEYTVS 239
Query: 181 SALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
+ C + L+ + L +C IK+ SN +V A +DM++K L D+V +F
Sbjct: 240 MVVSICSDLRELSKGKQALALC-IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
+ + N+MI + CG +AL LF + KFTFSS++ + A+
Sbjct: 299 WDSVLCNSMIGSYSWH---CCG--EDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LD 352
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
G +H+ + K D V SL++ Y GS+D + F T D++ W ++I G
Sbjct: 353 HGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLA 412
Query: 361 ENGKFETALSLLRQ-FMASGRKPDEFIMSSVMGVCADMAAARSGEQI 406
N + +L++ Q M KPD + ++ C G QI
Sbjct: 413 RNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQI 459
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 30/320 (9%)
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS--IVKACVAIGDFRAGRQIHA 307
+A + Q + G+ R G C + F S ++ A D I
Sbjct: 22 LAKIVHAQLLEAGFVRTTY--------WGNRCLQLYFKSGSVINALQLFDDIPDKNTITW 73
Query: 308 QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFET 367
+C K L + G +++ + F+ P+ DVVSW +MI+G V G E
Sbjct: 74 NVCLKGLFKN--------------GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEY 119
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF-IIVQNSQI 426
+ + +P EF S + + + R GEQI G A+ G+S + ++V NS +
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSILASL---VTCVRHGEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 427 CMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHI 486
MY + G D A F +E+ DVVSW+ +I + G AL F LM I+P+
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEY 236
Query: 487 TLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD 546
T+ V++ CS + +G + + K G +N +D+ + RL+D+ + +
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 547 SGFADDPVMWRALLGACRVH 566
D V+ +++G+ H
Sbjct: 296 LE-KWDSVLCNSMIGSYSWH 314
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%)
Query: 50 IISC----NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGM 105
I+SC N +L F R + ++T + V++ C R L G+ + G
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 106 DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVR--LGDGFREVFEL 163
V+ + I+M+SKC R++ + LF ++ D V NS+I Y G+ +F L
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFIL 326
Query: 164 LARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYA 223
F+ ++ S++ A +D G +H IKL + + V T+L++MY
Sbjct: 327 AMTQSVRPDKFTFSSVLSSMNAVMLDH-----GADVHSLVIKLGFDLDTAVATSLMEMYF 381
Query: 224 KTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM-LGLNCS 282
KTG + A+ VF + +NT+I G + A E+L +F ++ M L
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR-----AVESLAIFNQLLMNQSLKPD 436
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICK 311
+ T I+ AC G G QI + + K
Sbjct: 437 RVTLMGILVACCYAGFVNEGIQIFSSMEK 465
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 206/418 (49%), Gaps = 31/418 (7%)
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFC----EMQMLGLNCSKFTFS 287
+LVF F + + F++NT++ C +++ +F + +L LN F F
Sbjct: 64 LLVFPRFGHPDKFLFNTLL---------KCSKPEDSIRIFANYASKSSLLYLNERTFVFV 114
Query: 288 -SIVKACVAIGDFRAGRQIHAQICKKN-LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP 345
+ R GR +H + K L E +G +L+ FY+ G + + F+ P
Sbjct: 115 LGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMP 174
Query: 346 KLDVVSWTSMIAGCVE-----NGKFETALSLLRQFM--ASGRKPDEFIMSSVMGVCADMA 398
+ V+W +MI G N A+ L R+F SG +P + M V+ +
Sbjct: 175 ERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTG 234
Query: 399 AARSGEQIQGWALKFGISNFI--IVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEM 456
G + G+ K G + + + + + MY+K G +++A F+ ++ +V +W+ M
Sbjct: 235 LLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSM 294
Query: 457 ICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYG 516
A +G NE + M SGIKPN IT +L+A H GLV+EG+ F+ MK +G
Sbjct: 295 ATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFG 354
Query: 517 ITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIA 576
+T ++H CIVDLLG+AGR+++A +FIL D ++ R+L AC ++ +T+MG+ I
Sbjct: 355 VTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIG 414
Query: 577 DRVIELEPH-------AAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
++E+E YV L N+ GK ++RK M+++ +K PG S++
Sbjct: 415 KALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 160/371 (43%), Gaps = 39/371 (10%)
Query: 8 SQPNPFIPSKFPFLLTLP-FSNPVHSPIRTRTLHLFDETPQRSIISCNSPAS---LLAFR 63
S+P+ SK LL P F +P D+ +++ C+ P + A
Sbjct: 51 SKPSTESSSKLAHLLVFPRFGHP-------------DKFLFNTLLKCSKPEDSIRIFANY 97
Query: 64 EARIAGLPVSDFTFAGVLAYCGSTRN---LRLGEAIHGSVLVTG-MDGMIFVMNSLINMY 119
++ + L +++ TF VL C + + LR+G +HG V G + + +L++ Y
Sbjct: 98 ASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFY 157
Query: 120 SKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGD----GFREVFELLARMH--RSGLD 173
+K + AR +FD E V+WN++I GY D R+ L R SG+
Sbjct: 158 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 174 FSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS--NMVVGTALLDMYAKTGCLTDA 231
+D T+ L A L IG ++H KL ++ +GTAL+DMY+K GCL +A
Sbjct: 218 PTDTTMVCVLSAISQTGLLE-IGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 232 VLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVK 291
VFE + N F + +M G G E L M G+ ++ TF+S++
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALN-----GRGNETPNLLNRMAESGIKPNEITFTSLLS 331
Query: 292 ACVAIGDFRAGRQIHAQICKK--NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLD 348
A IG G ++ + + E GC +VD G I + + + P K D
Sbjct: 332 AYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC-IVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 349 VVSWTSMIAGC 359
+ S+ C
Sbjct: 391 AILLRSLCNAC 401
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 173/353 (49%), Gaps = 36/353 (10%)
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALS 370
K + +V +LV Y G++ D + F+ P+ + V+W MI G G FE AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 371 LL--------------------------------RQFMASGRKPDEFIMSSVMGVCADMA 398
L R KP+E + +++ ++
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 399 AARSGEQIQGWALKFG-ISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN--PDVVSWSE 455
+ + + K G + I V NS I YAK G I SA F EI N ++VSW+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 456 MICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG-LRYFEIMKKD 514
MI A HG EA+ +F+ M G+KPN +T++ VL ACSHGGL +E L +F M +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 515 YGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKH 574
Y IT +VKH C+VD+L R GRLE+A++ L+ + V+WR LLGAC V+ D + +
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 575 IADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWI 627
+ +++ELE YVL+ NI+ G+ A RK M +GV K PG S +
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 205 KLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAG------------ 252
KL S++ V TAL+ MY G + DA VF+ N +N MI G
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 253 FLQR---------QTVSCGYAR-----EALGLFCEMQML-GLNCSKFTFSSIVKACVAIG 297
FL++ T+ GYAR EA+ LF M + ++ T +I+ A +G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 298 DFRAGRQIHAQICKKN-LQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP--KLDVVSWTS 354
D + +HA + K+ + CD V SL+D Y+ G I + F P + ++VSWT+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCA 395
MI+ +G + A+S+ + G KP+ M SV+ C+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS 371
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 140/354 (39%), Gaps = 58/354 (16%)
Query: 104 GMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFEL 163
G + ++V +L+ MY + A +FD E + V+WN +I G LGD F +
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGD-FEKALCF 211
Query: 164 LARM-HRSGLDFSDYTLGSALKACCVDKSLNCI---GKMLHVCAIKLD------------ 207
L +M +R+ + ++ G A VDK I +M+ AIK +
Sbjct: 212 LEKMPNRTVVSWTTIIDGYAR----VDKPKEAILLFSRMVACDAIKPNEITILAILPAVW 267
Query: 208 --------------------LNSNMVVGTALLDMYAKTGCLTDAVLVFESFR--YHNDFM 245
+ ++ V +L+D YAK GC+ A F N
Sbjct: 268 NLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVS 327
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACV--AIGDFRAGR 303
+ TMI+ F G +EA+ +F +M+ LGL ++ T S++ AC + +
Sbjct: 328 WTTMISAFAIH-----GMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLE 382
Query: 304 QIHAQICKKNLQCD-EFVGCSLVDFYSFFGSIDDGIRCFNSTP-KLDVVSWTSMIAGCVE 361
+ + + + D + GC LVD G +++ + P + V W ++ C
Sbjct: 383 FFNTMVNEYKITPDVKHYGC-LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSV 441
Query: 362 NGKFETALSLLRQFMASGRKP--DEFIMSSVM---GVCADMAAARSGEQIQGWA 410
E A + R+ M R D +MS++ G D R ++G A
Sbjct: 442 YDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVA 495
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 196/441 (44%), Gaps = 42/441 (9%)
Query: 223 AKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCS 282
A ++ A VF + F +NT+I + S R F EM+ +
Sbjct: 59 ASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKR----FFVEMRRRSVPPD 114
Query: 283 KFTFSSIVKACVAI--GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRC 340
TF + KAC A GD + +H Q + L D F +L+ YS ID ++
Sbjct: 115 FHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQL 174
Query: 341 FNSTPKLDVV-------------------------------SWTSMIAGCVENGKFETAL 369
F+ P+ DVV SW S+I+G + A+
Sbjct: 175 FDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
Query: 370 SLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY 429
L + +A G KPD + S + CA + G+ I + + + + + Y
Sbjct: 235 KLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
Query: 430 AKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
AK G ID+A F+ + + +W+ MI A HG + F M SGIKP+ +T +
Sbjct: 295 AKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI 354
Query: 490 GVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI----L 545
VL CSH GLVDE F+ M+ Y + +KH C+ DLLGRAG +E+A I
Sbjct: 355 SVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPK 414
Query: 546 DSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKR 605
D G + + W LLG CR+H + + + A+RV L P Y ++ +Y +A + +
Sbjct: 415 DGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEE 474
Query: 606 ALEVRKLM-QDQGVKKEPGIS 625
++VR+++ +D+ VKK G S
Sbjct: 475 VVKVREIIDRDKKVKKNVGFS 495
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 27/260 (10%)
Query: 163 LLARMHRSGLDFSDYTLGSALKACCVDKSLN-CIGKMLHVCAIKLDLNSNMVVGTALLDM 221
M R + +T KAC K+ + + K LH A++ L S++ L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 222 YAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ----------------RQTVS----- 260
Y+ + A+ +F+ + YN +I G ++ R VS
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 261 CGYA-----REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
GYA REA+ LF EM LGL S + AC GD++ G+ IH +K L
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 316 CDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQF 375
D F+ LVDFY+ G ID + F + +W +MI G +G E + R+
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 376 MASGRKPDEFIMSSVMGVCA 395
++SG KPD SV+ C+
Sbjct: 342 VSSGIKPDGVTFISVLVGCS 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 146/363 (40%), Gaps = 53/363 (14%)
Query: 50 IISCNSPASLLA---FREARIAGLPVSDFTFAGVLAYCGSTRN--LRLGEAIHGSVLVTG 104
I + + P+SL + F E R +P TF V C + +N L L + +H L G
Sbjct: 88 ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFG 147
Query: 105 MDGMIFVMNSLINMYS-------------------------------KCKRIEAARVLFD 133
+ +F +N+LI +YS K + I AR LFD
Sbjct: 148 LLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFD 207
Query: 134 TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN 193
+ D VSWNS+I+GY ++ + RE +L M GL + + S L AC
Sbjct: 208 SMPLRDLVSWNSLISGYAQM-NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQ 266
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGF 253
GK +H + L + + T L+D YAK G + A+ +FE F +N MI G
Sbjct: 267 -KGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGL 325
Query: 254 LQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ---IC 310
G + F +M G+ TF S++ C G R + Q +
Sbjct: 326 AMH-----GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLY 380
Query: 311 KKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK-----LDVVSWTSMIAGCVENGKF 365
N + + GC + D G I++ PK +++W+ ++ GC +G
Sbjct: 381 DVNREMKHY-GC-MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNI 438
Query: 366 ETA 368
E A
Sbjct: 439 EIA 441
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 234/519 (45%), Gaps = 41/519 (7%)
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI-GK 197
D SW ++ ++ F+E ++ MH SG+ S + + S L+AC K N + GK
Sbjct: 68 DSFSWGCLVR-FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRAC--GKMENMVDGK 124
Query: 198 MLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ-- 255
+H A+K L + V T L+ +Y++ G + A F+ N +N+++ G+L+
Sbjct: 125 PIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESG 184
Query: 256 --------------RQTVS-----CGYARE-----ALGLFCEMQMLGLNCSKFTFSSIVK 291
+ VS YA++ A LF M + S +++ ++
Sbjct: 185 ELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK----SPASWNILIG 240
Query: 292 ACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS 351
V + + R + +KN +++ Y+ G + F K D +
Sbjct: 241 GYVNCREMKLARTYFDAMPQKN----GVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 352 WTSMIAGCVENGKFETALSLLRQFMASGR--KPDEFIMSSVMGVCADMAAARSGEQIQGW 409
+ +MIA +NGK + AL L Q + +PDE +SSV+ + + G ++ +
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEA 469
+ GI ++ S I +Y K GD A F + D VS+S MI +G A EA
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 470 LRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVD 529
+F M I PN +T G+L+A SH GLV EG + F M KD+ + + H +VD
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVD 475
Query: 530 LLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAAS 589
+LGRAGRLE+A I + +W ALL A +H + G+ ++LE
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGY 535
Query: 590 YVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIE 628
L IY+ G+ A VR ++++ + K G SW+E
Sbjct: 536 LSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 149/361 (41%), Gaps = 32/361 (8%)
Query: 68 AGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
+G+P S VL CG N+ G+ IH L G+ G ++V L+ +YS+ IE
Sbjct: 98 SGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIEL 157
Query: 128 ARVLFDTCDELDDVSWNSIIAGYVRLG--DGFREVFELLARMHRSGLDF--SDYTLGSAL 183
A+ FD E + VSWNS++ GY+ G D R VF+ + + S Y +
Sbjct: 158 AKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDM 217
Query: 184 KACC-----------------VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
C + +NC L N V ++ Y K G
Sbjct: 218 GNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLG 277
Query: 227 CLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNC----S 282
+ A +F + +Y+ MIA + Q G ++AL LF QML N
Sbjct: 278 DVQSAEELFRLMSKKDKLVYDAMIACYTQN-----GKPKDALKLFA--QMLERNSYIQPD 330
Query: 283 KFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFN 342
+ T SS+V A +G+ G + + I + ++ D+ + SL+D Y G + F+
Sbjct: 331 EITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS 390
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARS 402
+ K D VS+++MI GC NG A SL + P+ + ++ + +
Sbjct: 391 NLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQE 450
Query: 403 G 403
G
Sbjct: 451 G 451
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 177/416 (42%), Gaps = 37/416 (8%)
Query: 234 VFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
+ + F H+ F + ++ Q + +E + ++ +M G+ S +S+++AC
Sbjct: 60 ILKGFNGHDSFSWGCLVRFLSQHRKF-----KETVDVYIDMHNSGIPPSSHAVTSVLRAC 114
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWT 353
+ + G+ IHAQ K L +V LV YS G I+ + F+ + + VSW
Sbjct: 115 GKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWN 174
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV-----MGVCADMAAARSGEQIQG 408
S++ G +E+G+ + A + + I+SS MG + +A +
Sbjct: 175 SLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPAS 234
Query: 409 W-----------ALKFGISNFIIVQN-------SQICMYAKSGDIDSARLTFQEIENPDV 450
W +K + F + + I Y K GD+ SA F+ + D
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 451 VSWSEMICCNAHHGFANEALRIFELMTV--SGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
+ + MI C +G +AL++F M S I+P+ ITL V++A S G G +
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWV 353
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGF-ADDPVMWRALLGACRVHK 567
E ++GI + ST ++DL + G AK F + S D V + A++ C ++
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDF--AKAFKMFSNLNKKDTVSYSAMIMGCGING 411
Query: 568 DTMMGKHIADRVIELE-PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEP 622
+ +IE + P ++ L + Y+ +G + + M+D + EP
Sbjct: 412 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL--EP 465
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 184/389 (47%), Gaps = 41/389 (10%)
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
+ + G PD + CA++ + +++ L+ + N I M+ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 434 DIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLT 493
I A+ F + + D+ SW M+C + +G ++AL +FE MT G+KPN T L V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDP 553
AC+ G ++E +F+ MK ++GI+ +H ++ +LG+ G L +A+++I D F
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 554 VMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLL------YNIYNDAGKEKRAL 607
W A+ R+H D + ++ + +++++P A + + N + R L
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRIL 465
Query: 608 EVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGD 667
E R L + K E+ +K + V D + + E+ L+
Sbjct: 466 EFRNLTFYKDEAK-------EMAAKKGVVYVPDTRFVLHDIDQEAKEQALL--------- 509
Query: 668 EKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLIS 727
+HSE+LA+ +GII P + +IKNLRVC DCH +K++S
Sbjct: 510 -------------------YHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMS 550
Query: 728 KLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K+ R +I+RD RFHHFK+G CSC DYW
Sbjct: 551 KIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 38/406 (9%)
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF--VGC 322
++ALG + ++ G +TF S++ +G+ H Q K CD+ V
Sbjct: 100 KQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG--CDQVLPVQN 157
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA-------------- 368
SL+ Y+ G++D + F PK D+VSW S+IAG V NG A
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 369 -----------------LSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWAL 411
+SL R+ + +G + +E + ++ C A + G + +
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 412 KFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALR 471
+ +++ +++ + I MY K ++ AR F + + V+W+ MI + HG L
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
+FE M ++P+ +T +GVL C+ GLV +G Y+ +M ++ I N H C+ +L
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 532 GRAG---RLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAA 588
AG E+A + + D + W LL + R + +G+ IA +IE +P
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYK 457
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVH 634
Y LL NIY+ G+ + VR++++++ + + PG +++ VH
Sbjct: 458 YYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 143/358 (39%), Gaps = 54/358 (15%)
Query: 48 RSIISCNSPASLLAFR--EARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGM 105
++ + +SP L F R +P S +TF +++ T + G+ HG + G
Sbjct: 91 KAYLVSSSPKQALGFYFDILRFGFVPDS-YTFVSLISCIEKTCCVDSGKMCHGQAIKHGC 149
Query: 106 DGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSI------------------- 146
D ++ V NSL++MY+ C ++ A+ LF + D VSWNSI
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 147 ------------IAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNC 194
I+ Y+ + + L M R+G ++ TL L AC L
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSI-SLFREMVRAGFQGNESTLVLLLNACGRSARLK- 267
Query: 195 IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFL 254
G+ +H I+ LNS++V+ TAL+DMY K + A +F+S N +N MI
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
G L LF M L + TF ++ C G G+ ++ L
Sbjct: 328 LH-----GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS------L 376
Query: 315 QCDEFV-------GCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKF 365
DEF + + YS G ++ + P DV ++ A + + +F
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRF 434
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 13/137 (9%)
Query: 41 LFDETPQRSIIS----------CNSPA-SLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
LFDE P ++IIS N+P S+ FRE AG ++ T +L CG +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L+ G ++H S++ T ++ + + +LI+MY KCK + AR +FD+ + V+WN +I
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 150 YVRLG--DGFREVFELL 164
+ G +G E+FE +
Sbjct: 326 HCLHGRPEGGLELFEAM 342
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 128/336 (38%), Gaps = 50/336 (14%)
Query: 169 RSGLDFSDYTLGSAL----KACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK 224
R G YT S + K CCVD GKM H AIK + + V +L+ MY
Sbjct: 111 RFGFVPDSYTFVSLISCIEKTCCVDS-----GKMCHGQAIKHGCDQVLPVQNSLMHMYTC 165
Query: 225 TGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGY--------------------- 263
G L A +F + +N++IAG ++ V +
Sbjct: 166 CGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAY 225
Query: 264 -----AREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDE 318
++ LF EM G ++ T ++ AC + GR +HA + + L
Sbjct: 226 LGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSV 285
Query: 319 FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS 378
+ +L+D Y + R F+S + V+W MI +G+ E L L +
Sbjct: 286 VIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMING 345
Query: 379 GRKPDEFIMSSVMGVCADMAAARSGEQIQGWA-LKFGISNFIIVQN--SQICM---YAKS 432
+PDE V+ C AR+G QG + + F I N Q CM Y+ +
Sbjct: 346 MLRPDEVTFVGVLCGC-----ARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 433 GDIDSARLTFQEIENPDV----VSWSEMICCNAHHG 464
G + A + + + DV W+ ++ + G
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 116/294 (39%), Gaps = 35/294 (11%)
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENG 363
Q+HA++ D L+ S FG + + S KL + + + +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCAN--PVFKAYLVSS 97
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
+ AL + G PD + S++ SG+ G A+K G + VQN
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC------------------------- 458
S + MY G +D A+ F EI D+VSW+ +I
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 459 ----CNAHHGFANEALRI--FELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMK 512
+A+ G N + I F M +G + N TL+ +L AC + EG +
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 513 KDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVH 566
+ + + ++V T ++D+ G+ + A+R I DS + V W ++ A +H
Sbjct: 278 RTF-LNSSVVIDTALIDMYGKCKEVGLARR-IFDSLSIRNKVTWNVMILAHCLH 329
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 198/401 (49%), Gaps = 30/401 (7%)
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW-ALKFGISNFIIV 421
GK + A+ +++ + G D + + +C D A + + + + GIS+ I
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISD-ISA 218
Query: 422 QNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
NS I MY+ G ++ A F + ++ +W +I C A +G +A+ F G
Sbjct: 219 YNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 278
Query: 482 KPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
KP+ + AC G ++EGL +FE M K+YGI ++H +V +L G L++A
Sbjct: 279 KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 338
Query: 542 RFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAG 601
RF+ + +W L+ RVH D ++G D V +L+ AS + N + AG
Sbjct: 339 RFV--ESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD----ASRL---NKESKAG 389
Query: 602 --KEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIY---SRLEEM 656
K + V++ +Q GI ++ G D S P ++ +Y L+E
Sbjct: 390 LVPVKSSDLVKEKLQRMAKGPNYGIRYMAAG---------DISRPENRELYMALKSLKEH 440
Query: 657 LVKINKIEFGDEKL-PMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRV 715
+++I + L +D + N + +H+E+ A + P + +RV+KNLRV
Sbjct: 441 MIEIGYVPLSKLALHDVDQESKDEN----LFNHNERFAFISTFLDTPARSLIRVMKNLRV 496
Query: 716 CSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
C+DCH +KL+SK+ R++I RDA RFHH K+G+CSC++YW
Sbjct: 497 CADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
S+++ YS GS++D + FNS P+ ++ +W +I +NG+ E A+ +F G KP
Sbjct: 221 SIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP 280
Query: 383 DEFIMSSVMGVCADMAAARSG-EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
D + + C + G + ++GI + S + M A+ G +D A L
Sbjct: 281 DGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA-LR 339
Query: 442 FQEIENPDVVSWSEMICCNAHHG 464
F E P+V W ++ + HG
Sbjct: 340 FVESMEPNVDLWETLMNLSRVHG 362
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 180/382 (47%), Gaps = 40/382 (10%)
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQR 256
K +H IK +L ++ ++ L+ + + G A LVF + + F +N MI
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMI------ 90
Query: 257 QTVSCGY-AREALGLFCEMQMLGLN-CSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
+++S + REAL LF M + + KFTF ++KAC+A R G Q+H K
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF 150
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCF-------------------------------NS 343
D F +L+D Y G D G + F N
Sbjct: 151 FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQ 210
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
P +VVSWT+MI V+N + + A L R+ KP+EF + +++ + + G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHH 463
+ +A K G + + I MY+K G + AR F ++ + +W+ MI H
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVH 330
Query: 464 GFANEALRIF-ELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVK 522
G EAL +F E+ + ++P+ IT +GVL+AC++ G V +GLRYF M + YGI+ +
Sbjct: 331 GCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIRE 390
Query: 523 HSTCIVDLLGRAGRLEDAKRFI 544
H+ C++ LL +A +E A +
Sbjct: 391 HNACMIQLLEQALEVEKASNLV 412
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 37/312 (11%)
Query: 287 SSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK 346
S ++ C +F +QIH +I K NL D+ + L+ S FG FN
Sbjct: 24 SYFLRTC---SNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 347 LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP-DEFIMSSVMGVCADMAAARSGEQ 405
+W MI N K AL L M S + D+F V+ C ++ R G Q
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSG-------------------------------D 434
+ G A+K G N + QN+ + +Y K G
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 435 IDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA 494
+DSA + F ++ +VVSW+ MI + +EA ++F M V +KPN T++ +L A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 495 CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPV 554
+ G + G R+ G + T ++D+ + G L+DA++ + D
Sbjct: 261 STQLGSLSMG-RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARK-VFDVMQGKSLA 318
Query: 555 MWRALLGACRVH 566
W +++ + VH
Sbjct: 319 TWNSMITSLGVH 330
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 142/345 (41%), Gaps = 34/345 (9%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIA 148
N + IH ++ + ++ LI++ S + A ++F+ +WN +I
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIR 91
Query: 149 GYVRLGDGFRE---VFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIK 205
+ + RE +F L+ H+S D +T +KAC S+ +G +H AIK
Sbjct: 92 S-LSVNHKPREALLLFILMMISHQSQFD--KFTFPFVIKACLASSSIR-LGTQVHGLAIK 147
Query: 206 LDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQ---------- 255
+++ L+D+Y K G VF+ + + TM+ G +
Sbjct: 148 AGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIV 207
Query: 256 ------RQTVS-----CGYAR-----EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF 299
R VS Y + EA LF MQ+ + ++FT ++++A +G
Sbjct: 208 FNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSL 267
Query: 300 RAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGC 359
GR +H K D F+G +L+D YS GS+ D + F+ + +W SMI
Sbjct: 268 SMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSL 327
Query: 360 VENGKFETALSLLRQFMASGR-KPDEFIMSSVMGVCADMAAARSG 403
+G E ALSL + +PD V+ CA+ + G
Sbjct: 328 GVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 72/345 (20%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFD- 133
FTF V+ C ++ ++RLG +HG + G +F N+L+++Y KC + ++ R +FD
Sbjct: 120 FTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDK 179
Query: 134 -----------------TCDELDD-------------VSWNSIIAGYV--RLGDGFREVF 161
+ +LD VSW ++I YV R D E F
Sbjct: 180 MPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPD---EAF 236
Query: 162 ELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDM 221
+L RM + +++T+ + L+A SL+ +G+ +H A K + +GTAL+DM
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLS-MGRWVHDYAHKNGFVLDCFLGTALIDM 295
Query: 222 YAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG-LN 280
Y+K G L DA VF+ + + +N+MI CG EAL LF EM+ +
Sbjct: 296 YSKCGSLQDARKVFDVMQGKSLATWNSMITSL---GVHGCG--EEALSLFEEMEEEASVE 350
Query: 281 CSKFTFSSIVKACVAIGDFRAG-----RQIHA--------------QICKKNLQCDEFVG 321
TF ++ AC G+ + G R I Q+ ++ L+ ++
Sbjct: 351 PDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEK--A 408
Query: 322 CSLV-------DFYSFFGS-IDDGIRCFNSTPKLDVVSWTSMIAG 358
+LV DF S FG+ DG+ N TP + +T G
Sbjct: 409 SNLVESMDSDPDFNSSFGNEYTDGMNETNETPSQHQIMFTKWDTG 453
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 41 LFDETPQRSIISCNS-----------PASLLAFREARIAGLPVSDFTFAGVLAYCGSTRN 89
+F++ P R+++S + + FR ++ + ++FT +L +
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 90 LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSIIAG 149
L +G +H G F+ +LI+MYSKC ++ AR +FD +WNS+I
Sbjct: 267 LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITS 326
Query: 150 YVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAI 204
G G + + ++ T L AC V L +M+ V I
Sbjct: 327 LGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 178/372 (47%), Gaps = 27/372 (7%)
Query: 393 VCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC-MYAKSGDIDSARLTFQEIENPDVV 451
+C + + + + G + +S+ + N + MY+ G + A F+++ ++
Sbjct: 263 ICGEAEGLQEAKTVHG-KISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 452 SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIM 511
+W +I C A +GF +A+ +F G P+ G+ AC G VDEGL +FE M
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 512 KKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMM 571
+DYGI +++ +V++ G L++A F+ + +W L+ RVH + +
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 572 GKHIADRVIELEPHAAASYVLLYNIYNDAGKEK----RALEVRKLMQDQGVKKEPGISWI 627
G + A+ V L+P N +E +A +V K + +KK GI
Sbjct: 442 GDYCAEVVEFLDPTR----------LNKQSREGFIPVKASDVEK----ESLKKRSGI-LH 486
Query: 628 EVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFG---DEKLPMDISGTELNGIVG 684
V S + F D + P + ++ L + K++ +E G + ++ + E +
Sbjct: 487 GVKSSMQEFRAGDTNLPENDELFQLLRNL--KMHMVEVGYVAETRMALHDIDQESKETLL 544
Query: 685 MSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHH 744
+ HSE++A +++ P VIKNLRVC DCH +K++S + R++I RD RFH
Sbjct: 545 LG-HSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQ 603
Query: 745 FKEGLCSCKDYW 756
K G C+CKDYW
Sbjct: 604 MKNGACTCKDYW 615
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 202/477 (42%), Gaps = 84/477 (17%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
G+ F+F V+ G R G V G +V N +++MY K + +E+A
Sbjct: 101 GIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESA 155
Query: 129 RVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCV 188
R +FD + WN +I+GY + G+ +AC
Sbjct: 156 RKVFDQISQRKGSDWNVMISGY--------------------------WKWGNKEEAC-- 187
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNT 248
K+ + +++V T ++ +AK L +A F+ + +N
Sbjct: 188 --------KLFDMMP-----ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
M++G+ Q G+ +AL LF +M LG+ ++ T+ ++ AC D R +
Sbjct: 235 MLSGYAQN-----GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKL 289
Query: 309 ICKKNLQCDEFVGCSLVDF--------------------------------YSFFGSIDD 336
I +K ++ + FV +L+D Y+ G +
Sbjct: 290 IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSS 349
Query: 337 GIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASG-RKPDEFIMSSVMGVCA 395
+ F++ PK +VVSW S+IAG NG+ A+ + G KPDE M SV+ C
Sbjct: 350 ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACG 409
Query: 396 DMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSE 455
MA G+ I + K I S I MYA+ G++ A+ F E++ DVVS++
Sbjct: 410 HMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNT 469
Query: 456 MICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMK 512
+ A +G E L + M GI+P+ +T VLTAC+ GL+ EG R F+ ++
Sbjct: 470 LFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 211/509 (41%), Gaps = 68/509 (13%)
Query: 122 CKRIEA----ARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
C R+ A R++FD+ + NS+ + ++ D +V L + R G+
Sbjct: 49 CTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKM-DMANDVLRLYEQRSRCGI----- 102
Query: 178 TLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
+ A V KS G + KL + V ++DMY K + A VF+
Sbjct: 103 -MPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQ 161
Query: 238 FRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIG 297
+N MI+G+ + G EA LF M+ N +++ ++ +
Sbjct: 162 ISQRKGSDWNVMISGYWK-----WGNKEEACKLF---DMMPEN-DVVSWTVMITGFAKVK 212
Query: 298 DFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV----VSWT 353
D R+ ++ +K++ +++ Y+ G +D +R FN +L V +W
Sbjct: 213 DLENARKYFDRMPEKSVVS----WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 354 SMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKF 413
+I+ C SL++ + + F+ ++++ + A +S +I +
Sbjct: 269 IVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN---EL 325
Query: 414 GISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIF 473
G ++ N+ I Y + GD+ SAR F + +VVSW+ +I AH+G A A+ F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 474 ELMTVSG-IKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLG 532
E M G KP+ +T++ VL+AC H A+++ CIVD +
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGH--------------------MADLELGDCIVDYI- 424
Query: 533 RAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVL 592
R +++ + DSG+ R+L+ + K + D E++ SY
Sbjct: 425 RKNQIK-----LNDSGY-------RSLIFMYARGGNLWEAKRVFD---EMKERDVVSYNT 469
Query: 593 LYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
L+ + G L + M+D+G++ +
Sbjct: 470 LFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 156/400 (39%), Gaps = 55/400 (13%)
Query: 233 LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
L+F+S + N F+ N+M F + A + L L+ + G+ F+F ++K+
Sbjct: 61 LIFDSVTFPNVFVVNSMFKYFSKMDM-----ANDVLRLYEQRSRCGIMPDAFSFPVVIKS 115
Query: 293 CVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSW 352
R G A + K D +V ++D Y S++ + F+ + W
Sbjct: 116 AG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
MI+G + G E A L DM
Sbjct: 171 NVMISGYWKWGNKEEACKLF-----------------------DMMP------------- 194
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRI 472
N ++ I +AK D+++AR F + VVSW+ M+ A +GF +ALR+
Sbjct: 195 ---ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRL 251
Query: 473 FELMTVSGIKPNHITLLGVLTACSHGGLVDEGL-RYFEIMKKDYGITANVKHSTCIVDLL 531
F M G++PN T + V++ACS D L R + + + N T ++D+
Sbjct: 252 FNDMLRLGVRPNETTWVIVISACSFRA--DPSLTRSLVKLIDEKRVRLNCFVKTALLDMH 309
Query: 532 GRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYV 591
+ ++ A+R + G + V W A++ D + + D + S+
Sbjct: 310 AKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFD---TMPKRNVVSWN 366
Query: 592 LLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGS 631
L Y G+ A+E + M D G K ++ I V S
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 145/314 (46%), Gaps = 55/314 (17%)
Query: 42 FDETPQRSIISCNSPAS-----------LLAFREARIAGLPVSDFTFAGVLAYCGSTRNL 90
FD P++S++S N+ S L F + G+ ++ T+ V++ C +
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 91 RLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTC-DELDDVSWNSIIAG 149
L ++ + + FV +L++M++KC+ I++AR +F+ + + V+WN++I+G
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 150 YVRLGD--GFREVFE------------LLARMHRSG------------LDFSD-----YT 178
Y R+GD R++F+ L+A +G +D+ D T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 179 LGSALKAC--CVDKSL-NCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
+ S L AC D L +CI + IKL+ + +L+ MYA+ G L +A VF
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY----RSLIFMYARGGNLWEAKRVF 456
Query: 236 ESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVA 295
+ + + YNT+ F + G E L L +M+ G+ + T++S++ AC
Sbjct: 457 DEMKERDVVSYNTLFTAF-----AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNR 511
Query: 296 IGDFRAGRQIHAQI 309
G + G++I I
Sbjct: 512 AGLLKEGQRIFKSI 525
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 40 HLFDETPQRSIISCNS----------PASLLAFREARI--AGLPVSDFTFAGVLAYCGST 87
LFD P+R+++S NS A + F E I + T VL+ CG
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 88 RNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDELDDVSWNSII 147
+L LG+ I + + SLI MY++ + A+ +FD E D VS+N++
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLF 471
Query: 148 AGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKAC 186
+ GDG E LL++M G++ T S L AC
Sbjct: 472 TAFAANGDGV-ETLNLLSKMKDEGIEPDRVTYTSVLTAC 509
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 17/334 (5%)
Query: 426 ICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
I MY+ D A F E+ + +W MI C A +G A+ +F G KP+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDK 209
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL 545
V AC G ++EGL +FE M +DYG+ +++ ++++L G L++A F+
Sbjct: 210 EIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVE 269
Query: 546 DSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPH---AAASYVLLYNIYNDAGK 602
MW L+ C V +G A+ + +L+ ++ L+ +D+
Sbjct: 270 RMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAM 329
Query: 603 EKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINK 662
EK +++L Q ++ +P ++H F D SH + S + V++
Sbjct: 330 EK----LKELRYCQMIRDDPK-------KRMHEFRAGDTSHLGT---VSAFRSLKVQMLD 375
Query: 663 IEFGDEKLPMDISGTELNGIVGMSHHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVT 722
I F ++ E + S KLA II+ P+ V++N+R C D H T
Sbjct: 376 IGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNT 435
Query: 723 MKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
K+IS + R +I RD ++H +K G+CSCKDYW
Sbjct: 436 FKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 323 SLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
++++ YS S DD + FN PK + +W +MI +NG+ E A+ + +F+ G KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 383 DEFIMSSVMGVCADMAAARSG-----EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
D+ I +V C + G + + + + +++ V I M A G +D
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNV----IEMLAACGHLDE 263
Query: 438 ARLTFQE--IENPDVVSWSEMICCNAHHGFANEALRIFELM-TVSGIKPNHITLLGVLTA 494
A L F E P V W ++ G+ R EL+ + + + + G++ A
Sbjct: 264 A-LDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAA 322
Query: 495 CSHGGLVD--EGLRYFEIMKKD 514
+ ++ + LRY ++++ D
Sbjct: 323 KASDSAMEKLKELRYCQMIRDD 344
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 178/404 (44%), Gaps = 29/404 (7%)
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
C++ G + A+ +L G D + + +C A + + +
Sbjct: 95 CIQ-GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCD 153
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
+ +N+ I MY+ +D A F+E+ + + M+ C ++G+ EA+ +F
Sbjct: 154 VGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKE 213
Query: 479 SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLE 538
G KPN V + C+ G V EG F+ M ++YGI +++H + +L +G L+
Sbjct: 214 EGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLD 273
Query: 539 DAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAAASYVLLYNIYN 598
+A F+ +W L+ RVH D +G A+ V +L+ L + +
Sbjct: 274 EALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA------TRLDKVSS 327
Query: 599 DAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLV 658
+A + K ++ + EP F D SHP +IY L +
Sbjct: 328 AGLVATKASDFVK--KEPSTRSEPYF--------YSTFRPVDSSHPQMNIIYETLMSLRS 377
Query: 659 KINKIEFGDE-----KLPMDISGTELNGIVGMSHHSEKLAVTFGII-SLPKSAPVRVIKN 712
++ ++ + + L M + E I G + E++AV ++ S P+SA + ++ N
Sbjct: 378 QLKEMGYVPDTRYYRSLIMAMENKE--QIFG---YREEIAVVESLLKSKPRSA-ITLLTN 431
Query: 713 LRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFKEGLCSCKDYW 756
+R+ DCH MKL+S + R +I RDA +H FK G+C C + W
Sbjct: 432 IRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G REA+ + ++ G + K C A R +H I CD
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
++++ YS S+DD ++ F P+ + + M+ V NG E A+ L +F G K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 382 PDEFIMSSVMGVCADMAAARSGE-QIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL 440
P+ I + V C + G Q Q ++GI + +S M A SG +D A L
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA-L 276
Query: 441 TFQE--IENPDVVSWSEMICCNAHHGFANEALRIFELM 476
F E P V W ++ + HG R EL+
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELV 314
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 13/326 (3%)
Query: 70 LPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR 129
LP ++ ++ + + R + ++ + + I +N L+ M+ C R++ R
Sbjct: 84 LPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITR 143
Query: 130 VLFDTCDELDDVSWNSIIAGYVRLGDGFREVF---ELLARMHRSGLDFSDYTLGSALKAC 186
+FD D SW + G + +GD F +L + + LG LKAC
Sbjct: 144 QMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKAC 203
Query: 187 CVDKSLNCIGKMLHVCAIKLDL--NSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDF 244
+ + +GK +H KL + + +L+ Y + CL DA LV N
Sbjct: 204 AMIRDFE-LGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTV 262
Query: 245 MYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD-FRAGR 303
+ + + G +E + F EM G+ + FS+++KAC + D R+G+
Sbjct: 263 AWAAKVTNDYRE-----GEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQ 317
Query: 304 QIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS-WTSMIAGCVEN 362
Q+HA K + D + C L++ Y +G + D + F S+ VS W +M+A ++N
Sbjct: 318 QVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQN 377
Query: 363 GKFETALSLLRQFMASGRKPDEFIMS 388
G + A+ LL Q A+G K + +++
Sbjct: 378 GIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 16/301 (5%)
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
L V +K + + LL M+ G L +F+ H DF ++ FL
Sbjct: 110 LQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMP-HRDFHSWAIV--FLG--C 164
Query: 259 VSCGYAREALGLFCEM----QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
+ G +A LF M Q + ++KAC I DF G+Q+HA +C K
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHA-LCHKLG 223
Query: 315 QCDE---FVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSL 371
DE ++ SL+ FY F ++D + + V+W + + G+F+ +
Sbjct: 224 FIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRD 283
Query: 372 LRQFMASGRKPDEFIMSSVMGVCADMA-AARSGEQIQGWALKFGISNFIIVQNSQICMYA 430
+ G K + + S+V+ C+ ++ RSG+Q+ A+K G + +++ I MY
Sbjct: 284 FIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYG 343
Query: 431 KSGDIDSARLTFQEIENPDVVS-WSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
K G + A F+ ++ VS W+ M+ +G EA+++ M +GIK H TLL
Sbjct: 344 KYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA-HDTLL 402
Query: 490 G 490
Sbjct: 403 N 403
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 18/301 (5%)
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M L L ++ +S + K D R ++ I K +++ L+ + G
Sbjct: 79 MDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGR 138
Query: 334 IDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETA----LSLLRQFMASGRKPDEFIMSS 389
+D + F+ P D SW + GC+E G +E A +S+L+ K +I+
Sbjct: 139 LDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGC 198
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ-----ICMYAKSGDIDSARLTFQE 444
V+ CA + G+Q+ K G FI ++S I Y + ++ A L +
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLG---FIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQ 255
Query: 445 IENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEG 504
+ N + V+W+ + + G E +R F M GIK N VL ACS V +G
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS---WVSDG 312
Query: 505 LRYFEIMKKD---YGITANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLG 561
R + + + G ++ ++++ G+ G+++DA++ S W A++
Sbjct: 313 GRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVA 372
Query: 562 A 562
+
Sbjct: 373 S 373
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 220/507 (43%), Gaps = 38/507 (7%)
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH 200
V++ ++I G+ + G+ R F+L M + G++ D S L + +G L
Sbjct: 287 VTFCTLINGFCKRGEMDR-AFDLFKVMEQRGIE-PDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQR 256
A+ + ++VV ++ +D+Y K+G L A +V++ N Y +I G Q
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G EA G++ ++ G+ S T+SS++ G+ R+G ++ + K
Sbjct: 405 -----GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 317 DEFVGCSLVDFYSFFG----SIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
D + LVD S G ++ ++ + +L+VV + S+I G +F+ AL +
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 373 RQFMASGRKPDEFIMSSVMGV-------CADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
R G KPD ++VM V C M G Q+ + IS I V N
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQRNKISADIAVCNVV 578
Query: 426 ICMYAKSGDIDSARLTFQEI----ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGI 481
I + K I+ A F + PD+V+++ MIC +EA RIFEL+ V+
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 638
Query: 482 KPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
PN +TL ++ +D +R F IM + G N C++D ++ +E +
Sbjct: 639 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 542 RF---ILDSGFADDPVMWRALL-GAC---RVHKDTMMGKHIADRVIELEPHAAASYVLLY 594
+ + + G + V + ++ G C RV + T + D +L P A Y +L
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLPDVVA-YAILI 754
Query: 595 NIYNDAGKEKRALEVRKLMQDQGVKKE 621
Y G+ A + + M GVK +
Sbjct: 755 RGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 25/366 (6%)
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTM 249
I K + A + + +AL+ Y ++G +A+ VF S + + N YN +
Sbjct: 250 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 250 IAGFLQRQTVSCGYA----REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
I +CG ++ F EMQ G+ + TF+S++ C G + A R +
Sbjct: 310 ID--------ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNL 361
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP----KLDVVSWTSMIAGCVE 361
++ + ++ D F +L+D G +D P +VVS++++I G +
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
G+F+ AL+L + G D ++++ + + + I GI ++
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481
Query: 422 QNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMT 477
N+ + Y K G D + F E++ P+++++S +I + G EA+ IF
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
+G++ + + ++ A GLV + + M K+ GI+ NV I+D GR+ +
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATM 600
Query: 538 EDAKRF 543
+ + +
Sbjct: 601 DRSADY 606
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 194/483 (40%), Gaps = 51/483 (10%)
Query: 78 AGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE 137
+ +++ G + + + I + G ++ ++LI+ Y + E A +F++ E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 138 L----DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLN 193
+ V++N++I + G F++V + M R+G+ T S L A C L
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLW 355
Query: 194 CIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTM 249
+ L + ++ LLD K G + A + N Y+T+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 250 IAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQI 309
I GF + G EAL LF EM+ LG+ + ++++++ +G I ++
Sbjct: 416 IDGFAK-----AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 310 CKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVV----SWTSMIAGCVENGKF 365
++ D +L+ Y G D+ + F + V+ +++++I G + G +
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 366 ETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQ 425
+ A+ + R+F ++G + D + S+++ S + K GIS ++ NS
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 426 ICMYAKSGDID---------------SARLTFQEIENPDVVSWSEMICCNAHHGFANE-- 468
I + +S +D SA E E V+ + +++ +
Sbjct: 591 IDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE 650
Query: 469 --------ALRIFELMTVSGIKPNHITLLGVLTACSH------GGLVDEGLRYFEIMKKD 514
L +F M IKPN +T +L ACS ++ E LR F+ K
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD--NKV 708
Query: 515 YGI 517
YG+
Sbjct: 709 YGV 711
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 34/294 (11%)
Query: 349 VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD-----MAAARSG 403
V +++++I+ +G E A+S+ G +P+ ++V+ C A+
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICC 459
+++Q + G+ I NS + + ++ G ++AR F E+ N DV S++ ++
Sbjct: 328 DEMQ----RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 460 NAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITA 519
G + A I M V I PN ++ V+ + G DE L F M+ GI
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LGIAL 442
Query: 520 NVKHSTCIVDLLGRAGRLEDAK---RFILDSGFADDPVMWRALLGAC-------RVHK-- 567
+ ++ + + GR E+A R + G D V + ALLG V K
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 568 DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
M +H+ ++ +Y L + Y+ G K A+E+ + + G++ +
Sbjct: 503 TEMKREHVLPNLL--------TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 55/70 (78%)
Query: 687 HHSEKLAVTFGIISLPKSAPVRVIKNLRVCSDCHVTMKLISKLEKRKIILRDAIRFHHFK 746
HHSE+LA+ FGII+ P +RV+KNLR+C DCH +K++S +E R+II+RD RFHHF+
Sbjct: 170 HHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFR 229
Query: 747 EGLCSCKDYW 756
+G CSC DYW
Sbjct: 230 DGNCSCGDYW 239
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 165/414 (39%), Gaps = 68/414 (16%)
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
D +S+++++ GY R G+ +V++L+ M R GL + Y GS IG +
Sbjct: 280 DVISYSTVVNGYCRFGE-LDKVWKLIEVMKRKGLKPNSYIYGS------------IIGLL 326
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
+C + + G L D V+ Y T+I GF +R
Sbjct: 327 CRIC--------KLAEAEEAFSEMIRQGILPDTVV------------YTTLIDGFCKR-- 364
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF-RAGRQIHAQICKKNLQCD 317
G R A F EM + T+++I+ IGD AG+ H CK L+ D
Sbjct: 365 ---GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPD 420
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLR 373
L++ Y G + D R N + +VV++T++I G + G ++A LL
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
+ G +P+ F +S++ ++ G G++ + + + Y KSG
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 434 DIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
++D A+ +E+ P +V+++ ++ HG + ++ M GI PN T
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT-- 598
Query: 490 GVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
F + K Y I N+K +T I + G D K +
Sbjct: 599 ------------------FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 11/284 (3%)
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
TP DV+S+++++ G G+ + L+ G KP+ +I S++G+ +
Sbjct: 278 TP--DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICC 459
E+ ++ GI +V + I + K GDI +A F E+ + PDV++++ +I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 460 NAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITA 519
G EA ++F M G++P+ +T ++ G + + R M + G +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSP 454
Query: 520 NVKHSTCIVDLLGRAGRLEDAKRFILDS---GFADDPVMWRALL-GACRVHKDTMMGKHI 575
NV T ++D L + G L+ A + + G + + +++ G C+ K +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 576 ADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
+ +Y L + Y +G+ +A E+ K M +G++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 165/414 (39%), Gaps = 68/414 (16%)
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
D +S+++++ GY R G+ +V++L+ M R GL + Y GS IG +
Sbjct: 280 DVISYSTVVNGYCRFGE-LDKVWKLIEVMKRKGLKPNSYIYGS------------IIGLL 326
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQT 258
+C + + G L D V+ Y T+I GF +R
Sbjct: 327 CRIC--------KLAEAEEAFSEMIRQGILPDTVV------------YTTLIDGFCKR-- 364
Query: 259 VSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDF-RAGRQIHAQICKKNLQCD 317
G R A F EM + T+++I+ IGD AG+ H CK L+ D
Sbjct: 365 ---GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPD 420
Query: 318 EFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLR 373
L++ Y G + D R N + +VV++T++I G + G ++A LL
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
+ G +P+ F +S++ ++ G G++ + + + Y KSG
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 434 DIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
++D A+ +E+ P +V+++ ++ HG + ++ M GI PN T
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT-- 598
Query: 490 GVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF 543
F + K Y I N+K +T I + G D K +
Sbjct: 599 ------------------FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 11/284 (3%)
Query: 344 TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSG 403
TP DV+S+++++ G G+ + L+ G KP+ +I S++G+ +
Sbjct: 278 TP--DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 404 EQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICC 459
E+ ++ GI +V + I + K GDI +A F E+ + PDV++++ +I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 460 NAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITA 519
G EA ++F M G++P+ +T ++ G + + R M + G +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSP 454
Query: 520 NVKHSTCIVDLLGRAGRLEDAKRFILDS---GFADDPVMWRALL-GACRVHKDTMMGKHI 575
NV T ++D L + G L+ A + + G + + +++ G C+ K +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 576 ADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
+ +Y L + Y +G+ +A E+ K M +G++
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/490 (19%), Positives = 212/490 (43%), Gaps = 33/490 (6%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
G+ + + T++ ++ RN + + ++ G++ ++ + I + SK +E A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 129 RVLFDTCDELDDV----SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALK 184
+ LFD + ++ S+I GY R R+ +ELL M + + S YT G+ +K
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCR-EKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 185 ACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
C +D + N + +M I N+V+ T L+ + + DA+ V + +
Sbjct: 426 GMCSSGDLDGAYNIVKEM-----IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 241 H----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAI 296
+ F YN++I G + + + EA EM GL + FT+ + + +
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMD-----EARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 297 GDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSW 352
+F + + ++ + + ++ + L++ Y G + + + S D ++
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595
Query: 353 TSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALK 412
T ++ G +N K + A + R+ G PD F ++ + + + I ++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 413 FGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANE 468
G++ +I+ N + + +SG+I+ A+ E+ +P+ V++ +I G E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
A R+F+ M + G+ P+ ++ C V+ + F KK G ++ ++
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK--GCASSTAPFNALI 773
Query: 529 DLLGRAGRLE 538
+ + + G+ E
Sbjct: 774 NWVFKFGKTE 783
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 205/489 (41%), Gaps = 46/489 (9%)
Query: 88 RNLRLGEAIH--GSVLVTGMDGMIFVMNSLINMYSKCKRIEAARV----LFDTCDELDDV 141
+N R G+A+ + G+ IF NSLI SK KR++ AR + + + +
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHV 201
++ + I+GY+ + F + + M G+ + + C GK++
Sbjct: 524 TYGAFISGYIEASE-FASADKYVKEMRECGVLPNKVLCTGLINEYCKK------GKVIEA 576
Query: 202 CAIKLDLNSNMVVG-----TALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAG 252
C+ + ++G T L++ K + DA +F R + F Y +I G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 253 FLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKK 312
F + G ++A +F EM GL + ++ ++ G+ +++ ++ K
Sbjct: 637 FSK-----LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 313 NLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL-----DVVSWTSMIAGCVENGKFET 367
L + C+++D Y G + + R F+ KL D +T+++ GC E
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 368 ALSLL---RQFMASGRKPDEFIMSSVMGVC-ADMAAARSGEQIQGWALKFGISNFIIVQN 423
A+++ ++ AS P +++ V ++ + G +FG N + N
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN-DVTYN 809
Query: 424 SQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVS 479
I K G++++A+ F +++N P V++++ ++ G E +F+ +
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 480 GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKH--STCIVDLLG--RAG 535
GI+P+HI ++ A G+ + L + M + K STC L G + G
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 536 RLEDAKRFI 544
+E A++ +
Sbjct: 930 EMEVAEKVM 938
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 220/536 (41%), Gaps = 67/536 (12%)
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH 200
V++ ++I G+ + G+ R F+L M + G++ D S L + +G L
Sbjct: 287 VTFCTLINGFCKRGEMDR-AFDLFKVMEQRGIE-PDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQR 256
A+ + ++VV ++ +D+Y K+G L A +V++ N Y +I G Q
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
G EA G++ ++ G+ S T+SS++ G+ R+G ++ + K
Sbjct: 405 -----GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 317 DEFVGCSLVDFYSFFG----SIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
D + LVD S G ++ ++ + +L+VV + S+I G +F+ AL +
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 373 RQFMASGRKPDEFIMSSVMGV------------------------------------CAD 396
R G KPD ++VM V C
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI----ENPDVVS 452
M G Q+ + IS I V N I + K I+ A F + PD+V+
Sbjct: 580 MKPT-IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 453 WSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMK 512
++ MIC +EA RIFEL+ V+ PN +TL ++ +D +R F IM
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 513 KDYGITANVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFADDPVMWRALL-GAC---RV 565
+ G N C++D ++ +E + + + + G + V + ++ G C RV
Sbjct: 699 EK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 566 HKDTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKE 621
+ T + D +L P A Y +L Y G+ A + + M GVK +
Sbjct: 758 DEATNIFHQAIDA--KLLPDVVA-YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 161/391 (41%), Gaps = 64/391 (16%)
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
N + T+I GF +R G A LF M+ G+ +S+++ G
Sbjct: 285 NVVTFCTLINGFCKR-----GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG------IRCFNSTPKLDVVSWTSM 355
G ++ +Q K ++ D V S +D Y G + + C +P +VV++T +
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP--NVVTYTIL 397
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
I G ++G+ A + Q + G +P SS++ RSG + +K G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 416 SNFIIVQNSQICMYAKSGDI-----DSARLTFQEIENPDVVSWSEMICCNAHHGFANEAL 470
+++ + +K G + S ++ Q I +VV ++ +I +EAL
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR-LNVVVFNSLIDGWCRLNRFDEAL 516
Query: 471 RIFELMTVSGIKPNHITLLGVLTACSHGGLVDE--------------------------- 503
++F LM + GIKP+ T V+ G ++E
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 504 --------GLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFADD 552
GL+ F++M+++ I+A++ ++ LL + R+EDA +F +++ D
Sbjct: 577 CKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 553 PVMWRALL-GACRVHKDTMMGKHIADRVIEL 582
V + ++ G C + + A+R+ EL
Sbjct: 636 IVTYNTMICGYCSLRR-----LDEAERIFEL 661
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 211/486 (43%), Gaps = 37/486 (7%)
Query: 66 RIAGLPVS-DFTFAGVLAYCGSTRN-LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCK 123
R+ L +S D +L C R+ L L A+ G ++ G + I ++SL+N Y K
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 124 RIEAARVLFDTC----DELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTL 179
RI A L D + + V++N++I G + L + E L+ RM G +T
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHG-LFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 180 GSALKACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
G+ + C +D +L+ + KM K + +++V+ T ++D + DA+ +F
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKME-----KGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 236 ESFRYH----NDFMYNTMIAGFLQRQTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSI 289
N YN++I C Y R +A L +M +N + TFS++
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCL-------CNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD- 348
+ A V G +++ ++ K+++ D F SL++ + +D+ F D
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 349 ---VVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
VV++ ++I G + + E + L R+ G + ++++ ++
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNA 461
I + G+ II + + K G ++ A + F+ ++ PD+ +++ MI
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 462 HHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
G + +F +++ G+KPN I +++ GL +E F MK+D + +
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 522 KHSTCI 527
++T I
Sbjct: 572 TYNTLI 577
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 179/444 (40%), Gaps = 61/444 (13%)
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIG 196
V +N +++ ++ + F V L RM + + Y+ + C + +L +G
Sbjct: 81 VEFNKLLSAIAKM-NKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 197 KMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV-LVFESF--RYH-NDFMYNTMIAG 252
KM+ KL ++V ++LL+ Y +++AV LV + F Y N +NT+I G
Sbjct: 140 KMM-----KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 253 -FLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICK 311
FL + A EA+ L M G FT+ ++V GD + ++ K
Sbjct: 195 LFLHNK------ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 312 KNLQCDEFVGCSLVDFYSFFGSIDDGIRCF----NSTPKLDVVSWTSMIAGCVENGKFET 367
++ D + +++D + +++D + F N + +VV++ S+I G++
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
A LL + P+ S+++ E++ +K I
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI------------ 356
Query: 428 MYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHIT 487
+PD+ ++S +I H +EA +FELM PN +T
Sbjct: 357 -------------------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 488 LLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF---I 544
++ V+EG+ F M + G+ N ++ L +AG + A++ +
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 545 LDSGFADDPVMWRALL-GACRVHK 567
+ G D + + LL G C+ K
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGK 480
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 215/554 (38%), Gaps = 68/554 (12%)
Query: 64 EARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCK 123
E R GL +FT + VL+ C LR + + G + N+L+ ++ K
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 124 RIEAARVLFDTCDE----LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG-------- 171
A + +E D V++N ++A YVR G +E ++ M + G
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS-KEAAGVIEMMTKKGVMPNAITY 389
Query: 172 ------------------LDFSDYTLGSALKACCVDKSLNCIGK-------MLHVCAIKL 206
L +S G C + L+ +GK + +C +K
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 207 D-LNSNMVVGTALLDMYAKTGCLTDAVLVFESFR---YHNDF-MYNTMIAGFLQRQTVSC 261
+ + N +L + G VF + + D +NT+I+ + + C
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR-----C 504
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G +A ++ EM G N T+++++ A GD+R+G + + + K + E
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKLDVV-SW----TSMIAG--CVENGKFETALSLLRQ 374
++ Y+ G+ R N + + SW T ++A C E A +L
Sbjct: 565 SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL--- 621
Query: 375 FMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGD 434
F G KPD I +S++ + E I + G+S ++ NS + MY + G+
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 435 IDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLG 490
A + +E PD+VS++ +I G EA+R+ MT GI+P T
Sbjct: 682 CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNT 741
Query: 491 VLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI-----L 545
++ + G+ E E M K+ N +VD RAG+ +A F+
Sbjct: 742 FVSGYTAMGMFAEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800
Query: 546 DSGFADDPVMWRAL 559
D F D + AL
Sbjct: 801 DPCFDDQSIQRLAL 814
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 13/253 (5%)
Query: 323 SLVDFYSFFGSIDDGIRCFNST----PKLDVVSWTSMIAGCVENGK-FETALSLLRQFMA 377
+++ YS G + I F P +V++ ++ + G+ + L +L + +
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 378 SGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDS 437
G K DEF S+V+ CA R ++ G + N+ + ++ K+G
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 438 ARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLT 493
A +E+E D V+++E++ GF+ EA + E+MT G+ PN IT V+
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 494 ACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD---SGFA 550
A G DE L+ F M K+ G N ++ LLG+ R + + + D +G +
Sbjct: 395 AYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 551 DDPVMWRALLGAC 563
+ W +L C
Sbjct: 454 PNRATWNTMLALC 466
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 154/391 (39%), Gaps = 40/391 (10%)
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHND----FMYNTMIAGFLQRQTVSCGYAREALGLF 271
T +L Y++TG A+ +FE + YN ++ F + R+ LG+
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS----WRKILGVL 269
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
EM+ GL +FT S+++ AC G R ++ A++ + +L+ +
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 332 GSIDDGIRCF-----NSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
G + + NS P D V++ ++A V G + A ++ G P+
Sbjct: 330 GVYTEALSVLKEMEENSCPA-DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 387 MSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMY--------AKSGDIDSA 438
++V+ A ++G++ + L + + V N+ C Y KS +
Sbjct: 389 YTTVID-----AYGKAGKEDEALKLFYSMKEAGCVPNT--CTYNAVLSLLGKKSRSNEMI 441
Query: 439 RLTFQEIEN---PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTAC 495
++ N P+ +W+ M+ + G R+F M G +P+ T +++A
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 496 SH-GGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD---SGFAD 551
G VD Y E+ + G A V +++ L R G + I D GF
Sbjct: 502 GRCGSEVDASKMYGEMTRA--GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 552 DPVMWRALLGACRVHKDTMMG-KHIADRVIE 581
+ +L+ C +G + I +R+ E
Sbjct: 560 TETSY-SLMLQCYAKGGNYLGIERIENRIKE 589
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 213/497 (42%), Gaps = 43/497 (8%)
Query: 69 GLPVSDFTFAGVLAYCGSTRN-LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
G+P + +T++ +L C R+ L L A+ G ++ G + I ++SL+N Y KRI
Sbjct: 111 GIPHNHYTYS-ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 128 ARVLFD----TCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSAL 183
A L D T + + V++N++I G L + E L+ RM G T G +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLF-LHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 184 KACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
C D + N + KM L +++ ++D K + DA+ +F+
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQG-----KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 240 YH----NDFMYNTMIAGFLQRQTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKAC 293
N Y+++I+ C Y R +A L +M +N FTFS+++ A
Sbjct: 284 TKGIRPNVVTYSSLISCL-------CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DV 349
V G +++ ++ K+++ SL++ + +D+ + F DV
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
V++ ++I G + + E + + R+ G + + ++ ++I
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGF 465
+ G+ I+ N+ + K+G ++ A + F+ ++ P + +++ MI G
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+ +F +++ G+KP+ + +++ G +E F+ MK+D + +S
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED----GTLPNSG 572
Query: 526 CIVDLLGRAGRLEDAKR 542
C L+ RA RL D R
Sbjct: 573 CYNTLI-RA-RLRDGDR 587
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 209/489 (42%), Gaps = 39/489 (7%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWN 144
L L A+ ++ G + I ++SL+N Y KRI A L D E+ D ++
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLH 200
++I G L + E L+ +M + G T G+ + C +D +L+ + KM
Sbjct: 193 TLIHGLF-LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME- 250
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQR 256
K + +++V+ ++D K + DA+ +F + F Y+++I+
Sbjct: 251 ----KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL--- 303
Query: 257 QTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
C Y R +A L +M +N + TFS+++ A V G +++ ++ K+++
Sbjct: 304 ----CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD----VVSWTSMIAGCVENGKFETALS 370
D F SL++ + +D+ F D VV+++++I G + + E +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 371 LLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYA 430
L R+ G + ++++ + + + + G+ I+ N +
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 431 KSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHI 486
K+G + A + F+ ++ PD+ +++ MI G + +F +++ G+ PN I
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 487 TLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD 546
+++ G +E + MK+D + + ++T I L R G E + I +
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL-RDGDREASAELIKE 598
Query: 547 ---SGFADD 552
GFA D
Sbjct: 599 MRSCGFAGD 607
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 21/283 (7%)
Query: 273 EMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFG 332
+MQ LG++ +T+S + + A++ K + D SL++ Y
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 333 SIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
I D + + ++ D ++T++I G + K A++L+ Q + G +PD
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 389 SVM-GVCA----DMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQ 443
+V+ G+C D+A + + +G I +++ N+ I K +D A F
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKG-----KIEADVVIYNTIIDGLCKYKHMDDALNLFT 282
Query: 444 EIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA-CSHG 498
E++N PDV ++S +I C ++G ++A R+ M I PN +T ++ A G
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Query: 499 GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK 541
LV+ Y E++K+ I ++ + +++ RL++AK
Sbjct: 343 KLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAK 383
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 128/281 (45%), Gaps = 13/281 (4%)
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQ 407
D+V+ +S++ G + + A++L+ Q + G KPD F ++++ A +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 408 GWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHH 463
++ G ++ + + K GDID A +++E DVV ++ +I +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 464 GFANEALRIFELMTVSGIKPNHITLLGVLTA-CSHGGLVDEGLRYFEIMKKDYGITANVK 522
++AL +F M GI+P+ T +++ C++G D +++++ I NV
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK--INPNVV 329
Query: 523 HSTCIVDLLGRAGRLEDAKRF---ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRV 579
+ ++D + G+L +A++ ++ D + +L+ +H KH+ + +
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 580 IELE--PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGV 618
I + P+ +Y L + A + + +E+ + M +G+
Sbjct: 390 ISKDCFPN-VVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 207/469 (44%), Gaps = 37/469 (7%)
Query: 69 GLPVSDFTFAGVLAYCGSTRN-LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
G+ + +T+ +L C R+ + L A+ G ++ G + I ++SL+N Y KRI
Sbjct: 115 GISHNLYTY-NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 128 ARVLFDTCDEL----DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSAL 183
A L D E+ D +++ ++I G L + E L+ RM + G + T G +
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLF-LHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 184 KACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
C +D + N + KM A K++ +N+V+ + ++D K DA+ +F
Sbjct: 233 NGLCKRGDIDLAFNLLNKME---AAKIE--ANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 240 YH----NDFMYNTMIAGFLQRQTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKAC 293
N Y+++I+ C Y R +A L +M +N + TF++++ A
Sbjct: 288 NKGVRPNVITYSSLISCL-------CNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD----V 349
V G +++ ++ K+++ D F SL++ + +D+ F D V
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
V++ ++I G + + + + L R+ G + ++++ + + +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGF 465
+ G+ I+ N+ + K+G ++ A + F+ ++ P + +++ MI G
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
+ +F +++ G+KP+ I +++ GL +E F M++D
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 129/330 (39%), Gaps = 48/330 (14%)
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA-------- 292
HN + YN +I F +R +S AL L +M LG S T SS++
Sbjct: 118 HNLYTYNILINCFCRRSQISL-----ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 293 -CVAIGD------FRA----------GRQIHAQICKKNLQCDEFV--GCS--------LV 325
VA+ D +R G +H + + D V GC +V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 326 DFYSFFGSIDDGIRCFNSTP----KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRK 381
+ G ID N + +VV ++++I + + AL+L + G +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 382 PDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
P+ SS++ + ++ ++ I+ ++ N+ I + K G + A
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 442 FQEI----ENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSH 497
+ E+ +PD+ ++S +I H +EA +FELM PN +T ++
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 498 GGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
+DEG+ F M + + V ++T I
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 18/269 (6%)
Query: 126 EAARVLFDTCDELDD---VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSA 182
+A+R+L D + + V++N++I +V+ G E +L M + +D +T S
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGK-LVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 183 LKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH- 241
+ C+ L+ M + I D N+V L++ + K + + V +F
Sbjct: 372 INGFCMHDRLDEAKHMFEL-MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 242 ---NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGD 298
N Y T+I GF Q + C A+ +F +M G++ + T+++++ G
Sbjct: 431 LVGNTVTYTTLIHGFFQAR--DCDNAQM---VFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP----KLDVVSWTS 354
+ + + ++ + +++ G ++DG F S K DV+ + +
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 355 MIAGCVENGKFETALSLLRQFMASGRKPD 383
MI+G G E A +L R+ G PD
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPD 574
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 122/566 (21%), Positives = 218/566 (38%), Gaps = 121/566 (21%)
Query: 79 GVLAYCG-------STRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVL 131
GVL+Y S RN+ E + +L + + +F N LI + I+ A L
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 132 FDTCDEL----DDVSWNSIIAGYVRL---GDGFR-------------------------- 158
FD + + V++N++I GY +L DGF+
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 159 -----EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMV 213
EV +L M+R G + T + +K C + + + ++H ++ L +++
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ-ALVMHAEMLRHGLTPSVI 346
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQRQTVSCGYAREALG 269
T+L+ K G + A+ + R N+ Y T++ GF Q+ GY EA
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK-----GYMNEAYR 401
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
+ EM G + S T+++++ G + + +K L
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL--------------- 446
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
+P DVVS++++++G + + AL + R+ + G KPD SS
Sbjct: 447 --------------SP--DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSA-RLTFQEIEN- 447
++ + + + L+ G+ + I Y GD++ A +L + +E
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 448 --PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSH-------- 497
PDVV++S +I EA R+ + P+ +T ++ CS+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 498 -------GGLVDEGLRYFEIM----KKDYGITANVK-HSTCIVDLLGRAGRLEDAKRF-- 543
G++ E + FE M K G N+ H C RAG + A
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC------RAGDIRKAYTLYK 664
Query: 544 -ILDSGFADDPVMWRALLGACRVHKD 568
++ SGF V AL+ A +HK+
Sbjct: 665 EMVKSGFLLHTVTVIALVKA--LHKE 688
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/472 (19%), Positives = 191/472 (40%), Gaps = 77/472 (16%)
Query: 82 AYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE---- 137
YC R + G + S+ + G++ + N +IN + R++ + +
Sbjct: 249 GYC-KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 138 LDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI-- 195
LD+V++N++I GY + G+ F + + A M R GL S T S + + C ++N
Sbjct: 308 LDEVTYNTLIKGYCKEGN-FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 196 ---------------------------GKMLHVCAIKLDLNSN-----MVVGTALLDMYA 223
G M + ++N N +V AL++ +
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 224 KTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGL 279
TG + DA+ V E + + Y+T+++GF + V EAL + EM G+
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD-----EALRVKREMVEKGI 481
Query: 280 NCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIR 339
T+SS+++ + ++ ++ + L DEF +L++ Y G ++ ++
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 340 CFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCA 395
N + DVV+++ +I G + + A LL + P + +++ C+
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 396 DMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI----ENPDVV 451
++ I+G+ +K G + A F+ + PD
Sbjct: 602 NIEFKSVVSLIKGFCMK--------------------GMMTEADQVFESMLGKNHKPDGT 641
Query: 452 SWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDE 503
+++ MI + G +A +++ M SG + +T++ ++ A G V+E
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 161/365 (44%), Gaps = 15/365 (4%)
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A +F EM ++ + FT++ +++ G+ + ++ K + +L+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 327 FYSFFGSIDDGIRCFNSTP----KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
Y IDDG + S + +++S+ +I G G+ + +L + G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 383 DEFIMSSVM-GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLT 441
DE ++++ G C + + L+ G++ +I S I K+G+++ A
Sbjct: 309 DEVTYNTLIKGYCKE-GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 442 FQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSH 497
++ P+ +++ ++ + G+ NEA R+ M +G P+ +T ++
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 498 GGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA---KRFILDSGFADDPV 554
G +++ + E MK+ G++ +V + ++ R+ +++A KR +++ G D +
Sbjct: 428 TGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 555 MWRALLGACRVHKDTMMGKHIADRVIELE-PHAAASYVLLYNIYNDAGKEKRALEVRKLM 613
+ +L+ + T + + ++ + P +Y L N Y G ++AL++ M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 614 QDQGV 618
++GV
Sbjct: 547 VEKGV 551
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 152/362 (41%), Gaps = 17/362 (4%)
Query: 220 DMYAKTGCLTDAVLVFESFRYHNDFMYNTM-IAGFLQRQTVSCGYAREALGLFCEMQMLG 278
D+ AKT A LVF+S + D Y+T + + + +AL + Q G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 279 LNCSKFTFSSIVKACV-AIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG 337
++++++ A + + + + ++ + + + F L+ + F G+ID
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 338 IRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM-G 392
+ F+ +VV++ ++I G + K + LLR G +P+ + V+ G
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 393 VCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NP 448
+C + + + + G S + N+ I Y K G+ A + E+ P
Sbjct: 285 LCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYF 508
V++++ +I G N A+ + M V G+ PN T ++ S G ++E R
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD---SGFADDPVMWRALL-GACR 564
M D G + +V +++ G++EDA + D G + D V + +L G CR
Sbjct: 404 REM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 565 VH 566
+
Sbjct: 463 SY 464
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/530 (19%), Positives = 213/530 (40%), Gaps = 39/530 (7%)
Query: 43 DETPQRSIISCNSPASL-----LAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIH 97
D ++I+C SL F E + AG T+ +L G + + +
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 98 GSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE----LDDVSWNSIIAGYVRL 153
+++ G I NSLI+ Y++ ++ A L + E D ++ ++++G+ R
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM---LHVCAIKLDLNS 210
G + M +G + T + +K + K+ ++VC + D+
Sbjct: 398 GK-VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI-- 454
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFR----YHNDFMYNTMIAGFLQRQTVSCGYARE 266
V LL ++ + G ++ VF+ + +NT+I+ + + CG +
Sbjct: 455 --VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR-----CGSFEQ 507
Query: 267 ALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVD 326
A+ ++ M G+ T+++++ A G + ++ A++ + +E CSL+
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 327 FYS------FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
Y+ S+ + + P+ V +++ C + A + G
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPR--AVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL 440
PD ++S++ + + + + G + + NS + M+++S D +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 441 TFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
+EI PD++S++ +I + +A RIF M SGI P+ IT + + +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD 546
+ +E + M K +G N IVD + R ++AK F+ D
Sbjct: 746 ADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 53/320 (16%)
Query: 347 LDVVSWTSMIAGCVENGKFETAL------------------------------------S 370
LDV S+TS+I+ +G++ A+ S
Sbjct: 206 LDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS 265
Query: 371 LLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYA 430
L+ + + G PD + ++++ C + + Q+ G S + N+ + +Y
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 431 KSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHI 486
KS A E+ +P +V+++ +I A G +EA+ + M G KP+
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 487 TLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFILD 546
T +L+ G V+ + FE M ++ G N+ + + G G+ + + I D
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMK-IFD 443
Query: 547 S----GFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHA----AASYVLLYNIYN 598
G + D V W LL V M ++ E++ ++ L + Y+
Sbjct: 444 EINVCGLSPDIVTWNTLLA---VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 599 DAGKEKRALEVRKLMQDQGV 618
G ++A+ V + M D GV
Sbjct: 501 RCGSFEQAMTVYRRMLDAGV 520
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 195/493 (39%), Gaps = 67/493 (13%)
Query: 100 VLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWNSIIAGYVRLGD 155
V+ G+ +++ + IN + K ++E A LF +E + V++N++I G G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA--IKLDLNSNMV 213
+ E F +M G++ + T +K K IG V K N++
Sbjct: 311 -YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR---IGDAYFVLKEMTKKGFPPNVI 366
Query: 214 VGTALLDMYAKTGCLTDAV----LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
V L+D + + G L A+ L+ YNT+I G+ + G A A
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN-----GQADNAER 421
Query: 270 LFCEMQMLGLNCSKFTFSSIV----------KACVAIGDF-------------------- 299
L EM +G N ++ +F+S++ A +G+
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 300 RAGRQIHA-----QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRC----FNSTPKLDVV 350
+ G+ A Q K D +L+ G +D+ R +D V
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 351 SWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW- 409
S+ ++I+GC K + A L + + G KPD + S + +C + E IQ W
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL--ICGLFNMNKVEEAIQFWD 599
Query: 410 -ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHG 464
+ G+ + + I K+ + + F E+ + P+ V ++ +I G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
+ AL + E M GI PN T ++ S V+E FE M+ + G+ NV H
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHY 718
Query: 525 TCIVDLLGRAGRL 537
T ++D G+ G++
Sbjct: 719 TALIDGYGKLGQM 731
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 195/493 (39%), Gaps = 67/493 (13%)
Query: 100 VLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWNSIIAGYVRLGD 155
V+ G+ +++ + IN + K ++E A LF +E + V++N++I G G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA--IKLDLNSNMV 213
+ E F +M G++ + T +K K IG V K N++
Sbjct: 311 -YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR---IGDAYFVLKEMTKKGFPPNVI 366
Query: 214 VGTALLDMYAKTGCLTDAV----LVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
V L+D + + G L A+ L+ YNT+I G+ + G A A
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN-----GQADNAER 421
Query: 270 LFCEMQMLGLNCSKFTFSSIV----------KACVAIGDF-------------------- 299
L EM +G N ++ +F+S++ A +G+
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 300 RAGRQIHA-----QICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRC----FNSTPKLDVV 350
+ G+ A Q K D +L+ G +D+ R +D V
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 351 SWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW- 409
S+ ++I+GC K + A L + + G KPD + S + +C + E IQ W
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL--ICGLFNMNKVEEAIQFWD 599
Query: 410 -ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHG 464
+ G+ + + I K+ + + F E+ + P+ V ++ +I G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 465 FANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHS 524
+ AL + E M GI PN T ++ S V+E FE M+ + G+ NV H
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHY 718
Query: 525 TCIVDLLGRAGRL 537
T ++D G+ G++
Sbjct: 719 TALIDGYGKLGQM 731
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 200/461 (43%), Gaps = 35/461 (7%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWN 144
+ L A+ G ++ G + I ++SL+N Y KRI A L D E+ D +++
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLH 200
++I G L + E L+ RM + G + T G + C D +LN + KM
Sbjct: 195 TLIHGLF-LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME- 252
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQR 256
A K++ +++V+ ++D K + DA+ +F+ N Y+++I+
Sbjct: 253 --AAKIE--ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL--- 305
Query: 257 QTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
C Y R +A L +M +N + TF++++ A V G F +++ + K+++
Sbjct: 306 ----CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALS 370
D F SLV+ + +D + F DVV++ ++I G ++ + E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 371 LLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYA 430
L R+ G D ++++ + +++ + G+ I+ + +
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 431 KSGDIDSARLTFQEIENP----DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHI 486
+G ++ A F ++ D+ ++ MI G ++ +F +++ G+KPN +
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 487 TLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
T +++ L+ E + MK+D + + ++T I
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 206/473 (43%), Gaps = 40/473 (8%)
Query: 80 VLAYCGSTRN-LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL 138
+L C R+ + L A+ G ++ G + I ++SL+N Y KRI A L D E+
Sbjct: 50 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 109
Query: 139 ----DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDK 190
D +++ ++I G L + E L+ RM + G + T G + C +D
Sbjct: 110 GYRPDTITFTTLIHGLF-LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMY 246
+ N + KM A K++ +++V+ ++D K + DA+ +F+ N Y
Sbjct: 169 AFNLLNKME---AAKIE--ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 247 NTMIAGFLQRQTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQ 304
+++I+ C Y R +A L +M +N + TF++++ A V G F +
Sbjct: 224 SSLISCL-------CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 305 IHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCF------NSTPKLDVVSWTSMIAG 358
+H + K+++ D F SL++ + +D + F + P LD ++ ++I G
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD--TYNTLIKG 334
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
++ + E L R+ G D ++++ + +++ + G+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIENP----DVVSWSEMICCNAHHGFANEALRIFE 474
I+ + + +G ++ A F ++ D+ ++ MI G ++ +F
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
+++ G+KPN +T +++ L+ E + MK+D + + ++T I
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 117/544 (21%), Positives = 222/544 (40%), Gaps = 46/544 (8%)
Query: 104 GMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWNSIIAGYVRLGDGFRE 159
G+ +FV N+LI+ K ++ A +LFD ++ +DV+++ +I + R G
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK-LDT 420
Query: 160 VFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCI-GKMLHVCAIKLDLNSNMVVGTAL 218
L M +GL S Y S + C ++ G M + KL+ +V T+L
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE--PTVVTYTSL 478
Query: 219 LDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM 274
+ Y G + A+ ++ + + + T+++G + G R+A+ LF EM
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR-----AGLIRDAVKLFNEM 533
Query: 275 QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI 334
+ ++ T++ +++ GD + ++ +K + D + L+ G
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 335 D------DGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS 388
DG+ N +L+ + +T ++ G GK E ALS+ ++ + G D
Sbjct: 594 SEAKVFVDGLHKGNC--ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV--- 648
Query: 389 SVMGVCADMAAARSGEQIQGWALK----FGISNFIIVQNSQICMYAKSGDIDSA----RL 440
GV D + ++ LK G+ ++ S I +K+GD A L
Sbjct: 649 -CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 441 TFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGL 500
E P+ V+++ +I GF NEA + M PN +T L + G +
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 501 -VDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRFI---LDSGFADDPVMW 556
+ + + + K G+ AN ++ R GR+E+A I + G + D + +
Sbjct: 768 DMQKAVELHNAILK--GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 557 RALLGACRVHKDTMMGKHIADRVIE--LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
++ D + + + E + P A L++ AG+ +A E+R M
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV-AGEMGKATELRNEML 884
Query: 615 DQGV 618
QG+
Sbjct: 885 RQGL 888
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 22/332 (6%)
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
YN +I G ++Q V EA+G+ ++ L T+ ++V + +F G ++
Sbjct: 265 YNVLIDGLCKKQKVW-----EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM 319
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRC------FNSTPKLDVVSWTSMIAGC 359
++ E SLV+ G I++ + F +P L V + ++I
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV--YNALIDSL 377
Query: 360 VENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFI 419
+ KF A L + G +P++ S ++ + + G + G+ +
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 420 IVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFEL 475
NS I + K GDI +A E+ N P VV+++ ++ G N+ALR++
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
MT GI P+ T +L+ GL+ + ++ F M ++ + N +++ G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEG 556
Query: 536 RLEDAKRFI---LDSGFADDPVMWRALL-GAC 563
+ A F+ + G D +R L+ G C
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 165/427 (38%), Gaps = 82/427 (19%)
Query: 105 MDGMIFVMNSLINMYSKCKRIEAARVLFD------TCDELDDVSWNSIIAGYVRLGDGFR 158
++G V+NSL+N K R+E A LFD +C+ D ++N +I G +G
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN--DTKTFNILIRGLCGVGKA-E 223
Query: 159 EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTAL 218
+ ELL M G + T + ++ C LN +M
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK------------------ 265
Query: 219 LDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
D+ + + C D V Y +MI+G+ + G REA L +M LG
Sbjct: 266 -DVKSGSVCSPDVV------------TYTSMISGYCK-----AGKMREASSLLDDMLRLG 307
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
+ + TF+ +V G+ +I ++ FG
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-------------------FG------ 342
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
CF DVV++TS+I G G+ L + A G P+ F S ++ +
Sbjct: 343 -CFP-----DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWS 454
++ G I + N I + K+G ++ A + +E+E PD ++++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 455 EMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
+I + G EA+ IF M G P+ IT+ +L+ G+ E +I +K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK- 515
Query: 515 YGITANV 521
G + NV
Sbjct: 516 -GQSNNV 521
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 125/332 (37%), Gaps = 71/332 (21%)
Query: 213 VVGTALLDMYAKTGCLTDAVLVFES---FRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
+V +LL+ K + DA+ +F+ F+ ND T L R G A +AL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND----TKTFNILIRGLCGVGKAEKALE 227
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
L M G T++++++ CK N L
Sbjct: 228 LLGVMSGFGCEPDIVTYNTLIQG----------------FCKSN---------ELNKASE 262
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
F + G C +P DVV++TSMI+G + GK A SLL + G P +
Sbjct: 263 MFKDVKSGSVC---SP--DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD 449
++ A + E+I+G + FG C PD
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFG------------CF-------------------PD 346
Query: 450 VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA-CSHGGLVDEGLRYF 508
VV+++ +I G ++ R++E M G+ PN T ++ A C+ L+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
++ KD I ++D +AG++ +A
Sbjct: 407 QLASKD--IIPQPFMYNPVIDGFCKAGKVNEA 436
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 165/427 (38%), Gaps = 82/427 (19%)
Query: 105 MDGMIFVMNSLINMYSKCKRIEAARVLFD------TCDELDDVSWNSIIAGYVRLGDGFR 158
++G V+NSL+N K R+E A LFD +C+ D ++N +I G +G
Sbjct: 167 VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN--DTKTFNILIRGLCGVGKA-E 223
Query: 159 EVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTAL 218
+ ELL M G + T + ++ C LN +M
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK------------------ 265
Query: 219 LDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
D+ + + C D V Y +MI+G+ + G REA L +M LG
Sbjct: 266 -DVKSGSVCSPDVV------------TYTSMISGYCK-----AGKMREASSLLDDMLRLG 307
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
+ + TF+ +V G+ +I ++ FG
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-------------------FG------ 342
Query: 339 RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMA 398
CF DVV++TS+I G G+ L + A G P+ F S ++ +
Sbjct: 343 -CFP-----DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 399 AARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWS 454
++ G I + N I + K+G ++ A + +E+E PD ++++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 455 EMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKD 514
+I + G EA+ IF M G P+ IT+ +L+ G+ E +I +K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK- 515
Query: 515 YGITANV 521
G + NV
Sbjct: 516 -GQSNNV 521
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 125/332 (37%), Gaps = 71/332 (21%)
Query: 213 VVGTALLDMYAKTGCLTDAVLVFES---FRYHNDFMYNTMIAGFLQRQTVSCGYAREALG 269
+V +LL+ K + DA+ +F+ F+ ND T L R G A +AL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND----TKTFNILIRGLCGVGKAEKALE 227
Query: 270 LFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYS 329
L M G T++++++ CK N L
Sbjct: 228 LLGVMSGFGCEPDIVTYNTLIQG----------------FCKSN---------ELNKASE 262
Query: 330 FFGSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
F + G C +P DVV++TSMI+G + GK A SLL + G P +
Sbjct: 263 MFKDVKSGSVC---SP--DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD 449
++ A + E+I+G + FG C PD
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFG------------CF-------------------PD 346
Query: 450 VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTA-CSHGGLVDEGLRYF 508
VV+++ +I G ++ R++E M G+ PN T ++ A C+ L+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 509 EIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
++ KD I ++D +AG++ +A
Sbjct: 407 QLASKD--IIPQPFMYNPVIDGFCKAGKVNEA 436
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 178/417 (42%), Gaps = 22/417 (5%)
Query: 125 IEAARVLFDTCDELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALK 184
+E R + D+ ++ S ++ G R G+ + +L+ G+ YT + +
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGE-VEKSKKLIKEFSVKGIKPEAYTYNTIIN 267
Query: 185 ACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH--- 241
A + + + +L V K + N V T L+++ K G ++DA +F+ R
Sbjct: 268 AYVKQRDFSGVEGVLKVMK-KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE 326
Query: 242 -NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
+ +Y ++I+ ++ G + A LF E+ GL+ S +T+ +++ +G+
Sbjct: 327 SDVHVYTSLISWNCRK-----GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK----LDVVSWTSMI 356
A + ++ K + + V +L+D Y G +D+ ++ + DV + + I
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT-I 440
Query: 357 AGCVENGK-FETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
A C K ++ A L + M G K ++++ V +++ G+
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALR 471
I N I Y K G I AR +E +PD +++ +I +EA+R
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
+F M + G+ N +T +++ S G DE ++ MK+ G T + K T ++
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK-GYTIDNKVYTALI 616
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 152/375 (40%), Gaps = 50/375 (13%)
Query: 63 REARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIF---VMNSLINMY 119
+E + G+ +T+ ++ R+ + G + V DG+++ L+ +
Sbjct: 248 KEFSVKGIKPEAYTYNTIINAYVKQRDF---SGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 120 SKCKRIEAARVLFDTCDEL---DDVS-WNSIIAGYVRLGDGFREVFELLARMHRSGLDFS 175
K ++ A LFD E DV + S+I+ R G+ + F L + GL S
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN-MKRAFLLFDELTEKGLSPS 363
Query: 176 DYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVF 235
YT G+ + C + +++ K +N VV L+D Y + G + +A +++
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSK-GVNITQVVFNTLIDGYCRKGMVDEASMIY 422
Query: 236 ---ESFRYHND-FMYNT--------------------MIAGFLQRQTVSC---------- 261
E + D F NT M+ G ++ TVS
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 262 GYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
G EA LF EM G+ + T++ ++ A G + R++ A + + D +
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 322 CSLVDFYSFFGSIDDGIRCFNST--PKLD--VVSWTSMIAGCVENGKFETALSLLRQFMA 377
SL+ ++D+ +R F+ LD V++T MI+G + GK + A L +
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 378 SGRKPDEFIMSSVMG 392
G D + ++++G
Sbjct: 603 KGYTIDNKVYTALIG 617
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 136/347 (39%), Gaps = 34/347 (9%)
Query: 2 VLNLIRSQPNPFIPSKFPFLLTLPFSNPVHSPIRTRTLHLFDETPQRSIIS--------- 52
VL +++ + + L+ L N S LFDE +R I S
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE----KLFDEMRERGIESDVHVYTSLI 336
Query: 53 ------CNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMD 106
N + L F E GL S +T+ ++ + E + + G++
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 107 GMIFVMNSLINMYSKCKRIEAARVLFDTCD----ELDDVSWNSIIAGYVRLGDGFREVFE 162
V N+LI+ Y + ++ A +++D + + D + N+I + + RL + E +
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL-KRYDEAKQ 455
Query: 163 LLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMY 222
L RM G+ S + + + C + ++ K L V + N + ++ Y
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE-EAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 223 AKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
K G + +A + + + + + Y ++I G V EA+ LF EM + G
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD-----EAMRLFSEMGLKG 569
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLV 325
L+ + T++ ++ G ++ ++ +K D V +L+
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/476 (19%), Positives = 194/476 (40%), Gaps = 59/476 (12%)
Query: 69 GLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAA 128
G+ + +T++ + Y L L AI G ++ G I +NSL+N + RI A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 129 RVLFDTCDEL----DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALK 184
L D E+ D V++ +++ G + E L+ RM G T G+ +
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA-SEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 185 ACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRY 240
C D +LN + KM K D V+
Sbjct: 224 GLCKRGEPDLALNLLNKM------------------------EKGKIEADVVI------- 252
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
YNT+I G + + + +A LF +M+ G+ FT++ ++ G +
Sbjct: 253 -----YNTIIDGLCKYK-----HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK-----LDVVSWTSM 355
++ + + +KN+ D +L+D + G + + + ++ K DVV++ ++
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 356 IAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGI 415
I G + + E + + R+ G + ++++ + + + + G+
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIENP----DVVSWSEMICCNAHHGFANEALR 471
I+ N + +G++++A + F+ ++ D+V+++ MI G +
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
+F +++ G+KPN +T +++ GL +E F MK+D + + ++T I
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 118/303 (38%), Gaps = 15/303 (4%)
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
N+++ GF +S EA+ L +M +G TF+++V +
Sbjct: 149 NSLLNGFCHGNRIS-----EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK----LDVVSWTSMIAGCVEN 362
++ K Q D ++++ G D + N K DVV + ++I G +
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
+ A L + G KPD F + ++ + ++ L+ I+ ++
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 423 NSQICMYAKSGDIDSARLTFQEIEN-----PDVVSWSEMICCNAHHGFANEALRIFELMT 477
N+ I + K G + A + E+ PDVV+++ +I + E + +F M+
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
G+ N +T ++ D F+ M D G+ ++ ++D L G +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNV 442
Query: 538 EDA 540
E A
Sbjct: 443 ETA 445
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 182/424 (42%), Gaps = 58/424 (13%)
Query: 104 GMDGMIFVMNSLINMYSKCKRI----EAARVLFDTCDELDDVSWNSIIAGYVRLGDGFRE 159
G + LIN+Y+K +I E +RV+ + + + +++ +I G+V+L D +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD-WAN 537
Query: 160 VFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVG 215
F + M + G+ + + A C +D+++ + +M KL
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ-----KLRHRPTTRTF 592
Query: 216 TALLDMYAKTGCLTDAVLVFESFR----YHNDFMYNTMIAGFLQRQTVSCGYAREALGLF 271
++ YAK+G + ++ VF+ R +N +I G ++++ + +A+ +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME-----KAVEIL 647
Query: 272 CEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFF 331
EM + G++ ++ T++ I++ ++GD G+ + +F
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGD--TGKA-----------------------FEYF 682
Query: 332 GSIDDGIRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
R N +D+ ++ +++ C ++G+ ++AL++ ++ A + F+ + ++
Sbjct: 683 ------TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----N 447
A + K G+ I S I +K+GD++ A T +E+E
Sbjct: 737 DGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVK 796
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY 507
P++ +++ +I A +AL +E M GIKP+ +LT+ + E Y
Sbjct: 797 PNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIY 856
Query: 508 FEIM 511
+M
Sbjct: 857 SGVM 860
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 192/471 (40%), Gaps = 63/471 (13%)
Query: 142 SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHV 201
++N ++ GY +LG+ E + ++++ +GLD +T S + C K L+ K+ +
Sbjct: 220 TYNKMVNGYCKLGN-VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 202 CAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDF----MYNTMIAGFLQRQ 257
+K N V T L+ + +A+ +F + F Y +I
Sbjct: 279 MPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL---- 333
Query: 258 TVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQ 315
CG R EAL L EM+ G+ + T++ ++ + + F R++ Q+ +K L
Sbjct: 334 ---CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 316 CDEFVGCSLVDFYSFFGSIDDGI---------------RCFNSTPK-------------- 346
+ +L++ Y G I+D + R +N K
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 347 ---------LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM-GVCAD 396
DVV++ S+I G +G F++A LL G PD++ +S++ +C
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVS 452
+ + K G++ +++ + I Y K+G +D A L +++ + P+ ++
Sbjct: 511 KRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 453 WSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMK 512
++ +I G EA + E M G++P T ++ G D F+ M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 513 KDYGITANVKHSTCIVDLLGRAGRLEDAKRFIL---DSGFADDPVMWRALL 560
G + T + R GRL DA+ + ++G + D + +L+
Sbjct: 630 SS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 123/629 (19%), Positives = 243/629 (38%), Gaps = 127/629 (20%)
Query: 100 VLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD----ELDDVSWNSIIAG------ 149
++ G+D F SLI Y + K +++A +F+ ++V++ +I G
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 150 -------YVRLGDG---------------------FREVFELLARMHRSGL--DFSDYT- 178
+V++ D E L+ M +G+ + YT
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 179 -LGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFES 237
+ S C +K+ +G+ML + L N++ AL++ Y K G + DAV V E
Sbjct: 364 LIDSLCSQCKFEKARELLGQML-----EKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 238 FRYH----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKAC 293
N YN +I G+ + +A+G+ +M + T++S++
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN------VHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKL----DV 349
G+F + ++ + + + L D++ S++D +++ F+S + +V
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM-GVCADMAAARSGEQIQG 408
V +T++I G + GK + A +L + ++ P+ ++++ G+CAD + ++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD-GKLKEATLLEE 591
Query: 409 WALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI----------------------- 445
+K G+ + I K GD D A FQ++
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 446 -------------EN---PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLL 489
EN PD+ ++S +I G N A + + M +G +P+ T L
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 490 GV------------------LTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
+ L A S+ D + E M ++ +T N K ++ +
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM-VEHSVTPNAKSYEKLILGI 770
Query: 532 GRAGRLEDAKRFI----LDSGFADDPVMWRALLG-ACRVHKDTMMGKHIADRV-IELEPH 585
G L A++ + G + +++ ALL C++ K K + D + + P
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 586 AAASYVLLYNIYNDAGKEKRALEVRKLMQ 614
+ VL+ +Y KE+ + L+Q
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQ 859
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 200/446 (44%), Gaps = 36/446 (8%)
Query: 137 ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSG--------LDFSDYTLGSALKACCV 188
E D +S+NS+I G+ R GD R +L + S + F+ G + K +
Sbjct: 88 EPDVISYNSLIDGHCRNGD-IRSASLVLESLRASHGFICKPDIVSFNSLFNGFS-KMKML 145
Query: 189 DKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDF 244
D+ +G ML C+ N+V + +D + K+G L A+ F S + N
Sbjct: 146 DEVFVYMGVMLKCCS------PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVV 199
Query: 245 MYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQ 304
+ +I G+ + G A+ L+ EM+ + ++ + T+++++ G+ + +
Sbjct: 200 TFTCLIDGYCK-----AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEE 254
Query: 305 IHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIR----CFNSTPKLDVVSWTSMIAGCV 360
+++++ + ++ + V +++D + G D+ ++ N +LD+ ++ +I+G
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFII 420
NGK + A ++ S PD I +++M ++ + ++ G ++
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 421 VQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSG 480
++ I AK+G + A + F IE + V ++ +I G E R+F ++ +G
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFC-IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 481 IKPNHITLLGVLTA-CSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLED 539
+ P+ + C G LVD ++++ G+ ++ T ++ L G + +
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE--GLLLDLLAYTTLIYGLASKGLMVE 491
Query: 540 AKRF---ILDSGFADDPVMWRALLGA 562
A++ +L+SG + D ++ L+ A
Sbjct: 492 ARQVFDEMLNSGISPDSAVFDLLIRA 517
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 29/271 (10%)
Query: 368 ALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQIC 427
+L L ++ G P +SV+ + + E I +FG +I NS I
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 428 MYAKSGDIDSARLTFQEIE-------NPDVVSWSEMICCNAHHGFANEAL--RIFELMTV 478
+ ++GDI SA L + + PD+VS++ + +GF+ + +F M V
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLF-----NGFSKMKMLDEVFVYMGV 154
Query: 479 --SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
PN +T + G + L+ F MK+D ++ NV TC++D +AG
Sbjct: 155 MLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD-ALSPNVVTFTCLIDGYCKAGD 213
Query: 537 LEDAKRFILD---SGFADDPVMWRALL-GACR----VHKDTMMGKHIADRVIELEPHAAA 588
LE A + + + V + AL+ G C+ + M + + DRV EP++
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV---EPNSLV 270
Query: 589 SYVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
Y + + + G A++ M +QG++
Sbjct: 271 -YTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 203/482 (42%), Gaps = 37/482 (7%)
Query: 69 GLPVSDFTFAGVLAYCGSTRN-LRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEA 127
G+ + +T++ +L C R+ L L A+ ++ G + I +NSL+N + RI
Sbjct: 111 GISHNLYTYS-ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 128 ARVLFDTCDEL----DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSAL 183
A L E+ D ++N++I G R E L+ RM G T G +
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA-SEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 184 KACC----VDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR 239
C +D +L+ + KM + +V+ ++D + DA+ +F
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQG-----KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 240 YH----NDFMYNTMIAGFLQRQTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKAC 293
N YN++I C Y R +A L +M +N + TFS+++ A
Sbjct: 284 NKGIRPNVVTYNSLIRCL-------CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 294 VAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLD----V 349
V G +++ ++ K+++ D F SL++ + +D+ F D V
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 350 VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGW 409
V++ ++I G + + + + L R+ G + ++++ + + +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 410 ALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGF 465
+ G+ I+ + + +G +++A + F+ ++ PD+ +++ MI G
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 466 ANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHST 525
+ +F +++ G+KPN +T +++ GL +E F MK++ + + ++T
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 526 CI 527
I
Sbjct: 577 LI 578
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 171/435 (39%), Gaps = 51/435 (11%)
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH 200
V ++ +++ ++ + F V L +M G+ + YT S L C +S + +
Sbjct: 82 VEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYTY-SILINCFCRRSQLSLALAVL 139
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAV-LVFESFR--YHND-FMYNTMIAGFLQR 256
+KL ++V +LL+ + ++DAV LV + Y D F +NT+I G +
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
S EA+ L M + G T+ +V GD + ++ + ++
Sbjct: 200 NRAS-----EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCF----NSTPKLDVVSWTSMIAGCVENGKFETALSLL 372
+ +++D + +++D + F N + +VV++ S+I G++ A LL
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS 432
+ P+ S+++ E++ +K I
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI----------------- 357
Query: 433 GDIDSARLTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVL 492
+PD+ ++S +I H +EA +FELM PN +T ++
Sbjct: 358 --------------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 493 TACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK---RFILDSGF 549
VDEG+ F M + G+ N T ++ +A ++A+ + ++ G
Sbjct: 404 KGFCKAKRVDEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 550 ADDPVMWRALL-GAC 563
D + + LL G C
Sbjct: 463 LPDIMTYSILLDGLC 477
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 18/286 (6%)
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC---ADMAAARS 402
K D+V++ +MI G + G+ + A+ LR G + D+ +++ C +D + +
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 403 -GEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI----ENPDVVSWSEMI 457
+++ ++ F +V I K G ++ F+ + P+V ++ +I
Sbjct: 314 LYQEMDEKGIQVPPHAFSLV----IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 458 CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGI 517
A G +A+R+ M G KP+ +T V+ G V+E L YF + D G+
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GL 428
Query: 518 TANVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFADDPVMWRALLGACRVHKDTMMGKH 574
N + ++D LG+AGR+++A+R + + G D + AL+ A H+
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 575 IADRVIELE--PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGV 618
+ R+ E E +Y +L + + + AL++ +M D+G+
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 142/354 (40%), Gaps = 56/354 (15%)
Query: 234 VFESFRYHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKA 292
V ES R D + YNTMI G+ + G ++A+ +M+ G K T+ ++++A
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCK-----AGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 293 CVAIGDFRAGRQIHAQICKKNLQ-------------CDE--------------------- 318
C A DF + ++ ++ +K +Q C E
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 319 -FVGCSLVDFYSFFGSIDDGIRCF----NSTPKLDVVSWTSMIAGCVENGKFETALSLLR 373
+ L+D Y+ GS++D IR + K DVV+++ ++ G +NG+ E AL
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 374 QFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSG 433
G + SS++ E++ + G + N+ I + K
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Query: 434 DIDSARLTFQEIENPD-----VVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
+D A F+ +E + V +++ ++ EAL+++++M GI P
Sbjct: 482 KVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTC--IVDLLGRAGRLEDA 540
+ T G V + + + + + C +++ L +AGR+++A
Sbjct: 542 RALSTGLCLSGKVARACKILD----ELAPMGVILDAACEDMINTLCKAGRIKEA 591
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 145/360 (40%), Gaps = 50/360 (13%)
Query: 53 CNSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVM 112
CN + RE + GL ++ ++ C + +L + A ++ GM +
Sbjct: 306 CNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 113 NSLINMYSKCKRIEAARVLFDTCDE----LDDVSWNSIIAGYVRLGDGFREVFELLARMH 168
N+LI+ +IEAA +L E LD V++N +I GY + GD ++ F L M
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA-KKAFALHDEMM 424
Query: 169 RSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCL 228
G+ + +T S + C ++ VVG G
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFE-----------KVVG---------KGMK 464
Query: 229 TDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSS 288
D V M NT++ G + G A L EM M+ +N T++
Sbjct: 465 PDLV------------MMNTLMDGH-----CAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 289 IVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS------IDDGIRCFN 342
+++ G F R++ ++ ++ ++ D +L+ YS G + D +
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 343 STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARS 402
P L +++ +++ G +N + E A LLR+ + G P++ SV+ +++ A +S
Sbjct: 568 FNPTL--LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 160/399 (40%), Gaps = 28/399 (7%)
Query: 75 FTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDT 134
+TF ++ L+ + G + V G+ I N+L+ +S RIE AR++
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 135 CD----ELDDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDK 190
+ D ++N I++ G E+L M GL + ++ C +
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEG----RASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 191 SLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMY 246
L + +K + L+ + A ++ R + Y
Sbjct: 342 DLE-MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
N +I G+ Q G A++A L EM G+ ++FT++S++ R ++
Sbjct: 401 NILINGYCQH-----GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV-------VSWTSMIAGC 359
++ K ++ D + +L+D + G++D R F+ ++D+ V++ ++ G
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMD---RAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 360 VENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFI 419
GKFE A L+ + G KPD ++++ + + ++ L G + +
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 420 IVQNSQICMYAKSGDIDSARLTFQEIENPDVVSWSEMIC 458
+ N+ + +K+ + + A +E+++ +V C
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFC 611
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 143/347 (41%), Gaps = 21/347 (6%)
Query: 165 ARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAK 224
A M+R + + YT + C + L L + + + +V L+ ++
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV-FGIKPTIVTYNTLVQGFSL 272
Query: 225 TGCLTDAVLVFESFR---YHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLN 280
G + A L+ + + D YN +++ G A E L EM+ +GL
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE-----GRASEVLR---EMKEIGLV 324
Query: 281 CSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRC 340
+++ +++ C GD ++ K+ + + +L+ I+
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 341 FNSTPK----LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCAD 396
+ LD V++ +I G ++G + A +L + M G +P +F +S++ V
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 397 MAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVS 452
R +++ + G+ +++ N+ + + G++D A +E++ NPD V+
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 453 WSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGG 499
++ ++ G EA + M GIKP+HI+ +++ S G
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 29/311 (9%)
Query: 331 FGSIDDGIRCFNSTPKLDVVSWTSMIAGCVEN----GKFETALSLLRQFMASGRKPDEF- 385
G +++ I+CF+ + V T G + GK + + + +G +P F
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 264
Query: 386 --IMSSVMGVCADMAAARSGEQIQGWALKF-GISNFIIVQNSQICMYAKSGDIDSARLTF 442
IM M D+ AAR + +KF G+ + NS I + K G +D F
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFE----EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 443 QEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHG 498
+E+++ PDV++++ +I C G L + M +G+KPN ++ ++ A
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 499 GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFADDPVM 555
G++ + ++++ M++ G+ N T ++D + G L DA R +L G + V
Sbjct: 381 GMMQQAIKFYVDMRR-VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 556 WRALL-GACRVHK----DTMMGKHIADRVIELEPHAAASYVLLYNIYNDAGKEKRALEVR 610
+ AL+ G C + + + GK VI P+ ASY L + + A RALE+
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVI---PN-LASYNALIHGFVKAKNMDRALELL 495
Query: 611 KLMQDQGVKKE 621
++ +G+K +
Sbjct: 496 NELKGRGIKPD 506
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 167/401 (41%), Gaps = 42/401 (10%)
Query: 208 LNSNMVVGTALLDMYAKTGCLTDAVLVFESFR----YHNDFMYNTMIAGFLQRQTVSCGY 263
L + V +++D + K G L D V FE + + YN +I F C +
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF-------CKF 345
Query: 264 AREALGL--FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVG 321
+ +GL + EM+ GL + ++S++V A G + + + + + L +E+
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 322 CSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMA 377
SL+D G++ D R N ++ +VV++T++I G + + + A L +
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 378 SGRKPD---------EFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICM 428
+G P+ F+ + M ++ G I+ L +G FI +C
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG--TFIW----GLCS 519
Query: 429 YAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPN 484
K I++A++ E++ + + ++ ++ G E L + + M I+
Sbjct: 520 LEK---IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF- 543
+T ++ LV + + YF + D+G+ AN T ++D L + ++E A
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 544 --ILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIEL 582
++ G D + +L+ + + + D++ E+
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 159/367 (43%), Gaps = 26/367 (7%)
Query: 62 FREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSK 121
+ + R GL +++T+ ++ NL + +L G++ + +LI+
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 122 CKRIEAARVLF---DTCDELDDV-SWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDY 177
+R++ A LF DT + ++ S+N++I G+V+ + R ELL + G+
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR-ALELLNELKGRGIKPDLL 508
Query: 178 TLGSALKACCVDKSLNC---IGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLV 234
G+ + C + + + + C IK +N ++ T L+D Y K+G T+ + +
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIK----ANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 235 FESFRYHN----DFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM-LGLNCSKFTFSSI 289
+ + + + +I G + + VS +A+ F + GL + F+++
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVS-----KAVDYFNRISNDFGLQANAAIFTAM 619
Query: 290 VKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP---- 345
+ A + Q+ +K L D SL+D G++ + + +
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
KLD++++TS++ G + + A S L + + G PDE + SV+ ++ +
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Query: 406 IQGWALK 412
+Q + +K
Sbjct: 740 LQSYLMK 746
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 157/391 (40%), Gaps = 33/391 (8%)
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCE 273
V AL + G L +A+ F + F G L R G + F +
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR-FAKLGKTDDVKRFFKD 252
Query: 274 MQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGS 333
M G + FT++ ++ GD A R + ++ + L D S++D + G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 334 IDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSS 389
+DD + F + DV+++ ++I + GK L R+ +G KP+ S+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 390 VMGVCADMAAARSGEQIQGWALKFGISNFIIVQN-----SQICMYAKSGDI-DSARLTFQ 443
++ A + G Q + +V N S I K G++ D+ RL +
Sbjct: 373 LVD-----AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 444 EIE---NPDVVSWSEMI--CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHG 498
++ +VV+++ +I C+A EA +F M +G+ PN L A HG
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAER--MKEAEELFGKMDTAGVIPN----LASYNALIHG 481
Query: 499 GLVDEGL-RYFEIMK--KDYGITANVKHSTCIVDLLGRAGRLEDAKRF---ILDSGFADD 552
+ + + R E++ K GI ++ + L ++E AK + + G +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 553 PVMWRALLGACRVHKDTMMGKHIADRVIELE 583
+++ L+ A + G H+ D + EL+
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 196/463 (42%), Gaps = 39/463 (8%)
Query: 89 NLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWN 144
L AI G ++ G I +NSL+N + RI A L D E+ D V++
Sbjct: 115 QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 145 SIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLH 200
+++ G + E L+ RM G T G+ + C D +LN + KM
Sbjct: 175 TLVHGLFQHNKA-SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME- 232
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQR 256
K + +++V+ + ++D K + DA+ +F + F Y+++I+
Sbjct: 233 ----KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL--- 285
Query: 257 QTVSCGYAR--EALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
C Y R +A L +M +N + TF+S++ A G ++ ++ ++++
Sbjct: 286 ----CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCF------NSTPKLDVVSWTSMIAGCVENGKFETA 368
+ SL++ + +D+ + F + P DVV++ ++I G + K
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP--DVVTYNTLINGFCKAKKVVDG 399
Query: 369 LSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICM 428
+ L R G + ++++ + + + + + G+ I+ N+ +
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 429 YAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPN 484
K+G ++ A + F+ ++ PD+ +++ M G + +F +++ G+KP+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 485 HITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCI 527
I +++ GL +E F MK+D + + ++T I
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 139/333 (41%), Gaps = 18/333 (5%)
Query: 247 NTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIH 306
N+++ GF +S EA+ L +M +G TF+++V +
Sbjct: 139 NSLLNGFCHGNRIS-----EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 307 AQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK----LDVVSWTSMIAGCVEN 362
++ K Q D ++++ G D + N K DVV ++++I +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 363 GKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQ 422
+ AL+L + G +PD F SS++ + ++ L+ I+ ++
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 423 NSQICMYAKSGDIDSARLTFQEI----ENPDVVSWSEMICCNAHHGFANEALRIFELMTV 478
NS I +AK G + A F E+ +P++V+++ +I H +EA +IF LM
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 479 SGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLE 538
P+ +T ++ V +G+ F M + G+ N T ++ +A +
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCD 432
Query: 539 DAK---RFILDSGFADDPVMWRALL-GACRVHK 567
+A+ + ++ G + + + LL G C+ K
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 181/450 (40%), Gaps = 65/450 (14%)
Query: 167 MHRSGLDFSDYTLGSALKACCVDKSL----NCIGKMLHVCAIKLDLNSNMVVGTALLDMY 222
M +G++ YT+ + C K L + +G+ A KL + + + L++ +
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR-----AWKLGYEPDTITFSTLVNGF 150
Query: 223 AKTGCLTDAVLVFE---SFRYHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLG 278
G +++AV + + + D + +T+I G + VS EAL L M G
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS-----EALVLIDRMVEYG 205
Query: 279 LNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGI 338
+ T+ ++ G+ + ++ ++N++ ++D GS DD +
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 339 RCFNSTP----KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVC 394
FN K DVV+++S+I G +GK++ +LR+ + PD S+++ V
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 395 ADMAAARSGEQIQGWALKFGISNFIIVQNSQI-------CM------------------- 428
+++ + GI+ I NS I C+
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 429 ---------YAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFEL 475
Y K+ +D F+EI + P+ ++++ ++ G N A +F+
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
M G+ P+ +T +L G +++ L FE M+K +T + I+ + A
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLGIGIYNIIIHGMCNAS 504
Query: 536 RLEDAKRF---ILDSGFADDPVMWRALLGA 562
+++DA + D G D V + ++G
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/492 (19%), Positives = 195/492 (39%), Gaps = 72/492 (14%)
Query: 102 VTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWNSIIAGYVRLGDGF 157
+ G++ ++ M +IN Y + K++ A + +L D +++++++ G+ G
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR-V 156
Query: 158 REVFELLARMHRSGLDFSDYTLGSALKACC----VDKSLNCIGKMLHVCAIKLDLNSNMV 213
E L+ RM T+ + + C V ++L I +M ++ + V
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM-----VEYGFQPDEV 211
Query: 214 VGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTV-----SCGYAREAL 268
+L+ K+G ++ L + FR + + A +Q V G +AL
Sbjct: 212 TYGPVLNRLCKSG---NSALALDLFRKMEE---RNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 269 GLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFY 328
LF EM+M G+ T+SS++ G + G ++ ++ +N+ D +L+D +
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 329 SFFGSIDDGIRCFNS------TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKP 382
G + + +N P D +++ S+I G + A + ++ G +P
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAP--DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 383 DEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
D S ++ G ++ G+ I N+ + + +SG +++A+ F
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 443 QEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVS------------------- 479
QE+ + P VV++ ++ +G N+AL IFE M S
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 480 ----------------GIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKH 523
G+KP+ +T ++ G + E F MK+D + +
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 524 STCIVDLLGRAG 535
+ I LG +G
Sbjct: 564 NILIRAHLGGSG 575
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 126/299 (42%), Gaps = 36/299 (12%)
Query: 346 KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQ 405
K VV ++ +I ++G F+ ALSL + G K D SS++G + G +
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 406 IQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNA 461
+ + I ++ ++ I ++ K G + A+ + E+ PD ++++ +I
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 462 HHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANV 521
+EA ++F+LM G +P+ +T ++ + VD+G+R F + I +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 522 KHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE 581
++T ++ ++G+L AK + M+ + +
Sbjct: 422 TYNTLVLGFC-QSGKLNAAKELFQE-----------------------MVSRGV------ 451
Query: 582 LEPHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISWIEVGSKVHMFLVDD 640
P + +Y +L + D G+ +ALE+ + MQ + GI I + + VDD
Sbjct: 452 --PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 172/383 (44%), Gaps = 35/383 (9%)
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
N +++N ++ F + +S +A +F E+ L + +F++++ +G+
Sbjct: 239 NVYVFNILMNKFCKEGNIS-----DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVS----WTSMIA 357
G ++ Q+ K + D F +L++ +D F+ K ++ +T++I
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 358 GCVENGKFETALSLLRQFMASGRKPDEFIMSS-VMGVC--ADMAAARSGEQIQGWALKFG 414
G NG+ + ++ ++ G +PD + ++ V G C D+ AAR+ I ++ G
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN---IVDGMIRRG 410
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP----DVVSWSEMICCNAHHGFANEAL 470
+ I + I + + GD+++A +E++ D V +S ++C G +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 471 RIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDL 530
R M +GIKP+ +T ++ A G G + + M+ D + + V ++ +++
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV-LLNG 529
Query: 531 LGRAGRLEDAKRFI---LDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELEPHAA 587
L + G++++A + L+ G D + + LL H ++ + R I+ +P
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS------SKRYIQ-KPEIG 582
Query: 588 -----ASYVLLYNIYNDAGKEKR 605
ASY + N + A K+ R
Sbjct: 583 IVADLASYKSIVNELDRASKDHR 605
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 158/387 (40%), Gaps = 52/387 (13%)
Query: 100 VLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD----ELDDVSWNSIIAGYVRLGD 155
+L G ++V N L+N + K I A+ +FD + VS+N++I GY ++G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 156 GFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVG 215
E F L +M +S +T + + A C + ++
Sbjct: 291 -LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG--------------------A 329
Query: 216 TALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQ 275
L D K G + ND ++ T+I G + + +E+ + +M
Sbjct: 330 HGLFDEMCKRGLIP------------NDVIFTTLIHGHSRNGEIDL--MKES---YQKML 372
Query: 276 MLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSID 335
GL ++++V GD A R I + ++ L+ D+ +L+D + G ++
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 336 DGIRCFNSTPK----LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM 391
+ + LD V +++++ G + G+ A LR+ + +G KPD+ + +M
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 392 GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN---- 447
A++G ++ G ++ N + K G + +A + + N
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 448 PDVVSWSEMICCNAHHGFANEALRIFE 474
PD ++++ ++ HH AN + R +
Sbjct: 553 PDDITYNTLL--EGHHRHANSSKRYIQ 577
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFE 474
+ V N + + K G+I A+ F EI P VVS++ +I G +E R+
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA 534
M S +P+ T ++ A +D F+ M K G+ N T ++ R
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK-RGLIPNDVIFTTLIHGHSRN 358
Query: 535 GRLE---DAKRFILDSGFADDPVMWRALLGACRVHKDTMMGKHIADRVIE--LEPHAAAS 589
G ++ ++ + +L G D V++ L+ + D + ++I D +I L P +
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI-T 417
Query: 590 YVLLYNIYNDAGKEKRALEVRKLMQDQGVK 619
Y L + + G + ALE+RK M G++
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 151/366 (41%), Gaps = 53/366 (14%)
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFC--EMQMLGLNCSKFTFSSIVKACVAIGD 298
H+ + + T+I F C AR +L L C +M LG S TF S+V
Sbjct: 112 HDLYSFTTLIDCF-------CRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGF----- 159
Query: 299 FRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAG 358
C + FY S+ D I P +VV + ++I
Sbjct: 160 -----------------------CHVNRFYEAM-SLVDQIVGLGYEP--NVVIYNTIIDS 193
Query: 359 CVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNF 418
E G+ TAL +L+ G +PD +S++ +I ++ GIS
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 419 IIVQNSQICMYAKSGDIDSARLTFQEI----ENPDVVSWSEMICCNAHHGFANEALRIFE 474
+I ++ I +Y K G + A+ + E+ NP++V+++ +I HG +EA ++
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 475 LMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRA 534
++ G PN +T ++ VD+G++ +M +D G+ + + +A
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFTYNTLYQGYCQA 372
Query: 535 GRLEDAKRFI---LDSGFADDPVMWRALL-GACRVHKDTMMGKHIADRVIELEPHAAASY 590
G+ A++ + + G D + LL G C K +GK + R+ +L+
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK---IGKALV-RLEDLQKSKTVVG 428
Query: 591 VLLYNI 596
++ YNI
Sbjct: 429 IITYNI 434
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 206/500 (41%), Gaps = 37/500 (7%)
Query: 141 VSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLH 200
V++N+++ Y + G F+ ELL M G+D T + C + G +L
Sbjct: 269 VTYNTVLHWYCKKGR-FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI-AKGYLLL 326
Query: 201 VCAIKLDLNSNMVVGTALLDMYAKTG-CLTDAVLVFESFRYH---NDFMYNTMIAGFLQR 256
K ++ N V L++ ++ G L + L+ E + N +N +I G
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH--- 383
Query: 257 QTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQC 316
+S G +EAL +F M+ GL S+ ++ ++ +F R + ++ + +
Sbjct: 384 --ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 317 DEFVGCSLVDFYSFFGSIDDGIRCFNSTPK----LDVVSWTSMIAGCVENGKFETALSLL 372
++D G +D+ + N K D+V+++++I G + G+F+TA ++
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 373 RQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKS 432
+ G P+ I S+++ C M + +I + G + N + K+
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 433 GDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
G + A + + + P+ VS+ +I + G +A +F+ MT G P T
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAKRF---IL 545
+L GG + E ++ + + V ++T ++ + ++G L A ++
Sbjct: 622 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT-LLTAMCKSGNLAKAVSLFGEMV 680
Query: 546 DSGFADDPVMWRALL-GACRVHKDTMMGKHIADRVIELEPHAAASYV---LLYNIYND-- 599
D + +L+ G CR GK + + E A + + ++Y + D
Sbjct: 681 QRSILPDSYTYTSLISGLCR------KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 600 --AGKEKRALEVRKLMQDQG 617
AG+ K + R+ M + G
Sbjct: 735 FKAGQWKAGIYFREQMDNLG 754
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 52/408 (12%)
Query: 140 DVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKML 199
DV+ +I+ + F + L+ +M +SG + T + L C ++L
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 200 -HVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR----YHNDFMYNTMIAGFL 254
H+ + +D +++ L+ ++ + L+ R + N+ YNT+I GF
Sbjct: 292 DHMKSKGVD--ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 255 QRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNL 314
G A L EM GL+ + TF++++ ++ G+F+ ++ + K L
Sbjct: 350 NE-----GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 315 QCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDV----VSWTSMIAGCVENGKFETALS 370
E L+D D + + V +++T MI G +NG + A+
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 371 LLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYA 430
LL + G PD S+++ + ++ ++I + G+S
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS-------------- 510
Query: 431 KSGDIDSARLTFQEIENPDVVSWSEMI--CCNAHHGFANEALRIFELMTVSGIKPNHITL 488
P+ + +S +I CC G EA+RI+E M + G +H T
Sbjct: 511 -----------------PNGIIYSTLIYNCCRM--GCLKEAIRIYEAMILEGHTRDHFTF 551
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGR 536
++T+ G V E + M D GI N C+++ G +G
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGE 598
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 128/649 (19%), Positives = 258/649 (39%), Gaps = 52/649 (8%)
Query: 54 NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMN 113
N A+L F E +G+P+ TF ++ CG+ +L E++ + G+ N
Sbjct: 322 NDAANL--FSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 114 SLINMYSKCKRIEAARVLFDTCDEL----DDVSWNSIIAGYVRLGDGFREVFELLARMHR 169
L+++++ IEAA + ++ D V+ +++ + EV ++A M R
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR-KMVAEVEAVIAEMDR 438
Query: 170 SGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGCLT 229
+ + ++++ ++ V++ L K L +LD + A++D+YA+ G
Sbjct: 439 NSIRIDEHSVPVIMQ-MYVNEGLVVQAKALFE-RFQLDCVLSSTTLAAVIDVYAEKGLWV 496
Query: 230 DAVLVFESFR----YHNDFM-YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKF 284
+A VF R ND + YN MI + + + +AL LF M+ G +
Sbjct: 497 EAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAK-----LHEKALSLFKGMKNQGTWPDEC 551
Query: 285 TFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST 344
T++S+ + + ++I A++ + +++ Y G + D + + +
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 345 PKLDV----VSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAA 400
K V V + S+I G E+G E A+ R G + + +++S++ + +
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 401 RSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENP---DVVSWSEMI 457
++ + NS + + A G + A F + DV+S++ M+
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMM 731
Query: 458 CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGI 517
G +EA+ + E M SG+ + + V+ + G + E F M + +
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791
Query: 518 TANVKHSTCIVDLLGRAGRLEDAKRFILDSGFADDPVMWRALLGACRVHKDTMMG--KHI 575
+ + LL + G +A + + P+ A+ + MG +
Sbjct: 792 LLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLF----SAMGLYAYA 847
Query: 576 ADRVIELE----PHAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGI------- 624
+ EL P +Y + Y+ +G AL+ MQ++G+ EP I
Sbjct: 848 LESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGL--EPDIVTQAYLV 905
Query: 625 ------SWIEVGSKVHMFLVDDRSHPMSQLIYSRLEEMLVKINKIEFGD 667
+E +VH L P SQ ++ + + V N+ + D
Sbjct: 906 GIYGKAGMVEGVKRVHSRLTFGELEP-SQSLFKAVRDAYVSANRQDLAD 953
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 182/439 (41%), Gaps = 37/439 (8%)
Query: 144 NSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCA 203
N++I VR+G + + + RSG+ + YTL + A C D + +G L
Sbjct: 204 NALIGSLVRIG-WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 204 IKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR----YHNDFMYNTMIAGFLQRQTV 259
K + ++V L+ Y+ G + +A + + + YNT+I G +
Sbjct: 263 EK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH--- 318
Query: 260 SCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEF 319
G A +F EM GL+ T+ S++ GD ++ + + +++ D
Sbjct: 319 --GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 320 VGCSLVDFYSFFGSIDDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQF 375
S++ ++ G++D + FNS + D V +T +I G G A++L +
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 376 MASGRKPDEFIMSSVM-GVCADMAAARSGEQIQGWALK--FGISNFIIVQNSQICMYAKS 432
+ G D ++++ G+C + + + F S + + C K
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC---KL 493
Query: 433 GDIDSARLTFQEIENP----DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITL 488
G++ +A FQ+++ DVV+++ ++ G + A I+ M I P I+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 489 LGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL----GRAGRLEDAKRFI 544
++ A G + E R ++ M I+ N+K + I + + R+G D + F+
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEM-----ISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 545 ---LDSGFADDPVMWRALL 560
+ GF D + + L+
Sbjct: 609 EKMISEGFVPDCISYNTLI 627
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 129/311 (41%), Gaps = 22/311 (7%)
Query: 242 NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRA 301
ND +++ +I ++Q + + REA F ++ G S ++++ + V IG
Sbjct: 164 NDSVFDLLIRTYVQARKL-----REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 302 GRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPK-----LDVVSWTSMI 356
++ +I + + + + +V+ G ++ + F S + D+V++ ++I
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK-VGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 357 AGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM-GVCADMAAARSGEQIQGWALKFGI 415
+ G E A L+ G P + ++V+ G+C R+ E + L+ G+
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE-VFAEMLRSGL 336
Query: 416 SNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALR 471
S S + K GD+ F ++ + PD+V +S M+ G ++AL
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 472 IFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKK-----DYGITANVKHSTC 526
F + +G+ P+++ ++ G++ + M + D + H C
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 527 IVDLLGRAGRL 537
+LG A +L
Sbjct: 457 KRKMLGEADKL 467
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 186/453 (41%), Gaps = 24/453 (5%)
Query: 95 AIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCDE----LDDVSWNSIIAGY 150
++ G V+ G + N+LI ++ A VL D E D V++NSI+ G
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 151 VRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS 210
R GD +LL +M + +T + + + C D ++ + K + S
Sbjct: 204 CRSGDT-SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKS 261
Query: 211 NMVVGTALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGL 270
++V +L+ K G D L+ + + + N + L V G +EA L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 271 FCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSF 330
+ EM G++ + T+++++ + + + D SL+ Y
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 331 FGSIDDGIRCFNSTPK----LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFI 386
+DDG++ F + K + V+++ ++ G ++GK + A L ++ ++ G PD
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 387 MSSVM-GVCADMAAARS---GEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTF 442
++ G+C + ++ E +Q + GI ++ + I K G ++ A F
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI----VMYTTIIEGMCKGGKVEDAWNLF 496
Query: 443 QEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHG 498
+ P+V++++ MI G +EA + M G PN T ++ A
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 499 GLVDEGLRYFEIMKKDYGITANVKHSTCIVDLL 531
G + + E M K G +A+ ++D+L
Sbjct: 557 GDLTASAKLIEEM-KSCGFSADASSIKMVIDML 588
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 126/303 (41%), Gaps = 14/303 (4%)
Query: 246 YNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQI 305
+NT+I G VS EA+ L M G T++SIV GD +
Sbjct: 161 FNTLIKGLFLEGKVS-----EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 306 HAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTP----KLDVVSWTSMIAGCVE 361
++ ++N++ D F +++D G ID I F K VV++ S++ G +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 362 NGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIV 421
GK+ LL+ ++ P+ + ++ V + ++ + GIS II
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 422 QNSQICMYAKSGDIDSAR----LTFQEIENPDVVSWSEMICCNAHHGFANEALRIFELMT 477
N+ + Y + A L + +PD+V+++ +I ++ +++F ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 478 VSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRL 537
G+ N +T ++ G + F+ M +G+ +V ++D L G+L
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM-VSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 538 EDA 540
E A
Sbjct: 455 EKA 457
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 158/387 (40%), Gaps = 55/387 (14%)
Query: 241 HNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFR 300
HN + N MI F R +C +A LG ++ LG TF++++K G F
Sbjct: 121 HNIYTLNIMINCFC-RCCKTC-FAYSVLG---KVMKLGYEPDTTTFNTLIK-----GLFL 170
Query: 301 AGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNSTPKLDVVSWTSMIAGCV 360
G+ A + LVD R + + DVV++ S++ G
Sbjct: 171 EGKVSEAVV--------------LVD------------RMVENGCQPDVVTYNSIVNGIC 204
Query: 361 ENGKFETALSLLRQFMASGRKPDEFIMSSVM-GVCADMAAARSGEQIQGWALKFGISNFI 419
+G AL LLR+ K D F S+++ +C D + + K GI + +
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSV 263
Query: 420 IVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHGFANEALRIFEL 475
+ NS + K+G + L +++ + P+V++++ ++ G EA +++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 476 MTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAG 535
M GI PN IT ++ + E ++M ++ + ++ T ++
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVK 382
Query: 536 RLEDAK---RFILDSGFADDPVMWRALL-GACRVHKDTMMGKHIADRVIELEPHAAASYV 591
R++D R I G + V + L+ G C+ K K + E+ H V
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI----KLAEELFQEMVSHGVLPDV 438
Query: 592 LLYNIYNDA----GKEKRALEVRKLMQ 614
+ Y I D GK ++ALE+ + +Q
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 107/540 (19%), Positives = 207/540 (38%), Gaps = 62/540 (11%)
Query: 42 FDETPQRSIISCNSPASLLAFREA-RIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSV 100
F E + I+ ++ F+E R LP S F+ + T+ L +
Sbjct: 56 FRERLRSGIVDIKKDDAIALFQEMIRSRPLP-SLVDFSRFFSAIARTKQFNLVLDFCKQL 114
Query: 101 LVTGMDGMIFVMNSLINMYSKC-KRIEAARVLFDTCD---ELDDVSWNSIIAGYVRLGDG 156
+ G+ I+ +N +IN + +C K A VL E D ++N++I G G
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK- 173
Query: 157 FREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGT 216
E L+ RM +G T S + C ++ LDL M
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD----------TSLALDLLRKMEERN 223
Query: 217 ALLDMYAKTGCLTDAVLVFESFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQM 276
D+ F Y+T+I + G A+ LF EM+
Sbjct: 224 VKADV----------------------FTYSTIIDSLCRD-----GCIDAAISLFKEMET 256
Query: 277 LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDD 336
G+ S T++S+V+ G + G + + + + + L+D + G + +
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 337 GIRCFNS------TPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
+ +P +++++ +++ G + A ++L + + PD +S+
Sbjct: 317 ANELYKEMITRGISP--NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 391 M-GVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN-- 447
+ G C + G ++ K G+ + + + + +SG I A FQE+ +
Sbjct: 375 IKGYCM-VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 448 --PDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGL 505
PDV+++ ++ +G +AL IFE + S + + ++ GG V++
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 506 RYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDAK---RFILDSGFADDPVMWRALLGA 562
F + G+ NV T ++ L + G L +A R + + G A + + L+ A
Sbjct: 494 NLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 181/453 (39%), Gaps = 33/453 (7%)
Query: 109 IFVMNSLINMYSKCKRIEAARVLFDTCD-----ELDDVSWNSIIAGYVRLGD--GFREVF 161
+F + ++N Y + ++ A V + EL+ V++NS+I GY +GD G V
Sbjct: 225 VFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVL 284
Query: 162 ELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDM 221
L M G+ + T S +K C + + + K + + G L+D
Sbjct: 285 RL---MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV-LMDG 340
Query: 222 YAKTGCLTDAVLVFESFRYHNDFM-----YNTMIAGFLQRQTVSCGYAREALGLFCEMQM 276
Y +TG + DAV R H++ + NT I L G EA +F M
Sbjct: 341 YCRTGQIRDAV------RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 277 LGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDD 336
L T++++V G ++ Q+C+K + L+ YS G+ D
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 337 GIRCFNSTPK----LDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMG 392
+ + K D +S ++++ + G F A+ L +A G D ++ ++
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 393 VCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----P 448
M ++I F + + Y K G++ A + +E P
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 449 DVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRY- 507
+ ++ +I + N+ + + G+ P T ++T + G++D+
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 508 FEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
FE+++K GIT NV + I + L R ++++A
Sbjct: 635 FEMIEK--GITLNVNICSKIANSLFRLDKIDEA 665
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 147/373 (39%), Gaps = 56/373 (15%)
Query: 83 YCGSTRNLRLGEAIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAAR----VLFDTCDEL 138
+C +R L ++ G ++ G + I SL++ + RI A ++ + E
Sbjct: 116 FCRCSR-LSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 139 DDVSWNSIIAGYVRLGDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM 198
+ V +N++I G + G+ ELL M + GL T + L C + +M
Sbjct: 175 NVVVYNTLIDGLCKNGE-LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 199 LHVCAIKLDLNSNMVVGTALLDMYAKTGCLTDAVLVFESFR------------------- 239
L +K +N ++V TAL+D++ K G L +A +++
Sbjct: 234 LRD-MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 240 --------------------YHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGL 279
+ N YNT+I+GF + + V E + LF M G
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD-----EGMKLFQRMSCEGF 347
Query: 280 NCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIR 339
N FT+++++ +G R I + + + D C L+ G I+ +
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 340 CFN----STPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMS-SVMGVC 394
F+ S + +V++ MI G + K E A L + G KPD + ++G+C
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 395 ADMAAARSGEQIQ 407
+ + E I+
Sbjct: 468 KNGPRREADELIR 480
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 348 DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVM-GVCADMAAARSGEQI 406
+VV + ++I G +NG+ AL LL + G D ++++ G+C + + +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 407 QGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEI----ENPDVVSWSEMICCNAH 462
+ +K I+ ++ + I ++ K G++D A+ ++E+ +P+ V+++ +I
Sbjct: 235 RDM-MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 463 HGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVK 522
HG +A + F+LM G PN +T +++ +VDEG++ F+ M + G A++
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIF 352
Query: 523 HSTCIVDLLGRAGRLEDA 540
++ + G+L A
Sbjct: 353 TYNTLIHGYCQVGKLRVA 370
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 151/355 (42%), Gaps = 27/355 (7%)
Query: 161 FELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKM--LHVCAIKLDLNSNMVVGTAL 218
+L +M + G + S T GS L C+ +N IG L + +K N+VV L
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCL---VNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 219 LDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQRQTVSCGYAREALGLFCEM 274
+D K G L A+ + + YNT++ G G +A + +M
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS-----GRWSDAARMLRDM 237
Query: 275 QMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSI 334
+N TF++++ V G+ ++++ ++ + ++ + S+++ G +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 335 DDGIRCFNSTPKL----DVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSV 390
D + F+ +VV++ ++I+G + + + L ++ G D F +++
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 391 MGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPD- 449
+ + R I W + ++ II + +G+I+SA + F ++ +
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 450 ---VVSWSEMI--CCNAHHGFANEALRIFELMTVSGIKPNHITL-LGVLTACSHG 498
+V+++ MI C A +A +F + V G+KP+ T + +L C +G
Sbjct: 418 YIGIVAYNIMIHGLCKADK--VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 181/452 (40%), Gaps = 46/452 (10%)
Query: 62 FREARIAGLPVSDFTFAG-VLAYCGSTRNLRLGEAIHGSVLVTGMDGMIF----VMNSLI 116
F + R++G S+ V+ YC L E H V G F + +I
Sbjct: 704 FSDLRLSGCEASESVCKSMVVVYC----KLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 117 NMYSKCKRIEAARVLFDTCDE----LDDVSWNSIIAGYVRLG--DGFREVFELLARMHRS 170
Y K K + A + + D +WNS+++ Y + G + R +F M R
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT---MMRD 816
Query: 171 GLDFSDYTLGSALKACCVD---KSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTGC 227
G + ++ L A CVD + L + + L K+ +S ++ +LD +A+ G
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL----MLDAFARAGN 872
Query: 228 LTDAVLVFESFRYHNDF----MYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSK 283
+ + ++ S + +Y MI + + V R+A + EM+
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRV-----RDAEIMVSEMEEANFKVEL 927
Query: 284 FTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDG------ 337
++S++K AI D++ Q++ +I + L+ DE +L+ Y ++G
Sbjct: 928 AIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Query: 338 IRCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADM 397
+R PKLD ++ S+I+ + E A L + ++ G K D ++M + D
Sbjct: 988 MRNLGLDPKLD--TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDS 1045
Query: 398 AAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIENPDV----VSW 453
+ E++ GI + + + Y+ SG+ A +++ +V + +
Sbjct: 1046 GSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Query: 454 SEMICCNAHHGFANEALRIFELMTVSGIKPNH 485
S +I N + M G++P+H
Sbjct: 1106 SSVIDAYLRSKDYNSGIERLLEMKKEGLEPDH 1137
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 415 ISNFIIVQNSQICMYAKSGDIDSARLTFQEIEN----PDVVSWSEMICCNAHHG--FANE 468
+ + + V N+ + +Y++SG A+ + PD++S++ +I G N
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 469 ALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIV 528
A+ + +++ SG++P+ IT +L+ACS +D ++ FE M+ + ++ ++
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEA-HRCQPDLWTYNAMI 339
Query: 529 DLLGRAGRLEDAKRFILD---SGFADDPVMWRALLGACRVHKDTMMGKHIADRVIELE-P 584
+ GR G +A+R ++ GF D V + +LL A ++T K + ++ ++
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 585 HAAASYVLLYNIYNDAGKEKRALEVRKLMQDQGVKKEPGISW 626
+Y + ++Y G+ AL++ K M+ + I++
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 188/483 (38%), Gaps = 65/483 (13%)
Query: 54 NSPASLLAFREARIAGLPVSDFTFAGVLAYCGSTRNLRLGEAIHGSVLVTGMDGMIFVMN 113
N+ + R + L ++ FT+ +L +R+ ++ + G IF N
Sbjct: 183 NTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYN 242
Query: 114 SLINMYSKCKRIEAARVLFDTCDE---LDDVSWNSIIAGYVRLGDGFREVFELLARMHRS 170
L++ +K ++ A +V D D+ ++ +I R+G E L M
Sbjct: 243 MLLDALAKDEK--ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC-DEAVGLFNEMITE 299
Query: 171 GLDFSDY---TLGSAL-KACCVDKSLNCIGKMLHVCAIKLDLNSNMVVGTALLDMYAKTG 226
GL + TL L K VDK++ +M ++ N + LL++ G
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM-----VETGCRPNEYTYSLLLNLLVAEG 354
Query: 227 CLTDAVLVFE-SFRYHNDFMYNTMIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFT 285
L V E S RY +Y+ +L R G+ EA LFC+M + + +
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYS-----YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS 409
Query: 286 FSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNST- 344
+ S++++ G ++ ++I +K + D + ++ I F
Sbjct: 410 YMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 345 ---PKLDVVSWTSMIAGCVENGKFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAAR 401
P D+ ++ +IA G+ + A+++ + S KPD
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD------------------ 511
Query: 402 SGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARLTFQEIE----NPDVVSWSEMI 457
II NS I K+GD+D A + F+E++ NPDVV++S ++
Sbjct: 512 -----------------IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 458 CCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACSHGGLVDEGLRYFEIMKKDYGI 517
C A +FE M V G +PN +T +L G E + + MK+ G+
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ-GL 613
Query: 518 TAN 520
T +
Sbjct: 614 TPD 616
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 186/464 (40%), Gaps = 37/464 (7%)
Query: 95 AIHGSVLVTGMDGMIFVMNSLINMYSKCKRIEAARVLFDTCD-ELDDVSWNSIIAGYVRL 153
+I S++ + + G I +N LI + + ++ L D +++ ++ ++ Y+R
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRS 216
Query: 154 GDGFREVFELLARMHRSGLDFSDYTLGSALKACCVDKSLNCIGKMLHVCAIKLDLNS--- 210
D + + F++ + R G + L A D+ C + D+
Sbjct: 217 RD-YSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---------ACQVFEDMKKRHC 266
Query: 211 --NMVVGTALLDMYAKTGCLTDAVLVFESFRYH----NDFMYNTMIAGFLQRQTVSCGYA 264
+ T ++ + G +AV +F N YNT++ + + V
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD---- 322
Query: 265 REALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQICKKNLQCDEFVGCSL 324
+A+ +F M G +++T+S ++ VA G + +I K+ + + + L
Sbjct: 323 -KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV-VEISKRYMT--QGIYSYL 378
Query: 325 VDFYSFFGSIDDGIRCFN---STP-KLDVVSWTSMIAGCVENGKFETALSLLRQFMASGR 380
V S G + + R F S P K + S+ SM+ GK A+ +L + G
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 381 KPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQNSQICMYAKSGDIDSARL 440
D + ++V + + K G S I N I + + G++D A
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 441 TFQEIE----NPDVVSWSEMICCNAHHGFANEALRIFELMTVSGIKPNHITLLGVLTACS 496
F+E+E PD++S++ +I C +G +EA F+ M G+ P+ +T ++
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 497 HGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
V+ FE M G N+ ++D L + GR +A
Sbjct: 559 KTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAEA 601
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 161/394 (40%), Gaps = 53/394 (13%)
Query: 111 VMNSLINMYSKCKRIEAARVLFDTCDEL----DDVSWNSIIAGYVRLGDGFREVFELLAR 166
++N +N K + +E A L L D +++N++I GY R G E + + R
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRF-IGIDEAYAVTRR 73
Query: 167 MHRSGL--DFSDYT--LGSALKACCVDKSLNCIGKMLHV--------------CAIKL-- 206
M +G+ D + Y + A K +++ L +MLH C KL
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 207 ----------DLN-SNMVVG----TALLDMYAKTGCLTDAVLVFESF--RYHNDFM-YNT 248
D++ + +V G LLD K+G +A+ +F+ R + M YN
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNI 193
Query: 249 MIAGFLQRQTVSCGYAREALGLFCEMQMLGLNCSKFTFSSIVKACVAIGDFRAGRQIHAQ 308
+I G + + V + E++ G + T+++++K G Q+ +
Sbjct: 194 LINGLCKSRRVG-----SVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 309 ICKKNLQCDEFVGCSLVDFYSFFGSIDDGIRCFNS-----TPKLDVVSWTSMIAGCVENG 363
+ K+ D F C++V G ++ C + T D+VS+ +++ ++G
Sbjct: 249 MKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDG 308
Query: 364 KFETALSLLRQFMASGRKPDEFIMSSVMGVCADMAAARSGEQIQGWALKFGISNFIIVQN 423
+ LL + G KPD++ + ++ ++ E+ + G+ ++ N
Sbjct: 309 NLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCN 368
Query: 424 SQICMYAKSGDIDSARLTFQEIENPDVVSWSEMI 457
I K+G +D A F +E D +++ ++
Sbjct: 369 CLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVV 402
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 27/235 (11%)
Query: 323 SLVDFYSFFGSIDDGI----RCFNSTPKLDVVSWTSMIAGCVENGKFETALSLLRQFMAS 378
+L+ Y+ F ID+ R + + DV ++ S+I+G +N L L + + S
Sbjct: 53 TLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHS 112
Query: 379 GRKPDEFIMSSVMGVCADMAAARSGE-------QIQGWALKFGISNFIIVQNSQICMYAK 431
G PD + +++M + R GE I L GI + I+ ++ +C K
Sbjct: 113 GLSPDMWSYNTLMSCYFKLG--RHGEAFKILHEDIHLAGLVPGIDTYNILLDA-LC---K 166
Query: 432 SGDIDSARLTFQEIEN---PDVVSWSEMI---CCNAHHGFANEALRIFELMTVSGIKPNH 485
SG D+A F+ +++ P++++++ +I C + G + +R + SG PN
Sbjct: 167 SGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELK---KSGYTPNA 223
Query: 486 ITLLGVLTACSHGGLVDEGLRYFEIMKKDYGITANVKHSTCIVDLLGRAGRLEDA 540
+T +L +++GL+ F MKK+ G T + + +V L + GR E+A
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKE-GYTFDGFANCAVVSALIKTGRAEEA 277