Miyakogusa Predicted Gene

Lj0g3v0101239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101239.1 Non Chatacterized Hit- tr|I0YU80|I0YU80_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30.22,0.0000001,no description,Six-bladed beta-propeller,
TolB-like; YWTD domain,NULL,CUFF.5678.1
         (405 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07060.1 | Symbols: emb1974 | NHL domain-containing protein |...   365   e-101
AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase f...    56   4e-08

>AT3G07060.1 | Symbols: emb1974 | NHL domain-containing protein |
           chr3:2232760-2236913 FORWARD LENGTH=774
          Length = 774

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/410 (45%), Positives = 263/410 (64%), Gaps = 8/410 (1%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           +D IG  PGFEDG FESAK+ RP G+ Y  +EDCLY VDSENHAIR+A++ +R +ET++P
Sbjct: 304 VDSIGCFPGFEDGDFESAKMLRPTGTLYDEAEDCLYIVDSENHAIRRANINSRVLETVYP 363

Query: 61  ASVTSKGGGVWNWIMNKLGL--ESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIID 118
             V  K GG+W+WIM K+GL  +     + + +SE FD++SL FPWH+LK  D++L +I+
Sbjct: 364 -KVIKKTGGLWSWIMEKMGLGKDDDTTVDADTKSEEFDARSLLFPWHILKRDDESLLVIN 422

Query: 119 RRFQTLWTMDFSSGKINEVLEG-SRILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLE 177
           + F  LW ++F+SG+I EV+EG S+I+EICGQ I + LS+L+ +P +W  ++       +
Sbjct: 423 KSFSKLWIINFASGEIEEVVEGFSKIIEICGQSITEKLSVLEHMPSNWLQQQTAAIASFK 482

Query: 178 GIPRSDLLSSLTTLQNHIFICDTVGQRIVKVNEESKVCVNFQLCNLGILGLPYWLNSPLE 237
             P + LLSS T L + I + D   QR++K+N +S  C + Q  N GILGLPYWL  PLE
Sbjct: 483 EQPSASLLSSFTKLGDDIVMTDIACQRVLKLNRDSGACSSIQFSNSGILGLPYWLFIPLE 542

Query: 238 TYYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQESCIWRQARGAATE 297
             + + NG+    + H Q    LPGKI I+L++ +P   ELVEP+QESCIWRQ RGA +E
Sbjct: 543 RVFNLANGVQEAHLSHTQELRLLPGKISIRLNIEIPPCTELVEPIQESCIWRQTRGAISE 602

Query: 298 ISGMDDVPGSLEKVGAAQQWYDELDYLAA--PKPESEMTVDVDNLDKKSV--VEDEGVRI 353
            S         EK+G +QQWYDELD LA     PE+    + ++++   V   ED  + I
Sbjct: 603 FSSAGSAVEPSEKIGVSQQWYDELDSLAKEIANPEAAEEEEEEDVNPSEVDREEDGRIHI 662

Query: 354 SCGVCTSPGTSEVIVYAVLYCKLRRDPNSNDGNRVKHAARILDILSSKRS 403
            C V TSPG+SE+IVYA LY +L R+  +    + + A +I  IL   R+
Sbjct: 663 DCPVKTSPGSSELIVYAALYLRLARNEETESATQEELARKIAKILKPVRN 712


>AT1G56500.1 | Symbols:  | haloacid dehalogenase-like hydrolase
           family protein | chr1:21159775-21167092 FORWARD
           LENGTH=1055
          Length = 1055

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 4   IGSS--PGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETL 58
           IGSS   GF+DG FE A   RP G  Y+A ++ LY  D+ENHA+R+ D     V+TL
Sbjct: 604 IGSSGEEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNERVQTL 660