Miyakogusa Predicted Gene

Lj0g3v0101069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101069.1 Non Chatacterized Hit- tr|I1JYB3|I1JYB3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24206 PE,90.74,0,no
description,Ribonuclease II/R; seg,NULL; MITOTIC CONTROL PROTEIN
DIS3,NULL; RIBONUCLEASE,NULL; RN,CUFF.5669.1
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein ...   621   e-178
AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein ...   598   e-171
AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein | chr...   141   8e-34
AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease...    70   2e-12

>AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7615881 REVERSE LENGTH=933
          Length = 933

 Score =  621 bits (1601), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 297/368 (80%), Positives = 326/368 (88%), Gaps = 2/368 (0%)

Query: 1   MEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEI 60
           ME+ +D RPSKRK+IY EHKPMSEIT+GLHRGIYHQGKLRVNR+NP+EAYVGSESIG+EI
Sbjct: 201 MEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSESIGEEI 260

Query: 61  IIYGRSNMNRAFDGDIVAVELLPQDQWHEEKSLSIRGXXXXXXXXXVHLAPNSADDAPRT 120
           IIYGRSNMNRAFDGDIVAVELLP+DQW +EK+LSI           VHLAP++ DDAPRT
Sbjct: 261 IIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALSI-AEEDDEEDDTVHLAPDNVDDAPRT 319

Query: 121 IPQQGSTGG-INAVCNRPSGVVVGIIKRNWHSYCGSLEPMPLPAGSGGVAYALFVSKDRR 179
                 T G  NA   RPSG VVG+I+RNWHSYCGSLEPM LPAGSGG A+ALFVSKDRR
Sbjct: 320 SNLSHETSGDKNAAPVRPSGRVVGVIRRNWHSYCGSLEPMSLPAGSGGTAHALFVSKDRR 379

Query: 180 IPKIRLQTRQLENLLDKRIIVAVDSWDRQSRYPSGHYVRTIGDIGDRDTESEVVLIENDI 239
           IPKIR+ TRQL+NLLD RI+VAVDSWDRQSRYPSGHYVR IG IGD++TE+EVVLIEND+
Sbjct: 380 IPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEVVLIENDV 439

Query: 240 NTRPFSSQVLACLPPLPWSVSSEDFSKPIRQDLRHLRVFSVDPPGCTDIDDALHCYALPN 299
           +  PFSSQVLACLPPLPWSVSSED S P+RQDLRHL VFSVDPPGC DIDDALHC +LPN
Sbjct: 440 DYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPN 499

Query: 300 GNFEVGVHIADVTNFVHPGTPLDDEASQRGTSVYLVERRIDMLPKPLTEDICSLRSDVER 359
           GNFE+GVHIADVTNFVHPGTPLDDEAS+RGTSVYLVERRIDMLPKPLTEDICSLR+DVER
Sbjct: 500 GNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVER 559

Query: 360 LAFSVIWK 367
           LAFSVIW+
Sbjct: 560 LAFSVIWE 567


>AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7616242 REVERSE LENGTH=1012
          Length = 1012

 Score =  598 bits (1543), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/402 (73%), Positives = 326/402 (81%), Gaps = 36/402 (8%)

Query: 1   MEEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEI 60
           ME+ +D RPSKRK+IY EHKPMSEIT+GLHRGIYHQGKLRVNR+NP+EAYVGSESIG+EI
Sbjct: 246 MEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSESIGEEI 305

Query: 61  IIYGRSNMNRAFDGDIVAVELLPQDQWHEEKSLSIRGXXXXXXXXXVHLAPNSADDAPRT 120
           IIYGRSNMNRAFDGDIVAVELLP+DQW +EK+LSI           VHLAP++ DDAPRT
Sbjct: 306 IIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALSI-AEEDDEEDDTVHLAPDNVDDAPRT 364

Query: 121 IPQQGSTGG-INAVCNRPSGVVVGIIKRNWHSYCGSLEPMPLPAGSGGVAYALFVSKDRR 179
                 T G  NA   RPSG VVG+I+RNWHSYCGSLEPM LPAGSGG A+ALFVSKDRR
Sbjct: 365 SNLSHETSGDKNAAPVRPSGRVVGVIRRNWHSYCGSLEPMSLPAGSGGTAHALFVSKDRR 424

Query: 180 IPKIRLQTRQLENLLDKRIIVAVDSWDRQSRYPSGHYVRTIGDIGDRDTESE-------- 231
           IPKIR+ TRQL+NLLD RI+VAVDSWDRQSRYPSGHYVR IG IGD++TE+E        
Sbjct: 425 IPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEVRDHINLF 484

Query: 232 --------------VVLIENDINTRPFSSQVLACLPPLPWSVSSEDFSKPIRQDLRHLRV 277
                         VVLIEND++  PFSSQVLACLPPLPWSVSSED S P+RQDLRHL V
Sbjct: 485 DSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLV 544

Query: 278 FSVDPPGCTDIDDALHCYALPNGNFEVGV------------HIADVTNFVHPGTPLDDEA 325
           FSVDPPGC DIDDALHC +LPNGNFE+GV            +IADVTNFVHPGTPLDDEA
Sbjct: 545 FSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHKYDYIADVTNFVHPGTPLDDEA 604

Query: 326 SQRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIWK 367
           S+RGTSVYLVERRIDMLPKPLTEDICSLR+DVERLAFSVIW+
Sbjct: 605 SKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWE 646


>AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein |
           chr1:29192188-29195963 REVERSE LENGTH=1055
          Length = 1055

 Score =  141 bits (355), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 137/280 (48%), Gaps = 39/280 (13%)

Query: 123 QQGSTGGINAVC--------NRPSGVVVGIIKRN--------------WHSYCGSLEP-- 158
           Q+G+   ++ +C         RP+G VV +++++              W  Y  S +P  
Sbjct: 297 QKGNCSAVDKLCGILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLDVKGWIHYKES-DPKR 355

Query: 159 MPLPAGSGGVAYALFVSKDRRIPK-----------IRLQTRQLENLLDKRIIVA-VDSWD 206
              P       Y   +  D R PK           IR +   L+  L+  ++ A +  W 
Sbjct: 356 CKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLPGSIRARLENLDPNLEAELVAAQIVDWG 415

Query: 207 RQSRYPSGHYVRTIGDIGDRDTESEVVLIENDINTRPFSSQVLACLPPLPWSVSSEDFSK 266
             S +P        G   + + +   +L +N +    FS   L  LP +PW V  E+  +
Sbjct: 416 EGSPFPVAQITHLFGRGSELEPQINAILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQR 475

Query: 267 PIRQDLRHLRVFSVDPPGCTDIDDALHCYALPNGNFEVGVHIADVTNFVHPGTPLDDEAS 326
             R+DLR L V ++DP   TD+DDAL   +LP G F VGVHIADV+ FV P T LD EA 
Sbjct: 476 --RKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADVSYFVLPETALDTEAR 533

Query: 327 QRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIW 366
            R TSVYL++R+I MLP  L+E++ SL    +RLAFS++W
Sbjct: 534 FRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILW 573



 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%)

Query: 2   EEVEDLRPSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEII 61
           E  + +  S ++ I+S H  +  +T  L +G   +   RVN +N  EAY   + +  +I+
Sbjct: 134 ELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTDIL 193

Query: 62  IYGRSNMNRAFDGDIVAVELLPQDQWHEEKSL 93
           I G    +RA +GD V ++L P   W + K  
Sbjct: 194 INGNVCQSRAVEGDTVVIKLDPLSLWPKMKGF 225


>AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease
           II/R family protein | chr5:454902-459063 FORWARD
           LENGTH=803
          Length = 803

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 54/94 (57%)

Query: 261 SEDFSKPIRQDLRHLRVFSVDPPGCTDIDDALHCYALPNGNFEVGVHIADVTNFVHPGTP 320
           S D     R DL HL+V+++D     ++DDAL    L +G  ++ +H+AD   +V PG+ 
Sbjct: 391 SSDIDAVRRIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSK 450

Query: 321 LDDEASQRGTSVYLVERRIDMLPKPLTEDICSLR 354
           +D EA +RGTSV+L      M P+ L  +  SLR
Sbjct: 451 VDREARRRGTSVFLPTATYPMFPEKLAMEGMSLR 484