Miyakogusa Predicted Gene
- Lj0g3v0101039.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101039.1 tr|A8J1B8|A8J1B8_CHLRE ARF-GAP protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_149716 PE=4
SV=1,79.59,3e-17,ARFGAP,Arf GTPase activating protein;
ArfGap/RecO-like zinc finger,NULL; ArfGap,Arf GTPase
activatin,CUFF.5794.1
(55 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37550.2 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 | chr2:1575... 108 9e-25
AT2G37550.1 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 | chr2:1575... 108 9e-25
AT3G53710.2 | Symbols: AGD6 | ARF-GAP domain 6 | chr3:19903730-1... 105 5e-24
AT3G53710.1 | Symbols: AGD6 | ARF-GAP domain 6 | chr3:19903730-1... 105 5e-24
AT4G17890.2 | Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-99... 78 1e-15
AT4G17890.1 | Symbols: AGD8 | ARF-GAP domain 8 | chr4:9937121-99... 77 2e-15
AT5G46750.1 | Symbols: AGD9 | ARF-GAP domain 9 | chr5:18969950-1... 76 5e-15
AT2G35210.2 | Symbols: RPA, AGD10, MEE28 | root and pollen arfga... 74 2e-14
AT2G35210.1 | Symbols: RPA, AGD10, MEE28 | root and pollen arfga... 74 2e-14
AT4G05330.1 | Symbols: AGD13 | ARF-GAP domain 13 | chr4:2720772-... 72 9e-14
AT3G07940.1 | Symbols: | Calcium-dependent ARF-type GTPase acti... 69 9e-13
AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22401244-2... 65 9e-12
AT3G17660.1 | Symbols: AGD15 | ARF-GAP domain 15 | chr3:6037717-... 65 1e-11
AT5G54310.1 | Symbols: NEV, AGD5 | ARF-GAP domain 5 | chr5:22057... 65 1e-11
AT4G21160.4 | Symbols: ZAC | Calcium-dependent ARF-type GTPase a... 65 1e-11
AT4G21160.2 | Symbols: ZAC | Calcium-dependent ARF-type GTPase a... 65 1e-11
AT4G21160.3 | Symbols: ZAC | Calcium-dependent ARF-type GTPase a... 65 1e-11
AT4G21160.1 | Symbols: ZAC, AGD12 | Calcium-dependent ARF-type G... 65 1e-11
AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 | chr1:3616905-36... 61 2e-10
AT5G61980.1 | Symbols: AGD1 | ARF-GAP domain 1 | chr5:24894472-2... 55 7e-09
AT5G13300.1 | Symbols: SFC, VAN3, AGD3 | ARF GTPase-activating p... 55 1e-08
>AT2G37550.2 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 |
chr2:15755544-15757456 REVERSE LENGTH=456
Length = 456
Score = 108 bits (269), Expect = 9e-25, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 51/55 (92%)
Query: 1 MAASRRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
MAA+RRLR LQS P NK+CVDCSQKNPQWAS+SYGIFMCLECSGKHRGLG H+SF
Sbjct: 1 MAAARRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISF 55
>AT2G37550.1 | Symbols: ASP1, AGD7 | ARF-GAP domain 7 |
chr2:15755544-15757456 REVERSE LENGTH=456
Length = 456
Score = 108 bits (269), Expect = 9e-25, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 51/55 (92%)
Query: 1 MAASRRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
MAA+RRLR LQS P NK+CVDCSQKNPQWAS+SYGIFMCLECSGKHRGLG H+SF
Sbjct: 1 MAAARRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISF 55
>AT3G53710.2 | Symbols: AGD6 | ARF-GAP domain 6 |
chr3:19903730-19905419 REVERSE LENGTH=459
Length = 459
Score = 105 bits (263), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 1 MAASRRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
MAA+R+LR LQS P NK+CVDC+QKNPQWASVSYGIFMCLECSGKHRGLG H+SF
Sbjct: 1 MAATRQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISF 55
>AT3G53710.1 | Symbols: AGD6 | ARF-GAP domain 6 |
chr3:19903730-19905419 REVERSE LENGTH=459
Length = 459
Score = 105 bits (263), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 1 MAASRRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
MAA+R+LR LQS P NK+CVDC+QKNPQWASVSYGIFMCLECSGKHRGLG H+SF
Sbjct: 1 MAATRQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISF 55
>AT4G17890.2 | Symbols: AGD8 | ARF-GAP domain 8 |
chr4:9937121-9938988 FORWARD LENGTH=384
Length = 384
Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 7 LRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
R+L+S NK+C DCS KNP WASV+YGIF+C++CS HR LG H+SF
Sbjct: 16 FRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISF 64
>AT4G17890.1 | Symbols: AGD8 | ARF-GAP domain 8 |
chr4:9937121-9939146 FORWARD LENGTH=413
Length = 413
Score = 77.4 bits (189), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 7 LRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
R+L+S NK+C DCS KNP WASV+YGIF+C++CS HR LG H+SF
Sbjct: 16 FRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISF 64
>AT5G46750.1 | Symbols: AGD9 | ARF-GAP domain 9 |
chr5:18969950-18971817 REVERSE LENGTH=402
Length = 402
Score = 75.9 bits (185), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 7 LRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
R+L+S NK+C DCS KNP WASV YGIF+C++CS HR LG H+SF
Sbjct: 13 FRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISF 61
>AT2G35210.2 | Symbols: RPA, AGD10, MEE28 | root and pollen arfgap
| chr2:14836206-14837884 FORWARD LENGTH=371
Length = 371
Score = 74.3 bits (181), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 7 LRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
++L++ NKIC DC+ KNP WASV+YGIF+C++CS HR LG H+SF
Sbjct: 13 FKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
>AT2G35210.1 | Symbols: RPA, AGD10, MEE28 | root and pollen arfgap
| chr2:14836206-14837946 FORWARD LENGTH=395
Length = 395
Score = 74.3 bits (181), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 7 LRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLSF 55
++L++ NKIC DC+ KNP WASV+YGIF+C++CS HR LG H+SF
Sbjct: 13 FKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISF 61
>AT4G05330.1 | Symbols: AGD13 | ARF-GAP domain 13 |
chr4:2720772-2722679 REVERSE LENGTH=336
Length = 336
Score = 71.6 bits (174), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 2 AASRRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
+ RR+R+L + P N++C DC +P+WAS + G+F+CL+C G HR LG H+S
Sbjct: 13 SGKRRIRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHIS 65
>AT3G07940.1 | Symbols: | Calcium-dependent ARF-type GTPase
activating protein family | chr3:2529542-2531368
FORWARD LENGTH=385
Length = 385
Score = 68.6 bits (166), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 6 RLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
RL +L PGNK C DC P+W S+S G+F+C++CSG HR LG H+S
Sbjct: 49 RLEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHIS 97
>AT1G60860.1 | Symbols: AGD2 | ARF-GAP domain 2 |
chr1:22401244-22407639 REVERSE LENGTH=776
Length = 776
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 10 LQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
L+ +PGN C +C+ +P WAS++ G+ MC+ECSG HR LG H+S
Sbjct: 473 LREIPGNNTCAECNAPDPDWASLNLGVLMCIECSGVHRNLGVHIS 517
>AT3G17660.1 | Symbols: AGD15 | ARF-GAP domain 15 |
chr3:6037717-6039092 FORWARD LENGTH=232
Length = 232
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 4 SRRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
S+ L L P N+ C DC K P+WASV+ GIF+C++CSG HR LG H+S
Sbjct: 16 SKILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHIS 66
>AT5G54310.1 | Symbols: NEV, AGD5 | ARF-GAP domain 5 |
chr5:22057262-22061066 REVERSE LENGTH=483
Length = 483
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 2 AASRRLRE-LQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
A R++ E L P N+ C DC K P+WASV+ GIF+C++CSG HR LG H+S
Sbjct: 13 ARHRKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHIS 66
>AT4G21160.4 | Symbols: ZAC | Calcium-dependent ARF-type GTPase
activating protein family | chr4:11284694-11286532
FORWARD LENGTH=337
Length = 337
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 5 RRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
RR+R+L + N++C DC +P+WAS + G+F+CL+C G HR LG H+S
Sbjct: 16 RRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHIS 65
>AT4G21160.2 | Symbols: ZAC | Calcium-dependent ARF-type GTPase
activating protein family | chr4:11284694-11286532
FORWARD LENGTH=337
Length = 337
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 5 RRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
RR+R+L + N++C DC +P+WAS + G+F+CL+C G HR LG H+S
Sbjct: 16 RRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHIS 65
>AT4G21160.3 | Symbols: ZAC | Calcium-dependent ARF-type GTPase
activating protein family | chr4:11284694-11286532
FORWARD LENGTH=337
Length = 337
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 5 RRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
RR+R+L + N++C DC +P+WAS + G+F+CL+C G HR LG H+S
Sbjct: 16 RRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHIS 65
>AT4G21160.1 | Symbols: ZAC, AGD12 | Calcium-dependent ARF-type
GTPase activating protein family |
chr4:11284694-11286532 FORWARD LENGTH=337
Length = 337
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 5 RRLRELQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
RR+R+L + N++C DC +P+WAS + G+F+CL+C G HR LG H+S
Sbjct: 16 RRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHIS 65
>AT1G10870.1 | Symbols: AGD4 | ARF-GAP domain 4 |
chr1:3616905-3623612 REVERSE LENGTH=775
Length = 775
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 10 LQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
L+ +PGN C +C+ P WAS++ G+ +C++CSG HR LG H+S
Sbjct: 473 LRGLPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHIS 517
>AT5G61980.1 | Symbols: AGD1 | ARF-GAP domain 1 |
chr5:24894472-24899178 FORWARD LENGTH=828
Length = 828
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 10 LQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
L + GN+ C DC P WAS++ G+ +C+ECSG HR LG H+S
Sbjct: 504 LTRVLGNERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHIS 548
>AT5G13300.1 | Symbols: SFC, VAN3, AGD3 | ARF GTPase-activating
protein | chr5:4255923-4262018 REVERSE LENGTH=827
Length = 827
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 10 LQSMPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGGHLS 54
L+ + GN C DC P WAS++ G+ +C+ECSG HR LG H+S
Sbjct: 507 LRKVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHIS 551