Miyakogusa Predicted Gene

Lj0g3v0100899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100899.1 Non Chatacterized Hit- tr|I1L444|I1L444_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,46.67,2e-19,LTP_2,Bifunctional inhibitor/plant lipid transfer
protein/seed storage helical domain; no descriptio,gene.g7666.t1.1
         (128 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18280.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    70   4e-13
AT1G73560.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    60   4e-10
AT1G73550.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    53   4e-08
AT1G73550.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    53   5e-08

>AT1G18280.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:6294403-6295207 FORWARD LENGTH=180
          Length = 180

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 46/72 (63%)

Query: 1   MQKLLPCQPFLKXXXXXXXXXXVPLNEMATNEVDCLCSVMNNPQLLLSINVSKEDAMKLP 60
           +QKL+PCQP+L           +PLNE+   +  CLC+V NN  +L S+N++KE+A+ LP
Sbjct: 42  IQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALDLP 101

Query: 61  GACDIEVDISKC 72
            AC  + D+S C
Sbjct: 102 KACGAKADVSLC 113


>AT1G73560.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:27649768-27650456 REVERSE LENGTH=147
          Length = 147

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 1   MQKLLPCQPFLKXXXXXXXXXXV-PLNEMATNEVDCLCSVMNNPQLLLSINVSKEDAMKL 59
           +QKLLPCQP++             P+ E+   +  CLC   NNP++L ++N++KE+A+ L
Sbjct: 34  LQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKENALLL 93

Query: 60  PGACDIEVDISKCN 73
           P AC +  D+S C+
Sbjct: 94  PKACGVNPDVSLCS 107


>AT1G73550.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:27647806-27648536 REVERSE LENGTH=152
          Length = 152

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%)

Query: 3   KLLPCQPFLKXXXXXXXXXXVPLNEMATNEVDCLCSVMNNPQLLLSINVSKEDAMKLPGA 62
           KL+PCQP++            P+ ++A  +V CLC+   +P LL  + ++KE+A+K+  +
Sbjct: 38  KLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKILDS 97

Query: 63  CDIEVDISKCN 73
           C I  D S CN
Sbjct: 98  CGINHDPSVCN 108


>AT1G73550.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:27648024-27648536 REVERSE LENGTH=134
          Length = 134

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%)

Query: 3   KLLPCQPFLKXXXXXXXXXXVPLNEMATNEVDCLCSVMNNPQLLLSINVSKEDAMKLPGA 62
           KL+PCQP++            P+ ++A  +V CLC+   +P LL  + ++KE+A+K+  +
Sbjct: 38  KLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKILDS 97

Query: 63  CDIEVDISKCN 73
           C I  D S CN
Sbjct: 98  CGINHDPSVCN 108