Miyakogusa Predicted Gene

Lj0g3v0100739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100739.1 Non Chatacterized Hit- tr|D8LPN6|D8LPN6_ECTSI
Putative uncharacterized protein OS=Ectocarpus
silicul,46.94,2e-18,UPF0016,Uncharacterised protein family UPF0016;
seg,NULL; TRANSMEMBRANE PROTEIN HTP-1 RELATED,Unchar,CUFF.5644.1
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13590.1 | Symbols:  | Uncharacterized protein family (UPF001...   231   2e-61
AT4G13590.2 | Symbols:  | Uncharacterized protein family (UPF001...   229   1e-60
AT1G64150.1 | Symbols:  | Uncharacterized protein family (UPF001...    91   6e-19
AT5G36290.2 | Symbols:  | Uncharacterized protein family (UPF001...    74   6e-14
AT5G36290.1 | Symbols:  | Uncharacterized protein family (UPF001...    74   6e-14
AT1G25520.1 | Symbols:  | Uncharacterized protein family (UPF001...    67   7e-12
AT1G68650.1 | Symbols:  | Uncharacterized protein family (UPF001...    64   6e-11

>AT4G13590.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr4:7901369-7903792 REVERSE LENGTH=359
          Length = 359

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/201 (63%), Positives = 155/201 (77%), Gaps = 3/201 (1%)

Query: 29  CACSSKTTSLTTFRGRQKLRLQLAHGIIRAQASNVGVGSGDHGSSNEKDSQNV-FERNPI 87
           C  SS+  +    R R++ +L L  G  R +AS+ GVGSG +    E  SQ+   +++P 
Sbjct: 36  CPKSSRKPTFLPLRCRRRPKLDLLWGKFRVRASDAGVGSGSYSGGEEDGSQSSSLDQSPA 95

Query: 88  NDSSPKIVKPPNRIPYPISIALVLFGCALVFSLIASLKGGPTAVLEAIAKSGFTAAFTLI 147
             S  + +KP    PY +SIALVL  C LVFSLI  +KGGP++VL A+AKSGFTAAF+LI
Sbjct: 96  TSS--ESLKPRGPFPYSLSIALVLLSCGLVFSLITFVKGGPSSVLAAVAKSGFTAAFSLI 153

Query: 148 FVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSVPAQFQTTLPI 207
           FVSEIGDKTFFIAALLAMQY+K LVLLGS+GAL+LM+ILSVVIG+IFQSVPAQFQTTLPI
Sbjct: 154 FVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPAQFQTTLPI 213

Query: 208 GEYAAVTLLLFFGLKSIKDAW 228
           GEYAA+ LL+FFGLKSIKDAW
Sbjct: 214 GEYAAIALLMFFGLKSIKDAW 234


>AT4G13590.2 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr4:7901369-7903792 REVERSE LENGTH=359
          Length = 359

 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 127/201 (63%), Positives = 155/201 (77%), Gaps = 3/201 (1%)

Query: 29  CACSSKTTSLTTFRGRQKLRLQLAHGIIRAQASNVGVGSGDHGSSNEKDSQNV-FERNPI 87
           C  SS+  +    + R++ +L L  G  R +AS+ GVGSG +    E  SQ+   +++P 
Sbjct: 36  CPKSSRKPTFLPCKCRRRPKLDLLWGKFRVRASDAGVGSGSYSGGEEDGSQSSSLDQSPA 95

Query: 88  NDSSPKIVKPPNRIPYPISIALVLFGCALVFSLIASLKGGPTAVLEAIAKSGFTAAFTLI 147
             S  + +KP    PY +SIALVL  C LVFSLI  +KGGP++VL A+AKSGFTAAF+LI
Sbjct: 96  TSS--ESLKPRGPFPYSLSIALVLLSCGLVFSLITFVKGGPSSVLAAVAKSGFTAAFSLI 153

Query: 148 FVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSVPAQFQTTLPI 207
           FVSEIGDKTFFIAALLAMQY+K LVLLGS+GAL+LM+ILSVVIG+IFQSVPAQFQTTLPI
Sbjct: 154 FVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPAQFQTTLPI 213

Query: 208 GEYAAVTLLLFFGLKSIKDAW 228
           GEYAA+ LL+FFGLKSIKDAW
Sbjct: 214 GEYAAIALLMFFGLKSIKDAW 234


>AT1G64150.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr1:23809047-23812579 REVERSE LENGTH=370
          Length = 370

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 5/95 (5%)

Query: 138 SGFTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSV 197
           SGF +AF LIF SE+GDKTFFIAALLA +     V +G+ GAL +M+I+SVV+GR F  V
Sbjct: 157 SGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYV 216

Query: 198 ----PAQF-QTTLPIGEYAAVTLLLFFGLKSIKDA 227
               P +F  T LPI + AAV LL++FG+ ++ DA
Sbjct: 217 DEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDA 251


>AT5G36290.2 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr5:14302977-14304972 FORWARD LENGTH=293
          Length = 293

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 8/103 (7%)

Query: 132 LEAIAKSGFTA---AFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSV 188
           L+A A S F A   +F++I V+EIGD+TF IAAL+AM++ K  VL G++ AL +M+ILS 
Sbjct: 74  LDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILST 133

Query: 189 VIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWKSS 231
            +GRI  ++ ++  T       AA  L  FFGL+ +  AW+S+
Sbjct: 134 GLGRIVPNLISRKHT-----NSAATVLYAFFGLRLLYIAWRST 171


>AT5G36290.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr5:14302977-14304972 FORWARD LENGTH=293
          Length = 293

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 8/103 (7%)

Query: 132 LEAIAKSGFTA---AFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSV 188
           L+A A S F A   +F++I V+EIGD+TF IAAL+AM++ K  VL G++ AL +M+ILS 
Sbjct: 74  LDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILST 133

Query: 189 VIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDAWKSS 231
            +GRI  ++ ++  T       AA  L  FFGL+ +  AW+S+
Sbjct: 134 GLGRIVPNLISRKHT-----NSAATVLYAFFGLRLLYIAWRST 171


>AT1G25520.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr1:8962324-8964173 FORWARD LENGTH=230
          Length = 230

 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 7/93 (7%)

Query: 139 GFTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSVP 198
           GFT +  + FVSEIGDKTFF AA+LAM+Y + LVL G + AL +M+ILS  +G    ++ 
Sbjct: 7   GFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLI 66

Query: 199 AQFQTTLPIGEYAAVTLLLF-FGLKSIKDAWKS 230
           ++  T      +   TLL F FGL S+ D +K 
Sbjct: 67  SRKWT------HHITTLLFFGFGLWSLWDGFKE 93


>AT1G68650.1 | Symbols:  | Uncharacterized protein family (UPF0016)
           | chr1:25775825-25777683 FORWARD LENGTH=228
          Length = 228

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 7/93 (7%)

Query: 139 GFTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSVP 198
           GFT +  + F+SEIGDKTFF AA+LAM+Y + LVL G + AL +M+ILS  +G    ++ 
Sbjct: 7   GFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLI 66

Query: 199 AQFQTTLPIGEYAAVTLLLF-FGLKSIKDAWKS 230
           ++  T      +   T L F FGL S+ D +K 
Sbjct: 67  SRKWT------HHITTFLFFGFGLWSLWDGFKE 93