Miyakogusa Predicted Gene

Lj0g3v0100629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100629.1 Non Chatacterized Hit- tr|B9SEW6|B9SEW6_RICCO
Multiprotein-bridging factor, putative OS=Ricinus
comm,87.27,2e-19,ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1
(MULTIPROTEIN BRIDGING FACTOR 1),NULL; HTH_CROC1,Helix-,CUFF.5638.1
         (55 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42680.1 | Symbols: MBF1A, ATMBF1A | multiprotein bridging fa...   101   1e-22
AT3G58680.1 | Symbols: MBF1B, ATMBF1B | multiprotein bridging fa...    96   7e-21
AT3G24500.1 | Symbols: MBF1C, ATMBF1C | multiprotein bridging fa...    72   7e-14

>AT2G42680.1 | Symbols: MBF1A, ATMBF1A | multiprotein bridging
           factor 1A | chr2:17774972-17776116 FORWARD LENGTH=142
          Length = 142

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 1   MQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRGNK 55
           MQAR DKKLTQ+QLAQIINEKPQVIQEYESGKAIPNQQ++ KLERALGAKLRG K
Sbjct: 88  MQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142


>AT3G58680.1 | Symbols: MBF1B, ATMBF1B | multiprotein bridging
           factor 1B | chr3:21707367-21708625 FORWARD LENGTH=142
          Length = 142

 Score = 95.5 bits (236), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query: 1   MQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRGNK 55
           MQAR +KKLTQ+QLA +INEKPQVIQEYESGKAIPNQQ++ KLERALGAKLRG K
Sbjct: 88  MQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142


>AT3G24500.1 | Symbols: MBF1C, ATMBF1C | multiprotein bridging
           factor 1C | chr3:8918755-8919201 FORWARD LENGTH=148
          Length = 148

 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 45/52 (86%)

Query: 2   QARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRG 53
           +AR++KK++QA LA+ INE+ QV+QEYE+GKA+PNQ V+ K+E+ LG KLRG
Sbjct: 93  KARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRG 144