Miyakogusa Predicted Gene

Lj0g3v0100539.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100539.1 tr|B7U9S1|B7U9S1_CARAS AT5G10210-like protein
OS=Cardaminopsis arenosa PE=4 SV=1,35.2,7e-18,C2,C2 calcium-dependent
membrane targeting; no description,NULL; Protein kinase C conserved
region,C,CUFF.5625.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10210.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: C2 calcium...    91   4e-19
AT5G65030.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    82   2e-16

>AT5G10210.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: C2
           calcium-dependent membrane targeting
           (InterPro:IPR000008); BEST Arabidopsis thaliana protein
           match is: unknown protein (TAIR:AT5G65030.1); Has 1807
           Blast hits to 1807 proteins in 277 species: Archae - 0;
           Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
           Viruses - 0; Other Eukaryotes - 339 (source: NCBI
           BLink). | chr5:3206236-3206829 FORWARD LENGTH=197
          Length = 197

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 32/206 (15%)

Query: 3   LPSFSFEIRIIQAQNVGIT---KNLFARLYLPAGNNRSSIQLNSKMVSSKSN---PCWNE 56
           + S  FE++I++A+NV +      LF R YL AGNN S I+LN+  + S+S+     WN+
Sbjct: 7   IRSLKFEVKIVEARNVELKSSPTTLFVRFYLHAGNN-SKIELNTPEIRSRSDCEVISWNQ 65

Query: 57  SFSLDCSCSEEFLETLQKESLVLELRQSSAATKVLRRIFGGSRLVGKCEIPWKAILESQN 116
           SF L+C  +E  +E L+++S+V ELR+    T  L++ +  S LVG+ +I WK+++E+  
Sbjct: 66  SFGLECQGNETAVEELKQQSVVFELRRRK-TTPFLKK-WSKSELVGRGKIFWKSVIETDG 123

Query: 117 MEFKEWVKID--------SCDGDSSTTFSVPEVQVEIKIKVVASEKKDNSSKRLNKWDEC 168
           ME + +V +D         CD           + ++I +KV AS  K  ++KR+   D C
Sbjct: 124 MEIERFVVMDETKDHVLEDCDKHKP-------LLLKIALKVQAS--KIVNTKRVE--DLC 172

Query: 169 GCKQGHDHHAWCSAEDYHVFSFGAAL 194
            CK        C+  DY  F    AL
Sbjct: 173 ECKDCRT----CNCVDYEAFVVACAL 194


>AT5G65030.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G10210.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:25975697-25976305
           REVERSE LENGTH=202
          Length = 202

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 14/203 (6%)

Query: 2   ELPSFSFEIRIIQAQNVGI---TKNLFARLYLPAGNNRSSIQLNSKMVSSKSNPC-WNES 57
           +L S   ++RI++A+NV I      LF R YL AG+NR  I++N++ +SSKS+   W++S
Sbjct: 7   KLRSLKCQVRIVEARNVEIKSQASTLFVRFYLSAGHNR-KIEVNTRELSSKSDQLMWDQS 65

Query: 58  FSLDCSCSEEFLETLQKESLVLELRQSSAATKVLRRIFGGSRLVGKCEIPWKAILESQNM 117
           F L+C   E  ++ L+++ +V ELR+   +T    R    S +VG+ E+ W+++ ES  M
Sbjct: 66  FGLECQGDEAAVKELKQQRVVFELRRKKIST--FLRKSSKSEVVGRGEVSWESVFESPGM 123

Query: 118 EFKEWVKIDSCDGDSSTTFSVPE--VQVEIKIKVVASEKKDNS-SKRLNKWDECGCKQGH 174
           E +  V +    G+S       E  + ++I +KV A E+ +    K   K ++  C    
Sbjct: 124 EIERLVVM----GESKNWVLEDERPLLLKIALKVQALEEMEKMLIKNDKKTEKLCCVCSS 179

Query: 175 DHHAWCSAEDYHVFSFGAALEAF 197
                CS  DY  F+   AL+  
Sbjct: 180 RDCGSCSCLDYEAFALVCALDCI 202