Miyakogusa Predicted Gene

Lj0g3v0099929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0099929.1 tr|B3S4L3|B3S4L3_TRIAD Predicted protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_59127 PE=4
SV=1,36.3,9e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.5616.1
         (372 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02065.3 | Symbols:  | P-loop containing nucleoside triphosph...    70   2e-12
AT3G02065.2 | Symbols:  | P-loop containing nucleoside triphosph...    70   2e-12

>AT3G02065.3 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr3:359136-360734
           FORWARD LENGTH=505
          Length = 505

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)

Query: 146 DGVKGRN-EQRFPVSGEPVCLMCGRYGEYICNETDDDVCSMECKSELLE 193
           D VK ++ +QR P+SGEP C++C RYGEYIC+ET+DDVCS+ECK  LL 
Sbjct: 12  DVVKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLR 60


>AT3G02065.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr3:359136-360734
           FORWARD LENGTH=505
          Length = 505

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)

Query: 146 DGVKGRN-EQRFPVSGEPVCLMCGRYGEYICNETDDDVCSMECKSELLE 193
           D VK ++ +QR P+SGEP C++C RYGEYIC+ET+DDVCS+ECK  LL 
Sbjct: 12  DVVKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLR 60