Miyakogusa Predicted Gene

Lj0g3v0099779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0099779.1 tr|Q42867|Q42867_LUPAL TRNA
nucleotidyltransferase OS=Lupinus albus GN=CCA1 PE=2
SV=1,68.18,1e-17,TRNA NUCLEOTIDYLTRANSFERASE,NULL;
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY
MEMBER,NULL;,CUFF.5600.1
         (138 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22660.2 | Symbols:  | Polynucleotide adenylyltransferase fam...    76   5e-15
AT1G22660.1 | Symbols:  | Polynucleotide adenylyltransferase fam...    76   6e-15

>AT1G22660.2 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr1:8017410-8021538 FORWARD LENGTH=603
          Length = 603

 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 22  LRSSAPSILGPGILQSRAHQSKHLETARMCLFGVWIHFVDLRREEYTDNSCIPSEQTFRT 81
           L S    + G  +++    QSKHLETA++ ++  WI FV+LR EEYT+NS IP+   F T
Sbjct: 149 LSSRDEEVQGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTENSRIPT-MKFGT 207

Query: 82  PEEDVYRRDLTINSL 96
            ++D +RRDLTINSL
Sbjct: 208 AKDDAFRRDLTINSL 222


>AT1G22660.1 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr1:8017410-8021538 FORWARD LENGTH=605
          Length = 605

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 22  LRSSAPSILGPGILQSRAHQSKHLETARMCLFGVWIHFVDLRREEYTDNSCIPSEQTFRT 81
           L S    + G  +++    QSKHLETA++ ++  WI FV+LR EEYT+NS IP+   F T
Sbjct: 149 LSSRDEEVQGDTVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTENSRIPT-MKFGT 207

Query: 82  PEEDVYRRDLTINSL 96
            ++D +RRDLTINSL
Sbjct: 208 AKDDAFRRDLTINSL 222