Miyakogusa Predicted Gene

Lj0g3v0098889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098889.1 Non Chatacterized Hit- tr|I3S6S9|I3S6S9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,87.05,0,seg,NULL;
Methyltransf_8,Methyltransferase-related; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Methyl,CUFF.5562.1
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40530.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   186   2e-47
AT5G40530.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   185   3e-47

>AT5G40530.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:16234551-16235972 FORWARD LENGTH=301
          Length = 301

 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 87/140 (62%), Positives = 101/140 (72%), Gaps = 3/140 (2%)

Query: 52  FLEKMRARLSGGHFRMLNEKLYTCTGKEALDYFQEDPSLFNLYHAGYQTQMSNWPEQPVN 111
           FL+ +R RLSGG FRMLNEKLYTC+GKEALDYF+EDP +F++YH GYQ QMSNWPE PVN
Sbjct: 64  FLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNWPELPVN 123

Query: 112 VIIKWLRKQNPSFVVADFGCGEALIANSVKNTVFSLDLVSNDPKVIACDMANVCPSTCKA 171
            II WL   + S VVADFGCG+A IA SVKN VFS DLVS +P VIACDM+N    +   
Sbjct: 124 SIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTSLESSSV 183

Query: 172 IVLCKCWKVTSVALDNHSSY 191
            V   C  +      N+SSY
Sbjct: 184 DVAVFCLSLMGT---NYSSY 200


>AT5G40530.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:16234551-16236100 FORWARD LENGTH=287
          Length = 287

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 87/140 (62%), Positives = 101/140 (72%), Gaps = 3/140 (2%)

Query: 52  FLEKMRARLSGGHFRMLNEKLYTCTGKEALDYFQEDPSLFNLYHAGYQTQMSNWPEQPVN 111
           FL+ +R RLSGG FRMLNEKLYTC+GKEALDYF+EDP +F++YH GYQ QMSNWPE PVN
Sbjct: 64  FLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNWPELPVN 123

Query: 112 VIIKWLRKQNPSFVVADFGCGEALIANSVKNTVFSLDLVSNDPKVIACDMANVCPSTCKA 171
            II WL   + S VVADFGCG+A IA SVKN VFS DLVS +P VIACDM+N    +   
Sbjct: 124 SIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTSLESSSV 183

Query: 172 IVLCKCWKVTSVALDNHSSY 191
            V   C  +      N+SSY
Sbjct: 184 DVAVFCLSLMGT---NYSSY 200