Miyakogusa Predicted Gene
- Lj0g3v0098329.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0098329.2 tr|I0Z0T7|I0Z0T7_9CHLO Acetolactate synthase
OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,45,1e-16,Ubiquitin-like,NULL; UBX,UBX; no description,NULL;
Domain present in ubiquitin-regulatory prote,UBX;,CUFF.5499.2
(98 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23040.1 | Symbols: | Ubiquitin-like superfamily protein | c... 120 2e-28
AT4G11740.1 | Symbols: SAY1 | Ubiquitin-like superfamily protein... 118 9e-28
AT4G00752.1 | Symbols: | UBX domain-containing protein | chr4:3... 111 8e-26
AT4G10790.1 | Symbols: | UBX domain-containing protein | chr4:6... 61 2e-10
AT1G14570.4 | Symbols: | UBX domain-containing protein | chr1:4... 49 1e-06
AT1G14570.3 | Symbols: | UBX domain-containing protein | chr1:4... 49 1e-06
AT1G14570.1 | Symbols: | UBX domain-containing protein | chr1:4... 48 1e-06
AT1G14570.2 | Symbols: | UBX domain-containing protein | chr1:4... 48 1e-06
>AT4G23040.1 | Symbols: | Ubiquitin-like superfamily protein |
chr4:12075672-12078622 REVERSE LENGTH=525
Length = 525
Score = 120 bits (301), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/94 (60%), Positives = 72/94 (76%)
Query: 5 KEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSYRIV 64
KE LP+EPP G+E IT+ VR+P+G R RRF K+DKLQ LFDFIDI VKP +YR+V
Sbjct: 432 KEASLPQEPPAGEENAITLQVRLPDGTRHGRRFFKSDKLQSLFDFIDICRVVKPNTYRLV 491
Query: 65 KSYPRCAYSINDSSSTLNEVGLSNKNEALFLELI 98
+ YPR A+ + SSTLN++GL++K EALFLELI
Sbjct: 492 RPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 525
>AT4G11740.1 | Symbols: SAY1 | Ubiquitin-like superfamily protein |
chr4:7071955-7075256 FORWARD LENGTH=564
Length = 564
Score = 118 bits (295), Expect = 9e-28, Method: Composition-based stats.
Identities = 57/96 (59%), Positives = 73/96 (76%)
Query: 3 DKKEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSYR 62
D KE LPKEP +E IT+++RMP+G R RRFLK+DKLQ LF+FIDI VKP +YR
Sbjct: 469 DAKEASLPKEPQADEENAITLLIRMPDGTRRGRRFLKSDKLQTLFNFIDIARVVKPNTYR 528
Query: 63 IVKSYPRCAYSINDSSSTLNEVGLSNKNEALFLELI 98
+V+ YPR A+ +S STLN++GL++K EALFLELI
Sbjct: 529 LVRPYPRHAFGDGESESTLNDLGLTSKQEALFLELI 564
>AT4G00752.1 | Symbols: | UBX domain-containing protein |
chr4:317771-320793 REVERSE LENGTH=469
Length = 469
Score = 111 bits (278), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 4 KKEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSYRI 63
+++ LP EP +E IT++VRMP+ +R RRFLK+DKL+ LFDFID G VKPG+YR+
Sbjct: 374 ERKAALPIEPSGENEDAITLLVRMPDSSRHGRRFLKSDKLKYLFDFIDAAGLVKPGTYRV 433
Query: 64 VKSYPRCAYSINDSSSTLNEVGLSNKNEALFLELI 98
V+ YPR A+SI D + T E+ L+NK EALFLEL+
Sbjct: 434 VRPYPRRAFSIQDGALTFEELSLTNKQEALFLELL 468
>AT4G10790.1 | Symbols: | UBX domain-containing protein |
chr4:6640752-6643035 REVERSE LENGTH=480
Length = 480
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 1 MLDKKEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGS 60
M +K + L +EP G + V ++VR PNG R R F K+Q L+D++D G +
Sbjct: 385 MRQEKALALGEEPEKGPD-VTQVLVRFPNGERKGRMFKSETKIQTLYDYVDSLGLLDTEE 443
Query: 61 YRIVKSYPRCAYSINDSSSTLNEVGLSNKNEALFLEL 97
Y ++ ++PR Y + S +L + GL + +LF+E+
Sbjct: 444 YSLITNFPRTVYGRDKESMSLKDAGL-HPQASLFIEI 479
>AT1G14570.4 | Symbols: | UBX domain-containing protein |
chr1:4983770-4987192 FORWARD LENGTH=447
Length = 447
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 9 LPKEPPLGDEKVITIV-VRMPNGNRCERRFLKTDKLQLLFDFI--DIHGAVKPGSYRIVK 65
LP+EP GD + V +R+PNG R +R FLKTD +QLL+ F + + + ++ +
Sbjct: 356 LPEEPKGGDRSLQCRVGIRLPNGQRLQRNFLKTDTIQLLWSFCYSQLEESERKKPLKLTQ 415
Query: 66 SYPRCAYSIN-DSSSTLNEVGLSN 88
+ P + ++ +S+ TL + G++N
Sbjct: 416 AIPGESKTLEYESNLTLEQSGVAN 439
>AT1G14570.3 | Symbols: | UBX domain-containing protein |
chr1:4983770-4987192 FORWARD LENGTH=447
Length = 447
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 9 LPKEPPLGDEKVITIV-VRMPNGNRCERRFLKTDKLQLLFDFI--DIHGAVKPGSYRIVK 65
LP+EP GD + V +R+PNG R +R FLKTD +QLL+ F + + + ++ +
Sbjct: 356 LPEEPKGGDRSLQCRVGIRLPNGQRLQRNFLKTDTIQLLWSFCYSQLEESERKKPLKLTQ 415
Query: 66 SYPRCAYSIN-DSSSTLNEVGLSN 88
+ P + ++ +S+ TL + G++N
Sbjct: 416 AIPGESKTLEYESNLTLEQSGVAN 439
>AT1G14570.1 | Symbols: | UBX domain-containing protein |
chr1:4983770-4987192 FORWARD LENGTH=468
Length = 468
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 9 LPKEPPLGDEKVITIV-VRMPNGNRCERRFLKTDKLQLLFDFI--DIHGAVKPGSYRIVK 65
LP+EP GD + V +R+PNG R +R FLKTD +QLL+ F + + + ++ +
Sbjct: 377 LPEEPKGGDRSLQCRVGIRLPNGQRLQRNFLKTDTIQLLWSFCYSQLEESERKKPLKLTQ 436
Query: 66 SYPRCAYSIN-DSSSTLNEVGLSN 88
+ P + ++ +S+ TL + G++N
Sbjct: 437 AIPGESKTLEYESNLTLEQSGVAN 460
>AT1G14570.2 | Symbols: | UBX domain-containing protein |
chr1:4983770-4987192 FORWARD LENGTH=468
Length = 468
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 9 LPKEPPLGDEKVITIV-VRMPNGNRCERRFLKTDKLQLLFDFI--DIHGAVKPGSYRIVK 65
LP+EP GD + V +R+PNG R +R FLKTD +QLL+ F + + + ++ +
Sbjct: 377 LPEEPKGGDRSLQCRVGIRLPNGQRLQRNFLKTDTIQLLWSFCYSQLEESERKKPLKLTQ 436
Query: 66 SYPRCAYSIN-DSSSTLNEVGLSN 88
+ P + ++ +S+ TL + G++N
Sbjct: 437 AIPGESKTLEYESNLTLEQSGVAN 460