Miyakogusa Predicted Gene

Lj0g3v0097989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097989.1 Non Chatacterized Hit- tr|I1NJ85|I1NJ85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22152 PE,96,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; P-loop containing nucleoside
triphosphate hydrolase,CUFF.5529.1
         (260 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50480.1 | Symbols: THFS | 10-formyltetrahydrofolate syntheta...   280   7e-76

>AT1G50480.1 | Symbols: THFS | 10-formyltetrahydrofolate synthetase
           | chr1:18702064-18704687 FORWARD LENGTH=634
          Length = 634

 Score =  280 bits (716), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 134/173 (77%), Positives = 143/173 (82%)

Query: 88  SKTVRKLQVLSPVPADIDIANSVEPVHISEIAKDLNLSPNHYDLYGKYKAKVLLSVLDEL 147
           S + RKL+V+SPVPADIDIANSVEP+HISEIAKDLN++P HYDLYGKYKAKVLLS  DEL
Sbjct: 2   SSSTRKLEVVSPVPADIDIANSVEPLHISEIAKDLNINPLHYDLYGKYKAKVLLSAFDEL 61

Query: 148 QGSEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCVRQPSQGPTFGIKXX 207
           QG EDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTC+RQPSQGPTFGIK  
Sbjct: 62  QGQEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCLRQPSQGPTFGIKGG 121

Query: 208 XXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRFFHESTQSDKALL 260
                YSQVIPMDEFNLHLTGDIH               R FHE++QSDKAL 
Sbjct: 122 AAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRIFHETSQSDKALF 174