Miyakogusa Predicted Gene
- Lj0g3v0097549.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0097549.1 CUFF.5449.1
(524 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 416 e-116
AT2G25370.1 | Symbols: | RING/U-box superfamily protein | chr2:... 325 3e-89
AT2G25370.2 | Symbols: | RING/U-box superfamily protein | chr2:... 300 2e-81
AT2G25360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 284 9e-77
AT5G37560.1 | Symbols: | RING/U-box superfamily protein | chr5:... 282 4e-76
AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 279 4e-75
AT2G21420.1 | Symbols: | IBR domain containing protein | chr2:9... 270 2e-72
AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 250 2e-66
AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 246 2e-65
AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 229 3e-60
AT3G45470.1 | Symbols: | IBR domain containing protein | chr3:1... 228 7e-60
AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 226 2e-59
AT2G19610.2 | Symbols: | RING/U-box superfamily protein | chr2:... 222 5e-58
AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 216 3e-56
AT3G45460.1 | Symbols: | IBR domain containing protein | chr3:1... 215 8e-56
AT2G19610.1 | Symbols: | RING/U-box superfamily protein | chr2:... 207 2e-53
AT5G07640.1 | Symbols: | RING/U-box superfamily protein | chr5:... 197 1e-50
AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc... 190 2e-48
AT4G19670.2 | Symbols: | RING/U-box superfamily protein | chr4:... 169 5e-42
AT4G19670.1 | Symbols: | RING/U-box superfamily protein | chr4:... 169 5e-42
AT3G45555.1 | Symbols: | RING/U-box protein | chr3:16712368-167... 163 2e-40
AT3G45510.1 | Symbols: | RING/U-box protein | chr3:16690790-166... 151 1e-36
AT3G53690.1 | Symbols: | RING/U-box superfamily protein | chr3:... 137 2e-32
AT3G45560.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 129 4e-30
AT3G14250.1 | Symbols: | RING/U-box superfamily protein | chr3:... 125 8e-29
AT3G45490.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 91 3e-18
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 84 2e-16
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 84 2e-16
AT3G43180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 69 9e-12
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | c... 68 2e-11
AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily pro... 67 2e-11
AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing prot... 66 6e-11
AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily pro... 66 7e-11
AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing prot... 65 1e-10
AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily pro... 64 4e-10
AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily p... 62 8e-10
AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-1... 57 3e-08
AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily p... 52 7e-07
>AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24252226-24254710 FORWARD
LENGTH=655
Length = 655
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/399 (48%), Positives = 271/399 (67%), Gaps = 15/399 (3%)
Query: 138 GEGCSSGDPGA-------VFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEV 190
GEG S + A ++R+YFKGLVS++ G+ VV G G+AICD+ DN+L E+
Sbjct: 126 GEGSSRVNTAAGKINGNLLYRLYFKGLVSDENGKGKMTDVV-SGFGVAICDQRDNLLFEM 184
Query: 191 SKPLLGTETSKKISEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLAR 250
PL+ S++ +E KALI A+ + +K +V++CD P+ Q+++GKW Q+K++
Sbjct: 185 KGPLIDNGMSRQGAELKALIRGLTEALKLGIKHIVFFCDSYPIFQYVTGKWMAKQKKISL 244
Query: 251 LVNEVYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVIC 310
L++++ + + F+ LVAR+D+K+A+KLAR++I+S T + + LKE C IC
Sbjct: 245 LLDDLQSIMQHFSSYQHVLVARNDVKFAYKLARESILSMVTPHEDPRQAKAVLKEECAIC 304
Query: 311 LEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPH 370
D FSVD C+HR+CF CVKQHVEVKLL GM PKCPH+GCK+EL+ ++C K L
Sbjct: 305 FNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMAPKCPHDGCKSELVIDACGKLLTP 364
Query: 371 KLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVI-----GAQKQCIKCR 425
KL + QQR E +IPVTE++YCPYPRCSALMSKT++ E +K+++ ++C++CR
Sbjct: 365 KLSKLWQQRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRCVECR 424
Query: 426 GFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCY 485
G FC CKVPWH ++C YKKL+P PPA+D+KLKSLA +WRQC KC HMIEL++GC
Sbjct: 425 GLFCVDCKVPWHGNLSCTEYKKLHPEPPADDVKLKSLANNKMWRQCGKCQHMIELSQGCN 484
Query: 486 HMTCRCGYEFCYQCGAGWKDKKATC--SCPLWAEEYLVR 522
H+TCRCG+EFCY CG GW TC CP W EEY+ R
Sbjct: 485 HITCRCGHEFCYNCGGGWNKIMGTCLNRCPTWNEEYITR 523
>AT2G25370.1 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=603
Length = 603
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 230/373 (61%), Gaps = 14/373 (3%)
Query: 138 GEGCSSGDP---GAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPL 194
GEG S V+R+ FKGLV+ + V + E+ V G G+AICDE DN+L E+ + L
Sbjct: 139 GEGSSPAAKFMDNVVYRLCFKGLVNYEAVADDVEKAVKAGFGVAICDEKDNLLHEIKESL 198
Query: 195 LGTETSKKISEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNE 254
E S++ E AL+ + + + ++ VV YCD + Q + G+ +++K+ LV E
Sbjct: 199 RDIEISRRGVEIMALVRGLSESFDLGMRNVVIYCDDDWIYQSIIGRGK-SKKKIDHLVEE 257
Query: 255 VYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTR-SAEAGSSTKSLKETCVICLED 313
V + K + LVAR+D+K+AF+LAR+AI S +AE G ETC I E+
Sbjct: 258 VQGILEKMACIDAVLVARNDVKFAFRLAREAIGRNSVDVNAEQG-------ETCGIFFEE 310
Query: 314 TDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLI 373
TD+ F + C HR+CF CVKQHV+VKL G P C GCK +L E C K L KLI
Sbjct: 311 TDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGTEPTCLEYGCKFKLTLERCSKVLTLKLI 370
Query: 374 ETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICK 433
E +Q+ E SIP E+IYCPYP CS LMSKTE+ S+ + + C+KC G FC CK
Sbjct: 371 EMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTEL--SSEADLSNVRTCVKCCGLFCIDCK 428
Query: 434 VPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGY 493
VP H ++ YKKL+P+P +DLKLKSLA +WRQCVKC HMIEL+ GC HMTCRCGY
Sbjct: 429 VPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDKMWRQCVKCRHMIELSHGCNHMTCRCGY 488
Query: 494 EFCYQCGAGWKDK 506
EFCY+CG W+ +
Sbjct: 489 EFCYECGIEWQKR 501
>AT2G25370.2 | Symbols: | RING/U-box superfamily protein |
chr2:10806700-10809794 FORWARD LENGTH=546
Length = 546
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/373 (45%), Positives = 217/373 (58%), Gaps = 41/373 (10%)
Query: 138 GEGCSSGDP---GAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPL 194
GEG S V+R+ FKGLV+ + V + E+ V G G+AICDE DN+L E+ + L
Sbjct: 109 GEGSSPAAKFMDNVVYRLCFKGLVNYEAVADDVEKAVKAGFGVAICDEKDNLLHEIKESL 168
Query: 195 LGTETSKKISEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNE 254
E S++ E ALI GK +++K+ LV E
Sbjct: 169 RDIEISRRGVEIMALIIG-------------------------RGK---SKKKIDHLVEE 200
Query: 255 VYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTR-SAEAGSSTKSLKETCVICLED 313
V + K + LVAR+D+K+AF+LAR+AI S +AE G ETC I E+
Sbjct: 201 VQGILEKMACIDAVLVARNDVKFAFRLAREAIGRNSVDVNAEQG-------ETCGIFFEE 253
Query: 314 TDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLI 373
TD+ F + C HR+CF CVKQHV+VKL G P C GCK +L E C K L KLI
Sbjct: 254 TDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGTEPTCLEYGCKFKLTLERCSKVLTLKLI 313
Query: 374 ETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICK 433
E +Q+ E SIP E+IYCPYP CS LMSKTE+ S+ + + C+KC G FC CK
Sbjct: 314 EMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTEL--SSEADLSNVRTCVKCCGLFCIDCK 371
Query: 434 VPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGY 493
VP H ++ YKKL+P+P +DLKLKSLA +WRQCVKC HMIEL+ GC HMTCRCGY
Sbjct: 372 VPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDKMWRQCVKCRHMIELSHGCNHMTCRCGY 431
Query: 494 EFCYQCGAGWKDK 506
EFCY+CG W+ +
Sbjct: 432 EFCYECGIEWQKR 444
>AT2G25360.1 | Symbols: | RING/U-box superfamily protein |
chr2:10804249-10805761 FORWARD LENGTH=373
Length = 373
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 197/305 (64%), Gaps = 14/305 (4%)
Query: 208 ALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNP 267
ALI + + +++VV YCD L Q++ G+ + ++K+ LV+E LL + TY +
Sbjct: 2 ALIRGLRESFDLGIRQVVVYCDDQLLYQYIVGRGKI-KKKVVHLVDEFQLLLEEMTYTDA 60
Query: 268 RLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQ-FFSVDGCQ 326
L+A +D+ +AFKLAR+AIVS+ AE C IC E+T+ + FF+ + C
Sbjct: 61 DLIALNDVNFAFKLAREAIVSRDDVKAE----------ICSICFEETEGERMFFTTEKCV 110
Query: 327 HRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIP 386
HR+CF CVKQ+VEVKLL G VP C +GCK +L ESC K L +LIE +Q+ E SIP
Sbjct: 111 HRHCFPCVKQYVEVKLLSGTVPTCLDDGCKFKLTLESCSKVLTLELIEMWKQKMKEDSIP 170
Query: 387 VTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYK 446
E+IYCPYP CS LMSKTE+ S++ + + C+KC G FC CKVP H+ ++C YK
Sbjct: 171 AAERIYCPYPNCSMLMSKTEL--SSESDLSNDRSCVKCCGLFCIDCKVPSHSDLSCAEYK 228
Query: 447 KLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGWKDK 506
KL+ +P ++LKLKSLA WRQC C HMIEL+ C HMTCRCGY+FCYQC WK+
Sbjct: 229 KLHHDPLVDELKLKSLAKDKKWRQCKMCRHMIELSHACNHMTCRCGYQFCYQCEVEWKND 288
Query: 507 KATCS 511
+ TCS
Sbjct: 289 QKTCS 293
>AT5G37560.1 | Symbols: | RING/U-box superfamily protein |
chr5:14921986-14923790 FORWARD LENGTH=444
Length = 444
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 206/357 (57%), Gaps = 14/357 (3%)
Query: 147 GAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSKKISEA 206
V+++YFKGLVS + + + +V G G+AICDEADN+ ++K L +++ ++
Sbjct: 33 NVVYKLYFKGLVSGETAT-DKKAIVKVGFGVAICDEADNLFYGMNKSLYEAVINREEADI 91
Query: 207 KALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCN 266
ALI +I +K VV CD + Q + G+ QQK L+ EV L+ +
Sbjct: 92 LALITGLYESIHRGVKNVVICCDDRQIYQTIIGREK-PQQKNVHLLEEVQRLRGRLASTG 150
Query: 267 PRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGCQ 326
LVA D +A +LA DA+V +T+ TC IC + TD D C
Sbjct: 151 TVLVATRDDNFALRLAIDALVK----------ATQEKPLTCSICSDKTDAEHMLLNDKCL 200
Query: 327 HRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIP 386
HR+CFSCVKQ V+VKL G+VP C +GCK+EL ESC L KLIE +++ E IP
Sbjct: 201 HRHCFSCVKQQVKVKLRSGIVPPCLEDGCKSELTLESCSMVLTPKLIEMWKRKMEEDLIP 260
Query: 387 VTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYK 446
EKIYCPY CS LMSKTE+ ++ + CIKC FC CKVPWH+ ++C YK
Sbjct: 261 DAEKIYCPYRSCSMLMSKTELSREAEQ--SNVRACIKCSELFCIDCKVPWHSDLSCADYK 318
Query: 447 KLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGW 503
+++ D+ LK LA +WRQC +C HMIEL EGC H+TCRCGYEFCY+CG W
Sbjct: 319 RIHSERLVNDMMLKVLANDQMWRQCSECKHMIELTEGCNHITCRCGYEFCYRCGHKW 375
>AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16729989-16731511 REVERSE LENGTH=408
Length = 408
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 221/378 (58%), Gaps = 15/378 (3%)
Query: 135 KAFGEGCSSGDPGAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPL 194
K G S P + +R+YFKGLVSE+ V +L G G+AICD+ DN+L ++ + +
Sbjct: 14 KHVGRVSSEIKPDS-YRLYFKGLVSEETVE------LLAGFGVAICDKDDNLLFQMKEQV 66
Query: 195 LGTETSKKISEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNE 254
+ + E AL A+ + + + Y D+ + + + K ++ A L++
Sbjct: 67 HDSRVTVLEVEIMALKRGLTEAVGLGIDNISIYSDHYRIFELVMEKSASAEENFALLMDN 126
Query: 255 VYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDT 314
V ++++ T P LV R+ +K+ ++LA + IVS E +TC IC +D
Sbjct: 127 VQHIRQRLTSSFPVLVTRNQIKFVYELAMETIVS------EISIHIPDHDKTCSICSDDN 180
Query: 315 -DINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLI 373
+ FSV C H +C CVK+H+EV+LL G VP+C H C+++L +C L KL
Sbjct: 181 FEPELMFSVALCGHEFCVECVKRHIEVRLLAGGVPRCLHYQCESKLTLANCANLLTSKLK 240
Query: 374 ETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICK 433
+ R E SIPV E++YCP PRCS+LMS T++ ++ + + C+KC FC CK
Sbjct: 241 AMWELRIEEESIPVEERVYCPNPRCSSLMSVTKLSNSTREDV-TMRSCVKCGEPFCINCK 299
Query: 434 VPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGY 493
+PWH+ ++C+ YK L PNP A+D+KLK+LA + +WRQC C ++IEL+EGC H+TCRCG+
Sbjct: 300 LPWHSNLSCNDYKSLGPNPTADDIKLKALANQKMWRQCENCKNVIELSEGCMHITCRCGH 359
Query: 494 EFCYQCGAGWKDKKATCS 511
+FCY+CGA W + C+
Sbjct: 360 QFCYKCGAKWITGRVFCT 377
>AT2G21420.1 | Symbols: | IBR domain containing protein |
chr2:9169713-9171746 FORWARD LENGTH=468
Length = 468
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 210/359 (58%), Gaps = 25/359 (6%)
Query: 149 VFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTET-SKKISEAK 207
V+R++FKGLVS++ + E +V G GIAICDEA+ +L + K L G + + + E K
Sbjct: 49 VYRLFFKGLVSDE-TTTDMEEIVKAGFGIAICDEANTLLYNMKKSLNGDDVINPEEVEIK 107
Query: 208 ALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNP 267
ALI N +I M+L+ V+ C + Q L+G+ QQ + LV +V L+ K +
Sbjct: 108 ALICVLNVSIQMELRNVMICCGDYQIFQILTGRGK-PQQNIVHLVEQVQHLRGKLSSTEV 166
Query: 268 RLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGCQH 327
LV R D+ LA +AI ETC IC E+TD ++ F + C H
Sbjct: 167 VLVPRADV---IILAIEAIGG----------------ETCCICRENTDADRMFFTENCFH 207
Query: 328 RYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPV 387
R CFSCV +HV+ LL G+ P C H C +EL ESC K L LIE +++ E +P
Sbjct: 208 RQCFSCVNRHVQRMLLCGISPTCLHFPCNSELTFESCSKVLTPNLIEFWKRKIEEDLVPA 267
Query: 388 TEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYKK 447
+KIYCPY RCS LMSKT + + + CIKC FC CKVP H G++C YKK
Sbjct: 268 ADKIYCPYRRCSMLMSKTALSRETDQ--SNVRACIKCCRLFCIDCKVPSHAGLSCVDYKK 325
Query: 448 LNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGWKDK 506
LNP+ P D+KLKSLA + WRQCV+C++++EL EGC H+TCRCG+EFCY CG W +
Sbjct: 326 LNPD-PLYDVKLKSLANKKKWRQCVQCSNLVELFEGCNHITCRCGFEFCYVCGKEWNQR 383
>AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:15646460-15647566 FORWARD
LENGTH=346
Length = 346
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 198/345 (57%), Gaps = 16/345 (4%)
Query: 147 GAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSKKISEA 206
GA++++YFKG+V E+ +L G G+AI D+ D +L ++ +P+ G++ + +E
Sbjct: 10 GAIYKLYFKGIVIEETSQ------LLAGFGVAIFDQDDKLLFQMKRPIHGSDITVLEAEL 63
Query: 207 KALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCN 266
AL + + + L R+ CD+ + + + G+ Q +A L+N+V ++++ Y N
Sbjct: 64 TALKQGLTETMKLGLDRISICCDHDHIYELVMGRSTPEQDNIAMLMNDVQRMRQQLRYSN 123
Query: 267 PRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDT-DINQFFSVDGC 325
P LV R + +A+KLA + +VS+ + A TC IC + + + FSV C
Sbjct: 124 PILVTRDQISFAYKLAMETVVSEISICMPA---------TCSICFNNVLEAEKMFSVAIC 174
Query: 326 QHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASI 385
H++C CVK ++EVKLL+G VP+C C+++L SC L KL +QR E I
Sbjct: 175 GHQFCVECVKHYIEVKLLEGGVPRCLDYQCESKLTLTSCGNLLTPKLKAIWKQRIEEELI 234
Query: 386 PVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAY 445
V E++YCP PRCS LMSKTE+ ++ + + C+KC FC CKVPWH+ ++C Y
Sbjct: 235 LVAERVYCPNPRCSGLMSKTELSTSTEEDVSTRTCCVKCGEPFCINCKVPWHSNLSCDDY 294
Query: 446 KKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCR 490
K+L PNP D+KLK LA + W QC KC HMI EGC + CR
Sbjct: 295 KRLGPNPTKNDIKLKVLANQQKWSQCAKCQHMIARIEGCNVIICR 339
>AT2G26130.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11127134-11128476 FORWARD LENGTH=398
Length = 398
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 206/365 (56%), Gaps = 20/365 (5%)
Query: 143 SGDPGAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSKK 202
+G P ++R+YFKGLV+E+ + ++L G G+AIC + D++L ++ + +
Sbjct: 9 AGKP--LYRLYFKGLVTEE------KEMLLAGFGVAICGDKDDLLFDLKVSIHDPTITLL 60
Query: 203 ISEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKF 262
E AL N A+ + + + CD+ + + + G Q+ +A L+ +V +++
Sbjct: 61 EVELIALKSGLNQAVSLGINHISICCDHEYIFELVMGISTPKQESIALLLRDVQGIRKYL 120
Query: 263 TYCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDIN--QFF 320
T P ++ ++ A+ A +AI S+ A KETC ICL D DIN Q F
Sbjct: 121 TSSIPVMLTQNQSNLAYDFAIEAISSEIIIDIPAQ------KETCNICLND-DINADQMF 173
Query: 321 SVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRK 380
SVD H C CVK+H+EV+LL+G + CPH C + L + C L KL + +Q+
Sbjct: 174 SVDKSGHMCCSECVKRHIEVRLLEGSLITCPHYRCNSLLTSVRCGNLLTPKLNKMWEQKT 233
Query: 381 VEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGM 440
+ IPV +++YCP PRCS LMS+TE+ S IG ++ C+KC FC CKV WHN +
Sbjct: 234 KDELIPVMDRVYCPNPRCSTLMSETEL---SGLNIGVRRCCVKCGEPFCVKCKVSWHNNL 290
Query: 441 TCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCG 500
+C YK L+PNP D +L+ LA WRQC KC HMIEL+ GC + CRCG+ FCYQCG
Sbjct: 291 SCDEYKTLHPNPTENDGRLRDLANEKSWRQCSKCKHMIELSSGCISVVCRCGHTFCYQCG 350
Query: 501 AGWKD 505
A D
Sbjct: 351 ADAGD 355
>AT2G26135.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr2:11130119-11131514 FORWARD LENGTH=384
Length = 384
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 197/374 (52%), Gaps = 41/374 (10%)
Query: 130 GDNYEKAFGEGCSSGDPGAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLE 189
DN + A G S + + +YFKGLVSE+ +E +AIC D ++ +
Sbjct: 10 ADNLKHA---GTPSPSKFSPYSLYFKGLVSEESPKLSAE------FRVAICGYKDGLMFQ 60
Query: 190 VSKPLLGTETSKKISEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLA 249
+ P+ + + +E AL + A+ + + + CD + + + G+ ++ +A
Sbjct: 61 MKGPIHDSAITLLEAELMALKYGLSEAVTLGINHISICCDNNQIFEWVMGRSTPQEENIA 120
Query: 250 RLVNEVYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVI 309
L+ +V ++++FT L+ D+ F K+TC I
Sbjct: 121 MLIRDVQGIRKQFTSSIAVLI---DVPALFHP----------------------KKTCTI 155
Query: 310 CLEDTDIN--QFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKF 367
C +D DIN F +D C H +C CVK+H+EV LLQG + CP CK++L SC
Sbjct: 156 CFDD-DINADMMFYIDQCGHMFCSECVKRHIEVSLLQGSLITCPSYRCKSKLTYGSCVNI 214
Query: 368 LPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGF 427
L K+ E QR E SIPVT+++YCP P CSALMS TE+ + G+++ C+KC
Sbjct: 215 LTPKVKEMWIQRMGEDSIPVTDRVYCPNPTCSALMSVTEL----DQLTGSKRCCVKCGES 270
Query: 428 FCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHM 487
FC CKVPWH+ ++C YKKL+ N D +L LA + WRQC KC HMIEL +GC +
Sbjct: 271 FCIKCKVPWHDNLSCKRYKKLHSNRTTNDKQLNELANQESWRQCSKCKHMIELTQGCVRV 330
Query: 488 TCRCGYEFCYQCGA 501
CRCG+EFCY CGA
Sbjct: 331 ICRCGHEFCYGCGA 344
>AT3G45470.1 | Symbols: | IBR domain containing protein |
chr3:16680505-16681261 REVERSE LENGTH=222
Length = 222
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 143/221 (64%), Gaps = 5/221 (2%)
Query: 305 ETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESC 364
ETCVICLE+T ++ F +D C HR+C+ CV Q VEVKL G VP C CK +L E+C
Sbjct: 4 ETCVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVPTCLDYECKLKLSLENC 63
Query: 365 RKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKC 424
K L K+IE + E SIP+ ++IYCPY CS LMSKTE+ +K+ + CIKC
Sbjct: 64 FKVLKPKVIELWKHMMKEESIPLAKRIYCPYINCSTLMSKTEISRSNKS---NDRACIKC 120
Query: 425 RGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGC 484
G C CKVPWH+ ++C YKKL+P+P +DL LK LA WRQCVKC H+IEL +GC
Sbjct: 121 SGLVCIDCKVPWHSDLSCAEYKKLHPDPVLDDLTLKLLANDQKWRQCVKCRHLIELNQGC 180
Query: 485 YHMTCRCGYEFCYQCGAGWKDKKATC--SCPLWAEEYLVRG 523
HMTCRCGY+FCY+CG WK + TC CP + Y G
Sbjct: 181 NHMTCRCGYQFCYKCGVEWKKGQVTCPTGCPRTGQGYFYDG 221
>AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16706312-16707649 REVERSE LENGTH=348
Length = 348
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 164/271 (60%), Gaps = 3/271 (1%)
Query: 233 LLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTR 292
L + + G+ + K A L+ +V ++ F P V + YA+KLAR+ IVS+ +
Sbjct: 25 LTEAVMGRCVPEENKTALLMIDVQRIREGFKSSFPIFVEGKRISYAYKLARETIVSEISI 84
Query: 293 SAEAGSSTKSL-KETCVICLED-TDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKC 350
S K+ K TC ICL+D + NQ F V C+HR+C C+++H+EV+LL+G V +C
Sbjct: 85 SVNPPRQPKATRKTTCKICLDDDINENQMFCVGKCRHRFCSDCMRRHIEVRLLEGSVMRC 144
Query: 351 PHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEY 410
PH CK L C L K+ E QQR E IPVT +IYCP RCSALMS+TE L
Sbjct: 145 PHYRCKTTLKFGGCINLLTPKIREMWQQRIKEDLIPVTGRIYCPNSRCSALMSETE-LSI 203
Query: 411 SKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQ 470
S ++ C KC FC CKV WH+ ++C+ YKKLNP P D K+K+LA + WRQ
Sbjct: 204 STKEDEVRRCCFKCGQIFCIKCKVSWHSNLSCNDYKKLNPYPTENDGKIKALANQKRWRQ 263
Query: 471 CVKCNHMIELAEGCYHMTCRCGYEFCYQCGA 501
C KC HMIEL++GC + CRCG++FCY+CG
Sbjct: 264 CGKCQHMIELSKGCVQVKCRCGHKFCYRCGV 294
>AT2G19610.2 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485863 FORWARD LENGTH=418
Length = 418
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 202/361 (55%), Gaps = 15/361 (4%)
Query: 149 VFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSK--KISEA 206
+R+Y KGLVSE+ + ++ VV G+G+++CD D E++K L + + + +E
Sbjct: 49 TYRLYSKGLVSEELIKDDTMLVV--GLGLSLCDSHDYTKQEINKALRNQKLAAHPEAAEL 106
Query: 207 KALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCN 266
A+I A+ + ++R+ ++CD +L +++ K N+ +A+L+ V LLQ +FT C
Sbjct: 107 AAIIHGLKWALELGIERIQFFCDDSNILAYVTRKAAPNESIVAKLLEHVSLLQTRFTSCQ 166
Query: 267 P-RLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGC 325
V+R D+ KLA+DAI SQ TR E + E+C +C N F V GC
Sbjct: 167 ALATVSRDDIVSVIKLAKDAIASQ-TRWCEGDTEY----ESCPVCYAYVSPNDKFEVQGC 221
Query: 326 QHRYCFSCVKQHVEV-KLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEAS 384
HR C +C+++ ++L+G CP+ C+N+L+ E CR F I M QRK E +
Sbjct: 222 FHRICVTCMRKPFSSEQILRGNTAICPYPDCENDLVPEDCRAFADADAITLMIQRKKEKA 281
Query: 385 IPVTEKIYCPYPRCSALMSKTEVLEY-SKNVIGAQ--KQCIKCRGFFCFICKVPWHNGMT 441
IPV +++YCP P CS LMS +++ + SKN ++ ++C++C FC C VPWH T
Sbjct: 282 IPVKDRVYCPNPSCSFLMSDLDLIRHISKNPRHSEEARKCMECGLSFCKKCHVPWHYKKT 341
Query: 442 CHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCR-CGYEFCYQCG 500
C +KK ++ L+S W++C +C +++ GC MTCR C +EFCY CG
Sbjct: 342 CDEFKKSESYLKSDAAILESFVKTQGWKKCSQCQSIVQHGGGCQQMTCRHCKHEFCYTCG 401
Query: 501 A 501
A
Sbjct: 402 A 402
>AT3G45480.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16683263-16684592 REVERSE LENGTH=382
Length = 382
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 190/357 (53%), Gaps = 35/357 (9%)
Query: 150 FRVYFKGLVSEDFVNGESERVVLGGIGIAIC-DEADNVLLEVSKPLLGTETSKKISEAKA 208
+ +YFKG L G G+AI +E D++L + L + + +E A
Sbjct: 19 YNLYFKG--------------SLAGFGVAIYREEDDSILFKKKVSLHYPDFTAWEAELMA 64
Query: 209 LIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNPR 268
L A+ + + + D P + + + G+ +K+A +++EV ++++F+ P
Sbjct: 65 LKLGLTKAVSFRINHISMFFDNPEIFELVMGRSVPKDKKIALIMDEVQRIRQQFSSSIPF 124
Query: 269 LVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLED-TDINQFFSVDGCQH 327
LVA +++K+ +KLA++ +VS S + K+TC C D FS D C H
Sbjct: 125 LVASNEIKFVYKLAKETLVSNI-------SIPRPQKKTCGNCFNDGIKGENMFSADLCSH 177
Query: 328 RYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPV 387
+C C+K+H+EV L +G +P+CPH+GC + L SC L K E ++R E SIPV
Sbjct: 178 YFCVECMKEHIEVSLNEGGLPRCPHDGCTSNLTLRSCDHLLTPKQREMWEKRIKEESIPV 237
Query: 388 TEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYKK 447
++ +CP PRC ALMSKTE+ E S G ++ C KCR FC CKVPWH+ ++C +K
Sbjct: 238 CDRFHCPNPRCWALMSKTELTE-STEEDGVRRCCYKCRKHFCINCKVPWHSNLSCKEHKS 296
Query: 448 LNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGWK 504
P ++WRQC C H I+L+E +TCRCGY+FCY CGA WK
Sbjct: 297 SGREP-----------ITTVWRQCRSCLHKIKLSEERMPVTCRCGYKFCYACGAQWK 342
>AT3G45460.1 | Symbols: | IBR domain containing protein |
chr3:16678680-16680043 REVERSE LENGTH=389
Length = 389
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 197/365 (53%), Gaps = 32/365 (8%)
Query: 142 SSGDPGA-VFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETS 200
S GD + + +YFKGLV E ++ + G +AI E D LL K L T
Sbjct: 20 SPGDFHSDTYNLYFKGLVRE-----KTSAQLSAGFEVAIFREEDEYLLFQMKGSLHDSTV 74
Query: 201 KKI-SEAKALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQ 259
+ +E AL A+ + + + CD L + + G+ ++ +A L+++V ++
Sbjct: 75 TVLEAELMALKRGLTEAVSLGINHISICCDRLELYELVMGRLAPEKENIALLMDDVQCIR 134
Query: 260 RKFTYCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQF 319
R+ T P V + K+AFKLA+++I ++ + + +++
Sbjct: 135 RELTSSIPVTVTENQAKFAFKLAKESISIRTPPTEQKACGEVNIEH-----------ELM 183
Query: 320 FSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQR 379
FSV C+H++ +KQH+EV+L++G VP+CPH+GCK+ L +SC L KL E + R
Sbjct: 184 FSVALCRHQFGVEWMKQHIEVRLIEGDVPRCPHDGCKSILSLKSCSHLLTPKLEEMWEHR 243
Query: 380 KVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNG 439
E IPV ++ +CP PRC ALMSKTE++E +++ G ++ C KCR FC CKV WH+
Sbjct: 244 IKEEFIPVCDRFHCPNPRCWALMSKTELVESTED--GVRRCCFKCRKAFCINCKVLWHSD 301
Query: 440 MTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQC 499
++C YK L NP +++ RQC KC HMI+L+ ++ CRCGY FCY C
Sbjct: 302 LSCKEYKTLGRNP------------KTISRQCKKCQHMIKLSHKTINVYCRCGYSFCYTC 349
Query: 500 GAGWK 504
GA WK
Sbjct: 350 GAQWK 354
>AT2G19610.1 | Symbols: | RING/U-box superfamily protein |
chr2:8484455-8485723 FORWARD LENGTH=397
Length = 397
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 193/349 (55%), Gaps = 14/349 (4%)
Query: 149 VFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSK--KISEA 206
+R+Y KGLVSE+ + ++ VV G+G+++CD D E++K L + + + +E
Sbjct: 49 TYRLYSKGLVSEELIKDDTMLVV--GLGLSLCDSHDYTKQEINKALRNQKLAAHPEAAEL 106
Query: 207 KALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCN 266
A+I A+ + ++R+ ++CD +L +++ K N+ +A+L+ V LLQ +FT C
Sbjct: 107 AAIIHGLKWALELGIERIQFFCDDSNILAYVTRKAAPNESIVAKLLEHVSLLQTRFTSCQ 166
Query: 267 P-RLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGC 325
V+R D+ KLA+DAI SQ TR E + E+C +C N F V GC
Sbjct: 167 ALATVSRDDIVSVIKLAKDAIASQ-TRWCEGDTEY----ESCPVCYAYVSPNDKFEVQGC 221
Query: 326 QHRYCFSCVKQHVEV-KLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEAS 384
HR C +C+++ ++L+G CP+ C+N+L+ E CR F I M QRK E +
Sbjct: 222 FHRICVTCMRKPFSSEQILRGNTAICPYPDCENDLVPEDCRAFADADAITLMIQRKKEKA 281
Query: 385 IPVTEKIYCPYPRCSALMSKTEVLEY-SKNVIGAQ--KQCIKCRGFFCFICKVPWHNGMT 441
IPV +++YCP P CS LMS +++ + SKN ++ ++C++C FC C VPWH T
Sbjct: 282 IPVKDRVYCPNPSCSFLMSDLDLIRHISKNPRHSEEARKCMECGLSFCKKCHVPWHYKKT 341
Query: 442 CHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCR 490
C +KK ++ L+S W++C +C +++ GC MTCR
Sbjct: 342 CDEFKKSESYLKSDAAILESFVKTQGWKKCSQCQSIVQHGGGCQQMTCR 390
>AT5G07640.1 | Symbols: | RING/U-box superfamily protein |
chr5:2414847-2415876 FORWARD LENGTH=316
Length = 316
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 172/314 (54%), Gaps = 15/314 (4%)
Query: 148 AVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTE-TSKKISEA 206
F +Y KGLVSE+ + ES+++ GG G+AICD DN L E++K L G E T ++ +E
Sbjct: 5 TTFWLYCKGLVSEEVIRDESKQI--GGFGVAICDHEDNRLYEMNKVLGGEESTHQQAAEL 62
Query: 207 KALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCN 266
ALI A N A+ +DL RV ++CD +L++++GK N+ +A LV EV LLQ KF++C
Sbjct: 63 AALIHALNWALELDLGRVTFFCDDSNILEYVTGKAEPNESTVATLVKEVSLLQSKFSFCE 122
Query: 267 PRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGCQ 326
V + D+ + KLA+DAI SQ R E ETC +C E ++ F V GC
Sbjct: 123 ALPVMK-DITFVLKLAKDAIASQ-IRWREG----DVYMETCPVCYEHVTSDEKFEVPGCF 176
Query: 327 HRYCFSCVKQHVEVKL-LQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASI 385
HR+CF C+K+ +V L V CP GC +EL E C L K ++ M K + I
Sbjct: 177 HRFCFDCIKKQADVALEFAKPVVNCPSFGCNSELQREDCEGVLKPKQLDRMTMYKKASMI 236
Query: 386 PVTEKIYCPYPRCSALMSKTEVLEYSKNV-----IGAQKQCIKCRGFFCFICKVPWHNGM 440
+ C +M+K +++EY+K + ++C +C FC C+ WH+GM
Sbjct: 237 KAKVLDFVCCTTCDNVMAKPDLIEYTKTFFVDAELSGVRKCTECGYCFCGECRAGWHSGM 296
Query: 441 TCHAYKKLNPNPPA 454
TC Y K N P+
Sbjct: 297 TCEEYFKRESNEPS 310
>AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:16725094-16726116 REVERSE
LENGTH=312
Length = 312
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 168/309 (54%), Gaps = 16/309 (5%)
Query: 150 FRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSKKIS-EAKA 208
+ +YFKGLVSE+ +L G +AICD+ DN+L ++ + + + + E A
Sbjct: 16 YSLYFKGLVSEETTE------LLAGFAVAICDKDDNLLFQMKEQVHDSRVVTLMEVELMA 69
Query: 209 LIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNPR 268
L + + + + YCD+ + + + + Q+ + L+++V ++++ T P
Sbjct: 70 LKRGLTEVVRLGIDHISIYCDHYQIFELVMERSVSEQENILMLMDDVQRIRKRLTSSVPV 129
Query: 269 LV-ARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICLEDT-DINQFFSVDGCQ 326
LV R+ +++ ++LA + IVS E +TC IC D + Q FSV C
Sbjct: 130 LVMTRNQIEFVYELAMETIVS------EIRIDMPDHNKTCSICSGDNIEPEQIFSVALCG 183
Query: 327 HRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIP 386
H +C CVKQH+EVKLL G VP+C H C++ L SC L KL + R E SIP
Sbjct: 184 HEFCMECVKQHIEVKLLSGGVPRCLHYQCESNLTLGSCGNILTSKLKAMWELRIEEESIP 243
Query: 387 VTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYK 446
V E++YCP P CS+LMS T++ ++ + + C+KC FC CK+PWH+ ++C+ YK
Sbjct: 244 VAERVYCPNPLCSSLMSVTKLSNSTREDV-TMRTCVKCGEPFCINCKLPWHSNLSCNDYK 302
Query: 447 KLNPNPPAE 455
L PNP A+
Sbjct: 303 SLGPNPTAD 311
>AT4G19670.2 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 172/365 (47%), Gaps = 23/365 (6%)
Query: 168 ERVVLG----GIGIAICDEADNVLLEVSKPLLGTETSKKISEAKALIEAFNAAIFMDLKR 223
ER LG GIG+ + D L++V K L + ++ AL++ A+ +L
Sbjct: 70 ERGDLGSGYSGIGVVLERSGDLELIQVQKKL-DFYVEESVANYLALMDGLEVALQNNLSS 128
Query: 224 VVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNPRLVARHDLKYAFKLAR 283
VV D L ++ + + L L V +L DL A LA+
Sbjct: 129 VVAVTDSELLYNQITREEQLEIPLLVALRERVLEKTSNLNGFVLKLAPFCDLDEALSLAQ 188
Query: 284 DAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLL 343
A+ S+ K + E C IC ED S+ C H++C C+K +VE K+
Sbjct: 189 VAVGIVSSNL----DGDKPI-ENCSICCEDRQSEMMLSLK-CTHKFCSHCMKTYVEGKVK 242
Query: 344 QGMVP-KCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALM 402
VP +CP CK+ L A C+ FLP ++ ++ V + KIYCPYP CS L+
Sbjct: 243 TSEVPIRCPQVQCKHYLSAAECKSFLPVTTFKSFEEANVCSK--NNGKIYCPYPNCSFLL 300
Query: 403 SKTEVLEYSKNVIGAQK--------QCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPP- 453
E L + + +C C F C C VPWH M+C ++ L +
Sbjct: 301 DPQECLSSGRASSSSSTQSENSCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERY 360
Query: 454 AEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGWKDKKATCSCP 513
+D+ L LA WR+C +C MIELA+GC HMTCRCG+EFCY CGA +++ + TC+C
Sbjct: 361 PDDITLHRLARYKRWRRCQQCRIMIELAQGCNHMTCRCGHEFCYSCGAEYREGQQTCTCA 420
Query: 514 LWAEE 518
W ++
Sbjct: 421 FWDDD 425
>AT4G19670.1 | Symbols: | RING/U-box superfamily protein |
chr4:10699383-10701342 REVERSE LENGTH=532
Length = 532
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 172/365 (47%), Gaps = 23/365 (6%)
Query: 168 ERVVLG----GIGIAICDEADNVLLEVSKPLLGTETSKKISEAKALIEAFNAAIFMDLKR 223
ER LG GIG+ + D L++V K L + ++ AL++ A+ +L
Sbjct: 70 ERGDLGSGYSGIGVVLERSGDLELIQVQKKL-DFYVEESVANYLALMDGLEVALQNNLSS 128
Query: 224 VVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFTYCNPRLVARHDLKYAFKLAR 283
VV D L ++ + + L L V +L DL A LA+
Sbjct: 129 VVAVTDSELLYNQITREEQLEIPLLVALRERVLEKTSNLNGFVLKLAPFCDLDEALSLAQ 188
Query: 284 DAIVSQSTRSAEAGSSTKSLKETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLL 343
A+ S+ K + E C IC ED S+ C H++C C+K +VE K+
Sbjct: 189 VAVGIVSSNL----DGDKPI-ENCSICCEDRQSEMMLSLK-CTHKFCSHCMKTYVEGKVK 242
Query: 344 QGMVP-KCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALM 402
VP +CP CK+ L A C+ FLP ++ ++ V + KIYCPYP CS L+
Sbjct: 243 TSEVPIRCPQVQCKHYLSAAECKSFLPVTTFKSFEEANVCSK--NNGKIYCPYPNCSFLL 300
Query: 403 SKTEVLEYSKNVIGAQK--------QCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPP- 453
E L + + +C C F C C VPWH M+C ++ L +
Sbjct: 301 DPQECLSSGRASSSSSTQSENSCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERY 360
Query: 454 AEDLKLKSLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGWKDKKATCSCP 513
+D+ L LA WR+C +C MIELA+GC HMTCRCG+EFCY CGA +++ + TC+C
Sbjct: 361 PDDITLHRLARYKRWRRCQQCRIMIELAQGCNHMTCRCGHEFCYSCGAEYREGQQTCTCA 420
Query: 514 LWAEE 518
W ++
Sbjct: 421 FWDDD 425
>AT3G45555.1 | Symbols: | RING/U-box protein |
chr3:16712368-16713009 REVERSE LENGTH=213
Length = 213
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 117/187 (62%), Gaps = 5/187 (2%)
Query: 305 ETCVICL-EDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAES 363
ETC IC +D Q + V C H++C C+K+++EV+LL+G V CP+ C+++L +S
Sbjct: 15 ETCSICFNDDFKSEQMYYVALCNHKFCLECMKRYIEVRLLEGTVLICPYYQCESKLTLKS 74
Query: 364 CRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVI-GAQKQCI 422
C L KL +Q+ E SIPVTE+ YCP PRCSALMSK E+ SK+ + +C
Sbjct: 75 CFHILTSKLKAMWEQKIEEESIPVTERFYCPNPRCSALMSKIEL---SKSTLEDGFVRCF 131
Query: 423 KCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAE 482
+C FC CKV W + ++C KKL NP ++D LK LA WRQC KC HMI+L+E
Sbjct: 132 QCGERFCINCKVSWQSNLSCDNCKKLGNNPTSDDKMLKVLANEKKWRQCEKCQHMIKLSE 191
Query: 483 GCYHMTC 489
GC H+TC
Sbjct: 192 GCIHVTC 198
>AT3G45510.1 | Symbols: | RING/U-box protein |
chr3:16690790-16691728 REVERSE LENGTH=257
Length = 257
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 7/204 (3%)
Query: 244 NQQKLARLVNEVYLLQRKFTYCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSL 303
+ +K A L+++V+ ++++FT+ P LV + +KLA++ +VS++ R +
Sbjct: 7 HHEKFALLMDDVHRIRQQFTFSIPILVTGKQANFTYKLAKETLVSRNIRPMPRTTQ---- 62
Query: 304 KETCVIC-LEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAE 362
K+TC IC ++D + + FS C H +C C+KQ +EV L +G VP+CP GCK+ L
Sbjct: 63 KKTCGICFVDDIEGQEMFSAALCSHYFCVECMKQRIEVSLNEGGVPRCPRHGCKSALTLR 122
Query: 363 SCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCI 422
SC L K E +QR E SIPV + +CP P+C ALMSKTE+ E + + G ++ C
Sbjct: 123 SCDHLLTPKQREMWEQRIKEESIPVCNRFHCPNPKCWALMSKTELTESTDD--GVRRCCS 180
Query: 423 KCRGFFCFICKVPWHNGMTCHAYK 446
KCR FC C V WH+ ++C YK
Sbjct: 181 KCRKPFCIDCNVSWHSNLSCKEYK 204
>AT3G53690.1 | Symbols: | RING/U-box superfamily protein |
chr3:19898997-19900044 REVERSE LENGTH=320
Length = 320
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 7/221 (3%)
Query: 292 RSAEAGSSTKSLKETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVP-KC 350
R SS+K+ C IC++ I + F + GC H YC CV +++ KL ++ +C
Sbjct: 100 REKGQSSSSKTATFDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIEC 159
Query: 351 PHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEY 410
P GC L + CR+ LP ++ + EA + ++K YCPY CSAL+ LE
Sbjct: 160 PVSGCSGRLEPDQCRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALV----FLEE 215
Query: 411 SKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPA-EDLKLKSLATRSLWR 469
S+ V +C C C C WH MTC ++KL N +D+ L ++A + W+
Sbjct: 216 SE-VKMKDSECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATMAKQKKWK 274
Query: 470 QCVKCNHMIELAEGCYHMTCRCGYEFCYQCGAGWKDKKATC 510
+C C IE ++GC +M CRCG FCY CG +D C
Sbjct: 275 RCPSCKFYIEKSQGCLYMKCRCGLAFCYNCGTPSRDHTHYC 315
>AT3G45560.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:16719630-16722674 REVERSE
LENGTH=503
Length = 503
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 147/285 (51%), Gaps = 20/285 (7%)
Query: 146 PGAVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSKKISE 205
P + R+YFKG VSE+ G G+AICD+ D +L + K +++ + E
Sbjct: 8 PFHMNRLYFKGFVSEE----------TKGFGVAICDQEDKLLYHI-KGSRHHDSAITVLE 56
Query: 206 AK--ALIEAFNAAIFMDLKRVVYYCDYPPLLQHLSGKWPVNQQKLARLVNEVYLLQRKFT 263
A+ AL A+ + + + +YCD+ + + + G Q +A L+++V ++++FT
Sbjct: 57 AELTALKRGLIEAVGLGINHISFYCDHDQIFELVMGISVPEQDNIALLMDDVQRIRKQFT 116
Query: 264 YCNPRLVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICL-EDTDINQFFSV 322
P L+ R+ K+A+KLA + IVS+ + S ++TC IC +D FSV
Sbjct: 117 SSIPVLMTRNQAKFAYKLAMETIVSEISIDM-----APSQRKTCGICFNDDFKAEHMFSV 171
Query: 323 DGCQHRYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVE 382
D C H++C C+ Q+++V+LL+ +CPH C+++L C L +L E + R +
Sbjct: 172 DLCGHQFCVECMTQYIKVRLLEESEMRCPHYQCESKLTVVRCANLLTPELREMWEHRSQK 231
Query: 383 ASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGF 427
S+ V +K YC C+ L+ + E + + +V+ K RG
Sbjct: 232 ESVVVADKAYCQI-ECAWLLCQMEFRDGALDVVSLIASAAKFRGI 275
>AT3G14250.1 | Symbols: | RING/U-box superfamily protein |
chr3:4745963-4746958 REVERSE LENGTH=303
Length = 303
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 304 KETCVICLEDTDINQFF-SVDGCQHRYCFSCVKQHVEVKLLQGMVP-KCPHEGCKNELLA 361
+ C+IC+++ + F C H YC C ++V K+ + KCP C +
Sbjct: 92 RRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEP 151
Query: 362 ESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQC 421
+CR +P + + ++ E+ I +K YCP+ CSA+M E + + Q +C
Sbjct: 152 YTCRDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNE----NGDANVTQTEC 207
Query: 422 IKCRGFFCFICKVPWHNGMTCHAYKKLN----PNPPAEDLKLKSLATRSLWRQCVKCNHM 477
C FC CKV WH G+ C +++ + +D L +A WR+C C
Sbjct: 208 RSCHRLFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCPSCKFY 267
Query: 478 IELAEGCYHMTCRCGYEFCYQCGAGWKDKKA 508
++ EGC H+ CRCGY+FCY CG+ W A
Sbjct: 268 VDKVEGCQHIKCRCGYQFCYGCGSVWSSSHA 298
>AT3G45490.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: RING/U-box superfamily protein (TAIR:AT2G25370.1);
Has 99 Blast hits to 96 proteins in 10 species: Archae -
0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 97;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:16687066-16687838 REVERSE LENGTH=211
Length = 211
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 14/148 (9%)
Query: 148 AVFRVYFKGLVSEDFVNGESERVVLGGIGIAICDEADNVLLEVSKPLLGTETSKKISEAK 207
V R+Y KGLVS D V G G+AICD+ D +L E+ + + E K +
Sbjct: 29 VVHRLYSKGLVSTDNVAA--------GFGVAICDQMDELLFEMKESVSDVEGVK----VR 76
Query: 208 ALIEAFNAAIFMDLKRVVYYCDYPPLLQHL-SGKWPVNQQKLAR-LVNEVYLLQRKFTYC 265
ALI + ++ + ++++V YCD L Q++ SGK Q K+ + L+ EV L+ KF
Sbjct: 77 ALIRGLSESLDLGIRKIVIYCDDNELYQNITSGKCKPKQIKVVKQLIKEVQRLREKFASS 136
Query: 266 NPRLVARHDLKYAFKLARDAIVSQSTRS 293
LVA +D+K+AF+LAR+AIVSQ+T +
Sbjct: 137 EAILVAENDIKFAFELAREAIVSQTTSA 164
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 286 IVSQSTRSAEA-GSSTKSLKETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKL-- 342
+V++ R A G ++ C ICL + D +S++GC H +C +C+ + E +
Sbjct: 1542 MVNELAREKSALGEKPDEIEVECPICLSEVD--DGYSLEGCSHLFCKACLLEQFEASMRN 1599
Query: 343 LQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKIY--CPYPRCSA 400
C H C ++ R L + ++ + + + + ++ + C P C +
Sbjct: 1600 FDAFPILCSHIDCGAPIVLADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPS 1659
Query: 401 LMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLK 460
+ E + I C C C C + +H +TC YKK NP DL LK
Sbjct: 1660 VYRVAGPQESGEPFI-----CGACHSEICTRCHLEYHPLITCERYKKFKENP---DLSLK 1711
Query: 461 SLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQC 499
A ++C C IE +GC HM CRCG C+ C
Sbjct: 1712 DWAKGKNVKECPICKSTIEKTDGCNHMKCRCGKHICWTC 1750
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related |
chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 286 IVSQSTRSAEA-GSSTKSLKETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKL-- 342
+V++ R A G ++ C ICL + D +S++GC H +C +C+ + E +
Sbjct: 1539 MVNELAREKSALGEKPDEIELECPICLSEVDDG--YSLEGCSHLFCKACLLEQFEASMRN 1596
Query: 343 LQGMVPKCPHEGCKNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKI--YCPYPRCSA 400
C H C ++ R L + ++ + + A + ++ +C P C +
Sbjct: 1597 FDAFPILCSHIDCGAPIVVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPS 1656
Query: 401 LMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLK 460
+ E + I C C C C + +H +TC YKK NP DL LK
Sbjct: 1657 IYRVAGPQESGEPFI-----CGACHSETCTRCHLEYHPLITCERYKKFKENP---DLSLK 1708
Query: 461 SLATRSLWRQCVKCNHMIELAEGCYHMTCRCGYEFCYQC 499
A ++C C IE +GC H+ CRCG C+ C
Sbjct: 1709 DWAKGKDVKECPICKSTIEKTDGCNHLQCRCGKHICWTC 1747
>AT3G43180.1 | Symbols: | RING/U-box superfamily protein |
chr3:15178043-15178937 FORWARD LENGTH=191
Length = 191
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 269 LVARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCVICL-EDTDINQFFSVDGCQH 327
LV + K +KLA +A V + + A C IC ED Q +SV C H
Sbjct: 30 LVTENQNKSFYKLAMEAGVPEISIHMPA---------ICRICFDEDVKAEQMYSVALCGH 80
Query: 328 RYCFSCVKQHVEVKLLQGMVPKCPHEGCKNELLAESCRKFLPHK 371
++C CVKQH+E +LL+G VP+CPH+ C+ +L SC L K
Sbjct: 81 QFCVDCVKQHIESRLLEGCVPRCPHDQCEYKLTFRSCANLLTPK 124
>AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein |
chr1:1779631-1784166 FORWARD LENGTH=594
Length = 594
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 16/206 (7%)
Query: 306 TCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGCKNELLAE 362
TC IC + + + SV C H +C +C ++ + G ++ KCP C + +
Sbjct: 173 TCGICFDSYTLEEIVSV-SCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRD 231
Query: 363 SCRKFLPHKLIETMQQRKVEASIPVTEKI-YCPYPRCSALMSKTEVLEYSKNVIGAQKQC 421
K + E + + + + V ++ +CP P C ++++ C
Sbjct: 232 MIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCE------HAIDFAGGTESYDVSC 285
Query: 422 IKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELA 481
+ C FC+ C H + C K AE + + S + C KC IE
Sbjct: 286 L-CSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS--KPCPKCKRPIEKN 342
Query: 482 EGCYHMTCR--CGYEFCYQCGAGWKD 505
GC HMTC C +EFC+ C W +
Sbjct: 343 HGCMHMTCTPPCKFEFCWLCLNAWTE 368
>AT1G05890.1 | Symbols: ARI5, ATARI5 | RING/U-box superfamily
protein | chr1:1779631-1784166 FORWARD LENGTH=552
Length = 552
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 16/206 (7%)
Query: 306 TCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGCKNELLAE 362
TC IC + + + SV C H +C +C ++ + G ++ KCP C + +
Sbjct: 131 TCGICFDSYTLEEIVSV-SCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRD 189
Query: 363 SCRKFLPHKLIETMQQRKVEASIPVTEKI-YCPYPRCSALMSKTEVLEYSKNVIGAQKQC 421
K + E + + + + V ++ +CP P C ++++ C
Sbjct: 190 MIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCE------HAIDFAGGTESYDVSC 243
Query: 422 IKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELA 481
+ C FC+ C H + C K AE + + S + C KC IE
Sbjct: 244 L-CSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS--KPCPKCKRPIEKN 300
Query: 482 EGCYHMTCR--CGYEFCYQCGAGWKD 505
GC HMTC C +EFC+ C W +
Sbjct: 301 HGCMHMTCTPPCKFEFCWLCLNAWTE 326
>AT1G65430.1 | Symbols: ARI8, ATARI8 | IBR domain-containing protein
| chr1:24301165-24306159 REVERSE LENGTH=567
Length = 567
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 22/208 (10%)
Query: 307 CVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGCKNELLAES 363
C IC E T ++ C H +C SC + ++ + G + +CP C+ + +
Sbjct: 128 CGICFE-TFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVGQDM 186
Query: 364 CRKFLPHKLIETMQQRKVEASIPVTEKI-YCPYPRCSALMSKTEVLEYSKN-VIGAQKQC 421
P K + V + + K +CP P C +Y+ N V+G+
Sbjct: 187 INLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGC----------DYAVNFVVGSGNYD 236
Query: 422 IKCR--GFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIE 479
+ CR FC+ C H + C K AE + + S + C KC IE
Sbjct: 237 VNCRCCYSFCWNCAEEAHRPVDCDTVSKWVLKNSAESENMNWILANS--KPCPKCKRPIE 294
Query: 480 LAEGCYHMTCR--CGYEFCYQCGAGWKD 505
+GC H+TC C +EFC+ C W +
Sbjct: 295 KNQGCMHITCTPPCKFEFCWLCLGAWTE 322
>AT3G27710.1 | Symbols: ARI3, ARARI3 | RING/U-box superfamily
protein | chr3:10269304-10270917 FORWARD LENGTH=537
Length = 537
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 298 SSTKSLKETCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQGMVPK--CPHEGC 355
+S K++K C +C+ED + + C HR+C C H VK+ +G + C C
Sbjct: 114 TSKKTMK--CDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHEC 171
Query: 356 KNELLAESCRKFLPHKLIETMQQRKVEASIPVTEKI-YCPY-PRCSALMSKTEVLEYSKN 413
K + RK + +L + + +E+ + + +CP P C + + K +E +
Sbjct: 172 KAICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRK---IEDGHD 228
Query: 414 VIGAQKQCIKCRGF-FCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCV 472
V+ C G FCF C H+ +C +K E + + + + C
Sbjct: 229 VVEVGCSC----GLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITVNT--KLCP 282
Query: 473 KCNHMIELAEGCYHMTCRCGYEFCYQCGAG 502
KC+ I+ +GC MTC+CG FC+ CG
Sbjct: 283 KCSKPIQKRDGCNLMTCKCGQHFCWLCGQA 312
>AT2G31510.1 | Symbols: ARI7, ATARI7 | IBR domain-containing protein
| chr2:13416991-13421170 REVERSE LENGTH=562
Length = 562
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 16/206 (7%)
Query: 306 TCVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGCKNELLAE 362
TC IC + + SV C H +C +C ++ + G ++ +CP C + +
Sbjct: 136 TCGICFDSYPPEKIASV-SCGHPFCTTCWTGYISTTINDGPGCLMLRCPDPSCLAAVGHD 194
Query: 363 SCRKFLPHKLIETMQQRKVEASIPVTEKI-YCPYPRCSALMSKTEVLEYSKNVIGAQKQC 421
K E + + + I K+ +CP P C +++ C
Sbjct: 195 MVDKLASEDEKEKYNRYFLRSYIEDNRKMKWCPAPGCDF------AIDFVAGSGNYDVSC 248
Query: 422 IKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELA 481
+ C FC+ C H + C K AE + + S + C +C IE
Sbjct: 249 L-CSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANS--KPCPRCKRPIEKN 305
Query: 482 EGCYHMTCR--CGYEFCYQCGAGWKD 505
+GC HMTC C YEFC+ C W D
Sbjct: 306 QGCMHMTCTPPCKYEFCWLCLGAWMD 331
>AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily
protein | chr2:13511579-13513550 FORWARD LENGTH=543
Length = 543
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 105/270 (38%), Gaps = 24/270 (8%)
Query: 254 EVYLLQRKFTYCNPRL-----VARHDLKYAFKLARDAIVSQSTRSAEAGSSTKSLKETCV 308
EV +L + +C ++ ++ A L ++ +V E + + C
Sbjct: 72 EVIVLLLHYNWCVSKVEDEWFTDEERIRKAVGLLKEPVVD--FNGGEKDKKCRKVNIQCG 129
Query: 309 ICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGCKNELLAESCR 365
IC E + V C H YC +C ++ K+ G + KCP C + +
Sbjct: 130 ICFESYTREEIARV-SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDMIE 188
Query: 366 KFLPHKLIETMQQRKVEASIPVTEKI-YCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKC 424
K+ E + + + + +KI +CP P C +E+ + + C
Sbjct: 189 DVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGY------AVEFGGSESSSYDVSCLC 242
Query: 425 RGFFCFICKVPWHNGMTCHAYKK-LNPNPPAEDLKLKSLATRSLWRQCVKCNHMIELAEG 483
FC+ C H+ + C K + N + K LA + C +C IE +G
Sbjct: 243 SYRFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANS---KPCPECKRPIEKNDG 299
Query: 484 CYHMTCR--CGYEFCYQCGAGWKDKKATCS 511
C HMTC CG+EFC+ C ++ C+
Sbjct: 300 CNHMTCSAPCGHEFCWICLKAYRRHSGACN 329
>AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily
protein | chr2:13508493-13510390 FORWARD LENGTH=514
Length = 514
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 25/212 (11%)
Query: 307 CVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGC----KNEL 359
C IC E + SV C H YC +C ++ K+ G + KCP C ++
Sbjct: 121 CGICFESYTRKEIASV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 179
Query: 360 LAESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQK 419
+ E K K + VE + +CP P C +E+ ++ G
Sbjct: 180 IDEVTEKKDKDKYYRYFLRSYVEDGKKMK---WCPSPGCEC------AVEFGESS-GYDV 229
Query: 420 QCIKCRGFFCFICKVPWHNGMTCHAYKK-LNPNPPAEDLKLKSLATRSLWRQCVKCNHMI 478
C+ C FC+ C H+ + C K + N + K LA + C KC I
Sbjct: 230 ACL-CSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANS---KPCPKCKRPI 285
Query: 479 ELAEGCYHMTC--RCGYEFCYQCGAGWKDKKA 508
E + GC HMTC CG+ FC+ CG + D A
Sbjct: 286 EKSHGCNHMTCSASCGHRFCWICGKSYSDHYA 317
>AT1G32340.1 | Symbols: NHL8 | NDR1/HIN1-like 8 |
chr1:11663462-11666037 REVERSE LENGTH=688
Length = 688
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 55/263 (20%)
Query: 277 YAFKLARDAIVSQSTRSAEAG--------------SSTKSLKETCVICLEDTDINQFFSV 322
Y +RD +RS ++ S +SL E C+ E I+ F
Sbjct: 335 YGVTCSRDKRAVSGSRSPDSDIPYIRSYDDEKRHDSFLQSLHECCICFSESAGID--FVK 392
Query: 323 DGCQHRYCFSCVKQHVEVKLLQGMVP--KCPHEGCKNELLAESCRKFLPHKLIET----M 376
CQH +C C+K + ++ + +G V KCP C + ++ L + E M
Sbjct: 393 LPCQHFFCLKCMKTYTDIHVTEGTVNKLKCPDSKCGETVPPGILKRLLGDEAYERWETLM 452
Query: 377 QQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQKQCIKCRGFFCFICKVPW 436
Q+ +E+ +T+ YC PRC +T +E + + C KC FC +CK
Sbjct: 453 LQKTLES---MTDVAYC--PRC-----ETPCIEDEEQLA----LCFKCYFSFCTLCKEKR 498
Query: 437 HNGMTCHA--------YKKLNPNPPAEDLKLKS-------LATRSLW---RQCVKCNHMI 478
H G+ C + ++ + + E+ + K ++ + + +QC C I
Sbjct: 499 HVGVACMSPELRLQILQERQDSSRLGEEQRRKEKEMINEIMSVKVIMKSAKQCPSCKIAI 558
Query: 479 ELAEGCYHMTC-RCGYEFCYQCG 500
GC M C CG FCY+C
Sbjct: 559 SRTGGCNKMVCNNCGQYFCYRCN 581
>AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily
protein | chr2:13515199-13517142 FORWARD LENGTH=443
Length = 443
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 78/211 (36%), Gaps = 21/211 (9%)
Query: 307 CVICLEDTDINQFFSVDGCQHRYCFSCVKQHVEVKLLQG---MVPKCPHEGC----KNEL 359
C IC E + V C H YC +C ++ K+ G + KCP C ++
Sbjct: 139 CGICFESYTRKEIARV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDM 197
Query: 360 LAESCRKFLPHKLIETMQQRKVEASIPVTEKIYCPYPRCSALMSKTEVLEYSKNVIGAQK 419
+ E K K + VE + +CP P C +E+ N +
Sbjct: 198 IDEVTEKKDKDKYYRYFLRSYVEDGKKMK---WCPSPGCEY------AVEFGVNGSSSYD 248
Query: 420 QCIKCRGFFCFICKVPWHNGMTCHAYKKLNPNPPAEDLKLKSLATRSLWRQCVKCNHMIE 479
C FC+ C H+ + C K E + + ++ + C KC IE
Sbjct: 249 VSCLCSYKFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKT--KPCPKCKRPIE 306
Query: 480 LAEGCYHMTCR--CGYEFCYQCGAGWKDKKA 508
GC HM+C C + FC+ C D KA
Sbjct: 307 KNTGCNHMSCSAPCRHYFCWACLQPLSDHKA 337