Miyakogusa Predicted Gene

Lj0g3v0097449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097449.1 tr|A9TYR9|A9TYR9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=YDG1501 PE=4
SV=1,45.61,1e-18,coiled-coil,NULL; seg,NULL,CUFF.5438.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45600.1 | Symbols: GAS41, TAF14B | YEATS family protein | ch...   153   2e-38
AT5G45600.2 | Symbols: GAS41 | YEATS family protein | chr5:18488...   153   2e-38
AT2G18000.2 | Symbols: TAF14 | TBP-associated factor 14 | chr2:7...   103   3e-23
AT2G18000.1 | Symbols: TAF14 | TBP-associated factor 14 | chr2:7...    61   2e-10

>AT5G45600.1 | Symbols: GAS41, TAF14B | YEATS family protein |
           chr5:18488059-18489666 FORWARD LENGTH=268
          Length = 268

 Score =  153 bits (387), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 84/113 (74%)

Query: 1   MTTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKG 60
           +T KKPVVVE YDEIVFPDPSE+FL+RVQ HPA+  PRLP+G  LP P+ VED  K+++G
Sbjct: 152 LTMKKPVVVESYDEIVFPDPSESFLARVQNHPALTFPRLPSGYNLPAPMQVEDTGKKKRG 211

Query: 61  DTKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQQFKS 113
           DTKDHSL QWF +FSEADE             HIAKLRRQISL++GQ Q  K+
Sbjct: 212 DTKDHSLGQWFMSFSEADELLQLAAARQQVQAHIAKLRRQISLLEGQNQTVKT 264


>AT5G45600.2 | Symbols: GAS41 | YEATS family protein |
           chr5:18488059-18489666 FORWARD LENGTH=267
          Length = 267

 Score =  153 bits (386), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 84/113 (74%)

Query: 1   MTTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKG 60
           +T KKPVVVE YDEIVFPDPSE+FL+RVQ HPA+  PRLP+G  LP P+ VED  K+++G
Sbjct: 151 LTMKKPVVVESYDEIVFPDPSESFLARVQNHPALTFPRLPSGYNLPAPMQVEDTGKKKRG 210

Query: 61  DTKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQQFKS 113
           DTKDHSL QWF +FSEADE             HIAKLRRQISL++GQ Q  K+
Sbjct: 211 DTKDHSLGQWFMSFSEADELLQLAAARQQVQAHIAKLRRQISLLEGQNQTVKT 263


>AT2G18000.2 | Symbols: TAF14 | TBP-associated factor 14 |
           chr2:7829035-7830580 FORWARD LENGTH=268
          Length = 268

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 69/113 (61%)

Query: 2   TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKGD 61
           + K PVV E Y+E+VFPDP E+F++RV  HPA+ +  +P G+ LPPP   +      KGD
Sbjct: 151 SIKIPVVAESYNEVVFPDPFESFVARVHNHPAIQISNIPDGLNLPPPGVADTYYLMEKGD 210

Query: 62  TKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQQFKST 114
           TK+H L+ WF  FSE +E              IAKL+RQ+ ++DGQ +  +S+
Sbjct: 211 TKEHPLSPWFLKFSEVEELFKLTAARQKVQADIAKLKRQLIMVDGQPEGLESS 263


>AT2G18000.1 | Symbols: TAF14 | TBP-associated factor 14 |
           chr2:7829035-7830059 FORWARD LENGTH=202
          Length = 202

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 2   TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPP 48
           + K PVV E Y+E+VFPDP E+F++RV  HPA+ +  +P G+ LPPP
Sbjct: 151 SIKIPVVAESYNEVVFPDPFESFVARVHNHPAIQISNIPDGLNLPPP 197