Miyakogusa Predicted Gene

Lj0g3v0097149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097149.1 CUFF.5496.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57870.2 | Symbols: eIFiso4G1 | MIF4G domain-containing prote...   148   2e-36
AT5G57870.1 | Symbols: eIFiso4G1 | MIF4G domain-containing prote...   144   4e-35
AT2G24050.1 | Symbols: eIFiso4G2 | MIF4G domain-containing prote...    60   7e-10

>AT5G57870.2 | Symbols: eIFiso4G1 | MIF4G domain-containing protein
           / MA3 domain-containing protein | chr5:23439755-23443433
           FORWARD LENGTH=776
          Length = 776

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 3/140 (2%)

Query: 40  RPHGAA-LPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETXXXXXXXXXXXXAELLGE 98
           RPHG A   +F  K GDSRF+GRER++YTR+QLL+L+E  +             AEL GE
Sbjct: 45  RPHGGAPASSFPFKGGDSRFDGRERVKYTREQLLELKETTQLSDEILRVQRETAAELFGE 104

Query: 99  DQTWGRSENNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENRE--FSNASQV 156
           + TW R E+  P Q  +R+SEPD+RDWR RS Q P + +ERSWDNL+E ++  +  ASQ 
Sbjct: 105 EGTWARGESVVPVQSASRFSEPDSRDWRSRSTQPPPSGEERSWDNLREAKDSRYVEASQY 164

Query: 157 NRQDQQNSQYGRAQISSNQG 176
           NRQDQ NSQ+ RA ISSNQG
Sbjct: 165 NRQDQPNSQFSRANISSNQG 184


>AT5G57870.1 | Symbols: eIFiso4G1 | MIF4G domain-containing protein
           / MA3 domain-containing protein | chr5:23439755-23443433
           FORWARD LENGTH=780
          Length = 780

 Score =  144 bits (362), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/144 (52%), Positives = 95/144 (65%), Gaps = 7/144 (4%)

Query: 40  RPHGAA-LPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETXXXXXXXXXXXXAELLGE 98
           RPHG A   +F  K GDSRF+GRER++YTR+QLL+L+E  +             AEL GE
Sbjct: 45  RPHGGAPASSFPFKGGDSRFDGRERVKYTREQLLELKETTQLSDEILRVQRETAAELFGE 104

Query: 99  DQTWGRSE----NNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENRE--FSN 152
           + TW R E    N  P Q  +R+SEPD+RDWR RS Q P + +ERSWDNL+E ++  +  
Sbjct: 105 EGTWARGESVVSNLVPVQSASRFSEPDSRDWRSRSTQPPPSGEERSWDNLREAKDSRYVE 164

Query: 153 ASQVNRQDQQNSQYGRAQISSNQG 176
           ASQ NRQDQ NSQ+ RA ISSNQG
Sbjct: 165 ASQYNRQDQPNSQFSRANISSNQG 188


>AT2G24050.1 | Symbols: eIFiso4G2 | MIF4G domain-containing protein
           / MA3 domain-containing protein | chr2:10225500-10228456
           REVERSE LENGTH=747
          Length = 747

 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 62  ERIRYTRDQLLQLREAVETXXXXXXXXXXXXAELLGEDQTWG--RSENNPPQQVQNRYSE 119
           ER+R++R+++LQ RE+V+              EL GE+Q+WG   +E+      Q+R++E
Sbjct: 55  ERVRFSREEILQHRESVQVSDEILRRCKEIAVELFGEEQSWGNHAAESKITNHTQHRHTE 114

Query: 120 PDNRDWRGRSGQLPANADERSWDNLKENR 148
            DNRDW  RS Q+P +  E   D+ +E +
Sbjct: 115 TDNRDWHSRS-QIPTSGKEWLRDDPREAK 142